RchiOBHm_Chr5g0024791

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000192
Physical Location & Seq
Reverse (-)
18862940 .. 18866191
3252 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30451

Sequence Viewer

Length: 1551 bp
ATGGAGCTGGACTACTTAATCCTTGCTGTGCTCGTCTTTGTTTCTCTTTACTATCTTTTTCGTTTGTTGAATGTTAATATTAAATCCAGGCTTAAGCGCGACAGTGGCACCAAAAGTGAACTACTAGGGCTTGAGCTACCACCAGGAAGCACCGGTTGGCCGATCATCGGCGAAACCCTCGAGTATCTACGCACAGCAAAACAGGGTGTCCCTGAAAAGTTCATAGCAGACAGGAGAAACAAGCACTCGTCATCATTATCATGCAAGGTTTTCAAGACCTCTTTGCTACGCGAATCTATGGCCGTGCTGTGCACTGCTGCAGGGAACAAATTTCTGTTTTCGAACGAGAACAAACTGGTCAAGTCTTGGTGGCCTGCAAACTTTGAGAAGATCTTTGCCAACACTGAGAAAACAGACACCACCCAAGAGTCGATTCGGTTGCGCAAAGTCTTGTCCCCATTTCTCAAGCCTGATGCTCTTCACAGGTACATAGGGGTCATGGACGAGGTCACCAAACAACATCTGGACTTGTATTGGTCATCCTCCTCTTCCTCGTCGGTTGATTATGTAAAAGAAAAGGATCAGAAAGTGATTATCATAGTCTACCCATTAGCCAAGAAGTACACCTTCACTTTAGCATGTAGACTCTTCTTAAACATTGAGGATCCAAAGCTAGTTGCCAAACTAGAGGAGTCAATTCGGCATATATCTTCGGGCTTCATTTCGCTACCAATAGATTTGCCAGGCACGAAATTCAACCGAGCCATTCGAGCATCCAAGCAAATCAAGAAGGAAATTGAGGAGATGGTTAAGCAGAGGAGGACAGATCTACATCTTCATCTTTTGGAGACTAGTAGTAACCATCATCAAGATTTGTTGTCTAGGTTGCTCATGGAGACATATAGCGATGGGAAAGAGCTGATGAAGGAATCAGACATTGCCAACAAGTTGTATGGTCTAATAGTCGGTGCTTACGACAATATAAGTACCACCTTGGTGTCGATTATCATGTTTCTGTCGCAGCTTCCTCATGTTTATGATGCCGTCCTTAAAGAGCAAATGGAGATTGCAGAATCAAAGGCAGAAGGGGAGTTGCTGAACTGGGATGACTTGCAGAAGATGAAATATTCATGGAGCGTGGCATGTGAAGCATTGAGATTGTTGCCACCAATTCTCGGAACTTTTAGAGAGGCCATTACCGACTTTGCGTACGAAGGATACATGATTCCAAAAGGAATGAAGTTACACTGGAATATGTATGCCACACATAAAAACCCGGAATACTTCCCAGATCCAGAGAAGTTCGACCCGTCAAGGTTCCAAGGACAAGGACCAGCTCCTTATTCATATGTTCCTTTTGGAGGAGGACCTCGAATGTGTCCAGGAAAAGAATATGCTCGGTTCAAGATATTGGTTTTCATGCATAATGTTGTCACTAGATTTAAATGGGAGATGGTTTTTCCAGACGAAAAAATGATCATGGACCCGGTTCTTATTCCTACAAAAGGACTTCCTATTCGCCTTTTTCCTCATCAATCATCATCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

516

Amino Acids

59.25

Weight (kDa)

8.9

Isoelectric Point (pI)

50.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 503 6.1e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 443
AccB1I GGYRCC 1 cut(s) 107
AccI GTMKAC 2 cut(s) 603, 643
AccII CGCG 2 cut(s) 99, 291
AclWI GGATC 4 cut(s) 588, 659, 672, 1286
AcoI YGGCCR 2 cut(s) 158, 300
AcsI RAATTY 2 cut(s) 329, 752
AfaI GTAC 4 cut(s) 488, 623, 988, 1211
AfiI CCNNNNNNNGG 4 cut(s) 167, 1175, 1361, 1505
AflII CTTAAG 1 cut(s) 92
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 4 cut(s) 70, 274, 757, 1405
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 4 cut(s) 86, 142, 742, 1381
AjuI GAANNNNNNNTTGG 4 cut(s) 139, 171, 417, 449
AleI CACNNNNGTG 1 cut(s) 995
AluBI AGCT 6 cut(s) 7, 136, 673, 919, 1024, 1337
AluI AGCT 6 cut(s) 7, 136, 673, 919, 1024, 1337
Alw21I GWGCWC 2 cut(s) 33, 314
Alw26I GTCTC 2 cut(s) 842, 890
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 4 cut(s) 588, 659, 672, 1286
Ama87I CYCGRG 1 cut(s) 179
AoxI GGCC 4 cut(s) 158, 300, 371, 1191
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 2 cut(s) 317, 1021
ApoI RAATTY 2 cut(s) 329, 752
ArsI GACNNNNNNTTYG 2 cut(s) 1500, 1532
AsiGI ACCGGT 1 cut(s) 152
AspLEI GCGC 2 cut(s) 99, 444
AspS9I GGNCC 3 cut(s) 1331, 1367, 1483
AsuC2I CCSGG 2 cut(s) 1277, 1487
AsuHPI GGTGA 1 cut(s) 502
AsuII TTCGAA 1 cut(s) 341
AvaI CYCGRG 1 cut(s) 179
AvaII GGWCC 3 cut(s) 1331, 1367, 1483
BaeGI GKGCMC 1 cut(s) 314
BamHI GGATCC 1 cut(s) 664
BanI GGYRCC 1 cut(s) 107
Bbv12I GWGCWC 2 cut(s) 33, 314
BbvI GCAGC 2 cut(s) 304, 1033
BccI CCATC 4 cut(s) 799, 870, 902, 1447
BceAI ACGGC 2 cut(s) 287, 1028
BcgI CGANNNNNNTGC 2 cut(s) 421, 455
BciT130I CCWGG 4 cut(s) 88, 144, 744, 1383
BciVI GTATCC 1 cut(s) 1211
BclI TGATCA 1 cut(s) 1476
BcnI CCSGG 2 cut(s) 1277, 1487
BcoDI GTCTC 2 cut(s) 842, 890
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 6 cut(s) 125, 674, 686, 852, 882, 1437
BfmI CTRYAG 1 cut(s) 318
BfrI CTTAAG 1 cut(s) 92
BfuI GTATCC 1 cut(s) 1211
BglII AGATCT 2 cut(s) 390, 826
BisI GCNGC 2 cut(s) 318, 1022
BlsI GCNGC 2 cut(s) 319, 1023
Bme1390I CCNGG 6 cut(s) 88, 144, 744, 1277, 1383, 1487
Bme18I GGWCC 3 cut(s) 1331, 1367, 1483
BmeT110I CYCGRG 1 cut(s) 179
BmgT120I GGNCC 3 cut(s) 1331, 1367, 1483
BmiI GGNNCC 4 cut(s) 109, 666, 1319, 1485
BmrFI CCNGG 6 cut(s) 88, 144, 744, 1277, 1383, 1487
BmrI ACTGGG 1 cut(s) 1111
BmsI GCATC 3 cut(s) 463, 782, 1030
BmuI ACTGGG 1 cut(s) 1111
Bpu14I TTCGAA 1 cut(s) 341
BpuEI CTTGAG 2 cut(s) 152, 449
BpuMI CCSGG 2 cut(s) 1277, 1487
BsaBI GATNNNNATC 1 cut(s) 831
BsaJI CCNNGG 2 cut(s) 993, 1321
BsaWI WCCGGW 1 cut(s) 152
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 1175, 1361, 1505
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 3 cut(s) 360, 1106, 1253
Bse3DI GCAATG 1 cut(s) 936
Bse8I GATNNNNATC 1 cut(s) 831
BseBI CCWGG 4 cut(s) 88, 144, 744, 1383
BseDI CCNNGG 2 cut(s) 993, 1321
BseGI GGATG 4 cut(s) 539, 773, 1111, 1541
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 4 cut(s) 167, 1175, 1361, 1505
BseMI GCAATG 1 cut(s) 936
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 3 cut(s) 360, 1106, 1253
BseRI GAGGAG 5 cut(s) 535, 704, 815, 832, 1377
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 2 cut(s) 304, 1033
Bsh1236I CGCG 2 cut(s) 99, 291
BshFI GGCC 4 cut(s) 160, 302, 373, 1193
BshNI GGYRCC 1 cut(s) 107
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 2 cut(s) 33, 314
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 3 cut(s) 153, 1277, 1487
BsiWI CGTACG 1 cut(s) 1209
BslFI GGGAC 2 cut(s) 194, 439
BslI CCNNNNNNNGG 4 cut(s) 167, 1175, 1361, 1505
BsmAI GTCTC 2 cut(s) 842, 890
BsmFI GGGAC 2 cut(s) 194, 439
BsnI GGCC 4 cut(s) 160, 302, 373, 1193
BsoBI CYCGRG 1 cut(s) 179
Bsp119I TTCGAA 1 cut(s) 341
Bsp1286I GDGCHC 2 cut(s) 33, 314
Bsp143I GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
BspANI GGCC 4 cut(s) 160, 302, 373, 1193
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 2 cut(s) 99, 291
BspHI TCATGA 1 cut(s) 1547
BspLI GGNNCC 4 cut(s) 109, 666, 1319, 1485
BspMAI CTGCAG 1 cut(s) 322
BspPI GGATC 4 cut(s) 588, 659, 672, 1286
BspQI GCTCTTC 1 cut(s) 483
BspT104I TTCGAA 1 cut(s) 341
BspT107I GGYRCC 1 cut(s) 107
BspTI CTTAAG 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 936
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 3 cut(s) 360, 1106, 1253
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 2 cut(s) 993, 1321
BssMI GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
BssT1I CCWWGG 2 cut(s) 993, 1321
Bst2UI CCWGG 4 cut(s) 88, 144, 744, 1383
Bst4CI ACNGT 1 cut(s) 104
Bst6I CTCTTC 3 cut(s) 483, 553, 653
BstAFI CTTAAG 1 cut(s) 92
BstBI TTCGAA 1 cut(s) 341
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 508
BstENI CCTNNNNNAGG 2 cut(s) 1359, 1503
BstF5I GGATG 4 cut(s) 539, 773, 1111, 1541
BstFNI CGCG 2 cut(s) 99, 291
BstHHI GCGC 2 cut(s) 99, 444
BstKTI GATC 7 cut(s) 165, 393, 583, 667, 829, 1294, 1479
BstMAI GTCTC 2 cut(s) 842, 890
BstMBI GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
BstMWI GCNNNNNNNGC 3 cut(s) 105, 770, 1148
BstNI CCWGG 4 cut(s) 88, 144, 744, 1383
BstNSI RCATGY 2 cut(s) 642, 1146
BstPI GGTNACC 1 cut(s) 508
BstSCI CCNGG 6 cut(s) 86, 142, 742, 1275, 1381, 1485
BstSFI CTRYAG 1 cut(s) 318
BstSLI GKGCMC 1 cut(s) 314
BstUI CGCG 2 cut(s) 99, 291
BstV1I GCAGC 2 cut(s) 304, 1033
BstX2I RGATCY 4 cut(s) 390, 664, 826, 1291
BstYI RGATCY 4 cut(s) 390, 664, 826, 1291
BsuI GTATCC 1 cut(s) 1211
BsuRI GGCC 4 cut(s) 160, 302, 373, 1193
BtgZI GCGATG 1 cut(s) 921
BtsCI GGATG 4 cut(s) 539, 773, 1111, 1541
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 4 cut(s) 109, 312, 402, 1246
Cac8I GCNNGC 1 cut(s) 375
CciI TCATGA 1 cut(s) 1547
CfoI GCGC 2 cut(s) 99, 444
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 3 cut(s) 1331, 1367, 1483
Csp6I GTAC 4 cut(s) 487, 622, 987, 1210
CspAI ACCGGT 1 cut(s) 152
CviQI GTAC 4 cut(s) 487, 622, 987, 1210
DdeI CTNAG 1 cut(s) 405
DpnI GATC 7 cut(s) 164, 392, 582, 666, 828, 1293, 1478
DpnII GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
DraI TTTAAA 1 cut(s) 1444
EaeI YGGCCR 2 cut(s) 158, 300
Eam1104I CTCTTC 3 cut(s) 483, 553, 653
EarI CTCTTC 3 cut(s) 483, 553, 653
Eco130I CCWWGG 2 cut(s) 993, 1321
Eco47I GGWCC 3 cut(s) 1331, 1367, 1483
Eco88I CYCGRG 1 cut(s) 179
Eco91I GGTNACC 1 cut(s) 508
EcoNI CCTNNNNNAGG 2 cut(s) 1359, 1503
EcoO109I RGGNCCY 1 cut(s) 1367
EcoO65I GGTNACC 1 cut(s) 508
EcoRII CCWGG 4 cut(s) 86, 142, 742, 1381
EcoT14I CCWWGG 2 cut(s) 993, 1321
EcoT22I ATGCAT 1 cut(s) 1425
ErhI CCWWGG 2 cut(s) 993, 1321
FalI AAGNNNNNCTT 2 cut(s) 611, 643
FaqI GGGAC 2 cut(s) 194, 439
FauNDI CATATG 1 cut(s) 1348
FbaI TGATCA 1 cut(s) 1476
FblI GTMKAC 2 cut(s) 603, 643
Fnu4HI GCNGC 2 cut(s) 318, 1022
FokI GGATG 4 cut(s) 526, 760, 1118, 1528
Fsp4HI GCNGC 2 cut(s) 318, 1022
FspBI CTAG 6 cut(s) 125, 674, 686, 852, 882, 1437
FspI TGCGCA 1 cut(s) 443
GlaI GCGC 2 cut(s) 98, 443
GluI GCNGC 2 cut(s) 318, 1022
HaeIII GGCC 4 cut(s) 160, 302, 373, 1193
HapII CCGG 3 cut(s) 153, 1277, 1487
HhaI GCGC 2 cut(s) 99, 444
Hin6I GCGC 2 cut(s) 97, 442
HinP1I GCGC 2 cut(s) 97, 442
HinfI GANTC 8 cut(s) 293, 428, 433, 645, 692, 929, 1073, 1225
HpaII CCGG 3 cut(s) 153, 1277, 1487
HphI GGTGA 1 cut(s) 502
Hpy166II GTNNAC 5 cut(s) 119, 312, 604, 624, 644
Hpy188I TCNGA 3 cut(s) 585, 934, 1178
Hpy188III TCNNGA 8 cut(s) 274, 524, 787, 869, 1295, 1405, 1463, 1548
Hpy8I GTNNAC 5 cut(s) 119, 312, 604, 624, 644
Hpy99I CGWCG 1 cut(s) 559
HpyAV CCTTC 5 cut(s) 637, 784, 919, 1079, 1208
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4V TGCA 7 cut(s) 264, 312, 320, 377, 1070, 1114, 1423
HpyF10VI GCNNNNNNNGC 3 cut(s) 105, 770, 1148
HpyF3I CTNAG 1 cut(s) 405
HspAI GCGC 2 cut(s) 97, 442
Ksp22I TGATCA 1 cut(s) 1476
Kzo9I GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
LguI GCTCTTC 1 cut(s) 483
LmnI GCTCC 3 cut(s) 4, 1134, 1342
Lsp1109I GCAGC 2 cut(s) 304, 1033
LweI GCATC 3 cut(s) 463, 782, 1030
MaeI CTAG 6 cut(s) 125, 674, 686, 852, 882, 1437
MaeIII GTNAC 4 cut(s) 508, 857, 1242, 1432
MalI GATC 7 cut(s) 164, 392, 582, 666, 828, 1293, 1478
MboI GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
MboII GAAGA 7 cut(s) 400, 470, 540, 640, 702, 827, 1129
MflI RGATCY 4 cut(s) 390, 664, 826, 1291
MhlI GDGCHC 2 cut(s) 33, 314
MluCI AATT 5 cut(s) 329, 696, 752, 795, 1170
MlyI GAGTC 3 cut(s) 437, 639, 701
Mph1103I ATGCAT 1 cut(s) 1425
MseI TTAA 8 cut(s) 17, 75, 81, 93, 653, 810, 1050, 1443
MslI CAYNNNNRTG 4 cut(s) 259, 995, 1035, 1546
MspCI CTTAAG 1 cut(s) 92
MspI CCGG 3 cut(s) 153, 1277, 1487
MspR9I CCNGG 6 cut(s) 88, 144, 744, 1277, 1383, 1487
MvaI CCWGG 4 cut(s) 88, 144, 744, 1383
MvnI CGCG 2 cut(s) 99, 291
MwoI GCNNNNNNNGC 3 cut(s) 105, 770, 1148
NciI CCSGG 2 cut(s) 1277, 1487
NdeI CATATG 1 cut(s) 1348
NdeII GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
NlaIV GGNNCC 4 cut(s) 109, 666, 1319, 1485
NmuCI GTSAC 2 cut(s) 508, 1432
NsbI TGCGCA 1 cut(s) 443
NsiI ATGCAT 1 cut(s) 1425
NspI RCATGY 2 cut(s) 642, 1146
NspV TTCGAA 1 cut(s) 341
OliI CACNNNNGTG 1 cut(s) 995
PaeR7I CTCGAG 1 cut(s) 179
PagI TCATGA 1 cut(s) 1547
PciSI GCTCTTC 1 cut(s) 483
PcsI WCGNNNNNNNCGW 1 cut(s) 972
PfeI GAWTC 5 cut(s) 293, 433, 929, 1073, 1225
Pfl23II CGTACG 1 cut(s) 1209
PflFI GACNNNGTC 1 cut(s) 506
PfoI TCCNGGA 1 cut(s) 1381
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 2 cut(s) 319, 1023
PleI GAGTC 3 cut(s) 436, 639, 700
PpsI GAGTC 3 cut(s) 436, 639, 700
PpuMI RGGWCCY 1 cut(s) 1367
Psp5II RGGWCCY 1 cut(s) 1367
Psp6I CCWGG 4 cut(s) 86, 142, 742, 1381
PspEI GGTNACC 1 cut(s) 508
PspGI CCWGG 4 cut(s) 86, 142, 742, 1381
PspLI CGTACG 1 cut(s) 1209
PspN4I GGNNCC 4 cut(s) 109, 666, 1319, 1485
PspPI GGNCC 3 cut(s) 1331, 1367, 1483
PspPPI RGGWCCY 1 cut(s) 1367
PspXI VCTCGAGB 1 cut(s) 179
PstI CTGCAG 1 cut(s) 322
PsuI RGATCY 4 cut(s) 390, 664, 826, 1291
PsyI GACNNNGTC 1 cut(s) 506
RsaI GTAC 4 cut(s) 488, 623, 988, 1211
RsaNI GTAC 4 cut(s) 487, 622, 987, 1210
RseI CAYNNNNRTG 4 cut(s) 259, 995, 1035, 1546
SapI GCTCTTC 1 cut(s) 483
SaqAI TTAA 8 cut(s) 17, 75, 81, 93, 653, 810, 1050, 1443
SatI GCNGC 2 cut(s) 318, 1022
Sau3AI GATC 7 cut(s) 162, 390, 580, 664, 826, 1291, 1476
Sau96I GGNCC 3 cut(s) 1331, 1367, 1483
SchI GAGTC 3 cut(s) 437, 639, 701
ScrFI CCNGG 6 cut(s) 88, 144, 744, 1277, 1383, 1487
SduI GDGCHC 2 cut(s) 33, 314
SfaNI GCATC 3 cut(s) 463, 782, 1030
SfcI CTRYAG 1 cut(s) 318
Sfr274I CTCGAG 1 cut(s) 179
SfuI TTCGAA 1 cut(s) 341
SinI GGWCC 3 cut(s) 1331, 1367, 1483
SlaI CTCGAG 1 cut(s) 179
SmiI ATTTAAAT 1 cut(s) 1444
SmiMI CAYNNNNRTG 4 cut(s) 259, 995, 1035, 1546
SmlI CTYRAG 4 cut(s) 92, 131, 179, 464
SmoI CTYRAG 4 cut(s) 92, 131, 179, 464
SpeI ACTAGT 1 cut(s) 851
Sse9I AATT 5 cut(s) 329, 696, 752, 795, 1170
SspI AATATT 2 cut(s) 79, 1127
SspMI CTAG 6 cut(s) 125, 674, 686, 852, 882, 1437
StyD4I CCNGG 6 cut(s) 86, 142, 742, 1275, 1381, 1485
StyI CCWWGG 2 cut(s) 993, 1321
SwaI ATTTAAAT 1 cut(s) 1444
TaaI ACNGT 1 cut(s) 104
TaqI TCGA 7 cut(s) 180, 341, 431, 769, 1001, 1305, 1372
TasI AATT 5 cut(s) 329, 696, 752, 795, 1170
TatI WGTACW 1 cut(s) 621
TfiI GAWTC 5 cut(s) 293, 433, 929, 1073, 1225
Tru1I TTAA 8 cut(s) 17, 75, 81, 93, 653, 810, 1050, 1443
Tru9I TTAA 8 cut(s) 17, 75, 81, 93, 653, 810, 1050, 1443
TscAI CASTG 4 cut(s) 109, 319, 409, 1253
TseFI GTSAC 2 cut(s) 508, 1432
TseI GCWGC 2 cut(s) 317, 1021
Tsp45I GTSAC 2 cut(s) 508, 1432
TspDTI ATGAA 9 cut(s) 211, 709, 827, 938, 1119, 1136, 1253, 1335, 1408
TspRI CASTG 4 cut(s) 109, 319, 409, 1253
Tth111I GACNNNGTC 1 cut(s) 506
Vha464I CTTAAG 1 cut(s) 92
VneI GTGCAC 1 cut(s) 310
VpaK11BI GGWCC 3 cut(s) 1331, 1367, 1483
XagI CCTNNNNNAGG 2 cut(s) 1359, 1503
XapI RAATTY 2 cut(s) 329, 752
XceI RCATGY 2 cut(s) 642, 1146
XcmI CCANNNNNNNNNTGG 1 cut(s) 520
XhoI CTCGAG 1 cut(s) 179
XmiI GTMKAC 2 cut(s) 603, 643
XspI CTAG 6 cut(s) 125, 674, 686, 852, 882, 1437
Zsp2I ATGCAT 1 cut(s) 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.