Rroxscaffold_1G00054590

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000192
Physical Location & Seq
Forward (+)
75955891 .. 75958126
2236 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054590.1

Sequence Viewer

Length: 1584 bp
ATGGAGCTGGACTACTTAATCCTTGCTGTGCTCGCCTTTGTTTCTCTTTACTATCTTTTTTGTTTGTCGAATGTTAATATTAATCCCAGGCTTAAGCGTGACAGTGGCACCAAAAGTGAACTACTAGGGCTTGAGCTACCACCAGGAAGCACCGGTTGGCCGATCATCGGCGAAACCCTCGAGTATCTACGCACAGCAAAACAGGGTGTCCCTGAAAAGTTCATAGCAGACAGGAGAAACAAGCACTCGTCATCATTGTCATGCAAGGTTTTCAAGACCTCTTTGCTACGCGAATCTATGGCCGTGCTGTGCACTGCTGCAGGGAACAAATTTCTGTTTTCAAACGAGAACAAACTGGTCAAGTCTTGGTGGCCTGCAAACTTTGAGAAGATCTTTGCCAACACTGAGAAAACAGACACCACCCAAGAGTCGATTCGGTTGCGCAAAGTCTTGTCTCCATTTCTCAAGCCTGATGCTCTTCACAAGTACATAGGGGTCATGGACGAGGTCACCAAACAACATCTGGACATGTATTGGTCATCCTCCTCGTCCTCGTCGGTTGATTATGTAAAAGAAAAGGATCAGAAAGTGATTATCAAAGTCTACCCATTAGCCAAGAATTACACCTTCACTTTAGCATGTAGACTCTTCTTAAACATTGAGGATCCAAAGCTAGTTGCCAAACTAGAGGAGTCAATTCGGCATATATCTTCGGGCTTCATTTCGCTGCCAATAGATTTGCCAGGCACGAAATTCAACCGAGCCATTCGAGCATCCAAGCAAATCAAGAAGGAAATTGAGGAGATGGTTAAGCAGAGGAGGACAGATCTACATCTTCATCTTTTGGAGACTAGTAATAGTAACCATCATCAAGATTTGTTGTCTAGGTTGCTCATGGAGACATATAGCGATGGGAAAGAGCTGATGAAGGAATCAGACATTGCCAACAAGTTGTATGGTCTAATAGTCGGTGCTTACGACAATATAAGTACCACCTTGGTGTCGATTATCATGTTTCTGTCCCAGCTTCCTCATGTTTATGATGCCGTCCTTAAAGTAATTGATGAATTAAGAATTGGCTGGACAGAGCAAATGGAGATTGCAGAATCAAAGGCAGAAGGGGAGTTGCTGAACTGGGATGACTTGCAGAAGATGAAATATTCATGGAGCGTGGCAAGTGAAGCGTTGAGATTGTTGCCACCAATTCTCGGAACTTTTAGAGAGGCCATTACCGACTTTGCGTACGAAGGATACATGATTCCAAAAGGAATGAAGTTACACTGGAATATGTATGCCACACATAAAAACCCGGAATACTTCCCAGATCCAGAGAAGTTCGACCCGTCAAGGTTCCAAGGACAAGGACCAGCTCCTTATTCATATGTTCCTTTTGGAGGAGGACCTCGAATGTGTCCAGGAAAAGAATATGCTCGGTTCAAGATATTGGTTTTCATGCATAATGTTGTCACTAGATTTAAATGGGAGATGGTTTTTCCAGACGAGAAAATGATCATGGACCCGGTTCTTATTCCTACAAAAGGACTTCCTATTCGCCTTTTTCCTCATCAATCAGCATCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

527

Amino Acids

60.4

Weight (kDa)

8.62

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 514 5.5e-56 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 443
AccB1I GGYRCC 1 cut(s) 107
AccI GTMKAC 2 cut(s) 603, 643
AccII CGCG 1 cut(s) 291
AclWI GGATC 4 cut(s) 588, 659, 672, 1319
AcoI YGGCCR 2 cut(s) 158, 300
AcsI RAATTY 2 cut(s) 329, 752
AfaI GTAC 3 cut(s) 488, 991, 1244
AfiI CCNNNNNNNGG 4 cut(s) 167, 1208, 1394, 1538
AflII CTTAAG 1 cut(s) 92
AflIII ACRYGT 1 cut(s) 528
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 4 cut(s) 274, 342, 757, 1438
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 4 cut(s) 86, 142, 742, 1414
AjuI GAANNNNNNNTTGG 6 cut(s) 139, 171, 417, 449, 1059, 1091
AleI CACNNNNGTG 1 cut(s) 998
AluBI AGCT 6 cut(s) 7, 136, 673, 922, 1027, 1370
AluI AGCT 6 cut(s) 7, 136, 673, 922, 1027, 1370
Alw21I GWGCWC 2 cut(s) 33, 314
Alw26I GTCTC 3 cut(s) 459, 842, 893
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 4 cut(s) 588, 659, 672, 1319
Ama87I CYCGRG 1 cut(s) 179
AoxI GGCC 4 cut(s) 158, 300, 371, 1224
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 2 cut(s) 317, 727
ApoI RAATTY 2 cut(s) 329, 752
ArsI GACNNNNNNTTYG 2 cut(s) 1533, 1565
AseI ATTAAT 1 cut(s) 81
AsiGI ACCGGT 1 cut(s) 152
AspLEI GCGC 1 cut(s) 444
AspS9I GGNCC 3 cut(s) 1364, 1400, 1516
AsuC2I CCSGG 2 cut(s) 1310, 1520
AsuHPI GGTGA 1 cut(s) 502
AvaI CYCGRG 1 cut(s) 179
AvaII GGWCC 3 cut(s) 1364, 1400, 1516
BaeGI GKGCMC 1 cut(s) 314
BamHI GGATCC 1 cut(s) 664
BanI GGYRCC 1 cut(s) 107
Bbv12I GWGCWC 2 cut(s) 33, 314
BbvI GCAGC 2 cut(s) 304, 714
BccI CCATC 4 cut(s) 799, 873, 905, 1480
BceAI ACGGC 2 cut(s) 287, 1031
BcgI CGANNNNNNTGC 2 cut(s) 421, 455
BciT130I CCWGG 4 cut(s) 88, 144, 744, 1416
BciVI GTATCC 1 cut(s) 1244
BclI TGATCA 1 cut(s) 1509
BcnI CCSGG 2 cut(s) 1310, 1520
BcoDI GTCTC 3 cut(s) 459, 842, 893
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 6 cut(s) 125, 674, 686, 852, 885, 1470
BfmI CTRYAG 1 cut(s) 318
BfrI CTTAAG 1 cut(s) 92
BfuI GTATCC 1 cut(s) 1244
BglII AGATCT 2 cut(s) 390, 826
BisI GCNGC 2 cut(s) 318, 728
BlsI GCNGC 2 cut(s) 319, 729
Bme1390I CCNGG 6 cut(s) 88, 144, 744, 1310, 1416, 1520
Bme18I GGWCC 3 cut(s) 1364, 1400, 1516
BmeT110I CYCGRG 1 cut(s) 179
BmgT120I GGNCC 3 cut(s) 1364, 1400, 1516
BmiI GGNNCC 4 cut(s) 109, 666, 1352, 1518
BmrFI CCNGG 6 cut(s) 88, 144, 744, 1310, 1416, 1520
BmrI ACTGGG 1 cut(s) 1144
BmsI GCATC 3 cut(s) 463, 782, 1033
BmuI ACTGGG 1 cut(s) 1144
BpuEI CTTGAG 2 cut(s) 152, 449
BpuMI CCSGG 2 cut(s) 1310, 1520
BsaBI GATNNNNATC 1 cut(s) 831
BsaJI CCNNGG 3 cut(s) 86, 996, 1354
BsaWI WCCGGW 1 cut(s) 152
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 1208, 1394, 1538
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 3 cut(s) 360, 1139, 1286
Bse3DI GCAATG 1 cut(s) 939
Bse8I GATNNNNATC 1 cut(s) 831
BseBI CCWGG 4 cut(s) 88, 144, 744, 1416
BseDI CCNNGG 3 cut(s) 86, 996, 1354
BseGI GGATG 4 cut(s) 539, 773, 1144, 1574
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 4 cut(s) 167, 1208, 1394, 1538
BseMI GCAATG 1 cut(s) 939
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 3 cut(s) 360, 1139, 1286
BseRI GAGGAG 5 cut(s) 535, 704, 815, 832, 1410
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 2 cut(s) 304, 714
BseYI CCCAGC 1 cut(s) 1023
Bsh1236I CGCG 1 cut(s) 291
BshFI GGCC 4 cut(s) 160, 302, 373, 1226
BshNI GGYRCC 1 cut(s) 107
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 2 cut(s) 33, 314
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 3 cut(s) 153, 1310, 1520
BsiWI CGTACG 1 cut(s) 1242
BslFI GGGAC 2 cut(s) 194, 1006
BslI CCNNNNNNNGG 4 cut(s) 167, 1208, 1394, 1538
BsmAI GTCTC 3 cut(s) 459, 842, 893
BsmFI GGGAC 2 cut(s) 194, 1006
BsnI GGCC 4 cut(s) 160, 302, 373, 1226
BsoBI CYCGRG 1 cut(s) 179
Bsp1286I GDGCHC 2 cut(s) 33, 314
Bsp143I GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
BspANI GGCC 4 cut(s) 160, 302, 373, 1226
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 1 cut(s) 291
BspHI TCATGA 1 cut(s) 1580
BspLI GGNNCC 4 cut(s) 109, 666, 1352, 1518
BspMAI CTGCAG 1 cut(s) 322
BspPI GGATC 4 cut(s) 588, 659, 672, 1319
BspQI GCTCTTC 1 cut(s) 483
BspT107I GGYRCC 1 cut(s) 107
BspTI CTTAAG 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 939
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 3 cut(s) 360, 1139, 1286
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 3 cut(s) 86, 996, 1354
BssMI GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
BssT1I CCWWGG 2 cut(s) 996, 1354
Bst2UI CCWGG 4 cut(s) 88, 144, 744, 1416
Bst4CI ACNGT 1 cut(s) 104
Bst6I CTCTTC 2 cut(s) 483, 653
BstAFI CTTAAG 1 cut(s) 92
BstC8I GCNNGC 2 cut(s) 33, 375
BstDEI CTNAG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 508
BstENI CCTNNNNNAGG 2 cut(s) 1392, 1536
BstF5I GGATG 4 cut(s) 539, 773, 1144, 1574
BstFNI CGCG 1 cut(s) 291
BstHHI GCGC 1 cut(s) 444
BstKTI GATC 7 cut(s) 165, 393, 583, 667, 829, 1327, 1512
BstMAI GTCTC 3 cut(s) 459, 842, 893
BstMBI GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
BstMWI GCNNNNNNNGC 3 cut(s) 32, 770, 1181
BstNI CCWGG 4 cut(s) 88, 144, 744, 1416
BstNSI RCATGY 2 cut(s) 532, 642
BstPI GGTNACC 1 cut(s) 508
BstSCI CCNGG 6 cut(s) 86, 142, 742, 1308, 1414, 1518
BstSFI CTRYAG 1 cut(s) 318
BstSLI GKGCMC 1 cut(s) 314
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 2 cut(s) 304, 714
BstX2I RGATCY 4 cut(s) 390, 664, 826, 1324
BstYI RGATCY 4 cut(s) 390, 664, 826, 1324
BsuI GTATCC 1 cut(s) 1244
BsuRI GGCC 4 cut(s) 160, 302, 373, 1226
BtgZI GCGATG 1 cut(s) 924
BtsCI GGATG 4 cut(s) 539, 773, 1144, 1574
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 4 cut(s) 109, 312, 402, 1279
Cac8I GCNNGC 2 cut(s) 33, 375
CciI TCATGA 1 cut(s) 1580
CfoI GCGC 1 cut(s) 444
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 3 cut(s) 1364, 1400, 1516
Csp6I GTAC 3 cut(s) 487, 990, 1243
CspAI ACCGGT 1 cut(s) 152
CviQI GTAC 3 cut(s) 487, 990, 1243
DdeI CTNAG 1 cut(s) 405
DpnI GATC 7 cut(s) 164, 392, 582, 666, 828, 1326, 1511
DpnII GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
DraI TTTAAA 1 cut(s) 1477
EaeI YGGCCR 2 cut(s) 158, 300
Eam1104I CTCTTC 2 cut(s) 483, 653
EarI CTCTTC 2 cut(s) 483, 653
Eco130I CCWWGG 2 cut(s) 996, 1354
Eco47I GGWCC 3 cut(s) 1364, 1400, 1516
Eco88I CYCGRG 1 cut(s) 179
Eco91I GGTNACC 1 cut(s) 508
EcoNI CCTNNNNNAGG 2 cut(s) 1392, 1536
EcoO109I RGGNCCY 1 cut(s) 1400
EcoO65I GGTNACC 1 cut(s) 508
EcoRII CCWGG 4 cut(s) 86, 142, 742, 1414
EcoT14I CCWWGG 2 cut(s) 996, 1354
EcoT22I ATGCAT 1 cut(s) 1458
ErhI CCWWGG 2 cut(s) 996, 1354
FaqI GGGAC 2 cut(s) 194, 1006
FauNDI CATATG 1 cut(s) 1381
FbaI TGATCA 1 cut(s) 1509
FblI GTMKAC 2 cut(s) 603, 643
Fnu4HI GCNGC 2 cut(s) 318, 728
FokI GGATG 4 cut(s) 526, 760, 1151, 1561
Fsp4HI GCNGC 2 cut(s) 318, 728
FspBI CTAG 6 cut(s) 125, 674, 686, 852, 885, 1470
FspI TGCGCA 1 cut(s) 443
GlaI GCGC 1 cut(s) 443
GluI GCNGC 2 cut(s) 318, 728
GsaI CCCAGC 1 cut(s) 1027
HaeIII GGCC 4 cut(s) 160, 302, 373, 1226
HapII CCGG 3 cut(s) 153, 1310, 1520
HhaI GCGC 1 cut(s) 444
Hin6I GCGC 1 cut(s) 442
HinP1I GCGC 1 cut(s) 442
HinfI GANTC 8 cut(s) 293, 428, 433, 645, 692, 932, 1106, 1258
HpaII CCGG 3 cut(s) 153, 1310, 1520
HphI GGTGA 1 cut(s) 502
Hpy166II GTNNAC 4 cut(s) 119, 312, 604, 644
Hpy188I TCNGA 3 cut(s) 585, 937, 1211
Hpy188III TCNNGA 8 cut(s) 274, 524, 787, 872, 1328, 1438, 1496, 1581
Hpy8I GTNNAC 4 cut(s) 119, 312, 604, 644
Hpy99I CGWCG 1 cut(s) 559
HpyAV CCTTC 5 cut(s) 637, 784, 922, 1112, 1241
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4V TGCA 7 cut(s) 264, 312, 320, 377, 1103, 1147, 1456
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 770, 1181
HpyF3I CTNAG 1 cut(s) 405
HspAI GCGC 1 cut(s) 442
Ksp22I TGATCA 1 cut(s) 1509
Kzo9I GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
LguI GCTCTTC 1 cut(s) 483
LmnI GCTCC 3 cut(s) 4, 1167, 1375
Lsp1109I GCAGC 2 cut(s) 304, 714
LweI GCATC 3 cut(s) 463, 782, 1033
MaeI CTAG 6 cut(s) 125, 674, 686, 852, 885, 1470
MaeIII GTNAC 5 cut(s) 98, 508, 860, 1275, 1465
MalI GATC 7 cut(s) 164, 392, 582, 666, 828, 1326, 1511
MboI GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
MboII GAAGA 6 cut(s) 400, 470, 640, 702, 827, 1162
MflI RGATCY 4 cut(s) 390, 664, 826, 1324
MhlI GDGCHC 2 cut(s) 33, 314
MluCI AATT 9 cut(s) 329, 619, 696, 752, 795, 1059, 1067, 1074, 1203
MlyI GAGTC 3 cut(s) 437, 639, 701
Mph1103I ATGCAT 1 cut(s) 1458
MseI TTAA 9 cut(s) 17, 75, 81, 93, 653, 810, 1053, 1070, 1476
MslI CAYNNNNRTG 4 cut(s) 259, 998, 1038, 1579
MspCI CTTAAG 1 cut(s) 92
MspI CCGG 3 cut(s) 153, 1310, 1520
MspR9I CCNGG 6 cut(s) 88, 144, 744, 1310, 1416, 1520
MvaI CCWGG 4 cut(s) 88, 144, 744, 1416
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 3 cut(s) 32, 770, 1181
NciI CCSGG 2 cut(s) 1310, 1520
NdeI CATATG 1 cut(s) 1381
NdeII GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
NlaIV GGNNCC 4 cut(s) 109, 666, 1352, 1518
NmuCI GTSAC 3 cut(s) 98, 508, 1465
NsbI TGCGCA 1 cut(s) 443
NsiI ATGCAT 1 cut(s) 1458
NspI RCATGY 2 cut(s) 532, 642
OliI CACNNNNGTG 1 cut(s) 998
PaeR7I CTCGAG 1 cut(s) 179
PagI TCATGA 1 cut(s) 1580
PciI ACATGT 1 cut(s) 528
PciSI GCTCTTC 1 cut(s) 483
PcsI WCGNNNNNNNCGW 1 cut(s) 975
PfeI GAWTC 5 cut(s) 293, 433, 932, 1106, 1258
Pfl23II CGTACG 1 cut(s) 1242
PflFI GACNNNGTC 1 cut(s) 506
PfoI TCCNGGA 1 cut(s) 1414
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 2 cut(s) 319, 729
PleI GAGTC 3 cut(s) 436, 639, 700
PpsI GAGTC 3 cut(s) 436, 639, 700
PpuMI RGGWCCY 1 cut(s) 1400
PscI ACATGT 1 cut(s) 528
PshBI ATTAAT 1 cut(s) 81
Psp5II RGGWCCY 1 cut(s) 1400
Psp6I CCWGG 4 cut(s) 86, 142, 742, 1414
PspEI GGTNACC 1 cut(s) 508
PspFI CCCAGC 1 cut(s) 1023
PspGI CCWGG 4 cut(s) 86, 142, 742, 1414
PspLI CGTACG 1 cut(s) 1242
PspN4I GGNNCC 4 cut(s) 109, 666, 1352, 1518
PspPI GGNCC 3 cut(s) 1364, 1400, 1516
PspPPI RGGWCCY 1 cut(s) 1400
PspXI VCTCGAGB 1 cut(s) 179
PstI CTGCAG 1 cut(s) 322
PsuI RGATCY 4 cut(s) 390, 664, 826, 1324
PsyI GACNNNGTC 1 cut(s) 506
RsaI GTAC 3 cut(s) 488, 991, 1244
RsaNI GTAC 3 cut(s) 487, 990, 1243
RseI CAYNNNNRTG 4 cut(s) 259, 998, 1038, 1579
SapI GCTCTTC 1 cut(s) 483
SaqAI TTAA 9 cut(s) 17, 75, 81, 93, 653, 810, 1053, 1070, 1476
SatI GCNGC 2 cut(s) 318, 728
Sau3AI GATC 7 cut(s) 162, 390, 580, 664, 826, 1324, 1509
Sau96I GGNCC 3 cut(s) 1364, 1400, 1516
SchI GAGTC 3 cut(s) 437, 639, 701
ScrFI CCNGG 6 cut(s) 88, 144, 744, 1310, 1416, 1520
SduI GDGCHC 2 cut(s) 33, 314
SfaNI GCATC 3 cut(s) 463, 782, 1033
SfcI CTRYAG 1 cut(s) 318
Sfr274I CTCGAG 1 cut(s) 179
SinI GGWCC 3 cut(s) 1364, 1400, 1516
SlaI CTCGAG 1 cut(s) 179
SmiI ATTTAAAT 1 cut(s) 1477
SmiMI CAYNNNNRTG 4 cut(s) 259, 998, 1038, 1579
SmlI CTYRAG 4 cut(s) 92, 131, 179, 464
SmoI CTYRAG 4 cut(s) 92, 131, 179, 464
SpeI ACTAGT 1 cut(s) 851
Sse9I AATT 9 cut(s) 329, 619, 696, 752, 795, 1059, 1067, 1074, 1203
SspI AATATT 2 cut(s) 79, 1160
SspMI CTAG 6 cut(s) 125, 674, 686, 852, 885, 1470
StyD4I CCNGG 6 cut(s) 86, 142, 742, 1308, 1414, 1518
StyI CCWWGG 2 cut(s) 996, 1354
SwaI ATTTAAAT 1 cut(s) 1477
TaaI ACNGT 1 cut(s) 104
TaqI TCGA 7 cut(s) 68, 180, 431, 769, 1004, 1338, 1405
TasI AATT 9 cut(s) 329, 619, 696, 752, 795, 1059, 1067, 1074, 1203
TatI WGTACW 1 cut(s) 486
TfiI GAWTC 5 cut(s) 293, 433, 932, 1106, 1258
Tru1I TTAA 9 cut(s) 17, 75, 81, 93, 653, 810, 1053, 1070, 1476
Tru9I TTAA 9 cut(s) 17, 75, 81, 93, 653, 810, 1053, 1070, 1476
TscAI CASTG 4 cut(s) 109, 319, 409, 1286
TseFI GTSAC 3 cut(s) 98, 508, 1465
TseI GCWGC 2 cut(s) 317, 727
Tsp45I GTSAC 3 cut(s) 98, 508, 1465
TspRI CASTG 4 cut(s) 109, 319, 409, 1286
Tth111I GACNNNGTC 1 cut(s) 506
Vha464I CTTAAG 1 cut(s) 92
VneI GTGCAC 1 cut(s) 310
VpaK11BI GGWCC 3 cut(s) 1364, 1400, 1516
VspI ATTAAT 1 cut(s) 81
XagI CCTNNNNNAGG 2 cut(s) 1392, 1536
XapI RAATTY 2 cut(s) 329, 752
XceI RCATGY 2 cut(s) 532, 642
XcmI CCANNNNNNNNNTGG 1 cut(s) 520
XhoI CTCGAG 1 cut(s) 179
XmiI GTMKAC 2 cut(s) 603, 643
XspI CTAG 6 cut(s) 125, 674, 686, 852, 885, 1470
Zsp2I ATGCAT 1 cut(s) 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.