Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000192

Physical Location & Seq

Genomic Coordinates Reverse (-)

47995913 .. 47998981

Gene Structure 3069 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58081

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGTGATGGAGCAATATTATTTCCAACCCATCACCCTCCTCTTGGGCTTTGTTTCCTTTCTGGCAATCTCTCTCTTGGTGCTTTTCTACAGGCACAGATCCCAGTTCACCAGCAACAACCTCCCGCCGGGTAACGTCGGCTACCCGGTGATAGGAGAGACCTACGAGTTCGTCTCTTCGGGTCAGAAAGGCCACCCCGAGAAGTTCATCTTAGACCGGGTGAACAAGCACTCCTCCCAAGTCTTCAAGACCTCCTTGATTGGGGAGAGAACTGCCTTCTTCTGTGGCACCGCTTGCAACAAGTTCTTGTTCTCCAATGAAAACAAGCTTGTCAAAGTCTGGTTTCCTAGCTGTGTCGATAAGATCTTCCCTTCTTCCACCGGATCCGCCGCAGAGGAGGCCACAAAGATGAGAAGGATGCTACCCAACTTCGTGAAGCTCGACGCTCTGCAACGATACTTCGGAATCATTGACCAGTGTACCCAGTCCCACTTTGCAGATAGCTGGGAAAACCAAAAGGAAGTTCATGCCTTCGAACTCACCAAGAACTACACCTTCAAGCTTGCTGCACGCTTGTTTGTTAGCCTTGAAGATCAAGCGGACATAGAAAAACTCAGCAAACCGTTCCATGTAGTGAATGCCGGAATCACATCGATGCCCATCGACTTCCCCGGAACCCCATTTAATAAAGCCATCAAGGCCGCCAACTTGATTAGGAAGGATTTGTACAAGATCATCAAGCAGAGGAAGGTCGACTTAGCAGACGGCAATGCATCCCCCACACAAGACATGTTATCACACATGCTCTTGACCTCTGATGAAGATGGAACATATCTGAAGGAATCTGATATCGCCGATAAGATTCTTGGTATGTTGGTTGCCGGCTTCGACACACTAAGTGCTGAATTGACTTTCATTGTGAAGTATCTTGGCGAGCTTCCTCATATCTACAATGCAGTCTACAAGGAGCAAATGGAGATTGTAAATTCAAAAGCCCCAGGGGAGCCGTTGAAGTGGGAAGACCTTCAGAAGATGAAATACTCGTGGAATGTAGCTCAAGAAGTGCTGAGGATGGCACCACCTGTTCAAGGAGCCTTCAGGGAAGCTTTAACCGATTTCGTCTTCAATGGTTTCACCATTCCAAAAGGGTGGAAGTTGTACTGGAGCGCAAACTCGACACACAAGAGCGCTGATTGTTTCCCCGAACCAGAGAAATTCGACCCGTCAAGATTTGAAGGAAAGGGACCGGCACCTTACACGTTTCTTCCATTCGGCGGAGGCCCGAGAATGTGTCCCGGGAATGAGTACACTCGGGTGGTGACATTGGTGTTCATGCACAACTTGGTGACAAGGTTCAAGTGGGAGAAGGTTTTCCCTGATGAGAAGACCACTGTTGCCCCTTTCCCTACCCCCGCCAAGGGACTTCCCATCCGCCTTTTTCATCATCAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009987 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016134 GO:0016135 GO:0016137 GO:0016138 GO:0016491 GO:0016705 GO:0016709 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044237 GO:0044238 GO:0044255 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

484

Amino Acids

55.0

Weight (kDa)

8.63

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	42 - 456	1.7e-52	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca	FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica	MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica	Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis	pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis	RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata	RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora	Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa	Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha	Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana	Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	287, 1075, 1249
AccI	GTMKAC	2 cut(s)	753, 960
AciI	CCGC	9 cut(s)	125, 291, 387, 390, 599, 702, 1275, 1413, 1432
AclWI	GGATC	3 cut(s)	93, 378, 391
AcsI	RAATTY	2 cut(s)	985, 1214
AcuI	CTGAAG	3 cut(s)	857, 1010, 1081
AdeI	CACNNNGTG	1 cut(s)	899
AfaI	GTAC	4 cut(s)	481, 728, 1160, 1307
AfeI	AGCGCT	1 cut(s)	1189
AfiI	CCNNNNNNNGG	8 cut(s)	43, 127, 152, 261, 1088, 1274, 1417, 1418
AflIII	ACRYGT	2 cut(s)	789, 1257
AgsI	TTSAA	9 cut(s)	247, 559, 590, 990, 1012, 1088, 1126, 1235, 1357
AjnI	CCWGG	1 cut(s)	997
AjuI	GAANNNNNNNTTGG	2 cut(s)	507, 539
AleI	CACNNNNGTG	1 cut(s)	1313
AloI	GAACNNNNNNTCC	2 cut(s)	215, 247
AluBI	AGCT	8 cut(s)	328, 351, 439, 504, 562, 937, 1055, 1106
AluI	AGCT	8 cut(s)	328, 351, 439, 504, 562, 937, 1055, 1106
Alw26I	GTCTC	2 cut(s)	152, 178
AlwI	GGATC	3 cut(s)	93, 378, 391
Ama87I	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
Aor51HI	AGCGCT	1 cut(s)	1189
AoxI	GGCC	4 cut(s)	190, 399, 699, 1279
ApeKI	GCWGC	1 cut(s)	566
ApoI	RAATTY	2 cut(s)	985, 1214
Asp700I	GAANNNNTTC	2 cut(s)	1023, 1370
AspLEI	GCGC	2 cut(s)	1169, 1190
AspS9I	GGNCC	2 cut(s)	1244, 1280
AsuC2I	CCSGG	6 cut(s)	129, 146, 218, 672, 1296, 1297
AsuHPI	GGTGA	9 cut(s)	16, 25, 100, 160, 232, 532, 1126, 1330, 1357
AsuII	TTCGAA	1 cut(s)	534
AvaI	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
AvaII	GGWCC	1 cut(s)	1244
BaeI	ACNNNNGTAYC	2 cut(s)	463, 496
BamHI	GGATCC	1 cut(s)	383
BanI	GGYRCC	3 cut(s)	287, 1075, 1249
BarI	GAAGNNNNNNTAC	4 cut(s)	710, 742, 1022, 1054
BauI	CACGAG	1 cut(s)	1042
BbsI	GAAGAC	4 cut(s)	235, 1026, 1114, 1391
BbvCI	CCTCAGC	1 cut(s)	1067
BbvI	GCAGC	1 cut(s)	553
BccI	CCATC	6 cut(s)	38, 668, 701, 818, 1066, 1436
BceAI	ACGGC	2 cut(s)	781, 991
BciT130I	CCWGG	1 cut(s)	999
BcnI	CCSGG	6 cut(s)	129, 146, 218, 672, 1296, 1297
BcoDI	GTCTC	2 cut(s)	152, 178
BfaI	CTAG	1 cut(s)	348
BfmI	CTRYAG	1 cut(s)	88
BfoI	RGCGCY	1 cut(s)	1191
BglI	GCCNNNNNGGC	1 cut(s)	698
BglII	AGATCT	1 cut(s)	363
BisI	GCNGC	3 cut(s)	390, 567, 702
BlsI	GCNGC	3 cut(s)	391, 568, 703
Bme1390I	CCNGG	7 cut(s)	129, 146, 218, 672, 999, 1296, 1297
Bme18I	GGWCC	1 cut(s)	1244
BmeT110I	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
BmgT120I	GGNCC	2 cut(s)	1244, 1280
BmiI	GGNNCC	8 cut(s)	289, 385, 676, 1005, 1077, 1093, 1245, 1251
BmrFI	CCNGG	7 cut(s)	129, 146, 218, 672, 999, 1296, 1297
BmrI	ACTGGG	2 cut(s)	97, 478
BmsI	GCATC	3 cut(s)	408, 645, 782
BmuI	ACTGGG	2 cut(s)	97, 478
BpiI	GAAGAC	4 cut(s)	235, 1026, 1114, 1391
BplI	GAGNNNNNCTC	2 cut(s)	158, 190
BpmI	CTGGAG	1 cut(s)	1183
Bpu10I	CCTNAGC	1 cut(s)	1067
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	1 cut(s)	1041
BpuMI	CCSGG	6 cut(s)	129, 146, 218, 672, 1296, 1297
Bsa29I	ATCGAT	1 cut(s)	653
BsaBI	GATNNNNATC	1 cut(s)	659
BsaI	GGTCTC	1 cut(s)	152
BsaJI	CCNNGG	5 cut(s)	670, 997, 998, 1295, 1416
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	2 cut(s)	215, 245
Bsc4I	CCNNNNNNNGG	8 cut(s)	43, 127, 152, 261, 1088, 1274, 1417, 1418
Bse118I	RCCGGY	2 cut(s)	881, 1246
Bse1I	ACTGG	4 cut(s)	103, 475, 484, 1166
Bse3DI	GCAATG	1 cut(s)	775
Bse8I	GATNNNNATC	1 cut(s)	659
BseBI	CCWGG	1 cut(s)	999
BseCI	ATCGAT	1 cut(s)	653
BseDI	CCNNGG	5 cut(s)	670, 997, 998, 1295, 1416
BseGI	GGATG	4 cut(s)	423, 773, 1077, 1428
BseJI	GATNNNNATC	1 cut(s)	659
BseLI	CCNNNNNNNGG	8 cut(s)	43, 127, 152, 261, 1088, 1274, 1417, 1418
BseMI	GCAATG	1 cut(s)	775
BseMII	CTCAG	2 cut(s)	628, 1058
BseNI	ACTGG	4 cut(s)	103, 475, 484, 1166
BseRI	GAGGAG	3 cut(s)	29, 223, 410
BseXI	GCAGC	1 cut(s)	553
BseYI	CCCAGC	1 cut(s)	504
BsgI	GTGCAG	1 cut(s)	552
BshFI	GGCC	4 cut(s)	192, 401, 701, 1281
BshNI	GGYRCC	3 cut(s)	287, 1075, 1249
BshVI	ATCGAT	1 cut(s)	653
BsiHKCI	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
BsiSI	CCGG	9 cut(s)	128, 146, 217, 381, 642, 672, 882, 1247, 1296
BslFI	GGGAC	4 cut(s)	472, 1257, 1278, 1434
BslI	CCNNNNNNNGG	8 cut(s)	43, 127, 152, 261, 1088, 1274, 1417, 1418
BsmAI	GTCTC	2 cut(s)	152, 178
BsmBI	CGTCTC	1 cut(s)	178
BsmFI	GGGAC	4 cut(s)	472, 1257, 1278, 1434
BsmI	GAATGC	1 cut(s)	643
BsnI	GGCC	4 cut(s)	192, 401, 701, 1281
Bso31I	GGTCTC	1 cut(s)	152
BsoBI	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1407I	TGTACA	1 cut(s)	726
Bsp143I	GATC	5 cut(s)	98, 363, 383, 592, 732
BspACI	CCGC	9 cut(s)	125, 291, 387, 390, 599, 702, 1275, 1413, 1432
BspANI	GGCC	4 cut(s)	192, 401, 701, 1281
BspCNI	CTCAG	2 cut(s)	627, 1059
BspDI	ATCGAT	1 cut(s)	653
BspLI	GGNNCC	8 cut(s)	289, 385, 676, 1005, 1077, 1093, 1245, 1251
BspPI	GGATC	3 cut(s)	93, 378, 391
BspT104I	TTCGAA	1 cut(s)	534
BspT107I	GGYRCC	3 cut(s)	287, 1075, 1249
BspTNI	GGTCTC	1 cut(s)	152
BsrDI	GCAATG	1 cut(s)	775
BsrFI	RCCGGY	2 cut(s)	881, 1246
BsrGI	TGTACA	1 cut(s)	726
BsrI	ACTGG	4 cut(s)	103, 475, 484, 1166
BssAI	RCCGGY	2 cut(s)	881, 1246
BssECI	CCNNGG	5 cut(s)	670, 997, 998, 1295, 1416
BssMI	GATC	5 cut(s)	98, 363, 383, 592, 732
BssSI	CACGAG	1 cut(s)	1042
BssT1I	CCWWGG	1 cut(s)	1416
Bst2BI	CACGAG	1 cut(s)	1042
Bst2UI	CCWGG	1 cut(s)	999
Bst4CI	ACNGT	2 cut(s)	624, 1393
Bst6I	CTCTTC	1 cut(s)	181
BstAPI	GCANNNNNTGC	1 cut(s)	294
BstAUI	TGTACA	1 cut(s)	726
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	5 cut(s)	295, 564, 571, 883, 935
BstDEI	CTNAG	5 cut(s)	211, 614, 757, 896, 1067
BstENI	CCTNNNNNAGG	1 cut(s)	1086
BstF5I	GGATG	4 cut(s)	423, 773, 1077, 1428
BstH2I	RGCGCY	1 cut(s)	1191
BstHHI	GCGC	2 cut(s)	1169, 1190
BstKTI	GATC	5 cut(s)	101, 366, 386, 595, 735
BstMAI	GTCTC	2 cut(s)	152, 178
BstMBI	GATC	5 cut(s)	98, 363, 383, 592, 732
BstMWI	GCNNNNNNNGC	3 cut(s)	294, 398, 698
BstNI	CCWGG	1 cut(s)	999
BstNSI	RCATGY	2 cut(s)	793, 805
BstSCI	CCNGG	7 cut(s)	127, 144, 216, 670, 997, 1294, 1295
BstSFI	CTRYAG	1 cut(s)	88
BstV1I	GCAGC	1 cut(s)	553
BstV2I	GAAGAC	4 cut(s)	235, 1026, 1114, 1391
BstX2I	RGATCY	3 cut(s)	98, 363, 383
BstXI	CCANNNNNNTGG	1 cut(s)	1149
BstYI	RGATCY	3 cut(s)	98, 363, 383
Bsu15I	ATCGAT	1 cut(s)	653
BsuRI	GGCC	4 cut(s)	192, 401, 701, 1281
BsuTUI	ATCGAT	1 cut(s)	653
BtsCI	GGATG	4 cut(s)	423, 773, 1077, 1428
BtsIMutI	CAGTG	2 cut(s)	482, 1389
Cac8I	GCNNGC	5 cut(s)	295, 564, 571, 883, 935
CfoI	GCGC	2 cut(s)	1169, 1190
Cfr10I	RCCGGY	2 cut(s)	881, 1246
Cfr13I	GGNCC	2 cut(s)	1244, 1280
Cfr9I	CCCGGG	1 cut(s)	1295
ClaI	ATCGAT	1 cut(s)	653
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	4 cut(s)	480, 727, 1159, 1306
CviAII	CATG	5 cut(s)	527, 629, 790, 802, 1333
CviQI	GTAC	4 cut(s)	480, 727, 1159, 1306
DdeI	CTNAG	5 cut(s)	211, 614, 757, 896, 1067
DpnI	GATC	5 cut(s)	100, 365, 385, 594, 734
DpnII	GATC	5 cut(s)	98, 363, 383, 592, 732
DraIII	CACNNNGTG	1 cut(s)	899
Eam1104I	CTCTTC	1 cut(s)	181
EarI	CTCTTC	1 cut(s)	181
EciI	GGCGGA	3 cut(s)	376, 1290, 1421
Eco130I	CCWWGG	1 cut(s)	1416
Eco31I	GGTCTC	1 cut(s)	152
Eco32I	GATATC	1 cut(s)	850
Eco47I	GGWCC	1 cut(s)	1244
Eco47III	AGCGCT	1 cut(s)	1189
Eco57I	CTGAAG	3 cut(s)	857, 1010, 1081
Eco88I	CYCGRG	4 cut(s)	197, 1282, 1295, 1311
EcoNI	CCTNNNNNAGG	1 cut(s)	1086
EcoRII	CCWGG	1 cut(s)	997
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	1 cut(s)	1416
EcoT22I	ATGCAT	1 cut(s)	775
ErhI	CCWWGG	1 cut(s)	1416
Esp3I	CGTCTC	1 cut(s)	178
FaeI	CATG	5 cut(s)	530, 632, 793, 805, 1336
FaiI	YATR	9 cut(s)	528, 605, 630, 791, 803, 832, 872, 945, 1334
FalI	AAGNNNNNCTT	6 cut(s)	194, 226, 239, 271, 740, 772
FaqI	GGGAC	4 cut(s)	472, 1257, 1278, 1434
FatI	CATG	5 cut(s)	526, 628, 789, 801, 1332
FauI	CCCGC	2 cut(s)	132, 1420
FblI	GTMKAC	2 cut(s)	753, 960
Fnu4HI	GCNGC	3 cut(s)	390, 567, 702
FokI	GGATG	4 cut(s)	430, 760, 1084, 1415
Fsp4HI	GCNGC	3 cut(s)	390, 567, 702
FspBI	CTAG	1 cut(s)	348
GlaI	GCGC	2 cut(s)	1168, 1189
GluI	GCNGC	3 cut(s)	390, 567, 702
GsaI	CCCAGC	1 cut(s)	508
GsuI	CTGGAG	1 cut(s)	1183
HaeII	RGCGCY	1 cut(s)	1191
HaeIII	GGCC	4 cut(s)	192, 401, 701, 1281
HapII	CCGG	9 cut(s)	128, 146, 217, 381, 642, 672, 882, 1247, 1296
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	1169, 1190
Hin1II	CATG	5 cut(s)	530, 632, 793, 805, 1336
Hin6I	GCGC	2 cut(s)	1167, 1188
HinP1I	GCGC	2 cut(s)	1167, 1188
HincII	GTYRAC	1 cut(s)	754
HindII	GTYRAC	1 cut(s)	754
HindIII	AAGCTT	3 cut(s)	326, 560, 1104
HinfI	GANTC	4 cut(s)	465, 645, 842, 862
HpaII	CCGG	9 cut(s)	128, 146, 217, 381, 642, 672, 882, 1247, 1296
HphI	GGTGA	9 cut(s)	16, 25, 100, 160, 232, 532, 1126, 1330, 1357
Hpy166II	GTNNAC	6 cut(s)	108, 223, 480, 754, 961, 1308
Hpy188I	TCNGA	6 cut(s)	186, 464, 817, 837, 847, 1029
Hpy188III	TCNNGA	5 cut(s)	247, 433, 808, 1058, 1227
Hpy8I	GTNNAC	6 cut(s)	108, 223, 480, 754, 961, 1308
Hpy99I	CGWCG	2 cut(s)	140, 446
HpyCH4III	ACNGT	2 cut(s)	624, 1393
HpyCH4IV	ACGT	2 cut(s)	135, 1259
HpyCH4V	TGCA	7 cut(s)	297, 451, 497, 569, 773, 956, 1336
HpyF10VI	GCNNNNNNNGC	3 cut(s)	294, 398, 698
HpyF3I	CTNAG	5 cut(s)	211, 614, 757, 896, 1067
HpySE526I	ACGT	2 cut(s)	135, 1259
Hsp92II	CATG	5 cut(s)	530, 632, 793, 805, 1336
HspAI	GCGC	2 cut(s)	1167, 1188
KroI	GCCGGC	1 cut(s)	881
KroNI	GCCGGC	1 cut(s)	883
Kzo9I	GATC	5 cut(s)	98, 363, 383, 592, 732
LmnI	GCTCC	5 cut(s)	10, 967, 1003, 1091, 1164
Lsp1109I	GCAGC	1 cut(s)	553
LweI	GCATC	3 cut(s)	408, 645, 782
MaeI	CTAG	1 cut(s)	348
MaeII	ACGT	2 cut(s)	135, 1259
MaeIII	GTNAC	3 cut(s)	131, 1318, 1345
MalI	GATC	5 cut(s)	100, 365, 385, 594, 734
MboI	GATC	5 cut(s)	98, 363, 383, 592, 732
MflI	RGATCY	3 cut(s)	98, 363, 383
MluCI	AATT	3 cut(s)	905, 985, 1214
MmeI	TCCRAC	1 cut(s)	49
Mph1103I	ATGCAT	1 cut(s)	775
MroNI	GCCGGC	1 cut(s)	881
MroXI	GAANNNNTTC	2 cut(s)	1023, 1370
MseI	TTAA	2 cut(s)	684, 1109
MslI	CAYNNNNRTG	3 cut(s)	407, 653, 1313
MspI	CCGG	9 cut(s)	128, 146, 217, 381, 642, 672, 882, 1247, 1296
MspR9I	CCNGG	7 cut(s)	129, 146, 218, 672, 999, 1296, 1297
Mva1269I	GAATGC	1 cut(s)	643
MvaI	CCWGG	1 cut(s)	999
MwoI	GCNNNNNNNGC	3 cut(s)	294, 398, 698
NaeI	GCCGGC	1 cut(s)	883
NciI	CCSGG	6 cut(s)	129, 146, 218, 672, 1296, 1297
NdeII	GATC	5 cut(s)	98, 363, 383, 592, 732
NgoMIV	GCCGGC	1 cut(s)	881
NlaIII	CATG	5 cut(s)	530, 632, 793, 805, 1336
NlaIV	GGNNCC	8 cut(s)	289, 385, 676, 1005, 1077, 1093, 1245, 1251
NmuCI	GTSAC	2 cut(s)	1318, 1345
NsiI	ATGCAT	1 cut(s)	775
NspI	RCATGY	2 cut(s)	793, 805
NspV	TTCGAA	1 cut(s)	534
OliI	CACNNNNGTG	1 cut(s)	1313
PasI	CCCWGGG	1 cut(s)	998
PciI	ACATGT	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PctI	GAATGC	1 cut(s)	643
PdiI	GCCGGC	1 cut(s)	883
PdmI	GAANNNNTTC	2 cut(s)	1023, 1370
PfeI	GAWTC	4 cut(s)	465, 645, 842, 862
PkrI	GCNGC	3 cut(s)	391, 568, 703
PscI	ACATGT	1 cut(s)	789
Psp6I	CCWGG	1 cut(s)	997
PspFI	CCCAGC	1 cut(s)	504
PspGI	CCWGG	1 cut(s)	997
PspN4I	GGNNCC	8 cut(s)	289, 385, 676, 1005, 1077, 1093, 1245, 1251
PspPI	GGNCC	2 cut(s)	1244, 1280
PsuI	RGATCY	3 cut(s)	98, 363, 383
RsaI	GTAC	4 cut(s)	481, 728, 1160, 1307
RsaNI	GTAC	4 cut(s)	480, 727, 1159, 1306
RseI	CAYNNNNRTG	3 cut(s)	407, 653, 1313
SalI	GTCGAC	1 cut(s)	752
SaqAI	TTAA	2 cut(s)	684, 1109
SatI	GCNGC	3 cut(s)	390, 567, 702
Sau3AI	GATC	5 cut(s)	98, 363, 383, 592, 732
Sau96I	GGNCC	2 cut(s)	1244, 1280
ScrFI	CCNGG	7 cut(s)	129, 146, 218, 672, 999, 1296, 1297
SfaNI	GCATC	3 cut(s)	408, 645, 782
SfcI	CTRYAG	1 cut(s)	88
SfuI	TTCGAA	1 cut(s)	534
SinI	GGWCC	1 cut(s)	1244
SmaI	CCCGGG	1 cut(s)	1297
SmiMI	CAYNNNNRTG	3 cut(s)	407, 653, 1313
SmlI	CTYRAG	1 cut(s)	1056
SmoI	CTYRAG	1 cut(s)	1056
Sse9I	AATT	3 cut(s)	905, 985, 1214
SsiI	CCGC	9 cut(s)	125, 291, 387, 390, 599, 702, 1275, 1413, 1432
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	1 cut(s)	348
StyD4I	CCNGG	7 cut(s)	127, 144, 216, 670, 997, 1294, 1295
StyI	CCWWGG	1 cut(s)	1416
TaaI	ACNGT	2 cut(s)	624, 1393
TaiI	ACGT	2 cut(s)	138, 1262
TaqI	TCGA	9 cut(s)	357, 441, 534, 653, 663, 753, 888, 1175, 1218
TasI	AATT	3 cut(s)	905, 985, 1214
TatI	WGTACW	3 cut(s)	726, 1158, 1305
TauI	GCSGC	2 cut(s)	392, 704
TfiI	GAWTC	4 cut(s)	465, 645, 842, 862
Tru1I	TTAA	2 cut(s)	684, 1109
Tru9I	TTAA	2 cut(s)	684, 1109
TscAI	CASTG	2 cut(s)	482, 1396
TseFI	GTSAC	2 cut(s)	1318, 1345
TseI	GCWGC	1 cut(s)	566
Tsp45I	GTSAC	2 cut(s)	1318, 1345
TspDTI	ATGAA	8 cut(s)	196, 333, 515, 834, 904, 1049, 1321, 1430
TspMI	CCCGGG	1 cut(s)	1295
TspRI	CASTG	2 cut(s)	482, 1396
VpaK11BI	GGWCC	1 cut(s)	1244
XagI	CCTNNNNNAGG	1 cut(s)	1086
XapI	RAATTY	2 cut(s)	985, 1214
XceI	RCATGY	2 cut(s)	793, 805
XmaI	CCCGGG	1 cut(s)	1295
XmiI	GTMKAC	2 cut(s)	753, 960
XmnI	GAANNNNTTC	2 cut(s)	1023, 1370
XspI	CTAG	1 cut(s)	348
Zsp2I	ATGCAT	1 cut(s)	775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.