RchiOBHm_Chr1g0325391

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000192
Physical Location & Seq
Reverse (-)
13319460 .. 13322084
2625 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55512

Sequence Viewer

Length: 1482 bp
ATGGAAACTACTACGTTCTTCATTTCCCTACTAGTTCTCTTTTTTGCTTCTCTCTACTATATCTTCTATAAAATTATTCCAAGCCCTAGGCAACAAGTAACAGTTTATCAACTGCCACCAGGAAGCACAGGTTGGCCCATCATTGGTGAAACCTTCGAGTATCTACGCACAGCCAGAAACGGTGTCCCTGAAAAGTTTGTAGCAGACCGAAGGAAAAAGTACTCCAATGTCTCATTATCATCGGCTGCAGCAACAGCAGGCTCGTGCAAGGTGTTCAAGACATCGTTGCTTGGCGAATCTATGGCCATGTTGTGCACCGCTGCTGGAAACAAATTCCTGTTTTCAAACGAGAACAAACTGGTCAAGTCCTGGTGGCCTGCTAACTTCAAAAAGATGTTTCCAAACACCGACAAAGCAGACTTCTCCAAAGAGACCATCCGAATGCGCGCAGTCATGTCTACATTTCTCAAGCCTGACGCTGTCCGAAAGCATATAGGCGTCATGGATCAGGTCACCAAACACCATTTCGATAAGCATTGGTCCTCGCTGGATCAAAAACAAGTGATCATGTTTCACTCACTAGCAAAGAAGTATACCTTAGCATTATCTTGCAGACTCTTCTTAAACATCGAGGATCCACAAGTGATTGCCAAGCTAGAGAAACCCATTCGGCATATAAATGCGGGGCTCGTTTCATTGCCAGTAGATCTGCCGGGCACCAACTTCAACAGAGCCATCAGAGCATCCAAGAAAATGAGGGAGGAAATTGAGAGTATGGTTGTGCAGAGGAAGATAGATCTCATGAATCTGACTTTGATTGATCGTGAACAATTAGCGAATGCACCAGAAGATCTAATGTCTAGCTGGCTCATGGAGACATATAGCGATGGAGAAGAGATGACGGAAGCGGACATTGCCGAAAAGTTGTGGGGTATAATACTTGCCGGTTATGACTCTATAATTAACACACTGTGTTCCACTGTCATCTTTCTGTCACAGCTTCCTCCAGTTTATGATGCCGTCCTTAAAGAGCAAATGGAGATTGCAGAATCGAAAGATGAAGGAGAGTTGCTCAACTGGGGGGACATACAAAAGATGAAATATACATGGAACGTGGTATGTGAAGTATTGCGATTGCAGCCCCCAGCTAGTGGAACTTTTAGGGAGGCCATCACCGACTTCTTACATTGGAATGCTTTTGCCACACATAAGAACCCGGAATACTTTCCAGATCCACACAAGTTTGAGCCGTCAAGGTTTGAAGGACAAGGACCACCTCCTTTCTCGTATGTTCCTTTTGGAGGAGGACCTCGAATGTGTCCCGGAAAAGAAAATGCTCGATTCCAGATATTGGTTTTCATGTATAACCTGGTCACCAGATTCAAGTGGGAGATGGTTTTTCCTGACGAGAAGATGGTCGTGGACCCTGTTCCTTTTCCTACCCAAGGACTTCCTATTCATCTGTTTTCTCATAAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

493

Amino Acids

56.36

Weight (kDa)

8.33

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 466 2.6e-39 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 716
AccB7I CCANNNNNTGG 2 cut(s) 1151, 1351
AccI GTMKAC 2 cut(s) 458, 593
AccII CGCG 1 cut(s) 447
AciI CCGC 3 cut(s) 318, 683, 908
AclWI GGATC 5 cut(s) 513, 558, 629, 642, 1226
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 1 cut(s) 332
AcyI GRCGYC 1 cut(s) 498
AdeI CACNNNGTG 1 cut(s) 972
AfaI GTAC 1 cut(s) 221
AfiI CCNNNNNNNGG 5 cut(s) 143, 1151, 1301, 1351, 1445
AgsI TTSAA 6 cut(s) 277, 345, 388, 727, 1262, 1384
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 3 cut(s) 118, 368, 1368
AjuI GAANNNNNNNTTGG 4 cut(s) 115, 147, 509, 541
AluBI AGCT 4 cut(s) 655, 864, 1000, 1148
AluI AGCT 4 cut(s) 655, 864, 1000, 1148
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 3 cut(s) 235, 425, 869
Alw44I GTGCAC 1 cut(s) 313
AlwI GGATC 5 cut(s) 513, 558, 629, 642, 1226
AoxI GGCC 4 cut(s) 134, 303, 374, 1167
ApaLI GTGCAC 1 cut(s) 313
ApeKI GCWGC 4 cut(s) 245, 248, 320, 1138
ApoI RAATTY 1 cut(s) 332
Asp700I GAANNNNTTC 1 cut(s) 1224
AspA2I CCTAGG 1 cut(s) 86
AspLEI GCGC 2 cut(s) 447, 449
AspS9I GGNCC 5 cut(s) 135, 540, 1271, 1307, 1423
AsuC2I CCSGG 3 cut(s) 714, 1217, 1323
AsuHPI GGTGA 4 cut(s) 158, 505, 1165, 1366
AvaII GGWCC 4 cut(s) 540, 1271, 1307, 1423
AvrII CCTAGG 1 cut(s) 86
BaeGI GKGCMC 2 cut(s) 317, 719
BalI TGGCCA 1 cut(s) 305
BamHI GGATCC 1 cut(s) 634
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 690
BauI CACGAG 1 cut(s) 262
Bbv12I GWGCWC 1 cut(s) 317
BbvI GCAGC 4 cut(s) 232, 260, 307, 1150
BccI CCATC 7 cut(s) 146, 443, 743, 881, 1178, 1387, 1408
BceAI ACGGC 2 cut(s) 1004, 1234
BciT130I CCWGG 3 cut(s) 120, 370, 1370
BclI TGATCA 1 cut(s) 564
BcnI CCSGG 3 cut(s) 714, 1217, 1323
BcoDI GTCTC 3 cut(s) 235, 425, 869
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 6 cut(s) 32, 87, 581, 656, 861, 1149
BfmI CTRYAG 1 cut(s) 246
BglII AGATCT 3 cut(s) 706, 796, 850
BisI GCNGC 4 cut(s) 246, 249, 321, 1139
BlnI CCTAGG 1 cut(s) 86
BlsI GCNGC 4 cut(s) 247, 250, 322, 1140
BmcAI AGTACT 1 cut(s) 221
Bme1390I CCNGG 6 cut(s) 120, 370, 714, 1217, 1323, 1370
Bme18I GGWCC 4 cut(s) 540, 1271, 1307, 1423
BmgT120I GGNCC 5 cut(s) 135, 540, 1271, 1307, 1423
BmiI GGNNCC 3 cut(s) 636, 718, 1425
BmrFI CCNGG 6 cut(s) 120, 370, 714, 1217, 1323, 1370
BmrI ACTGGG 1 cut(s) 1087
BmsI GCATC 2 cut(s) 752, 1006
BmuI ACTGGG 1 cut(s) 1087
BplI GAGNNNNNCTC 2 cut(s) 1056, 1088
BpmI CTGGAG 1 cut(s) 990
Bpu10I CCTNAGC 1 cut(s) 598
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 3 cut(s) 714, 1217, 1323
BsaHI GRCGYC 1 cut(s) 498
BsaI GGTCTC 1 cut(s) 425
BsaJI CCNNGG 2 cut(s) 86, 1444
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 1151, 1301, 1351, 1445
Bse118I RCCGGY 1 cut(s) 944
Bse1I ACTGG 4 cut(s) 363, 701, 1007, 1082
Bse3DI GCAATG 2 cut(s) 695, 912
BseBI CCWGG 3 cut(s) 120, 370, 1370
BseDI CCNNGG 2 cut(s) 86, 1444
BseGI GGATG 2 cut(s) 435, 743
BseLI CCNNNNNNNGG 5 cut(s) 143, 1151, 1301, 1351, 1445
BseMI GCAATG 2 cut(s) 695, 912
BseNI ACTGG 4 cut(s) 363, 701, 1007, 1082
BsePI GCGCGC 1 cut(s) 445
BseRI GAGGAG 1 cut(s) 1317
BseSI GKGCMC 2 cut(s) 317, 719
BseXI GCAGC 4 cut(s) 232, 260, 307, 1150
BseYI CCCAGC 1 cut(s) 1144
BsgI GTGCAG 1 cut(s) 803
Bsh1236I CGCG 1 cut(s) 447
BshFI GGCC 4 cut(s) 136, 305, 376, 1169
BshNI GGYRCC 1 cut(s) 716
BsiHKAI GWGCWC 1 cut(s) 317
BsiSI CCGG 4 cut(s) 713, 945, 1217, 1323
BslFI GGGAC 3 cut(s) 170, 1097, 1305
BslI CCNNNNNNNGG 5 cut(s) 143, 1151, 1301, 1351, 1445
BsmAI GTCTC 3 cut(s) 235, 425, 869
BsmFI GGGAC 3 cut(s) 170, 1097, 1305
BsmI GAATGC 3 cut(s) 447, 844, 1198
BsnI GGCC 4 cut(s) 136, 305, 376, 1169
Bso31I GGTCTC 1 cut(s) 425
Bsp1286I GDGCHC 3 cut(s) 317, 690, 719
Bsp143I GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
BspACI CCGC 3 cut(s) 318, 683, 908
BspANI GGCC 4 cut(s) 136, 305, 376, 1169
BspFNI CGCG 1 cut(s) 447
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 3 cut(s) 636, 718, 1425
BspMAI CTGCAG 1 cut(s) 250
BspPI GGATC 5 cut(s) 513, 558, 629, 642, 1226
BspT107I GGYRCC 1 cut(s) 716
BspTNI GGTCTC 1 cut(s) 425
BsrDI GCAATG 2 cut(s) 695, 912
BsrFI RCCGGY 1 cut(s) 944
BsrI ACTGG 4 cut(s) 363, 701, 1007, 1082
BssAI RCCGGY 1 cut(s) 944
BssECI CCNNGG 2 cut(s) 86, 1444
BssHII GCGCGC 1 cut(s) 445
BssMI GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
BssNAI GTATAC 1 cut(s) 594
BssNI GRCGYC 1 cut(s) 498
BssSI CACGAG 1 cut(s) 262
BssT1I CCWWGG 2 cut(s) 86, 1444
Bst1107I GTATAC 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 262
Bst2UI CCWGG 3 cut(s) 120, 370, 1370
Bst4CI ACNGT 4 cut(s) 103, 182, 972, 982
Bst6I CTCTTC 2 cut(s) 623, 888
BstACI GRCGYC 1 cut(s) 498
BstC8I GCNNGC 4 cut(s) 259, 378, 447, 866
BstDEI CTNAG 1 cut(s) 598
BstEII GGTNACC 2 cut(s) 511, 1372
BstENI CCTNNNNNAGG 2 cut(s) 1299, 1443
BstF5I GGATG 2 cut(s) 435, 743
BstFNI CGCG 1 cut(s) 447
BstHHI GCGC 2 cut(s) 447, 449
BstKTI GATC 9 cut(s) 508, 553, 567, 637, 709, 799, 823, 853, 1234
BstMAI GTCTC 3 cut(s) 235, 425, 869
BstMBI GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
BstMWI GCNNNNNNNGC 4 cut(s) 254, 740, 914, 1138
BstNI CCWGG 3 cut(s) 120, 370, 1370
BstPI GGTNACC 2 cut(s) 511, 1372
BstSCI CCNGG 6 cut(s) 118, 368, 712, 1215, 1321, 1368
BstSFI CTRYAG 1 cut(s) 246
BstSLI GKGCMC 2 cut(s) 317, 719
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 4 cut(s) 232, 260, 307, 1150
BstX2I RGATCY 5 cut(s) 634, 706, 796, 850, 1231
BstYI RGATCY 5 cut(s) 634, 706, 796, 850, 1231
BstZ17I GTATAC 1 cut(s) 594
BsuRI GGCC 4 cut(s) 136, 305, 376, 1169
BtgZI GCGATG 1 cut(s) 900
BtsCI GGATG 2 cut(s) 435, 743
BtsIMutI CAGTG 2 cut(s) 968, 978
Cac8I GCNNGC 4 cut(s) 259, 378, 447, 866
CciI TCATGA 1 cut(s) 801
CfoI GCGC 2 cut(s) 447, 449
Cfr10I RCCGGY 1 cut(s) 944
Cfr13I GGNCC 5 cut(s) 135, 540, 1271, 1307, 1423
CseI GACGC 2 cut(s) 485, 487
CsiI ACCWGGT 1 cut(s) 1368
Csp6I GTAC 1 cut(s) 220
CviAII CATG 8 cut(s) 307, 454, 502, 568, 802, 871, 1107, 1360
CviQI GTAC 1 cut(s) 220
DdeI CTNAG 1 cut(s) 598
DpnI GATC 9 cut(s) 507, 552, 566, 636, 708, 798, 822, 852, 1233
DpnII GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
DraIII CACNNNGTG 1 cut(s) 972
EaeI YGGCCR 1 cut(s) 303
Eam1104I CTCTTC 2 cut(s) 623, 888
EarI CTCTTC 2 cut(s) 623, 888
Eco130I CCWWGG 2 cut(s) 86, 1444
Eco24I GRGCYC 1 cut(s) 690
Eco31I GGTCTC 1 cut(s) 425
Eco47I GGWCC 4 cut(s) 540, 1271, 1307, 1423
Eco91I GGTNACC 2 cut(s) 511, 1372
EcoNI CCTNNNNNAGG 2 cut(s) 1299, 1443
EcoO109I RGGNCCY 1 cut(s) 1307
EcoO65I GGTNACC 2 cut(s) 511, 1372
EcoRII CCWGG 3 cut(s) 118, 368, 1368
EcoT14I CCWWGG 2 cut(s) 86, 1444
EcoT38I GRGCYC 1 cut(s) 690
ErhI CCWWGG 2 cut(s) 86, 1444
FaeI CATG 8 cut(s) 310, 457, 505, 571, 805, 874, 1110, 1363
FalI AAGNNNNNCTT 2 cut(s) 581, 613
FaqI GGGAC 3 cut(s) 170, 1097, 1305
FatI CATG 8 cut(s) 306, 453, 501, 567, 801, 870, 1106, 1359
FauI CCCGC 1 cut(s) 676
FbaI TGATCA 1 cut(s) 564
FblI GTMKAC 2 cut(s) 458, 593
Fnu4HI GCNGC 4 cut(s) 246, 249, 321, 1139
FokI GGATG 2 cut(s) 422, 730
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 4 cut(s) 246, 249, 321, 1139
FspBI CTAG 6 cut(s) 32, 87, 581, 656, 861, 1149
GlaI GCGC 2 cut(s) 446, 448
GluI GCNGC 4 cut(s) 246, 249, 321, 1139
GsaI CCCAGC 1 cut(s) 1148
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 4 cut(s) 136, 305, 376, 1169
HapII CCGG 4 cut(s) 713, 945, 1217, 1323
HgaI GACGC 2 cut(s) 485, 487
HhaI GCGC 2 cut(s) 447, 449
Hin1I GRCGYC 1 cut(s) 498
Hin1II CATG 8 cut(s) 310, 457, 505, 571, 805, 874, 1110, 1363
Hin6I GCGC 2 cut(s) 445, 447
HinP1I GCGC 2 cut(s) 445, 447
HinfI GANTC 7 cut(s) 296, 615, 805, 953, 1049, 1341, 1380
HpaII CCGG 4 cut(s) 713, 945, 1217, 1323
HphI GGTGA 4 cut(s) 158, 505, 1165, 1366
Hpy166II GTNNAC 5 cut(s) 315, 459, 594, 827, 1423
Hpy188I TCNGA 4 cut(s) 440, 485, 740, 810
Hpy188III TCNNGA 6 cut(s) 277, 802, 824, 1229, 1345, 1403
Hpy8I GTNNAC 5 cut(s) 315, 459, 594, 827, 1423
HpyAV CCTTC 4 cut(s) 163, 204, 1055, 1256
HpyCH4III ACNGT 4 cut(s) 103, 182, 972, 982
HpyCH4IV ACGT 2 cut(s) 14, 1113
HpyCH4V TGCA 8 cut(s) 248, 267, 315, 612, 784, 842, 1046, 1138
HpyF10VI GCNNNNNNNGC 4 cut(s) 254, 740, 914, 1138
HpyF3I CTNAG 1 cut(s) 598
HpySE526I ACGT 2 cut(s) 14, 1113
Hsp92I GRCGYC 1 cut(s) 498
Hsp92II CATG 8 cut(s) 310, 457, 505, 571, 805, 874, 1110, 1363
HspAI GCGC 2 cut(s) 445, 447
Ksp22I TGATCA 1 cut(s) 564
Kzo9I GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
Lsp1109I GCAGC 4 cut(s) 232, 260, 307, 1150
LweI GCATC 2 cut(s) 752, 1006
MabI ACCWGGT 1 cut(s) 1368
MaeI CTAG 6 cut(s) 32, 87, 581, 656, 861, 1149
MaeII ACGT 2 cut(s) 14, 1113
MaeIII GTNAC 4 cut(s) 97, 511, 993, 1372
MalI GATC 9 cut(s) 507, 552, 566, 636, 708, 798, 822, 852, 1233
MboI GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
MboII GAAGA 7 cut(s) 10, 55, 610, 802, 860, 905, 1423
MflI RGATCY 5 cut(s) 634, 706, 796, 850, 1231
MhlI GDGCHC 3 cut(s) 317, 690, 719
MlsI TGGCCA 1 cut(s) 305
MluCI AATT 5 cut(s) 72, 332, 765, 830, 960
MluNI TGGCCA 1 cut(s) 305
MlyI GAGTC 2 cut(s) 609, 947
Mox20I TGGCCA 1 cut(s) 305
MroXI GAANNNNTTC 1 cut(s) 1224
MscI TGGCCA 1 cut(s) 305
MseI TTAA 3 cut(s) 623, 963, 1026
MslI CAYNNNNRTG 3 cut(s) 440, 678, 1191
Msp20I TGGCCA 1 cut(s) 305
MspA1I CMGCKG 1 cut(s) 320
MspI CCGG 4 cut(s) 713, 945, 1217, 1323
MspR9I CCNGG 6 cut(s) 120, 370, 714, 1217, 1323, 1370
Mva1269I GAATGC 3 cut(s) 447, 844, 1198
MvaI CCWGG 3 cut(s) 120, 370, 1370
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 4 cut(s) 254, 740, 914, 1138
NciI CCSGG 3 cut(s) 714, 1217, 1323
NdeII GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
NlaIII CATG 8 cut(s) 310, 457, 505, 571, 805, 874, 1110, 1363
NlaIV GGNNCC 3 cut(s) 636, 718, 1425
NmuCI GTSAC 3 cut(s) 511, 993, 1372
PagI TCATGA 1 cut(s) 801
PauI GCGCGC 1 cut(s) 445
PctI GAATGC 3 cut(s) 447, 844, 1198
PdmI GAANNNNTTC 1 cut(s) 1224
PfeI GAWTC 5 cut(s) 296, 805, 1049, 1341, 1380
PflFI GACNNNGTC 1 cut(s) 479
PflMI CCANNNNNTGG 2 cut(s) 1151, 1351
PfoI TCCNGGA 1 cut(s) 1321
PkrI GCNGC 4 cut(s) 247, 250, 322, 1140
PleI GAGTC 2 cut(s) 609, 947
PpsI GAGTC 2 cut(s) 609, 947
PpuMI RGGWCCY 1 cut(s) 1307
Psp5II RGGWCCY 1 cut(s) 1307
Psp6I CCWGG 3 cut(s) 118, 368, 1368
PspEI GGTNACC 2 cut(s) 511, 1372
PspFI CCCAGC 1 cut(s) 1144
PspGI CCWGG 3 cut(s) 118, 368, 1368
PspN4I GGNNCC 3 cut(s) 636, 718, 1425
PspPI GGNCC 5 cut(s) 135, 540, 1271, 1307, 1423
PspPPI RGGWCCY 1 cut(s) 1307
PsrI GAACNNNNNNTAC 2 cut(s) 1205, 1237
PstI CTGCAG 1 cut(s) 250
PsuI RGATCY 5 cut(s) 634, 706, 796, 850, 1231
PsyI GACNNNGTC 1 cut(s) 479
PteI GCGCGC 1 cut(s) 445
RsaI GTAC 1 cut(s) 221
RsaNI GTAC 1 cut(s) 220
RseI CAYNNNNRTG 3 cut(s) 440, 678, 1191
SaqAI TTAA 3 cut(s) 623, 963, 1026
SatI GCNGC 4 cut(s) 246, 249, 321, 1139
Sau3AI GATC 9 cut(s) 505, 550, 564, 634, 706, 796, 820, 850, 1231
Sau96I GGNCC 5 cut(s) 135, 540, 1271, 1307, 1423
ScaI AGTACT 1 cut(s) 221
SchI GAGTC 2 cut(s) 609, 947
ScrFI CCNGG 6 cut(s) 120, 370, 714, 1217, 1323, 1370
SduI GDGCHC 3 cut(s) 317, 690, 719
SexAI ACCWGGT 1 cut(s) 1368
SfaNI GCATC 2 cut(s) 752, 1006
SfcI CTRYAG 1 cut(s) 246
SinI GGWCC 4 cut(s) 540, 1271, 1307, 1423
SmiMI CAYNNNNRTG 3 cut(s) 440, 678, 1191
SmlI CTYRAG 1 cut(s) 467
SmoI CTYRAG 1 cut(s) 467
SpeI ACTAGT 1 cut(s) 31
Sse9I AATT 5 cut(s) 72, 332, 765, 830, 960
SsiI CCGC 3 cut(s) 318, 683, 908
SspMI CTAG 6 cut(s) 32, 87, 581, 656, 861, 1149
StyD4I CCNGG 6 cut(s) 118, 368, 712, 1215, 1321, 1368
StyI CCWWGG 2 cut(s) 86, 1444
TaaI ACNGT 4 cut(s) 103, 182, 972, 982
TaiI ACGT 2 cut(s) 17, 1116
TaqI TCGA 6 cut(s) 156, 528, 630, 1052, 1312, 1339
TaqII GACCGA 1 cut(s) 222
TasI AATT 5 cut(s) 72, 332, 765, 830, 960
TatI WGTACW 1 cut(s) 219
TfiI GAWTC 5 cut(s) 296, 805, 1049, 1341, 1380
Tru1I TTAA 3 cut(s) 623, 963, 1026
Tru9I TTAA 3 cut(s) 623, 963, 1026
TscAI CASTG 2 cut(s) 975, 985
TseFI GTSAC 3 cut(s) 511, 993, 1372
TseI GCWGC 4 cut(s) 245, 248, 320, 1138
Tsp45I GTSAC 3 cut(s) 511, 993, 1372
TspDTI ATGAA 7 cut(s) 10, 684, 818, 1074, 1112, 1348, 1448
TspGWI ACGGA 1 cut(s) 917
TspRI CASTG 2 cut(s) 975, 985
Tth111I GACNNNGTC 1 cut(s) 479
Van91I CCANNNNNTGG 2 cut(s) 1151, 1351
VneI GTGCAC 1 cut(s) 313
VpaK11BI GGWCC 4 cut(s) 540, 1271, 1307, 1423
XagI CCTNNNNNAGG 2 cut(s) 1299, 1443
XapI RAATTY 1 cut(s) 332
XmaJI CCTAGG 1 cut(s) 86
XmiI GTMKAC 2 cut(s) 458, 593
XmnI GAANNNNTTC 1 cut(s) 1224
XspI CTAG 6 cut(s) 32, 87, 581, 656, 861, 1149
ZrmI AGTACT 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.