Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000192

Physical Location & Seq

Genomic Coordinates Reverse (-)

14212174 .. 14213293

Gene Structure 1120 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G36140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGTATTTGACAATAATATTCCTCTTCATTAGCTCCATTATTTTCCCTCTCCTATTCTTCCTTGGAAAACATTTATCAAACTTCCGTTATCCCAACCTTCCTCCGGGAAAGATTGGCTTTCCCTTAATAGGAGAGACTTTATCCTTTCTCTCTGCTGGCCGTCAAGGCCACCCGGAGAAGTTTGTCACCGACCGAGTTCGTCATTTCTCCTCAGGTATCTTCAAGACCCACCTCTTTGGGTCTCCCTTCGCGGTGGTGACTGGTGCCTCTGGGAACAAGTTTCTATTCACCAACGAAAACAAGCTTGTGATCTCATGGTGGCCAGATTCGGTGAACAAGATCTTCCCTTCTTCAACGCAGACCAGCTCTAAGGAAGAGGCCATCAAGACGAGGATGCTTCTTATGCCGTCCATGAAGCCTGAGGCTTTGAGAAGGTATGTTGGTGTTATGGATGAGATTGCTCAGAAACATTTTGAGACGGAATGGGCCAACCAAGATCAACTTATTGTCTTCCCTCTCACCAAAAAGTTCACGTTTTCTATAGCATGCCGTTTGTTCCTGAGCATGGACGACCTCGAAAGAGTAAGAAAACTCGAAGAGCCATTCACTACGGTTATGACGGGTGTCTTCTCAATCCCAATAGATTTACCGGGAACACGGTTTAACCGTGCCATCAAGGCGTCAAGGTTACTCAGCAAAGAGGTTTCAACGATCATTAGGCAGAGAAAAGAAGAGCTGAAGGCCGGGAAAGTATCAGTGGAACAGGACATCCTATCTCATATGTTGATGAATATAGGAGAGACCAAAGACGAGGATTTGGCTGATAAGATTATTGCCTTGTTAATCGGAGGACATGACACAACAAGTATCGTATGCACATTCGTTGTCAACTATCTTGCTGAGTTCCCTCATATCTACCAACGTGTGCTAGAAGGTATGCAGATCCCTCTCCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009987 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016134 GO:0016135 GO:0016137 GO:0016138 GO:0016491 GO:0016705 GO:0016709 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044237 GO:0044238 GO:0044255 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

318

Amino Acids

36.15

Weight (kDa)

9.1

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 311	8.2e-14	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca	FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica	MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica	Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis	pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis	RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata	RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora	Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa	Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha	Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana	Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	263
AccII	CGCG	1 cut(s)	251
AciI	CCGC	1 cut(s)	251
AclWI	GGATC	1 cut(s)	937
AcoI	YGGCCR	2 cut(s)	157, 320
AcuI	CTGAAG	1 cut(s)	758
AcyI	GRCGYC	1 cut(s)	680
AfiI	CCNNNNNNNGG	3 cut(s)	103, 128, 565
AflIII	ACRYGT	1 cut(s)	922
AgsI	TTSAA	3 cut(s)	223, 354, 708
AloI	GAACNNNNNNTCC	2 cut(s)	753, 785
AluBI	AGCT	4 cut(s)	33, 304, 366, 736
AluI	AGCT	4 cut(s)	33, 304, 366, 736
Alw26I	GTCTC	4 cut(s)	128, 246, 470, 794
AlwI	GGATC	1 cut(s)	937
AoxI	GGCC	6 cut(s)	157, 166, 320, 378, 486, 741
AspS9I	GGNCC	1 cut(s)	486
AsuC2I	CCSGG	4 cut(s)	105, 173, 651, 745
AsuHPI	GGTGA	5 cut(s)	178, 268, 280, 343, 511
AxyI	CCTNAGG	2 cut(s)	211, 420
BalI	TGGCCA	1 cut(s)	322
BanI	GGYRCC	1 cut(s)	263
BbsI	GAAGAC	2 cut(s)	502, 619
BccI	CCATC	2 cut(s)	389, 680
BceAI	ACGGC	3 cut(s)	144, 391, 534
BcnI	CCSGG	4 cut(s)	105, 173, 651, 745
BcoDI	GTCTC	4 cut(s)	128, 246, 470, 794
BfaI	CTAG	1 cut(s)	929
BfmI	CTRYAG	1 cut(s)	540
BglI	GCCNNNNNGGC	2 cut(s)	165, 677
BglII	AGATCT	1 cut(s)	339
Bme1390I	CCNGG	4 cut(s)	105, 173, 651, 745
BmgT120I	GGNCC	1 cut(s)	486
BmiI	GGNNCC	1 cut(s)	265
BmrFI	CCNGG	4 cut(s)	105, 173, 651, 745
BmsI	GCATC	1 cut(s)	384
BoxI	GACNNNNGTC	1 cut(s)	623
BpiI	GAAGAC	2 cut(s)	502, 619
Bpu10I	CCTNAGC	1 cut(s)	560
BpuMI	CCSGG	4 cut(s)	105, 173, 651, 745
BsaHI	GRCGYC	1 cut(s)	680
BsaI	GGTCTC	2 cut(s)	246, 794
BsaJI	CCNNGG	1 cut(s)	61
Bsc4I	CCNNNNNNNGG	3 cut(s)	103, 128, 565
Bse1I	ACTGG	1 cut(s)	265
Bse21I	CCTNAGG	2 cut(s)	211, 420
BseDI	CCNNGG	1 cut(s)	61
BseGI	GGATG	3 cut(s)	399, 457, 768
BseLI	CCNNNNNNNGG	3 cut(s)	103, 128, 565
BseMII	CTCAG	6 cut(s)	225, 411, 476, 551, 706, 891
BseNI	ACTGG	1 cut(s)	265
BseRI	GAGGAG	1 cut(s)	199
Bsh1236I	CGCG	1 cut(s)	251
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	6 cut(s)	159, 168, 322, 380, 488, 743
BshNI	GGYRCC	1 cut(s)	263
BsiEI	CGRYCG	1 cut(s)	193
BsiSI	CCGG	4 cut(s)	104, 173, 650, 744
BslI	CCNNNNNNNGG	3 cut(s)	103, 128, 565
BsmAI	GTCTC	4 cut(s)	128, 246, 470, 794
BsmBI	CGTCTC	1 cut(s)	470
BsnI	GGCC	6 cut(s)	159, 168, 322, 380, 488, 743
Bso31I	GGTCTC	2 cut(s)	246, 794
Bsp143I	GATC	5 cut(s)	309, 339, 496, 711, 942
BspACI	CCGC	1 cut(s)	251
BspANI	GGCC	6 cut(s)	159, 168, 322, 380, 488, 743
BspCNI	CTCAG	6 cut(s)	224, 412, 475, 552, 705, 892
BspFNI	CGCG	1 cut(s)	251
BspLI	GGNNCC	1 cut(s)	265
BspPI	GGATC	1 cut(s)	937
BspQI	GCTCTTC	2 cut(s)	591, 726
BspT107I	GGYRCC	1 cut(s)	263
BspTNI	GGTCTC	2 cut(s)	246, 794
BsrI	ACTGG	1 cut(s)	265
BssECI	CCNNGG	1 cut(s)	61
BssMI	GATC	5 cut(s)	309, 339, 496, 711, 942
BssNI	GRCGYC	1 cut(s)	680
BssT1I	CCWWGG	1 cut(s)	61
Bst4CI	ACNGT	3 cut(s)	613, 660, 668
Bst6I	CTCTTC	4 cut(s)	29, 369, 591, 726
BstACI	GRCGYC	1 cut(s)	680
BstC8I	GCNNGC	2 cut(s)	157, 547
BstDEI	CTNAG	7 cut(s)	211, 369, 420, 462, 560, 692, 900
BstF5I	GGATG	3 cut(s)	399, 457, 768
BstFNI	CGCG	1 cut(s)	251
BstKTI	GATC	5 cut(s)	312, 342, 499, 714, 945
BstMAI	GTCTC	4 cut(s)	128, 246, 470, 794
BstMBI	GATC	5 cut(s)	309, 339, 496, 711, 942
BstMCI	CGRYCG	1 cut(s)	193
BstMWI	GCNNNNNNNGC	3 cut(s)	165, 403, 677
BstNSI	RCATGY	1 cut(s)	549
BstPAI	GACNNNNGTC	1 cut(s)	623
BstSCI	CCNGG	4 cut(s)	103, 171, 649, 743
BstSFI	CTRYAG	1 cut(s)	540
BstUI	CGCG	1 cut(s)	251
BstV2I	GAAGAC	2 cut(s)	502, 619
BstX2I	RGATCY	2 cut(s)	339, 942
BstXI	CCANNNNNNTGG	1 cut(s)	236
BstYI	RGATCY	2 cut(s)	339, 942
Bsu36I	CCTNAGG	2 cut(s)	211, 420
BsuRI	GGCC	6 cut(s)	159, 168, 322, 380, 488, 743
BtsCI	GGATG	3 cut(s)	399, 457, 768
BtsIMutI	CAGTG	1 cut(s)	762
Cac8I	GCNNGC	2 cut(s)	157, 547
Cfr13I	GGNCC	1 cut(s)	486
CseI	GACGC	1 cut(s)	669
CviAII	CATG	5 cut(s)	315, 412, 546, 565, 854
DdeI	CTNAG	7 cut(s)	211, 369, 420, 462, 560, 692, 900
DpnI	GATC	5 cut(s)	311, 341, 498, 713, 944
DpnII	GATC	5 cut(s)	309, 339, 496, 711, 942
EaeI	YGGCCR	2 cut(s)	157, 320
Eam1104I	CTCTTC	4 cut(s)	29, 369, 591, 726
EarI	CTCTTC	4 cut(s)	29, 369, 591, 726
Eco130I	CCWWGG	1 cut(s)	61
Eco31I	GGTCTC	2 cut(s)	246, 794
Eco57I	CTGAAG	1 cut(s)	758
Eco81I	CCTNAGG	2 cut(s)	211, 420
EcoT14I	CCWWGG	1 cut(s)	61
ErhI	CCWWGG	1 cut(s)	61
Esp3I	CGTCTC	1 cut(s)	470
FaeI	CATG	5 cut(s)	318, 415, 549, 568, 857
FalI	AAGNNNNNCTT	4 cut(s)	101, 133, 486, 518
FatI	CATG	5 cut(s)	314, 411, 545, 564, 853
FauNDI	CATATG	1 cut(s)	780
FokI	GGATG	3 cut(s)	406, 464, 755
FspBI	CTAG	1 cut(s)	929
HaeIII	GGCC	6 cut(s)	159, 168, 322, 380, 488, 743
HapII	CCGG	4 cut(s)	104, 173, 650, 744
HgaI	GACGC	1 cut(s)	669
Hin1I	GRCGYC	1 cut(s)	680
Hin1II	CATG	5 cut(s)	318, 415, 549, 568, 857
HincII	GTYRAC	1 cut(s)	889
HindII	GTYRAC	1 cut(s)	889
HindIII	AAGCTT	1 cut(s)	302
HinfI	GANTC	1 cut(s)	326
HpaII	CCGG	4 cut(s)	104, 173, 650, 744
HphI	GGTGA	5 cut(s)	178, 268, 280, 343, 511
Hpy166II	GTNNAC	3 cut(s)	334, 531, 889
Hpy188I	TCNGA	2 cut(s)	465, 848
Hpy188III	TCNNGA	3 cut(s)	223, 385, 559
Hpy8I	GTNNAC	3 cut(s)	334, 531, 889
HpyAV	CCTTC	6 cut(s)	107, 256, 357, 426, 733, 926
HpyCH4III	ACNGT	3 cut(s)	613, 660, 668
HpyCH4IV	ACGT	2 cut(s)	533, 922
HpyCH4V	TGCA	2 cut(s)	876, 940
HpyF10VI	GCNNNNNNNGC	3 cut(s)	165, 403, 677
HpyF3I	CTNAG	7 cut(s)	211, 369, 420, 462, 560, 692, 900
HpySE526I	ACGT	2 cut(s)	533, 922
Hsp92I	GRCGYC	1 cut(s)	680
Hsp92II	CATG	5 cut(s)	318, 415, 549, 568, 857
Kzo9I	GATC	5 cut(s)	309, 339, 496, 711, 942
LguI	GCTCTTC	2 cut(s)	591, 726
LmnI	GCTCC	1 cut(s)	38
LweI	GCATC	1 cut(s)	384
MaeI	CTAG	1 cut(s)	929
MaeII	ACGT	2 cut(s)	533, 922
MaeIII	GTNAC	3 cut(s)	184, 256, 687
MalI	GATC	5 cut(s)	311, 341, 498, 713, 944
MboI	GATC	5 cut(s)	309, 339, 496, 711, 942
MflI	RGATCY	2 cut(s)	339, 942
MlsI	TGGCCA	1 cut(s)	322
MluNI	TGGCCA	1 cut(s)	322
Mox20I	TGGCCA	1 cut(s)	322
MscI	TGGCCA	1 cut(s)	322
MseI	TTAA	4 cut(s)	125, 663, 842, 955
Msp20I	TGGCCA	1 cut(s)	322
MspI	CCGG	4 cut(s)	104, 173, 650, 744
MspR9I	CCNGG	4 cut(s)	105, 173, 651, 745
MvnI	CGCG	1 cut(s)	251
MwoI	GCNNNNNNNGC	3 cut(s)	165, 403, 677
NciI	CCSGG	4 cut(s)	105, 173, 651, 745
NdeI	CATATG	1 cut(s)	780
NdeII	GATC	5 cut(s)	309, 339, 496, 711, 942
NlaIII	CATG	5 cut(s)	318, 415, 549, 568, 857
NlaIV	GGNNCC	1 cut(s)	265
NmuCI	GTSAC	2 cut(s)	184, 256
NspI	RCATGY	1 cut(s)	549
PaeI	GCATGC	1 cut(s)	549
PciSI	GCTCTTC	2 cut(s)	591, 726
PcsI	WCGNNNNNNNCGW	1 cut(s)	664
PfeI	GAWTC	1 cut(s)	326
PfoI	TCCNGGA	1 cut(s)	103
PshAI	GACNNNNGTC	1 cut(s)	623
PspN4I	GGNNCC	1 cut(s)	265
PspPI	GGNCC	1 cut(s)	486
PsuI	RGATCY	2 cut(s)	339, 942
SapI	GCTCTTC	2 cut(s)	591, 726
SaqAI	TTAA	4 cut(s)	125, 663, 842, 955
Sau3AI	GATC	5 cut(s)	309, 339, 496, 711, 942
Sau96I	GGNCC	1 cut(s)	486
ScrFI	CCNGG	4 cut(s)	105, 173, 651, 745
SfaNI	GCATC	1 cut(s)	384
SfcI	CTRYAG	1 cut(s)	540
SfiI	GGCCNNNNNGGCC	1 cut(s)	165
SphI	GCATGC	1 cut(s)	549
SsiI	CCGC	1 cut(s)	251
SspI	AATATT	1 cut(s)	18
SspMI	CTAG	1 cut(s)	929
StyD4I	CCNGG	4 cut(s)	103, 171, 649, 743
StyI	CCWWGG	1 cut(s)	61
TaaI	ACNGT	3 cut(s)	613, 660, 668
TaiI	ACGT	2 cut(s)	536, 925
TaqI	TCGA	2 cut(s)	576, 594
TaqII	GACCGA	1 cut(s)	207
TfiI	GAWTC	1 cut(s)	326
Tru1I	TTAA	4 cut(s)	125, 663, 842, 955
Tru9I	TTAA	4 cut(s)	125, 663, 842, 955
TscAI	CASTG	1 cut(s)	762
TseFI	GTSAC	2 cut(s)	184, 256
Tsp45I	GTSAC	2 cut(s)	184, 256
TspDTI	ATGAA	3 cut(s)	16, 428, 803
TspGWI	ACGGA	2 cut(s)	74, 494
TspRI	CASTG	1 cut(s)	762
XceI	RCATGY	1 cut(s)	549
XspI	CTAG	1 cut(s)	929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.