Rroxscaffold_3G00236820

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000192
Physical Location & Seq
Forward (+)
24245126 .. 24247214
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00236820.1

Sequence Viewer

Length: 1593 bp
ATGGAGATTGAGATGGAGATGCTCATCTTTTCTGTGTTAGTTCTCTTTGTTTCTCTGTACCATCTTTTTCGTATGTTGAATAGAAATGCTAGCAAAAATGAAGTTGATCATCATCAGCTTCAGCTCCCACCAGGAAGCTCAGGTTGGCCCATCATCGGTGAAGGCCTTGCTTTTATGATGACAGCCAAAAGGGGTGTCCCGGAGAAGTTCATAGAAGAAAGGAGGATCAAGTACTCATCATCACATTCCAAAATCAGCAACAGTAGCTGCAAGGTGTTCACCACATCGTTGCTGCGTGAATCTGTGGCGGTGCTATGTACTGCCGCTGGAAACAAGTTCCTGTTTTCAAACGAGAACAAACTCGTCCACTCATGGTGGCCCGATACCATCTACACCATCTTTGCCGGACTCGACAAACCAGACACCCACGAGGATTCCATTCGACTCCGCAAAGTTCTTTCTCCATTTTTCAGCCCCAATTGTCTCCAAAAGTATGTAGGGACCATGGATGCCTTCACCAAACATCATATGGACGTGTTTTGGTCGGATAAAAAACAAGTCAAAGTTCTGGCCTTAACAAAGATGCACACCTTCACATTGGTGTGTAAAATCTTCTTAAACGTGGAGGATCCAGCAGTGATTGCCAAACTGGACGAGCCAATTCAGCATATCGCAGCAGGCTTCATTTCGGCGTTGCCGATAAATCTGCCTGGCACAGCATTCAACCGAGCCATCCGAGCATCCAAGCAAGTCAGGAAGGACCTTGAAGAAATGGTTGAACAGAGGAGAATCGATCTAGATCGATATCGACAGACCGCTATGGCAGCAGATCTAGATGAGAGTAATAATAATAATAATGATCAAGATTTGATGTCTAAGTTGCTGATGGACACATATAGCAACGGCCGACAGATGAAGGAAACCGACATCTCTGACATCGCCAACAAGTTAAAGGGTCTACTCATTGCCGCTTCTGACAACGTAGTCGCCACCTTGTGTTCTATCGTCATGTATCTATCCGAGCTTCCTACTGTTTATGAAGCCGTCCTCAAAGTGATACTAAAACGTAGAATTAATGAATCGCTTTTGTCAGAGCAAATGGAGATAGCAGATTCAAAAGCAGATGGAGAATTGCTCAACTGGGGGGACATACAAAAAATGAAATATACATGGAACGTCGCATGTGAAGTGTTGAGATTGGAGCCGCCAAATCCTGGAACTTTTAGAGAGGCCATGACCGACTTTGTCTATGAAGGATATCTGATTCCTAAAGGAATGAAGTTATACTGGAGTGTGTTTTCGACACATAAAAACCCAGAGTACTTCCCAGATCCGAAAAAGTTTGACCCCTCAAGGTTCGACGGAGGAGGACCGGCTTCTTTTTCGTACGTCCCATTTGGAGGAGGACCTCGGATGTGCCCCGGAAGAGAATATGCTCGTTTTACGATTTTAGTTTTCATGCATAACTTGGTCACCAGATTCAGGTGGGAGAAGATTTTTCCCGATGAGAAAATGGTGATGACTCCATTTCTTCTTCCTACCAAAGGACTTCCGGTTCGCCTTTATCCTCATCCGTCAACATCAGCATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

530

Amino Acids

60.47

Weight (kDa)

8.28

Isoelectric Point (pI)

43.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 82 - 516 3e-46 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 983
AccB7I CCANNNNNTGG 1 cut(s) 1214
AccI GTMKAC 1 cut(s) 958
AciI CCGC 6 cut(s) 308, 324, 448, 816, 969, 1205
AclWI GGATC 4 cut(s) 233, 623, 636, 1325
AcoI YGGCCR 1 cut(s) 904
AcuI CTGAAG 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 996
AfaI GTAC 5 cut(s) 59, 233, 319, 1322, 1388
AfiI CCNNNNNNNGG 5 cut(s) 155, 1214, 1400, 1482, 1544
AflIII ACRYGT 1 cut(s) 534
AgsI TTSAA 6 cut(s) 79, 348, 724, 767, 779, 1116
AjiI CACGTC 1 cut(s) 535
AjnI CCWGG 3 cut(s) 130, 709, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AleI CACNNNNGTG 1 cut(s) 599
AloI GAACNNNNNNTCC 2 cut(s) 1539, 1571
AluBI AGCT 5 cut(s) 118, 124, 138, 267, 1024
AluI AGCT 5 cut(s) 118, 124, 138, 267, 1024
Alw26I GTCTC 1 cut(s) 488
AlwI GGATC 4 cut(s) 233, 623, 636, 1325
AlwNI CAGNNNCTG 1 cut(s) 267
AoxI GGCC 6 cut(s) 146, 163, 377, 570, 904, 1230
ApeKI GCWGC 4 cut(s) 267, 292, 674, 824
ArsI GACNNNNNNTTYG 4 cut(s) 180, 212, 1539, 1571
AseI ATTAAT 1 cut(s) 1074
AspS9I GGNCC 6 cut(s) 147, 378, 501, 760, 1370, 1406
AsuC2I CCSGG 2 cut(s) 200, 1422
AsuHPI GGTGA 5 cut(s) 170, 271, 508, 1465, 1528
AsuNHI GCTAGC 1 cut(s) 89
AvaII GGWCC 4 cut(s) 501, 760, 1370, 1406
BaeGI GKGCMC 1 cut(s) 1421
BamHI GGATCC 1 cut(s) 628
BauI CACGAG 1 cut(s) 428
BbvI GCAGC 4 cut(s) 254, 279, 686, 836
BccI CCATC 8 cut(s) 7, 69, 158, 395, 404, 740, 880, 1118
BceAI ACGGC 2 cut(s) 919, 1028
BcgI CGANNNNNNTGC 2 cut(s) 688, 722
BciT130I CCWGG 3 cut(s) 132, 711, 1215
BclI TGATCA 2 cut(s) 106, 859
BcnI CCSGG 2 cut(s) 200, 1422
BcoDI GTCTC 1 cut(s) 488
BfaI CTAG 3 cut(s) 90, 797, 833
BglII AGATCT 1 cut(s) 829
BisI GCNGC 7 cut(s) 268, 293, 324, 675, 825, 969, 1205
BlsI GCNGC 7 cut(s) 269, 294, 325, 676, 826, 970, 1206
BmcAI AGTACT 2 cut(s) 233, 1322
Bme1390I CCNGG 5 cut(s) 132, 200, 711, 1215, 1422
Bme18I GGWCC 4 cut(s) 501, 760, 1370, 1406
BmgBI CACGTC 1 cut(s) 535
BmgT120I GGNCC 6 cut(s) 147, 378, 501, 760, 1370, 1406
BmiI GGNNCC 3 cut(s) 502, 630, 1203
BmrFI CCNGG 5 cut(s) 132, 200, 711, 1215, 1422
BmrI ACTGGG 1 cut(s) 1150
BmsI GCATC 4 cut(s) 9, 499, 573, 749
BmtI GCTAGC 1 cut(s) 93
BmuI ACTGGG 1 cut(s) 1150
BplI GAGNNNNNCTC 2 cut(s) 1119, 1151
BpmI CTGGAG 1 cut(s) 1309
Bpu10I CCTNAGC 1 cut(s) 139
BpuEI CTTGAG 1 cut(s) 1336
BpuMI CCSGG 2 cut(s) 200, 1422
Bsa29I ATCGAT 2 cut(s) 792, 802
BsaBI GATNNNNATC 4 cut(s) 23, 111, 798, 804
BsaJI CCNNGG 3 cut(s) 504, 1409, 1420
BsaWI WCCGGW 1 cut(s) 1552
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 1214, 1400, 1482, 1544
Bse118I RCCGGY 1 cut(s) 1372
Bse1I ACTGG 3 cut(s) 654, 1145, 1292
Bse3DI GCAATG 1 cut(s) 963
Bse8I GATNNNNATC 4 cut(s) 23, 111, 798, 804
BseBI CCWGG 3 cut(s) 132, 711, 1215
BseCI ATCGAT 2 cut(s) 792, 802
BseDI CCNNGG 3 cut(s) 504, 1409, 1420
BseGI GGATG 5 cut(s) 514, 732, 740, 1419, 1570
BseJI GATNNNNATC 4 cut(s) 23, 111, 798, 804
BseLI CCNNNNNNNGG 5 cut(s) 155, 1214, 1400, 1482, 1544
BseMI GCAATG 1 cut(s) 963
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 3 cut(s) 654, 1145, 1292
BseRI GAGGAG 3 cut(s) 799, 1380, 1416
BseSI GKGCMC 1 cut(s) 1421
BseX3I CGGCCG 1 cut(s) 904
BseXI GCAGC 4 cut(s) 254, 279, 686, 836
Bsh1285I CGRYCG 1 cut(s) 907
BshFI GGCC 6 cut(s) 148, 165, 379, 572, 906, 1232
BshVI ATCGAT 2 cut(s) 792, 802
BsiEI CGRYCG 1 cut(s) 907
BsiSI CCGG 5 cut(s) 200, 405, 1373, 1422, 1553
BsiWI CGTACG 1 cut(s) 1386
BslFI GGGAC 4 cut(s) 182, 514, 1160, 1376
BslI CCNNNNNNNGG 5 cut(s) 155, 1214, 1400, 1482, 1544
BsmAI GTCTC 1 cut(s) 488
BsmFI GGGAC 4 cut(s) 182, 514, 1160, 1376
BsmI GAATGC 1 cut(s) 719
BsnI GGCC 6 cut(s) 148, 165, 379, 572, 906, 1232
Bsp1286I GDGCHC 1 cut(s) 1421
Bsp143I GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
Bsp19I CCATGG 1 cut(s) 504
BspACI CCGC 6 cut(s) 308, 324, 448, 816, 969, 1205
BspANI GGCC 6 cut(s) 148, 165, 379, 572, 906, 1232
BspCNI CTCAG 1 cut(s) 152
BspDI ATCGAT 2 cut(s) 792, 802
BspLI GGNNCC 3 cut(s) 502, 630, 1203
BspOI GCTAGC 1 cut(s) 93
BspPI GGATC 4 cut(s) 233, 623, 636, 1325
BsrDI GCAATG 1 cut(s) 963
BsrFI RCCGGY 1 cut(s) 1372
BsrI ACTGG 3 cut(s) 654, 1145, 1292
BssAI RCCGGY 1 cut(s) 1372
BssECI CCNNGG 3 cut(s) 504, 1409, 1420
BssMI GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
BssSI CACGAG 1 cut(s) 428
BssT1I CCWWGG 1 cut(s) 504
Bst2BI CACGAG 1 cut(s) 428
Bst2UI CCWGG 3 cut(s) 132, 711, 1215
Bst4CI ACNGT 2 cut(s) 263, 1033
Bst6I CTCTTC 1 cut(s) 1420
BstAPI GCANNNNNTGC 1 cut(s) 641
BstC8I GCNNGC 2 cut(s) 91, 679
BstDEI CTNAG 2 cut(s) 139, 876
BstDSI CCRYGG 1 cut(s) 504
BstEII GGTNACC 1 cut(s) 1471
BstENI CCTNNNNNAGG 1 cut(s) 1542
BstF5I GGATG 5 cut(s) 514, 732, 740, 1419, 1570
BstKTI GATC 8 cut(s) 109, 228, 631, 796, 802, 832, 862, 1333
BstMAI GTCTC 1 cut(s) 488
BstMBI GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
BstMCI CGRYCG 1 cut(s) 907
BstMWI GCNNNNNNNGC 5 cut(s) 264, 641, 664, 737, 824
BstNI CCWGG 3 cut(s) 132, 711, 1215
BstNSI RCATGY 1 cut(s) 1185
BstPI GGTNACC 1 cut(s) 1471
BstSCI CCNGG 5 cut(s) 130, 198, 709, 1213, 1420
BstSLI GKGCMC 1 cut(s) 1421
BstV1I GCAGC 4 cut(s) 254, 279, 686, 836
BstX2I RGATCY 3 cut(s) 628, 829, 1330
BstYI RGATCY 3 cut(s) 628, 829, 1330
BstZI CGGCCG 1 cut(s) 904
Bsu15I ATCGAT 2 cut(s) 792, 802
BsuRI GGCC 6 cut(s) 148, 165, 379, 572, 906, 1232
BsuTUI ATCGAT 2 cut(s) 792, 802
BtgI CCRYGG 1 cut(s) 504
BtgZI GCGATG 1 cut(s) 922
BtrI CACGTC 1 cut(s) 535
BtsCI GGATG 5 cut(s) 514, 732, 740, 1419, 1570
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 1 cut(s) 642
Cac8I GCNNGC 2 cut(s) 91, 679
CaiI CAGNNNCTG 1 cut(s) 267
Cfr10I RCCGGY 1 cut(s) 1372
Cfr13I GGNCC 6 cut(s) 147, 378, 501, 760, 1370, 1406
ClaI ATCGAT 2 cut(s) 792, 802
Csp6I GTAC 5 cut(s) 58, 232, 318, 1321, 1387
CviAII CATG 7 cut(s) 372, 505, 1009, 1170, 1182, 1234, 1459
CviQI GTAC 5 cut(s) 58, 232, 318, 1321, 1387
DdeI CTNAG 2 cut(s) 139, 876
DpnI GATC 8 cut(s) 108, 227, 630, 795, 801, 831, 861, 1332
DpnII GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
DraIII CACNNNGTG 1 cut(s) 996
DrdI GACNNNNNNGTC 1 cut(s) 983
DseDI GACNNNNNNGTC 1 cut(s) 983
EaeI YGGCCR 1 cut(s) 904
EagI CGGCCG 1 cut(s) 904
Eam1104I CTCTTC 1 cut(s) 1420
EarI CTCTTC 1 cut(s) 1420
EclXI CGGCCG 1 cut(s) 904
Eco130I CCWWGG 1 cut(s) 504
Eco147I AGGCCT 1 cut(s) 165
Eco32I GATATC 2 cut(s) 806, 1259
Eco47I GGWCC 4 cut(s) 501, 760, 1370, 1406
Eco52I CGGCCG 1 cut(s) 904
Eco57I CTGAAG 1 cut(s) 104
Eco91I GGTNACC 1 cut(s) 1471
EcoNI CCTNNNNNAGG 1 cut(s) 1542
EcoO109I RGGNCCY 2 cut(s) 760, 1406
EcoO65I GGTNACC 1 cut(s) 1471
EcoRII CCWGG 3 cut(s) 130, 709, 1213
EcoRV GATATC 2 cut(s) 806, 1259
EcoT14I CCWWGG 1 cut(s) 504
EcoT22I ATGCAT 1 cut(s) 1464
ErhI CCWWGG 1 cut(s) 504
FaeI CATG 7 cut(s) 375, 508, 1012, 1173, 1185, 1237, 1462
FaqI GGGAC 4 cut(s) 182, 514, 1160, 1376
FatI CATG 7 cut(s) 371, 504, 1008, 1169, 1181, 1233, 1458
FauNDI CATATG 1 cut(s) 528
FbaI TGATCA 2 cut(s) 106, 859
FblI GTMKAC 1 cut(s) 958
Fnu4HI GCNGC 7 cut(s) 268, 293, 324, 675, 825, 969, 1205
FokI GGATG 5 cut(s) 521, 719, 727, 1426, 1557
Fsp4HI GCNGC 7 cut(s) 268, 293, 324, 675, 825, 969, 1205
FspBI CTAG 3 cut(s) 90, 797, 833
GluI GCNGC 7 cut(s) 268, 293, 324, 675, 825, 969, 1205
GsuI CTGGAG 1 cut(s) 1309
HaeIII GGCC 6 cut(s) 148, 165, 379, 572, 906, 1232
HapII CCGG 5 cut(s) 200, 405, 1373, 1422, 1553
Hin1II CATG 7 cut(s) 375, 508, 1012, 1173, 1185, 1237, 1462
HincII GTYRAC 1 cut(s) 1578
HindII GTYRAC 1 cut(s) 1578
HpaII CCGG 5 cut(s) 200, 405, 1373, 1422, 1553
HphI GGTGA 5 cut(s) 170, 271, 508, 1465, 1528
Hpy166II GTNNAC 4 cut(s) 279, 367, 959, 1578
Hpy188I TCNGA 9 cut(s) 547, 737, 934, 976, 1021, 1093, 1263, 1335, 1413
Hpy188III TCNNGA 5 cut(s) 754, 797, 833, 863, 1502
Hpy8I GTNNAC 4 cut(s) 279, 367, 959, 1578
Hpy99I CGWCG 2 cut(s) 1181, 1364
HpyAV CCTTC 6 cut(s) 155, 523, 601, 751, 910, 1247
HpyCH4III ACNGT 2 cut(s) 263, 1033
HpyCH4IV ACGT 6 cut(s) 534, 621, 981, 1066, 1176, 1389
HpyCH4V TGCA 3 cut(s) 270, 586, 1462
HpyF10VI GCNNNNNNNGC 5 cut(s) 264, 641, 664, 737, 824
HpyF3I CTNAG 2 cut(s) 139, 876
HpySE526I ACGT 6 cut(s) 534, 621, 981, 1066, 1176, 1389
Hsp92II CATG 7 cut(s) 375, 508, 1012, 1173, 1185, 1237, 1462
Ksp22I TGATCA 2 cut(s) 106, 859
Kzo9I GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
LmnI GCTCC 2 cut(s) 129, 1201
Lsp1109I GCAGC 4 cut(s) 254, 279, 686, 836
LweI GCATC 4 cut(s) 9, 499, 573, 749
MaeI CTAG 3 cut(s) 90, 797, 833
MaeII ACGT 6 cut(s) 534, 621, 981, 1066, 1176, 1389
MaeIII GTNAC 1 cut(s) 1471
MalI GATC 8 cut(s) 108, 227, 630, 795, 801, 831, 861, 1332
MboI GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
MboII GAAGA 7 cut(s) 227, 604, 779, 1437, 1504, 1523, 1526
MfeI CAATTG 1 cut(s) 478
MflI RGATCY 3 cut(s) 628, 829, 1330
MhlI GDGCHC 1 cut(s) 1421
MluCI AATT 4 cut(s) 478, 660, 1071, 1130
MlyI GAGTC 3 cut(s) 402, 438, 1516
MmeI TCCRAC 1 cut(s) 525
Mph1103I ATGCAT 1 cut(s) 1464
MseI TTAA 4 cut(s) 575, 617, 950, 1074
MslI CAYNNNNRTG 2 cut(s) 599, 601
MspA1I CMGCKG 1 cut(s) 326
MspI CCGG 5 cut(s) 200, 405, 1373, 1422, 1553
MspR9I CCNGG 5 cut(s) 132, 200, 711, 1215, 1422
MunI CAATTG 1 cut(s) 478
Mva1269I GAATGC 1 cut(s) 719
MvaI CCWGG 3 cut(s) 132, 711, 1215
MwoI GCNNNNNNNGC 5 cut(s) 264, 641, 664, 737, 824
NciI CCSGG 2 cut(s) 200, 1422
NcoI CCATGG 1 cut(s) 504
NdeI CATATG 1 cut(s) 528
NdeII GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
NheI GCTAGC 1 cut(s) 89
NlaIII CATG 7 cut(s) 375, 508, 1012, 1173, 1185, 1237, 1462
NlaIV GGNNCC 3 cut(s) 502, 630, 1203
NmuCI GTSAC 1 cut(s) 1471
NsiI ATGCAT 1 cut(s) 1464
NspI RCATGY 1 cut(s) 1185
OliI CACNNNNGTG 1 cut(s) 599
PceI AGGCCT 1 cut(s) 165
PcsI WCGNNNNNNNCGW 1 cut(s) 695
PctI GAATGC 1 cut(s) 719
PfeI GAWTC 7 cut(s) 299, 434, 789, 1079, 1112, 1264, 1479
Pfl23II CGTACG 1 cut(s) 1386
PflFI GACNNNGTC 1 cut(s) 1244
PflMI CCANNNNNTGG 1 cut(s) 1214
PfoI TCCNGGA 2 cut(s) 198, 1213
PkrI GCNGC 7 cut(s) 269, 294, 325, 676, 826, 970, 1206
PleI GAGTC 3 cut(s) 402, 438, 1516
PpsI GAGTC 3 cut(s) 402, 438, 1516
PpuMI RGGWCCY 2 cut(s) 760, 1406
PshBI ATTAAT 1 cut(s) 1074
Psp5II RGGWCCY 2 cut(s) 760, 1406
Psp6I CCWGG 3 cut(s) 130, 709, 1213
PspEI GGTNACC 1 cut(s) 1471
PspGI CCWGG 3 cut(s) 130, 709, 1213
PspLI CGTACG 1 cut(s) 1386
PspN4I GGNNCC 3 cut(s) 502, 630, 1203
PspPI GGNCC 6 cut(s) 147, 378, 501, 760, 1370, 1406
PspPPI RGGWCCY 2 cut(s) 760, 1406
PstNI CAGNNNCTG 1 cut(s) 267
PsuI RGATCY 3 cut(s) 628, 829, 1330
PsyI GACNNNGTC 1 cut(s) 1244
RsaI GTAC 5 cut(s) 59, 233, 319, 1322, 1388
RsaNI GTAC 5 cut(s) 58, 232, 318, 1321, 1387
RseI CAYNNNNRTG 2 cut(s) 599, 601
SaqAI TTAA 4 cut(s) 575, 617, 950, 1074
SatI GCNGC 7 cut(s) 268, 293, 324, 675, 825, 969, 1205
Sau3AI GATC 8 cut(s) 106, 225, 628, 793, 799, 829, 859, 1330
Sau96I GGNCC 6 cut(s) 147, 378, 501, 760, 1370, 1406
ScaI AGTACT 2 cut(s) 233, 1322
SchI GAGTC 3 cut(s) 402, 438, 1516
ScrFI CCNGG 5 cut(s) 132, 200, 711, 1215, 1422
SduI GDGCHC 1 cut(s) 1421
SfaNI GCATC 4 cut(s) 9, 499, 573, 749
SinI GGWCC 4 cut(s) 501, 760, 1370, 1406
SmiMI CAYNNNNRTG 2 cut(s) 599, 601
SmlI CTYRAG 1 cut(s) 1351
SmoI CTYRAG 1 cut(s) 1351
Sse9I AATT 4 cut(s) 478, 660, 1071, 1130
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 6 cut(s) 308, 324, 448, 816, 969, 1205
SspMI CTAG 3 cut(s) 90, 797, 833
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 5 cut(s) 130, 198, 709, 1213, 1420
StyI CCWWGG 1 cut(s) 504
TaaI ACNGT 2 cut(s) 263, 1033
TaiI ACGT 6 cut(s) 537, 624, 984, 1069, 1179, 1392
TaqI TCGA 7 cut(s) 411, 442, 792, 802, 808, 1301, 1359
TaqII GACCGA 1 cut(s) 1253
TasI AATT 4 cut(s) 478, 660, 1071, 1130
TatI WGTACW 3 cut(s) 231, 317, 1320
TauI GCSGC 3 cut(s) 326, 971, 1207
TfiI GAWTC 7 cut(s) 299, 434, 789, 1079, 1112, 1264, 1479
Tru1I TTAA 4 cut(s) 575, 617, 950, 1074
Tru9I TTAA 4 cut(s) 575, 617, 950, 1074
TscAI CASTG 1 cut(s) 642
TseFI GTSAC 1 cut(s) 1471
TseI GCWGC 4 cut(s) 267, 292, 674, 824
Tsp45I GTSAC 1 cut(s) 1471
TspGWI ACGGA 2 cut(s) 1377, 1563
TspRI CASTG 1 cut(s) 642
Tth111I GACNNNGTC 1 cut(s) 1244
Van91I CCANNNNNTGG 1 cut(s) 1214
VpaK11BI GGWCC 4 cut(s) 501, 760, 1370, 1406
VspI ATTAAT 1 cut(s) 1074
XagI CCTNNNNNAGG 1 cut(s) 1542
XbaI TCTAGA 2 cut(s) 796, 832
XceI RCATGY 1 cut(s) 1185
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XmiI GTMKAC 1 cut(s) 958
XspI CTAG 3 cut(s) 90, 797, 833
ZrmI AGTACT 2 cut(s) 233, 1322
Zsp2I ATGCAT 1 cut(s) 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.