Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000192

Physical Location & Seq

Genomic Coordinates Reverse (-)

442501 .. 446129

Gene Structure 3629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG002200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGAGCTTAACTTCTACCTCACCCTCCTGTTGGGCTTTGTTTCCTTCGTCACCTTTTCTCTCTTCTTCCTCTTCTACAGGCACAGATCTCAGTTCACCGGCAACAACCTCCCTCCGGGGAAGGTCGGCTACCCGGTGATAGGAGAGAGCTACGAGTTCCTAGCCACGGGATGGAAAGGCCACCCCGAGAAATTCATCTTTGACCGCATGACCAAGTACTCCTCCGAAGTCTTCAAGACCTCCATCTTCGGCGAGAAGGCTTGCATCTTTGCCGGCGCCGCCTGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTCGTCACTGCCTGGTGGCCTAGCTCCGTCAACAAGGTCTTCCCTTCTTCCATGGAGACTTCCGCCAAAGAGGAGGCCAAGAAGATGAGGAAGATGCTCCCCAACTTCATGAACCCTCAGGCTCTTCAACGCTACATCGGAATCATGGACACCATCGCTCAACGACACTTTGCTGATGGCTGGGAAAACAAGAAGGAAGTCGAGGTCTTCCCCCTTGCCAAGAACTACACATTTTGGCTGGCTGCACGACTGTTCGTTAGCCTTGAGGACCCAAAGGACGTAGACAAATTCGGCGACCCCTTCCAACTGTTGGCCTCCGGAATCATCTCGATGCCAATTGACTTCCCCGGAACACCGTTCTATAAAGCCATCAAGGCCTCCAACTGGATCAGGGAGGAGCTGTACAAGATCATCAAGCAGAGGAAGATCGACTTGGCCGAGGGCAAGGCGTCACCCACCCAAGACATATTGTCCCACATGCTCTTGACTTGCGACGAGGAAGGAACCTACATGAAGGAGATGGACATCGCCGATAAGATTCTCGGATTGTTGATCGGAGGCCACGACACAGCCAGCGCCACCTGCACTTTCATTGTCAAGTACCTTGGAGAGCTCCCTCATATCTATGATGCAGTCTACAAGGGTAATTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009987 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016134 GO:0016135 GO:0016137 GO:0016138 GO:0016491 GO:0016705 GO:0016709 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044237 GO:0044238 GO:0044255 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

322

Amino Acids

36.78

Weight (kDa)

7.63

Isoelectric Point (pI)

38.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	38 - 319	1.6e-11	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca	FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica	MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica	Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis	pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis	RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata	RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora	Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa	Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha	Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana	Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	905
Acc36I	ACCTGC	1 cut(s)	905
AccB1I	GGYRCC	1 cut(s)	275
AccB7I	CCANNNNNTGG	2 cut(s)	171, 625
AccI	GTMKAC	2 cut(s)	597, 951
AccIII	TCCGGA	1 cut(s)	632
AciI	CCGC	3 cut(s)	205, 279, 378
AclWI	GGATC	1 cut(s)	710
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	2 cut(s)	191, 602
AcyI	GRCGYC	2 cut(s)	276, 764
AfaI	GTAC	3 cut(s)	218, 719, 917
AfiI	CCNNNNNNNGG	7 cut(s)	31, 115, 140, 166, 171, 625, 699
AgsI	TTSAA	2 cut(s)	235, 443
AhdI	GACNNNNNGTC	1 cut(s)	784
AjnI	CCWGG	1 cut(s)	326
AjuI	GAANNNNNNNTTGG	2 cut(s)	731, 763
AluBI	AGCT	6 cut(s)	7, 150, 316, 339, 715, 928
AluI	AGCT	6 cut(s)	7, 150, 316, 339, 715, 928
Alw21I	GWGCWC	1 cut(s)	930
Alw26I	GTCTC	1 cut(s)	365
AlwI	GGATC	1 cut(s)	710
Ama87I	CYCGRG	1 cut(s)	185
Aor13HI	TCCGGA	1 cut(s)	632
AoxI	GGCC	7 cut(s)	178, 332, 390, 627, 690, 750, 874
ApeKI	GCWGC	1 cut(s)	557
ApoI	RAATTY	2 cut(s)	191, 602
AspLEI	GCGC	2 cut(s)	278, 893
AspS9I	GGNCC	1 cut(s)	583
AsuC2I	CCSGG	3 cut(s)	117, 134, 663
AsuHPI	GGTGA	5 cut(s)	13, 43, 88, 148, 759
AvaI	CYCGRG	1 cut(s)	185
AvaII	GGWCC	1 cut(s)	583
AxyI	CCTNAGG	1 cut(s)	432
BanI	GGYRCC	1 cut(s)	275
BanII	GRGCYC	1 cut(s)	930
BarI	GAAGNNNNNNTAC	2 cut(s)	113, 145
BbsI	GAAGAC	3 cut(s)	223, 346, 514
Bbv12I	GWGCWC	1 cut(s)	930
BbvI	GCAGC	1 cut(s)	544
BccI	CCATC	6 cut(s)	165, 251, 476, 485, 692, 829
BciT130I	CCWGG	1 cut(s)	328
BcnI	CCSGG	3 cut(s)	117, 134, 663
BcoDI	GTCTC	1 cut(s)	365
BfaI	CTAG	2 cut(s)	161, 336
BfmI	CTRYAG	1 cut(s)	76
BfoI	RGCGCY	2 cut(s)	279, 894
BfuAI	ACCTGC	1 cut(s)	905
BglI	GCCNNNNNGGC	1 cut(s)	689
BglII	AGATCT	1 cut(s)	86
BisI	GCNGC	2 cut(s)	279, 558
BlsI	GCNGC	2 cut(s)	280, 559
BmcAI	AGTACT	1 cut(s)	218
Bme1390I	CCNGG	4 cut(s)	117, 134, 328, 663
Bme18I	GGWCC	1 cut(s)	583
BmeRI	GACNNNNNGTC	1 cut(s)	784
BmeT110I	CYCGRG	1 cut(s)	185
BmgT120I	GGNCC	1 cut(s)	583
BmiI	GGNNCC	3 cut(s)	277, 585, 820
BmrFI	CCNGG	4 cut(s)	117, 134, 328, 663
BmsI	GCATC	4 cut(s)	273, 399, 636, 934
BpiI	GAAGAC	3 cut(s)	223, 346, 514
BpuEI	CTTGAG	1 cut(s)	599
BpuMI	CCSGG	3 cut(s)	117, 134, 663
BsaBI	GATNNNNATC	1 cut(s)	839
BsaHI	GRCGYC	2 cut(s)	276, 764
BsaJI	CCNNGG	6 cut(s)	116, 165, 366, 661, 753, 919
BsaWI	WCCGGW	1 cut(s)	632
BsaXI	ACNNNNNCTCC	2 cut(s)	701, 731
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 115, 140, 166, 171, 625, 699
Bse118I	RCCGGY	2 cut(s)	98, 272
Bse1I	ACTGG	1 cut(s)	704
Bse21I	CCTNAGG	1 cut(s)	432
Bse8I	GATNNNNATC	1 cut(s)	839
BseAI	TCCGGA	1 cut(s)	632
BseBI	CCWGG	1 cut(s)	328
BseDI	CCNNGG	6 cut(s)	116, 165, 366, 661, 753, 919
BseGI	GGATG	1 cut(s)	176
BseJI	GATNNNNATC	1 cut(s)	839
BseLI	CCNNNNNNNGG	7 cut(s)	31, 115, 140, 166, 171, 625, 699
BseMII	CTCAG	2 cut(s)	104, 446
BseNI	ACTGG	1 cut(s)	704
BseRI	GAGGAG	3 cut(s)	211, 401, 725
BseXI	GCAGC	1 cut(s)	544
BseYI	CCCAGC	1 cut(s)	495
BsgI	GTGCAG	2 cut(s)	543, 883
BshFI	GGCC	7 cut(s)	180, 334, 392, 629, 692, 752, 876
BshNI	GGYRCC	1 cut(s)	275
BsiHKAI	GWGCWC	1 cut(s)	930
BsiHKCI	CYCGRG	1 cut(s)	185
BsiSI	CCGG	6 cut(s)	99, 116, 134, 273, 633, 663
BslFI	GGGAC	1 cut(s)	772
BslI	CCNNNNNNNGG	7 cut(s)	31, 115, 140, 166, 171, 625, 699
BsmAI	GTCTC	1 cut(s)	365
BsmFI	GGGAC	1 cut(s)	772
BsnI	GGCC	7 cut(s)	180, 334, 392, 629, 692, 752, 876
BsoBI	CYCGRG	1 cut(s)	185
Bsp1286I	GDGCHC	1 cut(s)	930
Bsp13I	TCCGGA	1 cut(s)	632
Bsp1407I	TGTACA	1 cut(s)	717
Bsp143I	GATC	5 cut(s)	86, 702, 723, 741, 867
Bsp19I	CCATGG	1 cut(s)	366
BspACI	CCGC	3 cut(s)	205, 279, 378
BspANI	GGCC	7 cut(s)	180, 334, 392, 629, 692, 752, 876
BspCNI	CTCAG	2 cut(s)	103, 445
BspEI	TCCGGA	1 cut(s)	632
BspHI	TCATGA	1 cut(s)	423
BspLI	GGNNCC	3 cut(s)	277, 585, 820
BspMI	ACCTGC	1 cut(s)	905
BspPI	GGATC	1 cut(s)	710
BspQI	GCTCTTC	1 cut(s)	444
BspT107I	GGYRCC	1 cut(s)	275
BsrFI	RCCGGY	2 cut(s)	98, 272
BsrGI	TGTACA	1 cut(s)	717
BsrI	ACTGG	1 cut(s)	704
BssAI	RCCGGY	2 cut(s)	98, 272
BssECI	CCNNGG	6 cut(s)	116, 165, 366, 661, 753, 919
BssMI	GATC	5 cut(s)	86, 702, 723, 741, 867
BssNI	GRCGYC	2 cut(s)	276, 764
BssT1I	CCWWGG	2 cut(s)	366, 919
Bst2UI	CCWGG	1 cut(s)	328
Bst4CI	ACNGT	3 cut(s)	567, 624, 672
Bst6I	CTCTTC	3 cut(s)	68, 77, 444
BstACI	GRCGYC	2 cut(s)	276, 764
BstAUI	TGTACA	1 cut(s)	717
BstC8I	GCNNGC	5 cut(s)	262, 274, 283, 555, 889
BstDEI	CTNAG	2 cut(s)	90, 432
BstDSI	CCRYGG	2 cut(s)	165, 366
BstF5I	GGATG	1 cut(s)	176
BstH2I	RGCGCY	2 cut(s)	279, 894
BstHHI	GCGC	2 cut(s)	278, 893
BstKTI	GATC	5 cut(s)	89, 705, 726, 744, 870
BstMAI	GTCTC	1 cut(s)	365
BstMBI	GATC	5 cut(s)	86, 702, 723, 741, 867
BstMWI	GCNNNNNNNGC	4 cut(s)	278, 282, 689, 897
BstNI	CCWGG	1 cut(s)	328
BstNSI	RCATGY	1 cut(s)	796
BstSCI	CCNGG	4 cut(s)	115, 132, 326, 661
BstSFI	CTRYAG	1 cut(s)	76
BstV1I	GCAGC	1 cut(s)	544
BstV2I	GAAGAC	3 cut(s)	223, 346, 514
BstX2I	RGATCY	1 cut(s)	86
BstYI	RGATCY	1 cut(s)	86
Bsu36I	CCTNAGG	1 cut(s)	432
BsuRI	GGCC	7 cut(s)	180, 334, 392, 629, 692, 752, 876
BtgI	CCRYGG	2 cut(s)	165, 366
BtgZI	GCGATG	2 cut(s)	454, 826
BtsCI	GGATG	1 cut(s)	176
BtsI	GCAGTG	1 cut(s)	321
BtsIMutI	CAGTG	1 cut(s)	321
BveI	ACCTGC	1 cut(s)	905
Cac8I	GCNNGC	5 cut(s)	262, 274, 283, 555, 889
CciI	TCATGA	1 cut(s)	423
CfoI	GCGC	2 cut(s)	278, 893
Cfr10I	RCCGGY	2 cut(s)	98, 272
Cfr13I	GGNCC	1 cut(s)	583
CseI	GACGC	1 cut(s)	753
Csp6I	GTAC	3 cut(s)	217, 718, 916
CviAII	CATG	6 cut(s)	208, 367, 424, 460, 793, 826
CviQI	GTAC	3 cut(s)	217, 718, 916
DdeI	CTNAG	2 cut(s)	90, 432
DinI	GGCGCC	1 cut(s)	277
DpnI	GATC	5 cut(s)	88, 704, 725, 743, 869
DpnII	GATC	5 cut(s)	86, 702, 723, 741, 867
DriI	GACNNNNNGTC	1 cut(s)	784
EaeI	YGGCCR	1 cut(s)	750
Eam1104I	CTCTTC	3 cut(s)	68, 77, 444
Eam1105I	GACNNNNNGTC	1 cut(s)	784
EarI	CTCTTC	3 cut(s)	68, 77, 444
EciI	GGCGGA	1 cut(s)	367
Ecl136II	GAGCTC	1 cut(s)	928
Eco130I	CCWWGG	2 cut(s)	366, 919
Eco147I	AGGCCT	1 cut(s)	692
Eco24I	GRGCYC	1 cut(s)	930
Eco47I	GGWCC	1 cut(s)	583
Eco53kI	GAGCTC	1 cut(s)	928
Eco81I	CCTNAGG	1 cut(s)	432
Eco88I	CYCGRG	1 cut(s)	185
EcoICRI	GAGCTC	1 cut(s)	928
EcoO109I	RGGNCCY	1 cut(s)	583
EcoRII	CCWGG	1 cut(s)	326
EcoT14I	CCWWGG	2 cut(s)	366, 919
EcoT38I	GRGCYC	1 cut(s)	930
EgeI	GGCGCC	1 cut(s)	277
EheI	GGCGCC	1 cut(s)	277
ErhI	CCWWGG	2 cut(s)	366, 919
FaeI	CATG	6 cut(s)	211, 370, 427, 463, 796, 829
FalI	AAGNNNNNCTT	2 cut(s)	731, 763
FaqI	GGGAC	1 cut(s)	772
FatI	CATG	6 cut(s)	207, 366, 423, 459, 792, 825
FblI	GTMKAC	2 cut(s)	597, 951
Fnu4HI	GCNGC	2 cut(s)	279, 558
FokI	GGATG	1 cut(s)	183
FriOI	GRGCYC	1 cut(s)	930
Fsp4HI	GCNGC	2 cut(s)	279, 558
FspBI	CTAG	2 cut(s)	161, 336
GlaI	GCGC	2 cut(s)	277, 892
GluI	GCNGC	2 cut(s)	279, 558
GsaI	CCCAGC	1 cut(s)	499
HaeII	RGCGCY	2 cut(s)	279, 894
HaeIII	GGCC	7 cut(s)	180, 334, 392, 629, 692, 752, 876
HapII	CCGG	6 cut(s)	99, 116, 134, 273, 633, 663
HgaI	GACGC	1 cut(s)	753
HhaI	GCGC	2 cut(s)	278, 893
Hin1I	GRCGYC	2 cut(s)	276, 764
Hin1II	CATG	6 cut(s)	211, 370, 427, 463, 796, 829
Hin6I	GCGC	2 cut(s)	276, 891
HinP1I	GCGC	2 cut(s)	276, 891
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HinfI	GANTC	3 cut(s)	456, 636, 853
HpaII	CCGG	6 cut(s)	99, 116, 134, 273, 633, 663
HphI	GGTGA	5 cut(s)	13, 43, 88, 148, 759
Hpy166II	GTNNAC	4 cut(s)	96, 346, 598, 952
Hpy188I	TCNGA	4 cut(s)	226, 455, 860, 872
Hpy188III	TCNNGA	5 cut(s)	235, 424, 633, 643, 799
Hpy8I	GTNNAC	4 cut(s)	96, 346, 598, 952
Hpy99I	CGWCG	1 cut(s)	812
HpyAV	CCTTC	8 cut(s)	55, 115, 250, 369, 502, 625, 809, 823
HpyCH4III	ACNGT	3 cut(s)	567, 624, 672
HpyCH4IV	ACGT	1 cut(s)	594
HpyCH4V	TGCA	5 cut(s)	264, 285, 560, 900, 947
HpyF10VI	GCNNNNNNNGC	4 cut(s)	278, 282, 689, 897
HpyF3I	CTNAG	2 cut(s)	90, 432
HpySE526I	ACGT	1 cut(s)	594
Hsp92I	GRCGYC	2 cut(s)	276, 764
Hsp92II	CATG	6 cut(s)	211, 370, 427, 463, 796, 829
HspAI	GCGC	2 cut(s)	276, 891
KasI	GGCGCC	1 cut(s)	275
Kpn2I	TCCGGA	1 cut(s)	632
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Kzo9I	GATC	5 cut(s)	86, 702, 723, 741, 867
LguI	GCTCTTC	1 cut(s)	444
LmnI	GCTCC	5 cut(s)	4, 344, 417, 712, 933
Lsp1109I	GCAGC	1 cut(s)	544
LweI	GCATC	4 cut(s)	273, 399, 636, 934
MaeI	CTAG	2 cut(s)	161, 336
MaeII	ACGT	1 cut(s)	594
MaeIII	GTNAC	3 cut(s)	49, 319, 765
MalI	GATC	5 cut(s)	88, 704, 725, 743, 869
MboI	GATC	5 cut(s)	86, 702, 723, 741, 867
MfeI	CAATTG	1 cut(s)	651
MflI	RGATCY	1 cut(s)	86
MhlI	GDGCHC	1 cut(s)	930
MluCI	AATT	4 cut(s)	191, 602, 651, 961
Mly113I	GGCGCC	1 cut(s)	276
MmeI	TCCRAC	3 cut(s)	327, 643, 720
MroI	TCCGGA	1 cut(s)	632
MroNI	GCCGGC	1 cut(s)	272
MseI	TTAA	1 cut(s)	9
MslI	CAYNNNNRTG	2 cut(s)	644, 939
MspI	CCGG	6 cut(s)	99, 116, 134, 273, 633, 663
MspR9I	CCNGG	4 cut(s)	117, 134, 328, 663
MunI	CAATTG	1 cut(s)	651
MvaI	CCWGG	1 cut(s)	328
MwoI	GCNNNNNNNGC	4 cut(s)	278, 282, 689, 897
NaeI	GCCGGC	1 cut(s)	274
NarI	GGCGCC	1 cut(s)	276
NciI	CCSGG	3 cut(s)	117, 134, 663
NcoI	CCATGG	1 cut(s)	366
NdeII	GATC	5 cut(s)	86, 702, 723, 741, 867
NgoMIV	GCCGGC	1 cut(s)	272
NlaIII	CATG	6 cut(s)	211, 370, 427, 463, 796, 829
NlaIV	GGNNCC	3 cut(s)	277, 585, 820
NmeAIII	GCCGAG	1 cut(s)	778
NmuCI	GTSAC	3 cut(s)	49, 319, 765
NspI	RCATGY	1 cut(s)	796
PagI	TCATGA	1 cut(s)	423
PaqCI	CACCTGC	1 cut(s)	905
PceI	AGGCCT	1 cut(s)	692
PciSI	GCTCTTC	1 cut(s)	444
PcsI	WCGNNNNNNNCGW	2 cut(s)	750, 876
PdiI	GCCGGC	1 cut(s)	274
PfeI	GAWTC	3 cut(s)	456, 636, 853
PflMI	CCANNNNNTGG	2 cut(s)	171, 625
PkrI	GCNGC	2 cut(s)	280, 559
PluTI	GGCGCC	1 cut(s)	279
PpuMI	RGGWCCY	1 cut(s)	583
Psp124BI	GAGCTC	1 cut(s)	930
Psp5II	RGGWCCY	1 cut(s)	583
Psp6I	CCWGG	1 cut(s)	326
PspFI	CCCAGC	1 cut(s)	495
PspGI	CCWGG	1 cut(s)	326
PspN4I	GGNNCC	3 cut(s)	277, 585, 820
PspPI	GGNCC	1 cut(s)	583
PspPPI	RGGWCCY	1 cut(s)	583
PsuI	RGATCY	1 cut(s)	86
RsaI	GTAC	3 cut(s)	218, 719, 917
RsaNI	GTAC	3 cut(s)	217, 718, 916
RseI	CAYNNNNRTG	2 cut(s)	644, 939
SacI	GAGCTC	1 cut(s)	930
SapI	GCTCTTC	1 cut(s)	444
SaqAI	TTAA	1 cut(s)	9
SatI	GCNGC	2 cut(s)	279, 558
Sau3AI	GATC	5 cut(s)	86, 702, 723, 741, 867
Sau96I	GGNCC	1 cut(s)	583
ScaI	AGTACT	1 cut(s)	218
ScrFI	CCNGG	4 cut(s)	117, 134, 328, 663
SduI	GDGCHC	1 cut(s)	930
SfaNI	GCATC	4 cut(s)	273, 399, 636, 934
SfcI	CTRYAG	1 cut(s)	76
SfoI	GGCGCC	1 cut(s)	277
SinI	GGWCC	1 cut(s)	583
SmiMI	CAYNNNNRTG	2 cut(s)	644, 939
SmlI	CTYRAG	1 cut(s)	578
SmoI	CTYRAG	1 cut(s)	578
Sse9I	AATT	4 cut(s)	191, 602, 651, 961
SseBI	AGGCCT	1 cut(s)	692
SsiI	CCGC	3 cut(s)	205, 279, 378
SspDI	GGCGCC	1 cut(s)	275
SspMI	CTAG	2 cut(s)	161, 336
SstI	GAGCTC	1 cut(s)	930
StuI	AGGCCT	1 cut(s)	692
StyD4I	CCNGG	4 cut(s)	115, 132, 326, 661
StyI	CCWWGG	2 cut(s)	366, 919
TaaI	ACNGT	3 cut(s)	567, 624, 672
TaiI	ACGT	1 cut(s)	597
TaqI	TCGA	3 cut(s)	516, 644, 744
TasI	AATT	4 cut(s)	191, 602, 651, 961
TatI	WGTACW	2 cut(s)	216, 717
TauI	GCSGC	1 cut(s)	281
TfiI	GAWTC	3 cut(s)	456, 636, 853
Tru1I	TTAA	1 cut(s)	9
Tru9I	TTAA	1 cut(s)	9
TscAI	CASTG	1 cut(s)	328
TseFI	GTSAC	3 cut(s)	49, 319, 765
TseI	GCWGC	1 cut(s)	557
Tsp45I	GTSAC	3 cut(s)	49, 319, 765
TspDTI	ATGAA	5 cut(s)	184, 412, 440, 842, 895
TspGWI	ACGGA	1 cut(s)	331
TspRI	CASTG	1 cut(s)	328
Van91I	CCANNNNNTGG	2 cut(s)	171, 625
VpaK11BI	GGWCC	1 cut(s)	583
XapI	RAATTY	2 cut(s)	191, 602
XceI	RCATGY	1 cut(s)	796
XmiI	GTMKAC	2 cut(s)	597, 951
XspI	CTAG	2 cut(s)	161, 336
ZrmI	AGTACT	1 cut(s)	218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.