Rorug03G0298400

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
31008936 .. 31011987
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0298400.1

Sequence Viewer

Length: 963 bp
ATGGCAAGTGCAGAACCCTTAAGTTCGAATACGGCCGCCGTAGAATTGCGCCGTCTGACAGTGTTGTCGGTGCTGAGCGAGTGCGTCCGGATACTCAAAGCAGATTATCTACTGCTGCTATTTCTCTCCCTTATCTTCCTCTTCCCAAAATGTTTTTCCTCCATATCCCACCCGACCCGCCAAAGCCTCCTCAAAGCCGAGCATCCCTTTCCTGATCAATACCAGTCGGAGACTCTACTTGCTCTTGCTTTCTCATTCTTCACCCACATCTTTTCCTTGTGGGGATTTCTCTATTATCTCTTGGGTCTCTGGTCAATCACATACGTCGTATTTCATTGCTTTTATAGCCGTAGCCGTTTCATCAAATGCGGTCCGCTCGATACAATATACGCCATGTTTAAATCTTTGTGTATCTCCTTTTTCCCTCTGCTAGGTGTGATCCTAATCTTTGTTCCCAACATTGTTAGTTTGTTTAATCTGGTTCACTTTGGCCAAATTTTGTTTAAGGGGCTTAGAGGAACTGAGAAAAGTGACATAGATATCTTTTATGTTGTTTTAGTGCTCGGTTGTCTTAATCTCCACTTAGAGTGGAACCTTGCACCATCTATTATTGTAGTAGAATCGGGCGGACTGCTGGAGTCTTTGAGAAGAAGCAGCTTATTAATGAAGGGAAAGAAAATGTTGGCTTTGTCTATATTATTGGTCTATGGTAGTTTTGCCATTATTTTAGGACTCTTTAGTAGTTGGATTCTGGAAGTCCAGTTGAGTTTGAATGATGATCTGAGTCATGGTGGTTGGTGGAAGATGGTGAATTGGGAATTTCTGTTTCGAATTTTACCAGCATCAGTTTTATTCATGCTGGTTTTGTTGTTCAACATGGTGACCAATATCGTTTTCTACGTTTACTGCATCAAGCCAGAAGATAATGAGAAAGAAAAAGTTGTGAATCAGTCTCAACTATGA

Protein Analysis

320

Amino Acids

36.58

Weight (kDa)

8.11

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 64
AccBSI CCGCTC 1 cut(s) 376
AccIII TCCGGA 1 cut(s) 87
AciI CCGC 5 cut(s) 36, 178, 369, 374, 627
AclWI GGATC 1 cut(s) 433
AcoI YGGCCR 2 cut(s) 33, 490
AcsI RAATTY 3 cut(s) 495, 818, 831
AfiI CCNNNNNNNGG 1 cut(s) 431
AflII CTTAAG 1 cut(s) 19
AgsI TTSAA 2 cut(s) 772, 874
AjuI GAANNNNNNNTTGG 4 cut(s) 139, 171, 878, 910
AluBI AGCT 1 cut(s) 657
AluI AGCT 1 cut(s) 657
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 3 cut(s) 224, 311, 957
AlwI GGATC 1 cut(s) 433
Aor13HI TCCGGA 1 cut(s) 87
AoxI GGCC 2 cut(s) 33, 490
ApeKI GCWGC 2 cut(s) 115, 654
ApoI RAATTY 3 cut(s) 495, 818, 831
AseI ATTAAT 1 cut(s) 662
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 1 cut(s) 371
AsuHPI GGTGA 3 cut(s) 253, 820, 892
AsuII TTCGAA 2 cut(s) 26, 829
AvaII GGWCC 1 cut(s) 371
BalI TGGCCA 1 cut(s) 492
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 2 cut(s) 102, 666
BccI CCATC 2 cut(s) 610, 799
BceAI ACGGC 5 cut(s) 23, 36, 48, 333, 339
BciVI GTATCC 1 cut(s) 84
BclI TGATCA 1 cut(s) 214
BcoDI GTCTC 3 cut(s) 224, 311, 957
BfaI CTAG 1 cut(s) 431
BfrI CTTAAG 1 cut(s) 19
BfuI GTATCC 1 cut(s) 84
BisI GCNGC 3 cut(s) 36, 116, 655
BlpI GCTNAGC 1 cut(s) 74
BlsI GCNGC 3 cut(s) 37, 117, 656
Bme18I GGWCC 1 cut(s) 371
BmgT120I GGNCC 1 cut(s) 371
BmiI GGNNCC 1 cut(s) 593
BmsI GCATC 3 cut(s) 211, 851, 918
BpmI CTGGAG 1 cut(s) 656
Bpu1102I GCTNAGC 1 cut(s) 74
Bpu14I TTCGAA 2 cut(s) 26, 829
BsaBI GATNNNNATC 1 cut(s) 443
BsaI GGTCTC 1 cut(s) 311
BsaWI WCCGGW 1 cut(s) 87
Bsc4I CCNNNNNNNGG 1 cut(s) 431
Bse1I ACTGG 2 cut(s) 223, 760
Bse3DI GCAATG 1 cut(s) 334
Bse8I GATNNNNATC 1 cut(s) 443
BseAI TCCGGA 1 cut(s) 87
BseGI GGATG 1 cut(s) 202
BseJI GATNNNNATC 1 cut(s) 443
BseLI CCNNNNNNNGG 1 cut(s) 431
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 3 cut(s) 65, 513, 773
BseNI ACTGG 2 cut(s) 223, 760
BseRI GAGGAG 1 cut(s) 179
BseX3I CGGCCG 1 cut(s) 33
BseXI GCAGC 2 cut(s) 102, 666
BsgI GTGCAG 1 cut(s) 30
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 2 cut(s) 35, 492
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 564
BsiSI CCGG 1 cut(s) 88
BslI CCNNNNNNNGG 1 cut(s) 431
BsmAI GTCTC 3 cut(s) 224, 311, 957
BsnI GGCC 2 cut(s) 35, 492
Bso31I GGTCTC 1 cut(s) 311
Bsp119I TTCGAA 2 cut(s) 26, 829
Bsp1286I GDGCHC 1 cut(s) 564
Bsp13I TCCGGA 1 cut(s) 87
Bsp143I GATC 3 cut(s) 214, 438, 778
Bsp1720I GCTNAGC 1 cut(s) 74
BspACI CCGC 5 cut(s) 36, 178, 369, 374, 627
BspANI GGCC 2 cut(s) 35, 492
BspCNI CTCAG 3 cut(s) 66, 514, 774
BspEI TCCGGA 1 cut(s) 87
BspLI GGNNCC 1 cut(s) 593
BspPI GGATC 1 cut(s) 433
BspT104I TTCGAA 2 cut(s) 26, 829
BspTI CTTAAG 1 cut(s) 19
BspTNI GGTCTC 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 376
BsrDI GCAATG 1 cut(s) 334
BsrI ACTGG 2 cut(s) 223, 760
BssMI GATC 3 cut(s) 214, 438, 778
Bst4CI ACNGT 1 cut(s) 61
Bst6I CTCTTC 1 cut(s) 146
BstAFI CTTAAG 1 cut(s) 19
BstBI TTCGAA 2 cut(s) 26, 829
BstDEI CTNAG 5 cut(s) 74, 512, 522, 583, 782
BstEII GGTNACC 1 cut(s) 880
BstENI CCTNNNNNAGG 1 cut(s) 429
BstF5I GGATG 1 cut(s) 202
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 3 cut(s) 217, 441, 781
BstMAI GTCTC 3 cut(s) 224, 311, 957
BstMBI GATC 3 cut(s) 214, 438, 778
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 1 cut(s) 345
BstPI GGTNACC 1 cut(s) 880
BstV1I GCAGC 2 cut(s) 102, 666
BstZI CGGCCG 1 cut(s) 33
BsuI GTATCC 1 cut(s) 84
BsuRI GGCC 2 cut(s) 35, 492
BtsCI GGATG 1 cut(s) 202
BtsIMutI CAGTG 1 cut(s) 66
CfoI GCGC 1 cut(s) 51
Cfr13I GGNCC 1 cut(s) 371
CpoI CGGWCCG 1 cut(s) 371
CseI GACGC 1 cut(s) 73
CspI CGGWCCG 1 cut(s) 371
CviAII CATG 4 cut(s) 394, 788, 856, 877
DdeI CTNAG 5 cut(s) 74, 512, 522, 583, 782
DpnI GATC 3 cut(s) 216, 440, 780
DpnII GATC 3 cut(s) 214, 438, 778
DraI TTTAAA 1 cut(s) 400
DrdI GACNNNNNNGTC 1 cut(s) 64
DseDI GACNNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 2 cut(s) 33, 490
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
EciI GGCGGA 1 cut(s) 642
EclXI CGGCCG 1 cut(s) 33
Eco31I GGTCTC 1 cut(s) 311
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 1 cut(s) 371
Eco52I CGGCCG 1 cut(s) 33
Eco91I GGTNACC 1 cut(s) 880
EcoNI CCTNNNNNAGG 1 cut(s) 429
EcoO65I GGTNACC 1 cut(s) 880
EcoRV GATATC 1 cut(s) 541
FaeI CATG 4 cut(s) 397, 791, 859, 880
FatI CATG 4 cut(s) 393, 787, 855, 876
FauI CCCGC 1 cut(s) 185
FbaI TGATCA 1 cut(s) 214
Fnu4HI GCNGC 3 cut(s) 36, 116, 655
FokI GGATG 1 cut(s) 189
Fsp4HI GCNGC 3 cut(s) 36, 116, 655
FspBI CTAG 1 cut(s) 431
GlaI GCGC 1 cut(s) 50
GluI GCNGC 3 cut(s) 36, 116, 655
GsuI CTGGAG 1 cut(s) 656
HaeIII GGCC 2 cut(s) 35, 492
HapII CCGG 1 cut(s) 88
HgaI GACGC 1 cut(s) 73
HhaI GCGC 1 cut(s) 51
Hin1II CATG 4 cut(s) 397, 791, 859, 880
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HinfI GANTC 7 cut(s) 232, 620, 638, 732, 748, 784, 946
HpaII CCGG 1 cut(s) 88
HphI GGTGA 3 cut(s) 253, 820, 892
Hpy166II GTNNAC 2 cut(s) 484, 904
Hpy188I TCNGA 3 cut(s) 57, 229, 783
Hpy188III TCNNGA 3 cut(s) 88, 212, 752
Hpy8I GTNNAC 2 cut(s) 484, 904
Hpy99I CGWCG 1 cut(s) 329
HpyAV CCTTC 1 cut(s) 661
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4IV ACGT 2 cut(s) 324, 900
HpyCH4V TGCA 3 cut(s) 11, 599, 909
HpyF10VI GCNNNNNNNGC 1 cut(s) 345
HpyF3I CTNAG 5 cut(s) 74, 512, 522, 583, 782
HpySE526I ACGT 2 cut(s) 324, 900
Hsp92II CATG 4 cut(s) 397, 791, 859, 880
HspAI GCGC 1 cut(s) 49
Kpn2I TCCGGA 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 214
Kzo9I GATC 3 cut(s) 214, 438, 778
Lsp1109I GCAGC 2 cut(s) 102, 666
LweI GCATC 3 cut(s) 211, 851, 918
MaeI CTAG 1 cut(s) 431
MaeII ACGT 2 cut(s) 324, 900
MaeIII GTNAC 2 cut(s) 530, 880
MalI GATC 3 cut(s) 216, 440, 780
MbiI CCGCTC 1 cut(s) 376
MboI GATC 3 cut(s) 214, 438, 778
MboII GAAGA 6 cut(s) 127, 133, 250, 660, 814, 932
MhlI GDGCHC 1 cut(s) 564
MlsI TGGCCA 1 cut(s) 492
MluCI AATT 5 cut(s) 44, 495, 811, 818, 831
MluNI TGGCCA 1 cut(s) 492
MlyI GAGTC 4 cut(s) 226, 647, 726, 793
MmeI TCCRAC 2 cut(s) 207, 725
MnlI CCTC 6 cut(s) 149, 169, 197, 200, 435, 509
Mox20I TGGCCA 1 cut(s) 492
MroI TCCGGA 1 cut(s) 87
MscI TGGCCA 1 cut(s) 492
MseI TTAA 6 cut(s) 20, 399, 474, 504, 573, 662
Msp20I TGGCCA 1 cut(s) 492
MspCI CTTAAG 1 cut(s) 19
MspI CCGG 1 cut(s) 88
MwoI GCNNNNNNNGC 1 cut(s) 345
NdeII GATC 3 cut(s) 214, 438, 778
NlaIII CATG 4 cut(s) 397, 791, 859, 880
NlaIV GGNNCC 1 cut(s) 593
NmeAIII GCCGAG 1 cut(s) 223
NmuCI GTSAC 2 cut(s) 530, 880
NspV TTCGAA 2 cut(s) 26, 829
PcsI WCGNNNNNNNCGW 1 cut(s) 897
PfeI GAWTC 3 cut(s) 620, 748, 946
PkrI GCNGC 3 cut(s) 37, 117, 656
PleI GAGTC 4 cut(s) 226, 646, 726, 792
PpsI GAGTC 4 cut(s) 226, 646, 726, 792
PshBI ATTAAT 1 cut(s) 662
PspEI GGTNACC 1 cut(s) 880
PspN4I GGNNCC 1 cut(s) 593
PspPI GGNCC 1 cut(s) 371
Rsr2I CGGWCCG 1 cut(s) 371
RsrII CGGWCCG 1 cut(s) 371
SaqAI TTAA 6 cut(s) 20, 399, 474, 504, 573, 662
SatI GCNGC 3 cut(s) 36, 116, 655
Sau3AI GATC 3 cut(s) 214, 438, 778
Sau96I GGNCC 1 cut(s) 371
SchI GAGTC 4 cut(s) 226, 647, 726, 793
SduI GDGCHC 1 cut(s) 564
SetI ASST 5 cut(s) 327, 436, 597, 659, 903
SfaNI GCATC 3 cut(s) 211, 851, 918
SfuI TTCGAA 2 cut(s) 26, 829
SinI GGWCC 1 cut(s) 371
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
Sse9I AATT 5 cut(s) 44, 495, 811, 818, 831
SsiI CCGC 5 cut(s) 36, 178, 369, 374, 627
SspMI CTAG 1 cut(s) 431
TaaI ACNGT 1 cut(s) 61
TaiI ACGT 2 cut(s) 327, 903
TaqI TCGA 3 cut(s) 26, 378, 829
TasI AATT 5 cut(s) 44, 495, 811, 818, 831
TauI GCSGC 1 cut(s) 38
TfiI GAWTC 3 cut(s) 620, 748, 946
Tru1I TTAA 6 cut(s) 20, 399, 474, 504, 573, 662
Tru9I TTAA 6 cut(s) 20, 399, 474, 504, 573, 662
TscAI CASTG 1 cut(s) 66
TseFI GTSAC 2 cut(s) 530, 880
TseI GCWGC 2 cut(s) 115, 654
Tsp45I GTSAC 2 cut(s) 530, 880
TspDTI ATGAA 4 cut(s) 323, 349, 680, 844
TspRI CASTG 1 cut(s) 66
Vha464I CTTAAG 1 cut(s) 19
VpaK11BI GGWCC 1 cut(s) 371
VspI ATTAAT 1 cut(s) 662
XagI CCTNNNNNAGG 1 cut(s) 429
XapI RAATTY 3 cut(s) 495, 818, 831
XspI CTAG 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.