RLG00000004584

FIST_C

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
60484574 .. 60487503
2930 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004584

Sequence Viewer

Length: 1503 bp
ATGCCCAACGAAGGAGTTGTCTCTGCTGTCTTCTCTAAGGTGAACGACGACATTTTGCTGAACATTCTGAGGAGACTGCCGGCGGTGGCGTTTGCATGTGCGGCGTGCGTTAGCAGAGCGTGGAACAGAAACTGCCGTAGCATTCTCTGCCGCCCCAAGTTCGTTTCAGCTATGTCTGTGAACCCAGACCCCTGTGAGGCTGTGGATGAGGTGTTTGATGAGATTTTCTCTCAGCCGATTCGTCCCGACTTTGCAATTGTTTACATTGGCATGGAGTTTAGCTTGCCATTCACAAGCCTCTTGGTCTTCAAAAAGGTACCGCGTGGAGTTCCAATCATCATCAGTCAAGCTGTTGGGCTAATAGGCGTCGATGCTGGAGCAGATGAAATCGTAGAGGTGAAGTGGGAATTGGAAAATGGGCCCAACTATTGGGATGAAGAAATTCTAATGGGTGGTAATCCAATAAATGGAGGGTTAATTCTCTCTGTTGGATTTGTGCCCGATTTAAAAGTGGATGTCATCCCACTTCCAAGATTAAAGACTCAACCCAATATGCCATTGATGGAGTACTTTATGCTGGAGCTCAGGAGTTACACTGCCTCCGTTTCAGGTTCTCTCGAGCCAGCTTGTATCACCATGTTCGGAGATCATCGTGTTGATATAAGACCCATTGTTGAGAAACTAGATATTGTCATGCCTGAGGAGACTGCCGTTGTAGGAGACGCAAAAGGCTCCTTTCTGTTCCGCCGCAGGGACCAAACCCAAAATTACAGTGCTGATCTGTTCTTCTTTGATGCTGCTGCTCTAGTATTTGCCAGGGACCAAAAAAAGTCTGCTGAGTTAGGGGAAACTCGGTTCCATGTGGCGGTGGCCGACGGCATAATTCCATTTGGTCCTGAGCTCAGGAGCGTTTCAGTGTTTGAGGATTTCTTTGCTCAATCTTGGATTTCGGGCGTAGTGGAAGGAGCAGAAGAAGGGTATCCCATGCTTGATTGCGTCACTGTTTTACAACAGCTTATAAATCAGTTGGACTTGGGAAACCCAAATTTATACATTGCGGTCAGGAAAGGAAGACAATACTCCACACAATTCAGAACGACCCTGGCTTGTCATGAACTTTTGGGGGGTAACTACGAGTCCATAATCGTCAAGGGTTGTGGCATACAACCTGGGGATAGATTCATATTCCTCCACTCAGACGCCGGAAGTGCACTGACTCGTGTTGACGATGCTCGCCACAGTTTGGAAGCATTGGATGCTAATCAAGAGGTGTTTGGAGGCTTTATTTTCTCCAGCTACCTCCGCGACAGGTCCTTTTTCGGAGCCTCTCATGTGGATATAACTCCCTTTACTGACAAGCTCAGTGGAGTCCCCATGGCTGGTATCTCCTGCACAAGAGAAATTGGGCGTGGGGCGTTACTTGGTCCAGGACTAGGGTATTGCCTCCATGCACATAGCTGTGTGTACCTAGCTATGTCTTATGTTCCTCCTATGTCCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

501

Amino Acids

55.03

Weight (kDa)

4.94

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
Acc65I GGTACC 1 cut(s) 316
AccB1I GGYRCC 1 cut(s) 316
AccB7I CCANNNNNTGG 3 cut(s) 429, 467, 1243
AccII CGCG 2 cut(s) 322, 1305
AciI CCGC 9 cut(s) 83, 101, 151, 320, 745, 748, 866, 1058, 1303
AcoI YGGCCR 1 cut(s) 870
AcsI RAATTY 2 cut(s) 441, 1045
AcyI GRCGYC 2 cut(s) 366, 1200
AfaI GTAC 3 cut(s) 318, 569, 1466
AfiI CCNNNNNNNGG 9 cut(s) 11, 196, 429, 467, 751, 865, 1243, 1379, 1433
AgsI TTSAA 1 cut(s) 310
AjnI CCWGG 4 cut(s) 815, 1101, 1168, 1426
AjuI GAANNNNNNNTTGG 2 cut(s) 392, 424
AloI GAACNNNNNNTCC 2 cut(s) 839, 871
Alw21I GWGCWC 3 cut(s) 585, 903, 1213
Alw26I GTCTC 4 cut(s) 25, 67, 698, 714
Alw44I GTGCAC 1 cut(s) 1209
AlwNI CAGNNNCTG 1 cut(s) 132
Ama87I CYCGRG 1 cut(s) 617
AoxI GGCC 2 cut(s) 419, 870
ApaI GGGCCC 1 cut(s) 423
ApaLI GTGCAC 1 cut(s) 1209
ApeKI GCWGC 2 cut(s) 797, 800
ApoI RAATTY 2 cut(s) 441, 1045
ArsI GACNNNNNNTTYG 1 cut(s) 35
Asp700I GAANNNNTTC 1 cut(s) 441
Asp718I GGTACC 1 cut(s) 316
AspS9I GGNCC 7 cut(s) 419, 420, 754, 820, 893, 1311, 1424
AsuHPI GGTGA 3 cut(s) 52, 409, 625
AvaI CYCGRG 1 cut(s) 617
AvaII GGWCC 5 cut(s) 754, 820, 893, 1311, 1424
AxyI CCTNAGG 1 cut(s) 699
BaeGI GKGCMC 3 cut(s) 423, 501, 1213
BanI GGYRCC 1 cut(s) 316
BanII GRGCYC 3 cut(s) 423, 585, 903
BauI CACGAG 1 cut(s) 1218
BbsI GAAGAC 3 cut(s) 22, 298, 1078
Bbv12I GWGCWC 3 cut(s) 585, 903, 1213
BbvI GCAGC 2 cut(s) 784, 787
BccI CCATC 1 cut(s) 556
BceAI ACGGC 3 cut(s) 120, 695, 892
BciT130I CCWGG 4 cut(s) 817, 1103, 1170, 1428
BciVI GTATCC 1 cut(s) 990
BcoDI GTCTC 4 cut(s) 25, 67, 698, 714
BfaI CTAG 4 cut(s) 683, 806, 1433, 1469
BfuI GTATCC 1 cut(s) 990
BisI GCNGC 5 cut(s) 102, 151, 748, 798, 801
BlsI GCNGC 5 cut(s) 103, 152, 749, 799, 802
BmcAI AGTACT 1 cut(s) 569
Bme1390I CCNGG 4 cut(s) 817, 1103, 1170, 1428
Bme18I GGWCC 5 cut(s) 754, 820, 893, 1311, 1424
BmeT110I CYCGRG 1 cut(s) 617
BmgT120I GGNCC 7 cut(s) 419, 420, 754, 820, 893, 1311, 1424
BmiI GGNNCC 7 cut(s) 318, 421, 733, 755, 821, 857, 1324
BmrFI CCNGG 4 cut(s) 817, 1103, 1170, 1428
BmsI GCATC 4 cut(s) 361, 784, 1219, 1246
BpiI GAAGAC 3 cut(s) 22, 298, 1078
BplI GAGNNNNNCTC 2 cut(s) 212, 244
BpmI CTGGAG 3 cut(s) 396, 599, 1276
Bpu10I CCTNAGC 3 cut(s) 584, 897, 902
BsaBI GATNNNNATC 1 cut(s) 1260
BsaHI GRCGYC 2 cut(s) 366, 1200
BsaJI CCNNGG 4 cut(s) 816, 1101, 1169, 1374
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bsc4I CCNNNNNNNGG 9 cut(s) 11, 196, 429, 467, 751, 865, 1243, 1379, 1433
Bse118I RCCGGY 1 cut(s) 79
Bse21I CCTNAGG 1 cut(s) 699
Bse3DI GCAATG 1 cut(s) 1053
Bse8I GATNNNNATC 1 cut(s) 1260
BseBI CCWGG 4 cut(s) 817, 1103, 1170, 1428
BseDI CCNNGG 4 cut(s) 816, 1101, 1169, 1374
BseGI GGATG 5 cut(s) 211, 439, 519, 520, 1261
BseJI GATNNNNATC 1 cut(s) 1260
BseLI CCNNNNNNNGG 9 cut(s) 11, 196, 429, 467, 751, 865, 1243, 1379, 1433
BseMI GCAATG 1 cut(s) 1053
BseMII CTCAG 9 cut(s) 59, 245, 598, 690, 828, 888, 916, 1209, 1375
BseRI GAGGAG 2 cut(s) 85, 716
BseSI GKGCMC 3 cut(s) 423, 501, 1213
BseXI GCAGC 2 cut(s) 784, 787
BsgI GTGCAG 1 cut(s) 1375
Bsh1236I CGCG 2 cut(s) 322, 1305
BshFI GGCC 2 cut(s) 421, 872
BshNI GGYRCC 1 cut(s) 316
BsiHKAI GWGCWC 3 cut(s) 585, 903, 1213
BsiHKCI CYCGRG 1 cut(s) 617
BsiSI CCGG 2 cut(s) 80, 1203
BslFI GGGAC 4 cut(s) 228, 767, 833, 1355
BslI CCNNNNNNNGG 9 cut(s) 11, 196, 429, 467, 751, 865, 1243, 1379, 1433
BsmAI GTCTC 4 cut(s) 25, 67, 698, 714
BsmBI CGTCTC 1 cut(s) 714
BsmFI GGGAC 4 cut(s) 228, 767, 833, 1355
BsmI GAATGC 1 cut(s) 141
BsnI GGCC 2 cut(s) 421, 872
BsoBI CYCGRG 1 cut(s) 617
Bsp120I GGGCCC 1 cut(s) 419
Bsp1286I GDGCHC 5 cut(s) 423, 501, 585, 903, 1213
Bsp143I GATC 2 cut(s) 646, 778
Bsp19I CCATGG 1 cut(s) 1374
BspACI CCGC 9 cut(s) 83, 101, 151, 320, 745, 748, 866, 1058, 1303
BspANI GGCC 2 cut(s) 421, 872
BspCNI CTCAG 9 cut(s) 60, 244, 597, 691, 829, 889, 915, 1208, 1374
BspFNI CGCG 2 cut(s) 322, 1305
BspHI TCATGA 1 cut(s) 1111
BspLI GGNNCC 7 cut(s) 318, 421, 733, 755, 821, 857, 1324
BspT107I GGYRCC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 1053
BsrFI RCCGGY 1 cut(s) 79
BssAI RCCGGY 1 cut(s) 79
BssECI CCNNGG 4 cut(s) 816, 1101, 1169, 1374
BssMI GATC 2 cut(s) 646, 778
BssNI GRCGYC 2 cut(s) 366, 1200
BssSI CACGAG 1 cut(s) 1218
BssT1I CCWWGG 1 cut(s) 1374
Bst2BI CACGAG 1 cut(s) 1218
Bst2UI CCWGG 4 cut(s) 817, 1103, 1170, 1428
Bst4CI ACNGT 3 cut(s) 773, 1003, 1241
BstACI GRCGYC 2 cut(s) 366, 1200
BstAPI GCANNNNNTGC 2 cut(s) 147, 1256
BstC8I GCNNGC 5 cut(s) 81, 106, 284, 624, 1234
BstDSI CCRYGG 1 cut(s) 1374
BstF5I GGATG 5 cut(s) 211, 439, 519, 520, 1261
BstFNI CGCG 2 cut(s) 322, 1305
BstKTI GATC 2 cut(s) 649, 781
BstMAI GTCTC 4 cut(s) 25, 67, 698, 714
BstMBI GATC 2 cut(s) 646, 778
BstMWI GCNNNNNNNGC 5 cut(s) 101, 147, 1208, 1256, 1302
BstNI CCWGG 4 cut(s) 817, 1103, 1170, 1428
BstNSI RCATGY 1 cut(s) 99
BstSCI CCNGG 4 cut(s) 815, 1101, 1168, 1426
BstSLI GKGCMC 3 cut(s) 423, 501, 1213
BstUI CGCG 2 cut(s) 322, 1305
BstV1I GCAGC 2 cut(s) 784, 787
BstV2I GAAGAC 3 cut(s) 22, 298, 1078
Bsu36I CCTNAGG 1 cut(s) 699
BsuI GTATCC 1 cut(s) 990
BsuRI GGCC 2 cut(s) 421, 872
BtgI CCRYGG 1 cut(s) 1374
BtsCI GGATG 5 cut(s) 211, 439, 519, 520, 1261
BtsI GCAGTG 1 cut(s) 594
BtsIMutI CAGTG 6 cut(s) 594, 778, 921, 999, 1211, 1369
Cac8I GCNNGC 5 cut(s) 81, 106, 284, 624, 1234
CaiI CAGNNNCTG 1 cut(s) 132
CciI TCATGA 1 cut(s) 1111
Cfr10I RCCGGY 1 cut(s) 79
Cfr13I GGNCC 7 cut(s) 419, 420, 754, 820, 893, 1311, 1424
CseI GACGC 4 cut(s) 355, 731, 985, 1208
Csp6I GTAC 3 cut(s) 317, 568, 1465
CspCI CAANNNNNGTGG 4 cut(s) 1138, 1173, 1345, 1380
CviQI GTAC 3 cut(s) 317, 568, 1465
DpnI GATC 2 cut(s) 648, 780
DpnII GATC 2 cut(s) 646, 778
DraI TTTAAA 1 cut(s) 507
EaeI YGGCCR 1 cut(s) 870
EciI GGCGGA 1 cut(s) 734
Ecl136II GAGCTC 2 cut(s) 583, 901
Eco130I CCWWGG 1 cut(s) 1374
Eco24I GRGCYC 3 cut(s) 423, 585, 903
Eco47I GGWCC 5 cut(s) 754, 820, 893, 1311, 1424
Eco53kI GAGCTC 2 cut(s) 583, 901
Eco81I CCTNAGG 1 cut(s) 699
Eco88I CYCGRG 1 cut(s) 617
EcoICRI GAGCTC 2 cut(s) 583, 901
EcoO109I RGGNCCY 1 cut(s) 1311
EcoRII CCWGG 4 cut(s) 815, 1101, 1168, 1426
EcoT14I CCWWGG 1 cut(s) 1374
EcoT38I GRGCYC 3 cut(s) 423, 585, 903
ErhI CCWWGG 1 cut(s) 1374
Esp3I CGTCTC 1 cut(s) 714
FaqI GGGAC 4 cut(s) 228, 767, 833, 1355
Fnu4HI GCNGC 5 cut(s) 102, 151, 748, 798, 801
FokI GGATG 5 cut(s) 218, 446, 506, 527, 1268
FriOI GRGCYC 3 cut(s) 423, 585, 903
Fsp4HI GCNGC 5 cut(s) 102, 151, 748, 798, 801
FspBI CTAG 4 cut(s) 683, 806, 1433, 1469
GluI GCNGC 5 cut(s) 102, 151, 748, 798, 801
GsuI CTGGAG 3 cut(s) 396, 599, 1276
HaeIII GGCC 2 cut(s) 421, 872
HapII CCGG 2 cut(s) 80, 1203
HgaI GACGC 4 cut(s) 355, 731, 985, 1208
Hin1I GRCGYC 2 cut(s) 366, 1200
HincII GTYRAC 1 cut(s) 1225
HindII GTYRAC 1 cut(s) 1225
HinfI GANTC 6 cut(s) 238, 541, 1136, 1179, 1216, 1368
HpaII CCGG 2 cut(s) 80, 1203
HphI GGTGA 3 cut(s) 52, 409, 625
Hpy166II GTNNAC 6 cut(s) 43, 181, 262, 1211, 1225, 1465
Hpy188I TCNGA 5 cut(s) 69, 644, 1094, 1198, 1322
Hpy188III TCNNGA 8 cut(s) 245, 586, 617, 896, 904, 1063, 1112, 1265
Hpy8I GTNNAC 6 cut(s) 43, 181, 262, 1211, 1225, 1465
Hpy99I CGWCG 3 cut(s) 50, 371, 878
HpyAV CCTTC 3 cut(s) 5, 956, 968
HpyCH4III ACNGT 3 cut(s) 773, 1003, 1241
HpyCH4V TGCA 5 cut(s) 95, 254, 1211, 1392, 1451
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 147, 1208, 1256, 1302
Hsp92I GRCGYC 2 cut(s) 366, 1200
KpnI GGTACC 1 cut(s) 320
KroI GCCGGC 1 cut(s) 79
KroNI GCCGGC 1 cut(s) 81
Kzo9I GATC 2 cut(s) 646, 778
LmnI GCTCC 6 cut(s) 377, 580, 737, 906, 965, 1322
Lsp1109I GCAGC 2 cut(s) 784, 787
LweI GCATC 4 cut(s) 361, 784, 1219, 1246
MaeI CTAG 4 cut(s) 683, 806, 1433, 1469
MaeIII GTNAC 4 cut(s) 590, 997, 1127, 1416
MalI GATC 2 cut(s) 648, 780
MboI GATC 2 cut(s) 646, 778
MboII GAAGA 6 cut(s) 22, 298, 449, 778, 983, 1083
MfeI CAATTG 1 cut(s) 255
MhlI GDGCHC 5 cut(s) 423, 501, 585, 903, 1213
MluCI AATT 9 cut(s) 255, 407, 441, 477, 766, 882, 1045, 1088, 1401
MlyI GAGTC 4 cut(s) 535, 1145, 1210, 1377
MmeI TCCRAC 2 cut(s) 469, 1008
MroNI GCCGGC 1 cut(s) 79
MroXI GAANNNNTTC 1 cut(s) 441
MseI TTAA 3 cut(s) 476, 506, 536
MslI CAYNNNNRTG 2 cut(s) 269, 1458
MspI CCGG 2 cut(s) 80, 1203
MspR9I CCNGG 4 cut(s) 817, 1103, 1170, 1428
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 1 cut(s) 141
MvaI CCWGG 4 cut(s) 817, 1103, 1170, 1428
MvnI CGCG 2 cut(s) 322, 1305
MwoI GCNNNNNNNGC 5 cut(s) 101, 147, 1208, 1256, 1302
NaeI GCCGGC 1 cut(s) 81
NcoI CCATGG 1 cut(s) 1374
NdeII GATC 2 cut(s) 646, 778
NgoMIV GCCGGC 1 cut(s) 79
NlaIV GGNNCC 7 cut(s) 318, 421, 733, 755, 821, 857, 1324
NmuCI GTSAC 1 cut(s) 997
NspI RCATGY 1 cut(s) 99
PaeR7I CTCGAG 1 cut(s) 617
PagI TCATGA 1 cut(s) 1111
PctI GAATGC 1 cut(s) 141
PdiI GCCGGC 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 2 cut(s) 238, 1179
PflMI CCANNNNNTGG 3 cut(s) 429, 467, 1243
PfoI TCCNGGA 1 cut(s) 1426
PkrI GCNGC 5 cut(s) 103, 152, 749, 799, 802
PleI GAGTC 4 cut(s) 535, 1144, 1210, 1376
PpsI GAGTC 4 cut(s) 535, 1144, 1210, 1376
PpuMI RGGWCCY 1 cut(s) 1311
PsiI TTATAA 1 cut(s) 1019
Psp124BI GAGCTC 2 cut(s) 585, 903
Psp5II RGGWCCY 1 cut(s) 1311
Psp6I CCWGG 4 cut(s) 815, 1101, 1168, 1426
PspGI CCWGG 4 cut(s) 815, 1101, 1168, 1426
PspN4I GGNNCC 7 cut(s) 318, 421, 733, 755, 821, 857, 1324
PspOMI GGGCCC 1 cut(s) 419
PspPI GGNCC 7 cut(s) 419, 420, 754, 820, 893, 1311, 1424
PspPPI RGGWCCY 1 cut(s) 1311
PstNI CAGNNNCTG 1 cut(s) 132
RsaI GTAC 3 cut(s) 318, 569, 1466
RsaNI GTAC 3 cut(s) 317, 568, 1465
RseI CAYNNNNRTG 2 cut(s) 269, 1458
SacI GAGCTC 2 cut(s) 585, 903
SaqAI TTAA 3 cut(s) 476, 506, 536
SatI GCNGC 5 cut(s) 102, 151, 748, 798, 801
Sau3AI GATC 2 cut(s) 646, 778
Sau96I GGNCC 7 cut(s) 419, 420, 754, 820, 893, 1311, 1424
ScaI AGTACT 1 cut(s) 569
SchI GAGTC 4 cut(s) 535, 1145, 1210, 1377
ScrFI CCNGG 4 cut(s) 817, 1103, 1170, 1428
SduI GDGCHC 5 cut(s) 423, 501, 585, 903, 1213
SfaNI GCATC 4 cut(s) 361, 784, 1219, 1246
Sfr274I CTCGAG 1 cut(s) 617
SinI GGWCC 5 cut(s) 754, 820, 893, 1311, 1424
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 2 cut(s) 269, 1458
SmlI CTYRAG 1 cut(s) 617
SmoI CTYRAG 1 cut(s) 617
Sse9I AATT 9 cut(s) 255, 407, 441, 477, 766, 882, 1045, 1088, 1401
SsiI CCGC 9 cut(s) 83, 101, 151, 320, 745, 748, 866, 1058, 1303
SspMI CTAG 4 cut(s) 683, 806, 1433, 1469
SstI GAGCTC 2 cut(s) 585, 903
StyD4I CCNGG 4 cut(s) 815, 1101, 1168, 1426
StyI CCWWGG 1 cut(s) 1374
TaaI ACNGT 3 cut(s) 773, 1003, 1241
TaqI TCGA 2 cut(s) 369, 618
TasI AATT 9 cut(s) 255, 407, 441, 477, 766, 882, 1045, 1088, 1401
TatI WGTACW 1 cut(s) 567
TauI GCSGC 3 cut(s) 104, 153, 750
TfiI GAWTC 2 cut(s) 238, 1179
Tru1I TTAA 3 cut(s) 476, 506, 536
Tru9I TTAA 3 cut(s) 476, 506, 536
TscAI CASTG 6 cut(s) 601, 778, 921, 1006, 1218, 1369
TseFI GTSAC 1 cut(s) 997
TseI GCWGC 2 cut(s) 797, 800
Tsp45I GTSAC 1 cut(s) 997
TspDTI ATGAA 4 cut(s) 399, 450, 1128, 1171
TspGWI ACGGA 1 cut(s) 592
TspRI CASTG 6 cut(s) 601, 778, 921, 1006, 1218, 1369
Van91I CCANNNNNTGG 3 cut(s) 429, 467, 1243
VneI GTGCAC 1 cut(s) 1209
VpaK11BI GGWCC 5 cut(s) 754, 820, 893, 1311, 1424
XapI RAATTY 2 cut(s) 441, 1045
XceI RCATGY 1 cut(s) 99
XhoI CTCGAG 1 cut(s) 617
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 4 cut(s) 683, 806, 1433, 1469
ZrmI AGTACT 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.