FIST_C
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g08570 |
| malus_domestica | MD00G1199400.v1.1 MD05G1336900.v1.1 MD06G1139000.v1.1 MD06G1139500.v1.1 MD14G1155100.v1.1 |
| prunus_persica | Prupe.5G149100_v2.0.a1 |
| pyrus_communis | pycom14g12890 |
| rosa_laevigata | RLG00000004584 |
| rosa_roxburghii | Rroxscaffold_3G00265110 Rroxscaffold_3G00265120 |
| rosa_rugosa | Rorug06G0500100 Rorug06G0500200 Rorug06G0500200 Rorug06G0500300 |
| rosa_samantha | Rh7AG105400 Rh7BG108200 Rh7CG110200 Rh7DG108400 Rh7DG108500 |
| rosa_wichuraiana | Rw7G009130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1019 |
| Acc65I | GGTACC | 1 cut(s) | 316 |
| AccB1I | GGYRCC | 1 cut(s) | 316 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 429, 467, 1243 |
| AccII | CGCG | 2 cut(s) | 322, 1305 |
| AciI | CCGC | 9 cut(s) | 83, 101, 151, 320, 745, 748, 866, 1058, 1303 |
| AcoI | YGGCCR | 1 cut(s) | 870 |
| AcsI | RAATTY | 2 cut(s) | 441, 1045 |
| AcyI | GRCGYC | 2 cut(s) | 366, 1200 |
| AfaI | GTAC | 3 cut(s) | 318, 569, 1466 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 11, 196, 429, 467, 751, 865, 1243, 1379, 1433 |
| AgsI | TTSAA | 1 cut(s) | 310 |
| AjnI | CCWGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 392, 424 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 839, 871 |
| Alw21I | GWGCWC | 3 cut(s) | 585, 903, 1213 |
| Alw26I | GTCTC | 4 cut(s) | 25, 67, 698, 714 |
| Alw44I | GTGCAC | 1 cut(s) | 1209 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 132 |
| Ama87I | CYCGRG | 1 cut(s) | 617 |
| AoxI | GGCC | 2 cut(s) | 419, 870 |
| ApaI | GGGCCC | 1 cut(s) | 423 |
| ApaLI | GTGCAC | 1 cut(s) | 1209 |
| ApeKI | GCWGC | 2 cut(s) | 797, 800 |
| ApoI | RAATTY | 2 cut(s) | 441, 1045 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 35 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 441 |
| Asp718I | GGTACC | 1 cut(s) | 316 |
| AspS9I | GGNCC | 7 cut(s) | 419, 420, 754, 820, 893, 1311, 1424 |
| AsuHPI | GGTGA | 3 cut(s) | 52, 409, 625 |
| AvaI | CYCGRG | 1 cut(s) | 617 |
| AvaII | GGWCC | 5 cut(s) | 754, 820, 893, 1311, 1424 |
| AxyI | CCTNAGG | 1 cut(s) | 699 |
| BaeGI | GKGCMC | 3 cut(s) | 423, 501, 1213 |
| BanI | GGYRCC | 1 cut(s) | 316 |
| BanII | GRGCYC | 3 cut(s) | 423, 585, 903 |
| BauI | CACGAG | 1 cut(s) | 1218 |
| BbsI | GAAGAC | 3 cut(s) | 22, 298, 1078 |
| Bbv12I | GWGCWC | 3 cut(s) | 585, 903, 1213 |
| BbvI | GCAGC | 2 cut(s) | 784, 787 |
| BccI | CCATC | 1 cut(s) | 556 |
| BceAI | ACGGC | 3 cut(s) | 120, 695, 892 |
| BciT130I | CCWGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| BciVI | GTATCC | 1 cut(s) | 990 |
| BcoDI | GTCTC | 4 cut(s) | 25, 67, 698, 714 |
| BfaI | CTAG | 4 cut(s) | 683, 806, 1433, 1469 |
| BfuI | GTATCC | 1 cut(s) | 990 |
| BisI | GCNGC | 5 cut(s) | 102, 151, 748, 798, 801 |
| BlsI | GCNGC | 5 cut(s) | 103, 152, 749, 799, 802 |
| BmcAI | AGTACT | 1 cut(s) | 569 |
| Bme1390I | CCNGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| Bme18I | GGWCC | 5 cut(s) | 754, 820, 893, 1311, 1424 |
| BmeT110I | CYCGRG | 1 cut(s) | 617 |
| BmgT120I | GGNCC | 7 cut(s) | 419, 420, 754, 820, 893, 1311, 1424 |
| BmiI | GGNNCC | 7 cut(s) | 318, 421, 733, 755, 821, 857, 1324 |
| BmrFI | CCNGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| BmsI | GCATC | 4 cut(s) | 361, 784, 1219, 1246 |
| BpiI | GAAGAC | 3 cut(s) | 22, 298, 1078 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 212, 244 |
| BpmI | CTGGAG | 3 cut(s) | 396, 599, 1276 |
| Bpu10I | CCTNAGC | 3 cut(s) | 584, 897, 902 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1260 |
| BsaHI | GRCGYC | 2 cut(s) | 366, 1200 |
| BsaJI | CCNNGG | 4 cut(s) | 816, 1101, 1169, 1374 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 584, 614 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 11, 196, 429, 467, 751, 865, 1243, 1379, 1433 |
| Bse118I | RCCGGY | 1 cut(s) | 79 |
| Bse21I | CCTNAGG | 1 cut(s) | 699 |
| Bse3DI | GCAATG | 1 cut(s) | 1053 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1260 |
| BseBI | CCWGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| BseDI | CCNNGG | 4 cut(s) | 816, 1101, 1169, 1374 |
| BseGI | GGATG | 5 cut(s) | 211, 439, 519, 520, 1261 |
| BseJI | GATNNNNATC | 1 cut(s) | 1260 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 11, 196, 429, 467, 751, 865, 1243, 1379, 1433 |
| BseMI | GCAATG | 1 cut(s) | 1053 |
| BseMII | CTCAG | 9 cut(s) | 59, 245, 598, 690, 828, 888, 916, 1209, 1375 |
| BseRI | GAGGAG | 2 cut(s) | 85, 716 |
| BseSI | GKGCMC | 3 cut(s) | 423, 501, 1213 |
| BseXI | GCAGC | 2 cut(s) | 784, 787 |
| BsgI | GTGCAG | 1 cut(s) | 1375 |
| Bsh1236I | CGCG | 2 cut(s) | 322, 1305 |
| BshFI | GGCC | 2 cut(s) | 421, 872 |
| BshNI | GGYRCC | 1 cut(s) | 316 |
| BsiHKAI | GWGCWC | 3 cut(s) | 585, 903, 1213 |
| BsiHKCI | CYCGRG | 1 cut(s) | 617 |
| BsiSI | CCGG | 2 cut(s) | 80, 1203 |
| BslFI | GGGAC | 4 cut(s) | 228, 767, 833, 1355 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 11, 196, 429, 467, 751, 865, 1243, 1379, 1433 |
| BsmAI | GTCTC | 4 cut(s) | 25, 67, 698, 714 |
| BsmBI | CGTCTC | 1 cut(s) | 714 |
| BsmFI | GGGAC | 4 cut(s) | 228, 767, 833, 1355 |
| BsmI | GAATGC | 1 cut(s) | 141 |
| BsnI | GGCC | 2 cut(s) | 421, 872 |
| BsoBI | CYCGRG | 1 cut(s) | 617 |
| Bsp120I | GGGCCC | 1 cut(s) | 419 |
| Bsp1286I | GDGCHC | 5 cut(s) | 423, 501, 585, 903, 1213 |
| Bsp143I | GATC | 2 cut(s) | 646, 778 |
| Bsp19I | CCATGG | 1 cut(s) | 1374 |
| BspACI | CCGC | 9 cut(s) | 83, 101, 151, 320, 745, 748, 866, 1058, 1303 |
| BspANI | GGCC | 2 cut(s) | 421, 872 |
| BspCNI | CTCAG | 9 cut(s) | 60, 244, 597, 691, 829, 889, 915, 1208, 1374 |
| BspFNI | CGCG | 2 cut(s) | 322, 1305 |
| BspHI | TCATGA | 1 cut(s) | 1111 |
| BspLI | GGNNCC | 7 cut(s) | 318, 421, 733, 755, 821, 857, 1324 |
| BspT107I | GGYRCC | 1 cut(s) | 316 |
| BsrDI | GCAATG | 1 cut(s) | 1053 |
| BsrFI | RCCGGY | 1 cut(s) | 79 |
| BssAI | RCCGGY | 1 cut(s) | 79 |
| BssECI | CCNNGG | 4 cut(s) | 816, 1101, 1169, 1374 |
| BssMI | GATC | 2 cut(s) | 646, 778 |
| BssNI | GRCGYC | 2 cut(s) | 366, 1200 |
| BssSI | CACGAG | 1 cut(s) | 1218 |
| BssT1I | CCWWGG | 1 cut(s) | 1374 |
| Bst2BI | CACGAG | 1 cut(s) | 1218 |
| Bst2UI | CCWGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| Bst4CI | ACNGT | 3 cut(s) | 773, 1003, 1241 |
| BstACI | GRCGYC | 2 cut(s) | 366, 1200 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 147, 1256 |
| BstC8I | GCNNGC | 5 cut(s) | 81, 106, 284, 624, 1234 |
| BstDSI | CCRYGG | 1 cut(s) | 1374 |
| BstF5I | GGATG | 5 cut(s) | 211, 439, 519, 520, 1261 |
| BstFNI | CGCG | 2 cut(s) | 322, 1305 |
| BstKTI | GATC | 2 cut(s) | 649, 781 |
| BstMAI | GTCTC | 4 cut(s) | 25, 67, 698, 714 |
| BstMBI | GATC | 2 cut(s) | 646, 778 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 101, 147, 1208, 1256, 1302 |
| BstNI | CCWGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| BstNSI | RCATGY | 1 cut(s) | 99 |
| BstSCI | CCNGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| BstSLI | GKGCMC | 3 cut(s) | 423, 501, 1213 |
| BstUI | CGCG | 2 cut(s) | 322, 1305 |
| BstV1I | GCAGC | 2 cut(s) | 784, 787 |
| BstV2I | GAAGAC | 3 cut(s) | 22, 298, 1078 |
| Bsu36I | CCTNAGG | 1 cut(s) | 699 |
| BsuI | GTATCC | 1 cut(s) | 990 |
| BsuRI | GGCC | 2 cut(s) | 421, 872 |
| BtgI | CCRYGG | 1 cut(s) | 1374 |
| BtsCI | GGATG | 5 cut(s) | 211, 439, 519, 520, 1261 |
| BtsI | GCAGTG | 1 cut(s) | 594 |
| BtsIMutI | CAGTG | 6 cut(s) | 594, 778, 921, 999, 1211, 1369 |
| Cac8I | GCNNGC | 5 cut(s) | 81, 106, 284, 624, 1234 |
| CaiI | CAGNNNCTG | 1 cut(s) | 132 |
| CciI | TCATGA | 1 cut(s) | 1111 |
| Cfr10I | RCCGGY | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 7 cut(s) | 419, 420, 754, 820, 893, 1311, 1424 |
| CseI | GACGC | 4 cut(s) | 355, 731, 985, 1208 |
| Csp6I | GTAC | 3 cut(s) | 317, 568, 1465 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1138, 1173, 1345, 1380 |
| CviQI | GTAC | 3 cut(s) | 317, 568, 1465 |
| DpnI | GATC | 2 cut(s) | 648, 780 |
| DpnII | GATC | 2 cut(s) | 646, 778 |
| DraI | TTTAAA | 1 cut(s) | 507 |
| EaeI | YGGCCR | 1 cut(s) | 870 |
| EciI | GGCGGA | 1 cut(s) | 734 |
| Ecl136II | GAGCTC | 2 cut(s) | 583, 901 |
| Eco130I | CCWWGG | 1 cut(s) | 1374 |
| Eco24I | GRGCYC | 3 cut(s) | 423, 585, 903 |
| Eco47I | GGWCC | 5 cut(s) | 754, 820, 893, 1311, 1424 |
| Eco53kI | GAGCTC | 2 cut(s) | 583, 901 |
| Eco81I | CCTNAGG | 1 cut(s) | 699 |
| Eco88I | CYCGRG | 1 cut(s) | 617 |
| EcoICRI | GAGCTC | 2 cut(s) | 583, 901 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1311 |
| EcoRII | CCWGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| EcoT14I | CCWWGG | 1 cut(s) | 1374 |
| EcoT38I | GRGCYC | 3 cut(s) | 423, 585, 903 |
| ErhI | CCWWGG | 1 cut(s) | 1374 |
| Esp3I | CGTCTC | 1 cut(s) | 714 |
| FaqI | GGGAC | 4 cut(s) | 228, 767, 833, 1355 |
| Fnu4HI | GCNGC | 5 cut(s) | 102, 151, 748, 798, 801 |
| FokI | GGATG | 5 cut(s) | 218, 446, 506, 527, 1268 |
| FriOI | GRGCYC | 3 cut(s) | 423, 585, 903 |
| Fsp4HI | GCNGC | 5 cut(s) | 102, 151, 748, 798, 801 |
| FspBI | CTAG | 4 cut(s) | 683, 806, 1433, 1469 |
| GluI | GCNGC | 5 cut(s) | 102, 151, 748, 798, 801 |
| GsuI | CTGGAG | 3 cut(s) | 396, 599, 1276 |
| HaeIII | GGCC | 2 cut(s) | 421, 872 |
| HapII | CCGG | 2 cut(s) | 80, 1203 |
| HgaI | GACGC | 4 cut(s) | 355, 731, 985, 1208 |
| Hin1I | GRCGYC | 2 cut(s) | 366, 1200 |
| HincII | GTYRAC | 1 cut(s) | 1225 |
| HindII | GTYRAC | 1 cut(s) | 1225 |
| HinfI | GANTC | 6 cut(s) | 238, 541, 1136, 1179, 1216, 1368 |
| HpaII | CCGG | 2 cut(s) | 80, 1203 |
| HphI | GGTGA | 3 cut(s) | 52, 409, 625 |
| Hpy166II | GTNNAC | 6 cut(s) | 43, 181, 262, 1211, 1225, 1465 |
| Hpy188I | TCNGA | 5 cut(s) | 69, 644, 1094, 1198, 1322 |
| Hpy188III | TCNNGA | 8 cut(s) | 245, 586, 617, 896, 904, 1063, 1112, 1265 |
| Hpy8I | GTNNAC | 6 cut(s) | 43, 181, 262, 1211, 1225, 1465 |
| Hpy99I | CGWCG | 3 cut(s) | 50, 371, 878 |
| HpyAV | CCTTC | 3 cut(s) | 5, 956, 968 |
| HpyCH4III | ACNGT | 3 cut(s) | 773, 1003, 1241 |
| HpyCH4V | TGCA | 5 cut(s) | 95, 254, 1211, 1392, 1451 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 101, 147, 1208, 1256, 1302 |
| Hsp92I | GRCGYC | 2 cut(s) | 366, 1200 |
| KpnI | GGTACC | 1 cut(s) | 320 |
| KroI | GCCGGC | 1 cut(s) | 79 |
| KroNI | GCCGGC | 1 cut(s) | 81 |
| Kzo9I | GATC | 2 cut(s) | 646, 778 |
| LmnI | GCTCC | 6 cut(s) | 377, 580, 737, 906, 965, 1322 |
| Lsp1109I | GCAGC | 2 cut(s) | 784, 787 |
| LweI | GCATC | 4 cut(s) | 361, 784, 1219, 1246 |
| MaeI | CTAG | 4 cut(s) | 683, 806, 1433, 1469 |
| MaeIII | GTNAC | 4 cut(s) | 590, 997, 1127, 1416 |
| MalI | GATC | 2 cut(s) | 648, 780 |
| MboI | GATC | 2 cut(s) | 646, 778 |
| MboII | GAAGA | 6 cut(s) | 22, 298, 449, 778, 983, 1083 |
| MfeI | CAATTG | 1 cut(s) | 255 |
| MhlI | GDGCHC | 5 cut(s) | 423, 501, 585, 903, 1213 |
| MluCI | AATT | 9 cut(s) | 255, 407, 441, 477, 766, 882, 1045, 1088, 1401 |
| MlyI | GAGTC | 4 cut(s) | 535, 1145, 1210, 1377 |
| MmeI | TCCRAC | 2 cut(s) | 469, 1008 |
| MroNI | GCCGGC | 1 cut(s) | 79 |
| MroXI | GAANNNNTTC | 1 cut(s) | 441 |
| MseI | TTAA | 3 cut(s) | 476, 506, 536 |
| MslI | CAYNNNNRTG | 2 cut(s) | 269, 1458 |
| MspI | CCGG | 2 cut(s) | 80, 1203 |
| MspR9I | CCNGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| MunI | CAATTG | 1 cut(s) | 255 |
| Mva1269I | GAATGC | 1 cut(s) | 141 |
| MvaI | CCWGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| MvnI | CGCG | 2 cut(s) | 322, 1305 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 101, 147, 1208, 1256, 1302 |
| NaeI | GCCGGC | 1 cut(s) | 81 |
| NcoI | CCATGG | 1 cut(s) | 1374 |
| NdeII | GATC | 2 cut(s) | 646, 778 |
| NgoMIV | GCCGGC | 1 cut(s) | 79 |
| NlaIV | GGNNCC | 7 cut(s) | 318, 421, 733, 755, 821, 857, 1324 |
| NmuCI | GTSAC | 1 cut(s) | 997 |
| NspI | RCATGY | 1 cut(s) | 99 |
| PaeR7I | CTCGAG | 1 cut(s) | 617 |
| PagI | TCATGA | 1 cut(s) | 1111 |
| PctI | GAATGC | 1 cut(s) | 141 |
| PdiI | GCCGGC | 1 cut(s) | 81 |
| PdmI | GAANNNNTTC | 1 cut(s) | 441 |
| PfeI | GAWTC | 2 cut(s) | 238, 1179 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 429, 467, 1243 |
| PfoI | TCCNGGA | 1 cut(s) | 1426 |
| PkrI | GCNGC | 5 cut(s) | 103, 152, 749, 799, 802 |
| PleI | GAGTC | 4 cut(s) | 535, 1144, 1210, 1376 |
| PpsI | GAGTC | 4 cut(s) | 535, 1144, 1210, 1376 |
| PpuMI | RGGWCCY | 1 cut(s) | 1311 |
| PsiI | TTATAA | 1 cut(s) | 1019 |
| Psp124BI | GAGCTC | 2 cut(s) | 585, 903 |
| Psp5II | RGGWCCY | 1 cut(s) | 1311 |
| Psp6I | CCWGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| PspGI | CCWGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| PspN4I | GGNNCC | 7 cut(s) | 318, 421, 733, 755, 821, 857, 1324 |
| PspOMI | GGGCCC | 1 cut(s) | 419 |
| PspPI | GGNCC | 7 cut(s) | 419, 420, 754, 820, 893, 1311, 1424 |
| PspPPI | RGGWCCY | 1 cut(s) | 1311 |
| PstNI | CAGNNNCTG | 1 cut(s) | 132 |
| RsaI | GTAC | 3 cut(s) | 318, 569, 1466 |
| RsaNI | GTAC | 3 cut(s) | 317, 568, 1465 |
| RseI | CAYNNNNRTG | 2 cut(s) | 269, 1458 |
| SacI | GAGCTC | 2 cut(s) | 585, 903 |
| SaqAI | TTAA | 3 cut(s) | 476, 506, 536 |
| SatI | GCNGC | 5 cut(s) | 102, 151, 748, 798, 801 |
| Sau3AI | GATC | 2 cut(s) | 646, 778 |
| Sau96I | GGNCC | 7 cut(s) | 419, 420, 754, 820, 893, 1311, 1424 |
| ScaI | AGTACT | 1 cut(s) | 569 |
| SchI | GAGTC | 4 cut(s) | 535, 1145, 1210, 1377 |
| ScrFI | CCNGG | 4 cut(s) | 817, 1103, 1170, 1428 |
| SduI | GDGCHC | 5 cut(s) | 423, 501, 585, 903, 1213 |
| SfaNI | GCATC | 4 cut(s) | 361, 784, 1219, 1246 |
| Sfr274I | CTCGAG | 1 cut(s) | 617 |
| SinI | GGWCC | 5 cut(s) | 754, 820, 893, 1311, 1424 |
| SlaI | CTCGAG | 1 cut(s) | 617 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 269, 1458 |
| SmlI | CTYRAG | 1 cut(s) | 617 |
| SmoI | CTYRAG | 1 cut(s) | 617 |
| Sse9I | AATT | 9 cut(s) | 255, 407, 441, 477, 766, 882, 1045, 1088, 1401 |
| SsiI | CCGC | 9 cut(s) | 83, 101, 151, 320, 745, 748, 866, 1058, 1303 |
| SspMI | CTAG | 4 cut(s) | 683, 806, 1433, 1469 |
| SstI | GAGCTC | 2 cut(s) | 585, 903 |
| StyD4I | CCNGG | 4 cut(s) | 815, 1101, 1168, 1426 |
| StyI | CCWWGG | 1 cut(s) | 1374 |
| TaaI | ACNGT | 3 cut(s) | 773, 1003, 1241 |
| TaqI | TCGA | 2 cut(s) | 369, 618 |
| TasI | AATT | 9 cut(s) | 255, 407, 441, 477, 766, 882, 1045, 1088, 1401 |
| TatI | WGTACW | 1 cut(s) | 567 |
| TauI | GCSGC | 3 cut(s) | 104, 153, 750 |
| TfiI | GAWTC | 2 cut(s) | 238, 1179 |
| Tru1I | TTAA | 3 cut(s) | 476, 506, 536 |
| Tru9I | TTAA | 3 cut(s) | 476, 506, 536 |
| TscAI | CASTG | 6 cut(s) | 601, 778, 921, 1006, 1218, 1369 |
| TseFI | GTSAC | 1 cut(s) | 997 |
| TseI | GCWGC | 2 cut(s) | 797, 800 |
| Tsp45I | GTSAC | 1 cut(s) | 997 |
| TspDTI | ATGAA | 4 cut(s) | 399, 450, 1128, 1171 |
| TspGWI | ACGGA | 1 cut(s) | 592 |
| TspRI | CASTG | 6 cut(s) | 601, 778, 921, 1006, 1218, 1369 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 429, 467, 1243 |
| VneI | GTGCAC | 1 cut(s) | 1209 |
| VpaK11BI | GGWCC | 5 cut(s) | 754, 820, 893, 1311, 1424 |
| XapI | RAATTY | 2 cut(s) | 441, 1045 |
| XceI | RCATGY | 1 cut(s) | 99 |
| XhoI | CTCGAG | 1 cut(s) | 617 |
| XmnI | GAANNNNTTC | 1 cut(s) | 441 |
| XspI | CTAG | 4 cut(s) | 683, 806, 1433, 1469 |
| ZrmI | AGTACT | 1 cut(s) | 569 |