Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004265

Physical Location & Seq

Genomic Coordinates Forward (+)

9615218 .. 9623450

Gene Structure 8233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGGTTGGCGGAATCTTGGATCCCTTTTTTCTTATTTCCGCAATCTCTTTCACTTCCAGCGGGTACAGGGTGATCAACTGGGCACGTACACCATCAAGTCTCATGGAGCCGCGGTTGCCAAGAACCACAAGCATGACTGGCTCATACTCGTGCTTCTTGGTGTCATCGAGATAGTCTTGTATATCATTCAACCTTTCCACCGTTTTGTGGGGAAGGATATGATGACTGACCTCAAGTACCCCATGAAAGCAAACACTGTCCCTGTTTGGGCTGTTCCTGTGTATGCAGTCTTGGTTCCTATTGCCGTTTTTCTCTTCTTCTATGCGCGTAGGAAAGATGTGTATGATCTTCACCACAGTATTCTTGGCCTGTTATTTGCTGTGTTGGTTACTGCTGTCATTACTGATTCAATAAAAAATGGAGTTGGGCGTCCAAGACCAGATTTCTTTTGGCGTTGCTTTCCTGATGGAATCGATAATTATGATAAGTGGGGAGATGTGGTGTGCCATGGTAAGGCCAAGGACATAAAGGAAGGACATAAGAGTTTCCCGAGTGGCCATGCTTCATGGTCCTTTGCAGGCTTAGGCTTCCTTGCCTTGTACTTGAGTGGAAAGATTAAAGTCTTTGATCGAAAAGGGCATGTTGCGAAACTATGCATTGTCTCCCTTCCTCTACTGGTTGCATCTCTTGTTGCAGTGTCCAGAGTATCTGACTATTGGCACCATTGGCAAGATGTGTTTGCTGGAGGTCTTCTAGGATTTGTTGTGGCTGCATTTTGCTACCGGCAGTTCTTCCCTGCCCCTTATCATGATCAAGGATGGGGTCCTTATGCATATTTCCAAGCATTGGAGGAGACGCGTAGCAATTCAAGCTCGGCGTCCACTGCAAATGCACTCAGTGTGCAGGTCATGGGGGTTCAGAACGTTACTCAACCTGTTCCTGCACAAAATGGTGTTGCATTTTCATCACTTGCTTCAAATCAATATACAAGCCTTAAGCTAGATGAAATGGAATCTGGGAGGAGCTCTCGATCGTTCATTTCATCACAGACTCTCGCTCAATTGCTAAGGAAATTTACATTCAAAAATGCCGGAGATTCAGTTGGGTTCTCACACCATCTTGGTCTGAACTTGATTGAGCCTTTTCACCGCTTTGTTGGAGAGGATATGATGACAGACCTGAAATACCCATTGAAAGGCAATACAGTTCCCTTCTGGGGTGTTCCGATAATTGCAATACTGTTACCGCTTGCCATCATTGTTGTCTACTACTTCATCAGAAGGGATGTCTATGATCTGCACCATGCCATTTTAGGCCTTCTGTTTTCTGTCTTTATAACCGCTGTTTTAACTGATGCAATCAAAGATGGTGTTGGACGACCTCGTCCAGACTTCTTTTGGCGTTGTTTCCCCAATGGAAAAGGGGTGTTTGATCCTGTCACAAAGAATGTCATGTGTACTGGAGAGAAGAGTGTCATTAAGGAAGGACACAAAAGCTTCCCAAGCGGGCATACTTCATGGTCCTTCGCAGGTCTTACTTTCATTGCATGGTACTTGTCAGGGAAAGTGAGGGTGTTTGATCGCAAGGGGCATGTTGCAAAACTCTGTATTGTCTTTTCTCCATTACTTCTTGCAGCACTGGTAGCAGTTTCTCGAGTTGATGACTACTGGCATCACTGGCAAGATGTTTTTGCTGGAGGTCTTCTAGGTGCTTTGCCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01110 map00561 map00564 map01110

Pfam Domains

Protein Families

PAP2

Protein Analysis

575

Amino Acids

64.21

Weight (kDa)

9.33

Isoelectric Point (pI)

32.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP2	PF01569	122 - 265	2.5e-31	PAP2 superfamily
PAP2	PF01569	438 - 572	8e-26	PAP2 superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01180 AT2G01180 AT2G01180 AT2G01180 AT2G01180 AT2G01180 AT2G01180 AT2G01180
fragaria_vesca	FvH4_4g26641
malus_domestica	MD13G1034800.v1.1 MD16G1036500.v1.1
prunus_persica	Prupe.1G317400_v2.0.a1 Prupe.1G317400_v2.0.a1 Prupe.1G317400_v2.0.a1 Prupe.1G317400_v2.0.a1 Prupe.1G317400_v2.0.a1 Prupe.1G317400_v2.0.a1
pyrus_communis	pycom13g03040 pycom16g03160
rosa_chinensis	RchiOBHm_Chr4g0434341
rosa_laevigata	RLG00000006681
rosa_multiflora	Rmu_sc0000459.1_g000028
rosa_roxburghii	Rroxscaffold_5G00375710
rosa_rugosa	Rorug04G0276000 Rorug04G0276100 Rorug04G0276100 Rorug04G0276200
rosa_samantha	Rh4AG331300 Rh4BG339200 Rh4CG354300 Rh4DG334300
rosa_wichuraiana	Rw4G028730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1337
AasI	GACNNNNNNGTC	1 cut(s)	1383
Acc36I	ACCTGC	2 cut(s)	895, 1520
AccB1I	GGYRCC	1 cut(s)	720
AccB7I	CCANNNNNTGG	1 cut(s)	847
AccI	GTMKAC	1 cut(s)	1266
AccII	CGCG	3 cut(s)	113, 328, 859
AciI	CCGC	9 cut(s)	10, 40, 61, 111, 113, 1150, 1247, 1341, 1506
AclI	AACGTT	1 cut(s)	924
AclWI	GGATC	3 cut(s)	15, 28, 1427
AcoI	YGGCCR	1 cut(s)	556
AcsI	RAATTY	1 cut(s)	1073
AcyI	GRCGYC	2 cut(s)	430, 878
AdeI	CACNNNGTG	1 cut(s)	899
AfaI	GTAC	6 cut(s)	66, 89, 239, 602, 1459, 1553
AfiI	CCNNNNNNNGG	6 cut(s)	208, 268, 514, 847, 1196, 1217
AflII	CTTAAG	1 cut(s)	995
AflIII	ACRYGT	1 cut(s)	857
AgsI	TTSAA	6 cut(s)	191, 411, 870, 978, 1084, 1195
AluBI	AGCT	4 cut(s)	873, 1000, 1026, 1497
AluI	AGCT	4 cut(s)	873, 1000, 1026, 1497
Alw21I	GWGCWC	1 cut(s)	1028
Alw26I	GTCTC	3 cut(s)	105, 667, 848
AlwI	GGATC	3 cut(s)	15, 28, 1427
Ama87I	CYCGRG	2 cut(s)	550, 1653
AoxI	GGCC	4 cut(s)	367, 516, 556, 1315
ApeKI	GCWGC	2 cut(s)	770, 1634
ApoI	RAATTY	1 cut(s)	1073
AspLEI	GCGC	1 cut(s)	328
AspS9I	GGNCC	3 cut(s)	570, 824, 1521
AsuHPI	GGTGA	3 cut(s)	83, 344, 1139
AvaI	CYCGRG	2 cut(s)	550, 1653
AvaII	GGWCC	3 cut(s)	570, 824, 1521
BaeGI	GKGCMC	1 cut(s)	86
BalI	TGGCCA	1 cut(s)	558
BamHI	GGATCC	1 cut(s)	20
BanI	GGYRCC	1 cut(s)	720
BanII	GRGCYC	1 cut(s)	1028
BauI	CACGAG	1 cut(s)	149
BbsI	GAAGAC	2 cut(s)	743, 1694
Bbv12I	GWGCWC	1 cut(s)	1028
BbvI	GCAGC	2 cut(s)	757, 1646
BccI	CCATC	6 cut(s)	101, 461, 813, 1125, 1262, 1361
BceAI	ACGGC	1 cut(s)	290
BclI	TGATCA	2 cut(s)	73, 811
BcoDI	GTCTC	3 cut(s)	105, 667, 848
BfaI	CTAG	3 cut(s)	755, 1001, 1706
BfrI	CTTAAG	1 cut(s)	995
BfuAI	ACCTGC	2 cut(s)	895, 1520
BisI	GCNGC	3 cut(s)	111, 771, 1635
BlsI	GCNGC	3 cut(s)	112, 772, 1636
Bme18I	GGWCC	3 cut(s)	570, 824, 1521
BmeT110I	CYCGRG	2 cut(s)	550, 1653
BmgT120I	GGNCC	3 cut(s)	570, 824, 1521
BmiI	GGNNCC	5 cut(s)	22, 109, 297, 722, 825
BmrI	ACTGGG	1 cut(s)	89
BmsI	GCATC	3 cut(s)	692, 1345, 1681
BmuI	ACTGGG	1 cut(s)	89
BpiI	GAAGAC	2 cut(s)	743, 1694
BplI	GAGNNNNNCTC	2 cut(s)	1012, 1044
BpmI	CTGGAG	3 cut(s)	765, 1482, 1716
Bpu10I	CCTNAGC	2 cut(s)	583, 1067
BpuEI	CTTGAG	2 cut(s)	218, 625
Bsa29I	ATCGAT	1 cut(s)	474
BsaAI	YACGTR	1 cut(s)	87
BsaHI	GRCGYC	2 cut(s)	430, 878
BsaJI	CCNNGG	3 cut(s)	111, 508, 519
BsaXI	ACNNNNNCTCC	6 cut(s)	99, 129, 486, 516, 1086, 1116
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 268, 514, 847, 1196, 1217
Bse118I	RCCGGY	1 cut(s)	783
Bse1I	ACTGG	7 cut(s)	84, 143, 681, 1465, 1644, 1673, 1682
Bse3DI	GCAATG	1 cut(s)	1542
BseCI	ATCGAT	1 cut(s)	474
BseDI	CCNNGG	3 cut(s)	111, 508, 519
BseGI	GGATG	2 cut(s)	824, 1291
BseLI	CCNNNNNNNGG	6 cut(s)	208, 268, 514, 847, 1196, 1217
BseMI	GCAATG	1 cut(s)	1542
BseMII	CTCAG	1 cut(s)	910
BseNI	ACTGG	7 cut(s)	84, 143, 681, 1465, 1644, 1673, 1682
BseRI	GAGGAG	2 cut(s)	866, 1036
BseSI	GKGCMC	1 cut(s)	86
BseXI	GCAGC	2 cut(s)	757, 1646
BsgI	GTGCAG	3 cut(s)	923, 927, 1283
Bsh1236I	CGCG	3 cut(s)	113, 328, 859
Bsh1285I	CGRYCG	1 cut(s)	1034
BshFI	GGCC	4 cut(s)	369, 518, 558, 1317
BshNI	GGYRCC	1 cut(s)	720
BshVI	ATCGAT	1 cut(s)	474
BsiEI	CGRYCG	1 cut(s)	1034
BsiHKAI	GWGCWC	1 cut(s)	1028
BsiHKCI	CYCGRG	2 cut(s)	550, 1653
BsiSI	CCGG	2 cut(s)	784, 1092
BslFI	GGGAC	1 cut(s)	245
BslI	CCNNNNNNNGG	6 cut(s)	208, 268, 514, 847, 1196, 1217
BsmAI	GTCTC	3 cut(s)	105, 667, 848
BsmBI	CGTCTC	1 cut(s)	848
BsmFI	GGGAC	1 cut(s)	245
BsnI	GGCC	4 cut(s)	369, 518, 558, 1317
BsoBI	CYCGRG	2 cut(s)	550, 1653
Bsp1286I	GDGCHC	2 cut(s)	86, 1028
Bsp143I	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
Bsp19I	CCATGG	1 cut(s)	508
BspACI	CCGC	9 cut(s)	10, 40, 61, 111, 113, 1150, 1247, 1341, 1506
BspANI	GGCC	4 cut(s)	369, 518, 558, 1317
BspCNI	CTCAG	1 cut(s)	909
BspDI	ATCGAT	1 cut(s)	474
BspFNI	CGCG	3 cut(s)	113, 328, 859
BspHI	TCATGA	1 cut(s)	808
BspLI	GGNNCC	5 cut(s)	22, 109, 297, 722, 825
BspMI	ACCTGC	2 cut(s)	895, 1520
BspPI	GGATC	3 cut(s)	15, 28, 1427
BspT107I	GGYRCC	1 cut(s)	720
BspTI	CTTAAG	1 cut(s)	995
BsrDI	GCAATG	1 cut(s)	1542
BsrFI	RCCGGY	1 cut(s)	783
BsrI	ACTGG	7 cut(s)	84, 143, 681, 1465, 1644, 1673, 1682
BssAI	RCCGGY	1 cut(s)	783
BssECI	CCNNGG	3 cut(s)	111, 508, 519
BssMI	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
BssNI	GRCGYC	2 cut(s)	430, 878
BssSI	CACGAG	1 cut(s)	149
BssT1I	CCWWGG	2 cut(s)	508, 519
Bst2BI	CACGAG	1 cut(s)	149
Bst4CI	ACNGT	5 cut(s)	203, 259, 359, 1207, 1242
Bst6I	CTCTTC	2 cut(s)	320, 1463
BstACI	GRCGYC	2 cut(s)	430, 878
BstAFI	CTTAAG	1 cut(s)	995
BstBAI	YACGTR	1 cut(s)	87
BstC8I	GCNNGC	4 cut(s)	580, 1251, 1508, 1719
BstDEI	CTNAG	4 cut(s)	583, 896, 1067, 1722
BstDSI	CCRYGG	2 cut(s)	111, 508
BstF5I	GGATG	2 cut(s)	824, 1291
BstFNI	CGCG	3 cut(s)	113, 328, 859
BstHHI	GCGC	1 cut(s)	328
BstKTI	GATC	9 cut(s)	23, 76, 349, 631, 814, 1034, 1297, 1435, 1582
BstMAI	GTCTC	3 cut(s)	105, 667, 848
BstMBI	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
BstMCI	CGRYCG	1 cut(s)	1034
BstMWI	GCNNNNNNNGC	9 cut(s)	116, 139, 727, 870, 884, 1503, 1643, 1678, 1718
BstNSI	RCATGY	2 cut(s)	644, 1595
BstSLI	GKGCMC	1 cut(s)	86
BstUI	CGCG	3 cut(s)	113, 328, 859
BstV1I	GCAGC	2 cut(s)	757, 1646
BstV2I	GAAGAC	2 cut(s)	743, 1694
BstX2I	RGATCY	1 cut(s)	20
BstYI	RGATCY	1 cut(s)	20
Bsu15I	ATCGAT	1 cut(s)	474
BsuRI	GGCC	4 cut(s)	369, 518, 558, 1317
BsuTUI	ATCGAT	1 cut(s)	474
BtgI	CCRYGG	2 cut(s)	111, 508
BtsCI	GGATG	2 cut(s)	824, 1291
BtsI	GCAGTG	2 cut(s)	702, 882
BtsIMutI	CAGTG	6 cut(s)	255, 702, 882, 904, 1637, 1675
BveI	ACCTGC	2 cut(s)	895, 1520
Cac8I	GCNNGC	4 cut(s)	580, 1251, 1508, 1719
CciI	TCATGA	1 cut(s)	808
CfoI	GCGC	1 cut(s)	328
Cfr10I	RCCGGY	1 cut(s)	783
Cfr13I	GGNCC	3 cut(s)	570, 824, 1521
Cfr42I	CCGCGG	1 cut(s)	114
ClaI	ATCGAT	1 cut(s)	474
CseI	GACGC	3 cut(s)	419, 865, 867
Csp6I	GTAC	6 cut(s)	65, 88, 238, 601, 1458, 1552
CviQI	GTAC	6 cut(s)	65, 88, 238, 601, 1458, 1552
DdeI	CTNAG	4 cut(s)	583, 896, 1067, 1722
DpnI	GATC	9 cut(s)	22, 75, 348, 630, 813, 1033, 1296, 1434, 1581
DpnII	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
DraIII	CACNNNGTG	1 cut(s)	899
DrdI	GACNNNNNNGTC	1 cut(s)	1383
DseDI	GACNNNNNNGTC	1 cut(s)	1383
EaeI	YGGCCR	1 cut(s)	556
Eam1104I	CTCTTC	2 cut(s)	320, 1463
EarI	CTCTTC	2 cut(s)	320, 1463
EciI	GGCGGA	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	1026
Eco130I	CCWWGG	2 cut(s)	508, 519
Eco147I	AGGCCT	1 cut(s)	1317
Eco24I	GRGCYC	1 cut(s)	1028
Eco47I	GGWCC	3 cut(s)	570, 824, 1521
Eco53kI	GAGCTC	1 cut(s)	1026
Eco88I	CYCGRG	2 cut(s)	550, 1653
EcoICRI	GAGCTC	1 cut(s)	1026
EcoO109I	RGGNCCY	1 cut(s)	824
EcoT14I	CCWWGG	2 cut(s)	508, 519
EcoT22I	ATGCAT	2 cut(s)	659, 835
EcoT38I	GRGCYC	1 cut(s)	1028
ErhI	CCWWGG	2 cut(s)	508, 519
Esp3I	CGTCTC	1 cut(s)	848
FaqI	GGGAC	1 cut(s)	245
FauI	CCCGC	2 cut(s)	54, 1499
FbaI	TGATCA	2 cut(s)	73, 811
FblI	GTMKAC	1 cut(s)	1266
Fnu4HI	GCNGC	3 cut(s)	111, 771, 1635
FokI	GGATG	2 cut(s)	831, 1298
FriOI	GRGCYC	1 cut(s)	1028
Fsp4HI	GCNGC	3 cut(s)	111, 771, 1635
FspBI	CTAG	3 cut(s)	755, 1001, 1706
GlaI	GCGC	1 cut(s)	327
GluI	GCNGC	3 cut(s)	111, 771, 1635
GsuI	CTGGAG	3 cut(s)	765, 1482, 1716
HaeIII	GGCC	4 cut(s)	369, 518, 558, 1317
HapII	CCGG	2 cut(s)	784, 1092
HgaI	GACGC	3 cut(s)	419, 865, 867
HhaI	GCGC	1 cut(s)	328
Hin1I	GRCGYC	2 cut(s)	430, 878
Hin6I	GCGC	1 cut(s)	326
HinP1I	GCGC	1 cut(s)	326
HindIII	AAGCTT	1 cut(s)	1495
HinfI	GANTC	6 cut(s)	13, 407, 471, 1013, 1051, 1097
HpaII	CCGG	2 cut(s)	784, 1092
HphI	GGTGA	3 cut(s)	83, 344, 1139
Hpy166II	GTNNAC	4 cut(s)	90, 882, 1267, 1458
Hpy188I	TCNGA	5 cut(s)	712, 921, 1128, 1227, 1280
Hpy188III	TCNNGA	8 cut(s)	169, 464, 550, 702, 809, 1029, 1388, 1653
Hpy8I	GTNNAC	4 cut(s)	90, 882, 1267, 1458
HpyAV	CCTTC	8 cut(s)	208, 527, 677, 1222, 1275, 1328, 1478, 1534
HpyCH4III	ACNGT	5 cut(s)	203, 259, 359, 1207, 1242
HpyCH4IV	ACGT	2 cut(s)	86, 924
HpyF10VI	GCNNNNNNNGC	9 cut(s)	116, 139, 727, 870, 884, 1503, 1643, 1678, 1718
HpyF3I	CTNAG	4 cut(s)	583, 896, 1067, 1722
HpySE526I	ACGT	2 cut(s)	86, 924
Hsp92I	GRCGYC	2 cut(s)	430, 878
HspAI	GCGC	1 cut(s)	326
Ksp22I	TGATCA	2 cut(s)	73, 811
KspI	CCGCGG	1 cut(s)	114
Kzo9I	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
LmnI	GCTCC	2 cut(s)	107, 1023
Lsp1109I	GCAGC	2 cut(s)	757, 1646
LweI	GCATC	3 cut(s)	692, 1345, 1681
MaeI	CTAG	3 cut(s)	755, 1001, 1706
MaeII	ACGT	2 cut(s)	86, 924
MaeIII	GTNAC	4 cut(s)	388, 925, 1242, 1438
MalI	GATC	9 cut(s)	22, 75, 348, 630, 813, 1033, 1296, 1434, 1581
MboI	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
MboII	GAAGA	7 cut(s)	307, 310, 341, 743, 784, 1480, 1694
MfeI	CAATTG	1 cut(s)	1061
MflI	RGATCY	1 cut(s)	20
MhlI	GDGCHC	2 cut(s)	86, 1028
MlsI	TGGCCA	1 cut(s)	558
MluCI	AATT	5 cut(s)	478, 865, 1061, 1073, 1230
MluI	ACGCGT	1 cut(s)	857
MluNI	TGGCCA	1 cut(s)	558
MlyI	GAGTC	1 cut(s)	1045
MmeI	TCCRAC	2 cut(s)	1138, 1354
MnlI	CCTC	9 cut(s)	242, 681, 740, 844, 1014, 1156, 1392, 1563, 1691
Mox20I	TGGCCA	1 cut(s)	558
Mph1103I	ATGCAT	2 cut(s)	659, 835
MscI	TGGCCA	1 cut(s)	558
MseI	TTAA	4 cut(s)	618, 996, 1349, 1479
MslI	CAYNNNNRTG	2 cut(s)	132, 149
Msp20I	TGGCCA	1 cut(s)	558
MspA1I	CMGCKG	3 cut(s)	61, 113, 1343
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	2 cut(s)	784, 1092
MunI	CAATTG	1 cut(s)	1061
MvnI	CGCG	3 cut(s)	113, 328, 859
MwoI	GCNNNNNNNGC	9 cut(s)	116, 139, 727, 870, 884, 1503, 1643, 1678, 1718
NcoI	CCATGG	1 cut(s)	508
NdeII	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
NlaIV	GGNNCC	5 cut(s)	22, 109, 297, 722, 825
NmeAIII	GCCGAG	1 cut(s)	854
NmuCI	GTSAC	1 cut(s)	1438
NsiI	ATGCAT	2 cut(s)	659, 835
NspI	RCATGY	2 cut(s)	644, 1595
PaeR7I	CTCGAG	1 cut(s)	1653
PagI	TCATGA	1 cut(s)	808
PceI	AGGCCT	1 cut(s)	1317
PfeI	GAWTC	5 cut(s)	13, 407, 471, 1013, 1097
PflFI	GACNNNGTC	1 cut(s)	1383
PflMI	CCANNNNNTGG	1 cut(s)	847
PkrI	GCNGC	3 cut(s)	112, 772, 1636
Ple19I	CGATCG	1 cut(s)	1034
PleI	GAGTC	1 cut(s)	1045
PpsI	GAGTC	1 cut(s)	1045
Ppu21I	YACGTR	1 cut(s)	87
PpuMI	RGGWCCY	1 cut(s)	824
PsiI	TTATAA	1 cut(s)	1337
Psp124BI	GAGCTC	1 cut(s)	1028
Psp1406I	AACGTT	1 cut(s)	924
Psp5II	RGGWCCY	1 cut(s)	824
PspN4I	GGNNCC	5 cut(s)	22, 109, 297, 722, 825
PspPI	GGNCC	3 cut(s)	570, 824, 1521
PspPPI	RGGWCCY	1 cut(s)	824
PsuI	RGATCY	1 cut(s)	20
PsyI	GACNNNGTC	1 cut(s)	1383
PvuI	CGATCG	1 cut(s)	1034
RsaI	GTAC	6 cut(s)	66, 89, 239, 602, 1459, 1553
RsaNI	GTAC	6 cut(s)	65, 88, 238, 601, 1458, 1552
RseI	CAYNNNNRTG	2 cut(s)	132, 149
SacI	GAGCTC	1 cut(s)	1028
SacII	CCGCGG	1 cut(s)	114
SaqAI	TTAA	4 cut(s)	618, 996, 1349, 1479
SatI	GCNGC	3 cut(s)	111, 771, 1635
Sau3AI	GATC	9 cut(s)	20, 73, 346, 628, 811, 1031, 1294, 1432, 1579
Sau96I	GGNCC	3 cut(s)	570, 824, 1521
SchI	GAGTC	1 cut(s)	1045
SduI	GDGCHC	2 cut(s)	86, 1028
SfaNI	GCATC	3 cut(s)	692, 1345, 1681
Sfr274I	CTCGAG	1 cut(s)	1653
Sfr303I	CCGCGG	1 cut(s)	114
SgrBI	CCGCGG	1 cut(s)	114
SinI	GGWCC	3 cut(s)	570, 824, 1521
SlaI	CTCGAG	1 cut(s)	1653
SmiMI	CAYNNNNRTG	2 cut(s)	132, 149
SmlI	CTYRAG	4 cut(s)	233, 604, 995, 1653
SmoI	CTYRAG	4 cut(s)	233, 604, 995, 1653
Sse9I	AATT	5 cut(s)	478, 865, 1061, 1073, 1230
SseBI	AGGCCT	1 cut(s)	1317
SsiI	CCGC	9 cut(s)	10, 40, 61, 111, 113, 1150, 1247, 1341, 1506
SspMI	CTAG	3 cut(s)	755, 1001, 1706
SstI	GAGCTC	1 cut(s)	1028
StuI	AGGCCT	1 cut(s)	1317
StyI	CCWWGG	2 cut(s)	508, 519
TaaI	ACNGT	5 cut(s)	203, 259, 359, 1207, 1242
TaiI	ACGT	2 cut(s)	89, 927
TaqI	TCGA	5 cut(s)	168, 474, 631, 1030, 1654
TasI	AATT	5 cut(s)	478, 865, 1061, 1073, 1230
TatI	WGTACW	2 cut(s)	600, 1457
TauI	GCSGC	1 cut(s)	113
TfiI	GAWTC	5 cut(s)	13, 407, 471, 1013, 1097
Tru1I	TTAA	4 cut(s)	618, 996, 1349, 1479
Tru9I	TTAA	4 cut(s)	618, 996, 1349, 1479
TscAI	CASTG	6 cut(s)	262, 702, 889, 904, 1644, 1682
TseFI	GTSAC	1 cut(s)	1438
TseI	GCWGC	2 cut(s)	770, 1634
Tsp45I	GTSAC	1 cut(s)	1438
TspDTI	ATGAA	9 cut(s)	260, 555, 954, 1020, 1027, 1032, 1264, 1506, 1531
TspRI	CASTG	6 cut(s)	262, 702, 889, 904, 1644, 1682
Tth111I	GACNNNGTC	1 cut(s)	1383
Van91I	CCANNNNNTGG	1 cut(s)	847
Vha464I	CTTAAG	1 cut(s)	995
VpaK11BI	GGWCC	3 cut(s)	570, 824, 1521
XapI	RAATTY	1 cut(s)	1073
XceI	RCATGY	2 cut(s)	644, 1595
XcmI	CCANNNNNNNNNTGG	3 cut(s)	362, 447, 1395
XhoI	CTCGAG	1 cut(s)	1653
XmiI	GTMKAC	1 cut(s)	1266
XspI	CTAG	3 cut(s)	755, 1001, 1706
Zsp2I	ATGCAT	2 cut(s)	659, 835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.