Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005811

Physical Location & Seq

Genomic Coordinates Forward (+)

48727285 .. 48741479

Gene Structure 14195 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009200

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGGGAAGCAATCAAGCCAGAACCCAGGATGGAGAAAACGCAAAATGCCCAACAAGTTCCAGAAAGGTGGGAAAAGTCGTCGGGTGGAAGAAGAAAAGGTTGCGGTGGCTAGCCCCTCATCTACTTCATCAGGGGAACTGCCAGAGGAAGAATCCAATGGTGTGGCTTCCGAAGAAGAAATAGTTTATAAAGAGCCATCAATGTATGACAAATTGTTGATGGCGCTAGGGTCGTCTAGTAAAGCTGTTGCGGCTGCCTATAAGCAGAGAAAAAGACAAGAAGAAGGTAAAAGTGACTCGGACTCAGAAGAGGAGGAGGAGGAGGAGGATAACGATGGCGGAACTGAATCTTCTAGTGACTTGGAAGAAGTAGATGATGGTGAAGAAGGGGGTGACAATGAATTTCCAGTGAAAGGAAAACTGAAAGATCCGGCAAGTGAAGATGCAAAAACTGAGGATGATCAGGACACCTCTGACATGGATGACCGCGAGACCTCTAACTCGGATGACTGCGAGACCTCTGACTCGGATGATCAGGGGATGTCTGACTCAGATGCAGAACAGGACCTGGGAATCCATTCTCAATCTGCTATTGATGCATCAATATGCTTGAGTTCCTTTGGTGTACAGTTGGAGCACAATTTAACAGAAGCAGAGGTTGAAAATCTGGCAAAAAAGAAATGGAGATATAAATGGGATGTGCCTGCTGCTGGAATGTCAAAAGGCAAATGGGCAGGAACGGGAGAGTGTTGCATAAAAGATGTTAATCCCGATTCTAGTTATGATCTGAAGCAAAAGTTGTATAAGCACTGGTTGGATTTATATAACACATCTGGACGCAAGGATTTTCATTCGTCCAGACAAAGATTGTTCTTCTCCCTCTTCAATAGTTATCGGGATATACTGCATTGCAACAAGAAACCCTTTTATCACAGAGGATCAGAAGAAGACTCAAGTGTCATGGATGCATATATTATGCATTGTCTGAACCATATCTTCAGAACTAGAGATCTTGTAATGAAGAATGATGCAAAAGTGGGCAAGCATCAGGAAAATGCTAAGAATGTAATTCTTACTGATGACAGTCTCCGTGATCACGGCTTTACTCGTCCTAAGGTGTTGATCCTACTGCCAATGGCGAGCATTGCACTTCGTGTTGTTAAGAGGATAATACAACTTACCCCTTCGGCTCACAAGGTTAATGTGGACCACATGGACCGATTTTCTAAAGAGTTCGGAAGTGAAGAGGTTCTTGACAATGAAGATGAAAGAGATATACCACCAGGTGACCAGAACTCTGGAAATGTAAAACCTCACAAGTCATCGAAACCTAGTGACTTCCAAGCACTTTTTGGTGGTAATAGCAAGGATGATTTCATGGTTGGCATCAAGTTCACAAAGAGGAGCATAAAGTTGTACAGTGATTTTTATTCCTCAGATATGATAGTTGCTTCTGCTGTTGGTTTGTTGAAAAAAATTGATGAGGCTAAAATAAATAAGGAAAAGGATGTCGACTATCTTTCCTCTATAGAGGTTCTGATCATTGATCATGCAGATGTTATAACAATGCAGAACTGGGACTTTTTGAAGTCAGTTGTTGAGCAGTTAAACCATCAACCATCTAAGCAGCATGGAACTGATATCATGCGTATAAGGCCATGGTACCTGGATGGACATGCATCTTTTTATAGGCAAACTATACTTTTGAGTTATTATTCAAACCCAGATATAAACAATTTGTTTAACAAGCACTGCACAAATTACCGTGGGAAGGTGAAGTTGGTGCATGAGTATAAAGGAGTTCTTCCTAAAGTGGTACTTCAAGTACGCCAGATTTTTCAGCGGTTTGAGGGAGATGAAATAGTGAATATTGATGATGCTCGTTTTGAACATTTTGCTACTAAGGTCTTCCCCAAGATAAAAAACTCTGTTGAGGGTGGGATTTTGATATTTATCAGCTCTTACTTTGAATATGTTCGAGTTCGTAATTTTTTGAAGTCACAGAATGCATCCTTCTGTCTGCTTCATGAATATGCGGAGCAAAAAGATATTTCCCGTGCACGGGTTTGGTTCTTTGAAGGAAAGCGGAAGATCATGCTCTACACAGAGAGAGCACATTTTTACCACAGATATAAGATCCGTGGAATTCAGAATTTAATCGTCTATTCGTTGCCGGAGAGAAAGGAATTTTACCCTGAGGTTGTTAATATGGTTGATGGATCCCATGACATGGCATGCACGGTGCTCTTTTCTCCTTTTGATCTTCTCCGGCTTGAGAGAATTGTGGGAACTGCTCCAGCAAAGAGAATGGTGTCATCGAAAATGAATTTATTTTCTTTCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0019843 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UTP25

Protein Analysis

782

Amino Acids

89.28

Weight (kDa)

5.72

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UTP25_NTPase-like	PF22916	298 - 592	6.6e-107	UTP25, NTP hydrolase-like domain
Utp25_C	PF06862	603 - 780	5e-63	Utp25, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17690
fragaria_vesca	FvH4_4g07640 FvH4_4g07640 FvH4_4g07640 FvH4_4g07640
malus_domestica	MD03G1036400.v1.1 MD13G1251100.v1.1 MD13G1251200.v1.1
prunus_persica	Prupe.1G079600_v2.0.a1 Prupe.1G079600_v2.0.a1
pyrus_communis	pycom03g02780 pycom13g21610 pycom13g22640 pycom13g22650
rosa_chinensis	RchiOBHm_Chr4g0400251
rosa_laevigata	RLG00000009200
rosa_multiflora	Rmu_co7994400.1_g000001 Rmu_sc0003908.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345230
rosa_rugosa	Rorug04G0024200 Rorug04G0024300 Rorug04G0024400
rosa_samantha	Rh4AG099900 Rh4AG100300 Rh4BG097500 Rh4CG109100 Rh4DG094400
rosa_wichuraiana	Rw4G008260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	189, 1562
AasI	GACNNNNNNGTC	1 cut(s)	956
Acc65I	GGTACC	1 cut(s)	1662
AccB1I	GGYRCC	1 cut(s)	1662
AccB7I	CCANNNNNTGG	1 cut(s)	2230
AccI	GTMKAC	1 cut(s)	1512
AccII	CGCG	1 cut(s)	489
AciI	CCGC	7 cut(s)	104, 251, 339, 487, 1843, 2036, 2086
AclWI	GGATC	6 cut(s)	422, 946, 1117, 2131, 2214, 2227
AcsI	RAATTY	5 cut(s)	401, 2145, 2152, 2186, 2326
AcuI	CTGAAG	2 cut(s)	809, 982
AdeI	CACNNNGTG	2 cut(s)	1154, 1286
AfaI	GTAC	5 cut(s)	627, 1418, 1664, 1818, 1827
AfiI	CCNNNNNNNGG	6 cut(s)	413, 710, 1771, 2061, 2062, 2230
AjnI	CCWGG	4 cut(s)	25, 567, 1282, 1665
AjuI	GAANNNNNNNTTGG	2 cut(s)	1763, 1795
AluBI	AGCT	2 cut(s)	245, 1959
AluI	AGCT	2 cut(s)	245, 1959
Alw21I	GWGCWC	4 cut(s)	639, 2062, 2116, 2247
Alw26I	GTCTC	3 cut(s)	485, 509, 1091
Alw44I	GTGCAC	1 cut(s)	2058
AlwI	GGATC	6 cut(s)	422, 946, 1117, 2131, 2214, 2227
AlwNI	CAGNNNCTG	1 cut(s)	568
AoxI	GGCC	1 cut(s)	1655
ApaLI	GTGCAC	1 cut(s)	2058
ApeKI	GCWGC	3 cut(s)	254, 707, 1627
ApoI	RAATTY	5 cut(s)	401, 2145, 2152, 2186, 2326
Asp700I	GAANNNNTTC	3 cut(s)	577, 1248, 1974
Asp718I	GGTACC	1 cut(s)	1662
AspLEI	GCGC	1 cut(s)	226
AspS9I	GGNCC	3 cut(s)	565, 1207, 1216
AsuHPI	GGTGA	4 cut(s)	392, 404, 1298, 1786
AsuNHI	GCTAGC	1 cut(s)	110
AvaII	GGWCC	3 cut(s)	565, 1207, 1216
AxyI	CCTNAGG	2 cut(s)	1113, 2196
BaeGI	GKGCMC	1 cut(s)	2062
BamHI	GGATCC	1 cut(s)	2219
BanI	GGYRCC	1 cut(s)	1662
BbsI	GAAGAC	2 cut(s)	954, 1900
Bbv12I	GWGCWC	4 cut(s)	639, 2062, 2116, 2247
BbvI	GCAGC	3 cut(s)	241, 694, 1639
BccI	CCATC	9 cut(s)	24, 205, 214, 329, 371, 1620, 1627, 1664, 2210
BceAI	ACGGC	1 cut(s)	1114
BciT130I	CCWGG	4 cut(s)	27, 569, 1284, 1667
BclI	TGATCA	5 cut(s)	460, 532, 1093, 1539, 1546
BcoDI	GTCTC	3 cut(s)	485, 509, 1091
BfaI	CTAG	7 cut(s)	111, 227, 237, 354, 777, 1005, 1332
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	1 cut(s)	227
BglII	AGATCT	1 cut(s)	1009
BisI	GCNGC	4 cut(s)	252, 255, 708, 1628
BlsI	GCNGC	4 cut(s)	253, 256, 709, 1629
Bme1390I	CCNGG	4 cut(s)	27, 569, 1284, 1667
Bme18I	GGWCC	3 cut(s)	565, 1207, 1216
BmgT120I	GGNCC	3 cut(s)	565, 1207, 1216
BmiI	GGNNCC	2 cut(s)	1664, 2221
BmrFI	CCNGG	4 cut(s)	27, 569, 1284, 1667
BmrI	ACTGGG	1 cut(s)	1585
BmtI	GCTAGC	1 cut(s)	114
BmuI	ACTGGG	1 cut(s)	1585
BpiI	GAAGAC	2 cut(s)	954, 1900
BpmI	CTGGAG	1 cut(s)	2280
BpuEI	CTTGAG	3 cut(s)	631, 937, 2294
BsaBI	GATNNNNATC	2 cut(s)	765, 1952
BsaI	GGTCTC	2 cut(s)	485, 509
BsaJI	CCNNGG	5 cut(s)	25, 568, 1658, 1765, 2140
Bsc4I	CCNNNNNNNGG	6 cut(s)	413, 710, 1771, 2061, 2062, 2230
Bse1I	ACTGG	3 cut(s)	407, 815, 1580
Bse21I	CCTNAGG	2 cut(s)	1113, 2196
Bse3DI	GCAATG	2 cut(s)	907, 1143
Bse8I	GATNNNNATC	2 cut(s)	765, 1952
BseBI	CCWGG	4 cut(s)	27, 569, 1284, 1667
BseDI	CCNNGG	5 cut(s)	25, 568, 1658, 1765, 2140
BseJI	GATNNNNATC	2 cut(s)	765, 1952
BseLI	CCNNNNNNNGG	6 cut(s)	413, 710, 1771, 2061, 2062, 2230
BseMI	GCAATG	2 cut(s)	907, 1143
BseMII	CTCAG	5 cut(s)	318, 444, 564, 1449, 2187
BseNI	ACTGG	3 cut(s)	407, 815, 1580
BseRI	GAGGAG	6 cut(s)	326, 329, 332, 335, 338, 1417
BseSI	GKGCMC	1 cut(s)	2062
BseXI	GCAGC	3 cut(s)	241, 694, 1639
BsgI	GTGCAG	1 cut(s)	1738
Bsh1236I	CGCG	1 cut(s)	489
BshFI	GGCC	1 cut(s)	1657
BshNI	GGYRCC	1 cut(s)	1662
BsiHKAI	GWGCWC	4 cut(s)	639, 2062, 2116, 2247
BsiSI	CCGG	3 cut(s)	431, 2174, 2269
BslFI	GGGAC	1 cut(s)	1592
BslI	CCNNNNNNNGG	6 cut(s)	413, 710, 1771, 2061, 2062, 2230
BsmAI	GTCTC	3 cut(s)	485, 509, 1091
BsmFI	GGGAC	1 cut(s)	1592
BsmI	GAATGC	1 cut(s)	2011
BsnI	GGCC	1 cut(s)	1657
Bso31I	GGTCTC	2 cut(s)	485, 509
Bsp1286I	GDGCHC	4 cut(s)	639, 2062, 2116, 2247
Bsp1407I	TGTACA	2 cut(s)	625, 1416
Bsp19I	CCATGG	1 cut(s)	1658
BspACI	CCGC	7 cut(s)	104, 251, 339, 487, 1843, 2036, 2086
BspANI	GGCC	1 cut(s)	1657
BspCNI	CTCAG	5 cut(s)	317, 445, 563, 1448, 2188
BspFNI	CGCG	1 cut(s)	489
BspHI	TCATGA	1 cut(s)	2026
BspLI	GGNNCC	2 cut(s)	1664, 2221
BspOI	GCTAGC	1 cut(s)	114
BspPI	GGATC	6 cut(s)	422, 946, 1117, 2131, 2214, 2227
BspT107I	GGYRCC	1 cut(s)	1662
BspTNI	GGTCTC	2 cut(s)	485, 509
BsrDI	GCAATG	2 cut(s)	907, 1143
BsrGI	TGTACA	2 cut(s)	625, 1416
BsrI	ACTGG	3 cut(s)	407, 815, 1580
BssECI	CCNNGG	5 cut(s)	25, 568, 1658, 1765, 2140
BssT1I	CCWWGG	1 cut(s)	1658
Bst2UI	CCWGG	4 cut(s)	27, 569, 1284, 1667
Bst4CI	ACNGT	5 cut(s)	630, 1085, 1421, 1766, 2242
Bst6I	CTCTTC	3 cut(s)	303, 887, 1239
BstAUI	TGTACA	2 cut(s)	625, 1416
BstC8I	GCNNGC	5 cut(s)	112, 705, 1043, 1141, 2236
BstDEI	CTNAG	9 cut(s)	304, 453, 550, 1059, 1113, 1435, 1623, 1902, 2196
BstDSI	CCRYGG	3 cut(s)	1658, 1765, 2140
BstEII	GGTNACC	1 cut(s)	1286
BstFNI	CGCG	1 cut(s)	489
BstH2I	RGCGCY	1 cut(s)	227
BstHHI	GCGC	1 cut(s)	226
BstMAI	GTCTC	3 cut(s)	485, 509, 1091
BstMWI	GCNNNNNNNGC	4 cut(s)	251, 596, 1145, 1654
BstNI	CCWGG	4 cut(s)	27, 569, 1284, 1667
BstNSI	RCATGY	2 cut(s)	1679, 2238
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	4 cut(s)	25, 567, 1282, 1665
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	1 cut(s)	2062
BstUI	CGCG	1 cut(s)	489
BstV1I	GCAGC	3 cut(s)	241, 694, 1639
BstV2I	GAAGAC	2 cut(s)	954, 1900
BstX2I	RGATCY	4 cut(s)	427, 1009, 2136, 2219
BstXI	CCANNNNNNTGG	3 cut(s)	68, 163, 1298
BstYI	RGATCY	4 cut(s)	427, 1009, 2136, 2219
Bsu36I	CCTNAGG	2 cut(s)	1113, 2196
BsuRI	GGCC	1 cut(s)	1657
BtgI	CCRYGG	3 cut(s)	1658, 1765, 2140
BtsI	GCAGTG	1 cut(s)	1750
BtsIMutI	CAGTG	4 cut(s)	414, 808, 1426, 1750
Cac8I	GCNNGC	5 cut(s)	112, 705, 1043, 1141, 2236
CaiI	CAGNNNCTG	1 cut(s)	568
CciI	TCATGA	1 cut(s)	2026
CfoI	GCGC	1 cut(s)	226
Cfr13I	GGNCC	3 cut(s)	565, 1207, 1216
CseI	GACGC	1 cut(s)	846
CsiI	ACCWGGT	1 cut(s)	1282
Csp6I	GTAC	5 cut(s)	626, 1417, 1663, 1817, 1826
CviQI	GTAC	5 cut(s)	626, 1417, 1663, 1817, 1826
DdeI	CTNAG	9 cut(s)	304, 453, 550, 1059, 1113, 1435, 1623, 1902, 2196
DraIII	CACNNNGTG	2 cut(s)	1154, 1286
DrdI	GACNNNNNNGTC	1 cut(s)	956
DseDI	GACNNNNNNGTC	1 cut(s)	956
Eam1104I	CTCTTC	3 cut(s)	303, 887, 1239
EarI	CTCTTC	3 cut(s)	303, 887, 1239
EciI	GGCGGA	1 cut(s)	354
Eco130I	CCWWGG	1 cut(s)	1658
Eco31I	GGTCTC	2 cut(s)	485, 509
Eco32I	GATATC	1 cut(s)	1642
Eco47I	GGWCC	3 cut(s)	565, 1207, 1216
Eco57I	CTGAAG	2 cut(s)	809, 982
Eco81I	CCTNAGG	2 cut(s)	1113, 2196
Eco91I	GGTNACC	1 cut(s)	1286
EcoO109I	RGGNCCY	1 cut(s)	565
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	2145
EcoRII	CCWGG	4 cut(s)	25, 567, 1282, 1665
EcoRV	GATATC	1 cut(s)	1642
EcoT14I	CCWWGG	1 cut(s)	1658
EcoT22I	ATGCAT	5 cut(s)	601, 970, 981, 1681, 2011
ErhI	CCWWGG	1 cut(s)	1658
FalI	AAGNNNNNCTT	8 cut(s)	908, 940, 1236, 1268, 1788, 1820, 1803, 1835
FaqI	GGGAC	1 cut(s)	1592
FbaI	TGATCA	5 cut(s)	460, 532, 1093, 1539, 1546
FblI	GTMKAC	1 cut(s)	1512
Fnu4HI	GCNGC	4 cut(s)	252, 255, 708, 1628
Fsp4HI	GCNGC	4 cut(s)	252, 255, 708, 1628
FspBI	CTAG	7 cut(s)	111, 227, 237, 354, 777, 1005, 1332
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	4 cut(s)	252, 255, 708, 1628
GsuI	CTGGAG	1 cut(s)	2280
HaeII	RGCGCY	1 cut(s)	227
HaeIII	GGCC	1 cut(s)	1657
HapII	CCGG	3 cut(s)	431, 2174, 2269
HgaI	GACGC	1 cut(s)	846
HhaI	GCGC	1 cut(s)	226
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HincII	GTYRAC	1 cut(s)	1513
HindII	GTYRAC	1 cut(s)	1513
HinfI	GANTC	9 cut(s)	152, 296, 302, 347, 524, 548, 573, 773, 950
HpaII	CCGG	3 cut(s)	431, 2174, 2269
HphI	GGTGA	4 cut(s)	392, 404, 1298, 1786
Hpy166II	GTNNAC	5 cut(s)	626, 1207, 1395, 1513, 2060
Hpy8I	GTNNAC	5 cut(s)	626, 1207, 1395, 1513, 2060
Hpy99I	CGWCG	1 cut(s)	84
HpyAV	CCTTC	6 cut(s)	278, 380, 1194, 1765, 2023, 2072
HpyCH4III	ACNGT	5 cut(s)	630, 1085, 1421, 1766, 2242
HpyF10VI	GCNNNNNNNGC	4 cut(s)	251, 596, 1145, 1654
HpyF3I	CTNAG	9 cut(s)	304, 453, 550, 1059, 1113, 1435, 1623, 1902, 2196
HspAI	GCGC	1 cut(s)	224
KpnI	GGTACC	1 cut(s)	1666
Ksp22I	TGATCA	5 cut(s)	460, 532, 1093, 1539, 1546
LmnI	GCTCC	4 cut(s)	634, 1404, 2038, 2299
Lsp1109I	GCAGC	3 cut(s)	241, 694, 1639
MabI	ACCWGGT	1 cut(s)	1282
MaeI	CTAG	7 cut(s)	111, 227, 237, 354, 777, 1005, 1332
MaeIII	GTNAC	6 cut(s)	293, 356, 392, 1286, 1334, 1998
MflI	RGATCY	4 cut(s)	427, 1009, 2136, 2219
MhlI	GDGCHC	4 cut(s)	639, 2062, 2116, 2247
MlyI	GAGTC	5 cut(s)	290, 296, 518, 542, 944
MmeI	TCCRAC	2 cut(s)	612, 795
Mph1103I	ATGCAT	5 cut(s)	601, 970, 981, 1681, 2011
MroXI	GAANNNNTTC	3 cut(s)	577, 1248, 1974
MseI	TTAA	8 cut(s)	644, 765, 1161, 1200, 1607, 1743, 2156, 2205
MslI	CAYNNNNRTG	3 cut(s)	604, 1554, 2031
MspA1I	CMGCKG	1 cut(s)	1843
MspI	CCGG	3 cut(s)	431, 2174, 2269
MspR9I	CCNGG	4 cut(s)	27, 569, 1284, 1667
Mva1269I	GAATGC	1 cut(s)	2011
MvaI	CCWGG	4 cut(s)	27, 569, 1284, 1667
MvnI	CGCG	1 cut(s)	489
MwoI	GCNNNNNNNGC	4 cut(s)	251, 596, 1145, 1654
NcoI	CCATGG	1 cut(s)	1658
NheI	GCTAGC	1 cut(s)	110
NlaIV	GGNNCC	2 cut(s)	1664, 2221
NmuCI	GTSAC	6 cut(s)	293, 356, 392, 1286, 1334, 1998
NsiI	ATGCAT	5 cut(s)	601, 970, 981, 1681, 2011
NspI	RCATGY	2 cut(s)	1679, 2238
PaeI	GCATGC	1 cut(s)	2238
PagI	TCATGA	1 cut(s)	2026
PctI	GAATGC	1 cut(s)	2011
PdmI	GAANNNNTTC	3 cut(s)	577, 1248, 1974
PfeI	GAWTC	4 cut(s)	152, 347, 573, 773
PflMI	CCANNNNNTGG	1 cut(s)	2230
PkrI	GCNGC	4 cut(s)	253, 256, 709, 1629
PleI	GAGTC	5 cut(s)	290, 296, 518, 542, 944
PpsI	GAGTC	5 cut(s)	290, 296, 518, 542, 944
PpuMI	RGGWCCY	1 cut(s)	565
PsiI	TTATAA	2 cut(s)	189, 1562
Psp5II	RGGWCCY	1 cut(s)	565
Psp6I	CCWGG	4 cut(s)	25, 567, 1282, 1665
PspEI	GGTNACC	1 cut(s)	1286
PspGI	CCWGG	4 cut(s)	25, 567, 1282, 1665
PspN4I	GGNNCC	2 cut(s)	1664, 2221
PspPI	GGNCC	3 cut(s)	565, 1207, 1216
PspPPI	RGGWCCY	1 cut(s)	565
PstNI	CAGNNNCTG	1 cut(s)	568
PsuI	RGATCY	4 cut(s)	427, 1009, 2136, 2219
RsaI	GTAC	5 cut(s)	627, 1418, 1664, 1818, 1827
RsaNI	GTAC	5 cut(s)	626, 1417, 1663, 1817, 1826
RseI	CAYNNNNRTG	3 cut(s)	604, 1554, 2031
SalI	GTCGAC	1 cut(s)	1511
SaqAI	TTAA	8 cut(s)	644, 765, 1161, 1200, 1607, 1743, 2156, 2205
SatI	GCNGC	4 cut(s)	252, 255, 708, 1628
Sau96I	GGNCC	3 cut(s)	565, 1207, 1216
SchI	GAGTC	5 cut(s)	290, 296, 518, 542, 944
ScrFI	CCNGG	4 cut(s)	27, 569, 1284, 1667
SduI	GDGCHC	4 cut(s)	639, 2062, 2116, 2247
SexAI	ACCWGGT	1 cut(s)	1282
SfcI	CTRYAG	1 cut(s)	1527
SinI	GGWCC	3 cut(s)	565, 1207, 1216
SmiMI	CAYNNNNRTG	3 cut(s)	604, 1554, 2031
SmlI	CTYRAG	3 cut(s)	610, 952, 2273
SmoI	CTYRAG	3 cut(s)	610, 952, 2273
SphI	GCATGC	1 cut(s)	2238
SsiI	CCGC	7 cut(s)	104, 251, 339, 487, 1843, 2036, 2086
SspI	AATATT	1 cut(s)	1870
SspMI	CTAG	7 cut(s)	111, 227, 237, 354, 777, 1005, 1332
StyD4I	CCNGG	4 cut(s)	25, 567, 1282, 1665
StyI	CCWWGG	1 cut(s)	1658
TaaI	ACNGT	5 cut(s)	630, 1085, 1421, 1766, 2242
TaqI	TCGA	4 cut(s)	1325, 1512, 1978, 2318
TaqII	GACCGA	1 cut(s)	1233
TatI	WGTACW	2 cut(s)	625, 1416
TauI	GCSGC	1 cut(s)	254
TfiI	GAWTC	4 cut(s)	152, 347, 573, 773
Tru1I	TTAA	8 cut(s)	644, 765, 1161, 1200, 1607, 1743, 2156, 2205
Tru9I	TTAA	8 cut(s)	644, 765, 1161, 1200, 1607, 1743, 2156, 2205
TscAI	CASTG	4 cut(s)	414, 815, 1426, 1757
TseFI	GTSAC	6 cut(s)	293, 356, 392, 1286, 1334, 1998
TseI	GCWGC	3 cut(s)	254, 707, 1627
Tsp45I	GTSAC	6 cut(s)	293, 356, 392, 1286, 1334, 1998
TspGWI	ACGGA	2 cut(s)	1079, 2129
TspRI	CASTG	4 cut(s)	414, 815, 1426, 1757
Van91I	CCANNNNNTGG	1 cut(s)	2230
VneI	GTGCAC	1 cut(s)	2058
VpaK11BI	GGWCC	3 cut(s)	565, 1207, 1216
XapI	RAATTY	5 cut(s)	401, 2145, 2152, 2186, 2326
XceI	RCATGY	2 cut(s)	1679, 2238
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1349
XmiI	GTMKAC	1 cut(s)	1512
XmnI	GAANNNNTTC	3 cut(s)	577, 1248, 1974
XspI	CTAG	7 cut(s)	111, 227, 237, 354, 777, 1005, 1332
Zsp2I	ATGCAT	5 cut(s)	601, 970, 981, 1681, 2011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.