Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005811

Physical Location & Seq

Genomic Coordinates Reverse (-)

15546823 .. 15561626

Gene Structure 14804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00345230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGGGAAGCAATCAGGCCAGAACCCAGGATGGAGGAAACGCAAAATGCCCAACAAGTTCCAGAAAGGTGGGAAAAATCGCCGGGTTGAAGAAGAAAAGGTTGTGGCGGCTAGCCCCTCATCTACTTCATCAGGGGAACTGCTAGAGGAAGAATCCAATGGTGTGGCTTCCGAAGAAGAAATAGTTTATAAGGAGCCATCAATGTATGACAAATTGTTGATGGCACTAGGGTCATCTAGTAAAGCTGTTGCGGCTGCCTATAAGCAGAGAAAAAGACAAGAAGAAGGTAAAAGTGACTCGGACTCAGAAGAGGAGGAGGAGGAGGAGGATGACGATGACGGAACTGAATCTTCTAGTGATTTGGAAGAAGTAGATGATGATGAAGAAGGGGGTGACAATGAATTTCCAATGAAAGGAAAACTGAAACATCCGGCAAGTGAAGATGCAAAAACTGAGGATGATCAGGACACCTCTGACTCGGATGACCGCGAGACCTCTGACTCGGATGACCAGGGGATGTCTGACTCAGATGCAGAACAGGACCTGGGAATCCATTCTCAATCTGCTATTGATGCATCAATATGCTTGAGTTCCTTTGGTGCACAGTTGGAGCACAAGTTAACAGAAGCAGAGGTTGAAAATCTGGCCAAAAAGAAATGGAGATATAAATGGGATGTGCCTGCTGCTGGAATGTCAAAGGGCAAATGGGCAGGAACGGGAGAGTGTTGCATAAAAGATGTTAATCCCGATTCTAGTTATGATCTGAAGCAAAAGTTGTATAAGCACTGGTTGGATGTATATAACACATCTGGACGCAAGGATTTTCATTCGTCCAGACAAAGATTGTTCTTCTCCCTCTTCAATAGTTATCGGGATATACTGCATTGCAACAAGAAACCCTTTTATCACAGAGGATCAGAAGAAGACTCAAGTGTCATGGATGCATATATTATGCATTGTCTGAACCATATCTTCAGAACTAGAGATCTTGTAATGAAGAATGATGCAAAAGTGGCCAAGCATCAGGAAAATGCTAAGAATGTAATTCTTACTGATGACAGTCTCCGTGATCATGGCTTTACTCGTCCTAAGGTGTTGATCCTACTGCCAATGGCGAGCATTGCACTTCGTGTTGTTAAGAGGATAATACAACTTACCCCTTCAGCTCACAAGGTTAATGTGGACCACATGGACCGATTTTCTAAAGAGTTCGGAAGTGAAGAGGTTCTTGACAATGAAGACGAAAGAGATATACCACCAGGTGACCAGAACTCTGGAAATGTAAAACCTCACAAGTCATCAAAACCTAGTGACTTCCAAGTACTTTTCAGTGGTAATAGCAAGGATGATTTCACGGTTGGCATCAAGTTCACAAAGAGGAGCATAAAGTTGTACAGTGATTTTTATTCCTCAGATATGATAGTTGCTTCTGCTGTTGGTTTCTTGAAAAAAATTGATGAGGCTAAAATAAATAAGGAAAAGGACGTCGACTATCTTTCTTCTATAGAGGTTCTGATCATTGATCATGCAGATGTTATAACAATGCAGAACTGGGACTTTTTGAAGTCAGTTGTTGAGCAGTTAAACCATCAACCATCCAAGCAGCATGGATCTGATATCATGCGTATAAGGCCATGGTACCTGGATGGACATGCATCTTTTTATAGGCAAACTATACTTTTGAGTTATTATTCAAACCCAGATATAAACAATTTGTTTAACAAGCACTGCACAAATTACCGTGGGAAGGTGAAGTTGGTGCATGAATATAAAGGAGTTCTTCCTAAAGTGGTACTTCAAGTACGCCAGATTTTTCAGCGGTTTGAGGGAGATGAAATAGTGAATATTGATGATGCTCGTTTTGAACATTTTGCTACTAAGGTCTTCCCCAAGATAAAAAACTCTGTTGAGGGCGGGATTATGATATTTATCAGCTCATACTTTGAATATGTTCGAGTTCGTAATTTTTTGAAGTCACAGAATGCATCCTTCTGTCTGCTTCATGAATATGCGGAGCAAAAAGATATTTCCCGTGCACGGGTTTGGTTCTTTGAAGGAAAGCGGAAGATCATGCTCTACACAGAGAGAGCACATTTTTACCACAGATATAAGATCCGTGGAATTCAGAATTTAATCGTCTATTCGTTGCCGGAGAGAAAGGAATTTTACCCTGAGGTTGTTAATATGGTTGATGGATCCCATGACATGGCATGCACGGTGCTCTTTTCTCCTTTTGATCTCCTCCGGCTTGAGAGAATTGTGGGAACTGCTCCAGCAAAGAGAATGGTGTCATCGAAAATGAATTTATTTTCTTTCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0019843 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UTP25

Protein Analysis

773

Amino Acids

88.62

Weight (kDa)

5.83

Isoelectric Point (pI)

48.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UTP25_NTPase-like	PF22916	290 - 584	2.6e-105	UTP25, NTP hydrolase-like domain
Utp25_C	PF06862	595 - 772	7.1e-63	Utp25, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17690
fragaria_vesca	FvH4_4g07640 FvH4_4g07640 FvH4_4g07640 FvH4_4g07640
malus_domestica	MD03G1036400.v1.1 MD13G1251100.v1.1 MD13G1251200.v1.1
prunus_persica	Prupe.1G079600_v2.0.a1 Prupe.1G079600_v2.0.a1
pyrus_communis	pycom03g02780 pycom13g21610 pycom13g22640 pycom13g22650
rosa_chinensis	RchiOBHm_Chr4g0400251
rosa_laevigata	RLG00000009200
rosa_multiflora	Rmu_co7994400.1_g000001 Rmu_sc0003908.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345230
rosa_rugosa	Rorug04G0024200 Rorug04G0024300 Rorug04G0024400
rosa_samantha	Rh4AG099900 Rh4AG100300 Rh4BG097500 Rh4CG109100 Rh4DG094400
rosa_wichuraiana	Rw4G008260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	189, 1538
AasI	GACNNNNNNGTC	1 cut(s)	932
AatII	GACGTC	1 cut(s)	1488
Acc65I	GGTACC	1 cut(s)	1638
AccB1I	GGYRCC	1 cut(s)	1638
AccB7I	CCANNNNNTGG	1 cut(s)	2206
AccI	GTMKAC	1 cut(s)	1488
AccII	CGCG	1 cut(s)	489
AciI	CCGC	7 cut(s)	107, 251, 487, 1819, 1914, 2012, 2062
AclWI	GGATC	6 cut(s)	922, 1093, 1618, 2107, 2190, 2203
AcoI	YGGCCR	2 cut(s)	645, 1014
AcsI	RAATTY	5 cut(s)	401, 2121, 2128, 2162, 2302
AcuI	CTGAAG	3 cut(s)	785, 958, 1146
AcyI	GRCGYC	1 cut(s)	1485
AdeI	CACNNNGTG	2 cut(s)	1130, 1262
AfaI	GTAC	5 cut(s)	1323, 1394, 1640, 1794, 1803
AfiI	CCNNNNNNNGG	6 cut(s)	413, 686, 1747, 2037, 2038, 2206
AjnI	CCWGG	5 cut(s)	25, 510, 543, 1258, 1641
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
AluBI	AGCT	3 cut(s)	245, 1166, 1935
AluI	AGCT	3 cut(s)	245, 1166, 1935
Alw21I	GWGCWC	5 cut(s)	604, 615, 2038, 2092, 2223
Alw26I	GTCTC	2 cut(s)	485, 1067
Alw44I	GTGCAC	2 cut(s)	600, 2034
AlwI	GGATC	6 cut(s)	922, 1093, 1618, 2107, 2190, 2203
AlwNI	CAGNNNCTG	1 cut(s)	544
AoxI	GGCC	4 cut(s)	16, 645, 1014, 1631
ApaLI	GTGCAC	2 cut(s)	600, 2034
ApeKI	GCWGC	3 cut(s)	254, 683, 1603
ApoI	RAATTY	5 cut(s)	401, 2121, 2128, 2162, 2302
Asp700I	GAANNNNTTC	3 cut(s)	553, 1224, 1950
Asp718I	GGTACC	1 cut(s)	1638
AspS9I	GGNCC	3 cut(s)	541, 1183, 1192
AsuC2I	CCSGG	1 cut(s)	83
AsuHPI	GGTGA	3 cut(s)	404, 1274, 1762
AsuNHI	GCTAGC	1 cut(s)	110
AvaII	GGWCC	3 cut(s)	541, 1183, 1192
AxyI	CCTNAGG	2 cut(s)	1089, 2172
BaeGI	GKGCMC	2 cut(s)	604, 2038
BalI	TGGCCA	2 cut(s)	647, 1016
BamHI	GGATCC	1 cut(s)	2195
BanI	GGYRCC	1 cut(s)	1638
BbsI	GAAGAC	3 cut(s)	930, 1245, 1876
Bbv12I	GWGCWC	5 cut(s)	604, 615, 2038, 2092, 2223
BbvI	GCAGC	3 cut(s)	241, 670, 1615
BccI	CCATC	7 cut(s)	24, 205, 214, 1596, 1603, 1640, 2186
BciT130I	CCWGG	5 cut(s)	27, 512, 545, 1260, 1643
BclI	TGATCA	4 cut(s)	460, 1069, 1515, 1522
BcnI	CCSGG	1 cut(s)	83
BcoDI	GTCTC	2 cut(s)	485, 1067
BfaI	CTAG	8 cut(s)	111, 143, 227, 237, 354, 753, 981, 1308
BfmI	CTRYAG	1 cut(s)	1503
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	5 cut(s)	108, 252, 255, 684, 1604
BlsI	GCNGC	5 cut(s)	109, 253, 256, 685, 1605
BmcAI	AGTACT	1 cut(s)	1323
Bme1390I	CCNGG	6 cut(s)	27, 83, 512, 545, 1260, 1643
Bme18I	GGWCC	3 cut(s)	541, 1183, 1192
BmgT120I	GGNCC	3 cut(s)	541, 1183, 1192
BmiI	GGNNCC	3 cut(s)	195, 1640, 2197
BmrFI	CCNGG	6 cut(s)	27, 83, 512, 545, 1260, 1643
BmrI	ACTGGG	1 cut(s)	1561
BmtI	GCTAGC	1 cut(s)	114
BmuI	ACTGGG	1 cut(s)	1561
BpiI	GAAGAC	3 cut(s)	930, 1245, 1876
BpmI	CTGGAG	1 cut(s)	2256
BpuEI	CTTGAG	3 cut(s)	607, 913, 2270
BpuMI	CCSGG	1 cut(s)	83
BsaBI	GATNNNNATC	2 cut(s)	741, 1928
BsaHI	GRCGYC	1 cut(s)	1485
BsaI	GGTCTC	1 cut(s)	485
BsaJI	CCNNGG	6 cut(s)	25, 511, 544, 1634, 1741, 2116
BsaXI	ACNNNNNCTCC	2 cut(s)	602, 632
Bsc4I	CCNNNNNNNGG	6 cut(s)	413, 686, 1747, 2037, 2038, 2206
Bse1I	ACTGG	2 cut(s)	791, 1556
Bse21I	CCTNAGG	2 cut(s)	1089, 2172
Bse3DI	GCAATG	2 cut(s)	883, 1119
Bse8I	GATNNNNATC	2 cut(s)	741, 1928
BseBI	CCWGG	5 cut(s)	27, 512, 545, 1260, 1643
BseDI	CCNNGG	6 cut(s)	25, 511, 544, 1634, 1741, 2116
BseJI	GATNNNNATC	2 cut(s)	741, 1928
BseLI	CCNNNNNNNGG	6 cut(s)	413, 686, 1747, 2037, 2038, 2206
BseMI	GCAATG	2 cut(s)	883, 1119
BseMII	CTCAG	5 cut(s)	318, 444, 540, 1425, 2163
BseNI	ACTGG	2 cut(s)	791, 1556
BseRI	GAGGAG	7 cut(s)	326, 329, 332, 335, 338, 1393, 2231
BseSI	GKGCMC	2 cut(s)	604, 2038
BseXI	GCAGC	3 cut(s)	241, 670, 1615
BsgI	GTGCAG	1 cut(s)	1714
Bsh1236I	CGCG	1 cut(s)	489
BshFI	GGCC	4 cut(s)	18, 647, 1016, 1633
BshNI	GGYRCC	1 cut(s)	1638
BsiHKAI	GWGCWC	5 cut(s)	604, 615, 2038, 2092, 2223
BsiSI	CCGG	4 cut(s)	82, 431, 2150, 2245
BslFI	GGGAC	1 cut(s)	1568
BslI	CCNNNNNNNGG	6 cut(s)	413, 686, 1747, 2037, 2038, 2206
BsmAI	GTCTC	2 cut(s)	485, 1067
BsmFI	GGGAC	1 cut(s)	1568
BsmI	GAATGC	1 cut(s)	1987
BsnI	GGCC	4 cut(s)	18, 647, 1016, 1633
Bso31I	GGTCTC	1 cut(s)	485
Bsp1286I	GDGCHC	5 cut(s)	604, 615, 2038, 2092, 2223
Bsp1407I	TGTACA	1 cut(s)	1392
Bsp19I	CCATGG	1 cut(s)	1634
BspACI	CCGC	7 cut(s)	107, 251, 487, 1819, 1914, 2012, 2062
BspANI	GGCC	4 cut(s)	18, 647, 1016, 1633
BspCNI	CTCAG	5 cut(s)	317, 445, 539, 1424, 2164
BspFNI	CGCG	1 cut(s)	489
BspHI	TCATGA	1 cut(s)	2002
BspLI	GGNNCC	3 cut(s)	195, 1640, 2197
BspOI	GCTAGC	1 cut(s)	114
BspPI	GGATC	6 cut(s)	922, 1093, 1618, 2107, 2190, 2203
BspT107I	GGYRCC	1 cut(s)	1638
BspTNI	GGTCTC	1 cut(s)	485
BsrDI	GCAATG	2 cut(s)	883, 1119
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	2 cut(s)	791, 1556
BssECI	CCNNGG	6 cut(s)	25, 511, 544, 1634, 1741, 2116
BssNI	GRCGYC	1 cut(s)	1485
BssT1I	CCWWGG	1 cut(s)	1634
Bst2UI	CCWGG	5 cut(s)	27, 512, 545, 1260, 1643
Bst4CI	ACNGT	6 cut(s)	606, 1061, 1357, 1397, 1742, 2218
Bst6I	CTCTTC	3 cut(s)	303, 863, 1215
BstACI	GRCGYC	1 cut(s)	1485
BstAUI	TGTACA	1 cut(s)	1392
BstC8I	GCNNGC	4 cut(s)	112, 681, 1117, 2212
BstDEI	CTNAG	8 cut(s)	304, 453, 526, 1035, 1089, 1411, 1878, 2172
BstDSI	CCRYGG	3 cut(s)	1634, 1741, 2116
BstEII	GGTNACC	1 cut(s)	1262
BstFNI	CGCG	1 cut(s)	489
BstMAI	GTCTC	2 cut(s)	485, 1067
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 572, 1013, 1121, 1630
BstNI	CCWGG	5 cut(s)	27, 512, 545, 1260, 1643
BstNSI	RCATGY	2 cut(s)	1655, 2214
BstPI	GGTNACC	1 cut(s)	1262
BstSCI	CCNGG	6 cut(s)	25, 81, 510, 543, 1258, 1641
BstSFI	CTRYAG	1 cut(s)	1503
BstSLI	GKGCMC	2 cut(s)	604, 2038
BstUI	CGCG	1 cut(s)	489
BstV1I	GCAGC	3 cut(s)	241, 670, 1615
BstV2I	GAAGAC	3 cut(s)	930, 1245, 1876
BstX2I	RGATCY	4 cut(s)	985, 1610, 2112, 2195
BstXI	CCANNNNNNTGG	3 cut(s)	68, 163, 1274
BstYI	RGATCY	4 cut(s)	985, 1610, 2112, 2195
Bsu36I	CCTNAGG	2 cut(s)	1089, 2172
BsuRI	GGCC	4 cut(s)	18, 647, 1016, 1633
BtgI	CCRYGG	3 cut(s)	1634, 1741, 2116
BtsI	GCAGTG	1 cut(s)	1726
BtsIMutI	CAGTG	4 cut(s)	784, 1336, 1402, 1726
Cac8I	GCNNGC	4 cut(s)	112, 681, 1117, 2212
CaiI	CAGNNNCTG	1 cut(s)	544
CciI	TCATGA	1 cut(s)	2002
Cfr13I	GGNCC	3 cut(s)	541, 1183, 1192
CseI	GACGC	1 cut(s)	822
CsiI	ACCWGGT	1 cut(s)	1258
Csp6I	GTAC	5 cut(s)	1322, 1393, 1639, 1793, 1802
CviQI	GTAC	5 cut(s)	1322, 1393, 1639, 1793, 1802
DdeI	CTNAG	8 cut(s)	304, 453, 526, 1035, 1089, 1411, 1878, 2172
DraIII	CACNNNGTG	2 cut(s)	1130, 1262
DrdI	GACNNNNNNGTC	1 cut(s)	932
DseDI	GACNNNNNNGTC	1 cut(s)	932
EaeI	YGGCCR	2 cut(s)	645, 1014
Eam1104I	CTCTTC	3 cut(s)	303, 863, 1215
EarI	CTCTTC	3 cut(s)	303, 863, 1215
Eco130I	CCWWGG	1 cut(s)	1634
Eco31I	GGTCTC	1 cut(s)	485
Eco32I	GATATC	1 cut(s)	1618
Eco47I	GGWCC	3 cut(s)	541, 1183, 1192
Eco57I	CTGAAG	3 cut(s)	785, 958, 1146
Eco81I	CCTNAGG	2 cut(s)	1089, 2172
Eco91I	GGTNACC	1 cut(s)	1262
EcoO109I	RGGNCCY	1 cut(s)	541
EcoO65I	GGTNACC	1 cut(s)	1262
EcoRI	GAATTC	1 cut(s)	2121
EcoRII	CCWGG	5 cut(s)	25, 510, 543, 1258, 1641
EcoRV	GATATC	1 cut(s)	1618
EcoT14I	CCWWGG	1 cut(s)	1634
EcoT22I	ATGCAT	5 cut(s)	577, 946, 957, 1657, 1987
ErhI	CCWWGG	1 cut(s)	1634
FalI	AAGNNNNNCTT	8 cut(s)	884, 916, 1212, 1244, 1764, 1796, 1779, 1811
FaqI	GGGAC	1 cut(s)	1568
FauI	CCCGC	1 cut(s)	1907
FbaI	TGATCA	4 cut(s)	460, 1069, 1515, 1522
FblI	GTMKAC	1 cut(s)	1488
Fnu4HI	GCNGC	5 cut(s)	108, 252, 255, 684, 1604
Fsp4HI	GCNGC	5 cut(s)	108, 252, 255, 684, 1604
FspBI	CTAG	8 cut(s)	111, 143, 227, 237, 354, 753, 981, 1308
GluI	GCNGC	5 cut(s)	108, 252, 255, 684, 1604
GsuI	CTGGAG	1 cut(s)	2256
HaeIII	GGCC	4 cut(s)	18, 647, 1016, 1633
HapII	CCGG	4 cut(s)	82, 431, 2150, 2245
HgaI	GACGC	1 cut(s)	822
Hin1I	GRCGYC	1 cut(s)	1485
HincII	GTYRAC	2 cut(s)	621, 1489
HindII	GTYRAC	2 cut(s)	621, 1489
HpaI	GTTAAC	1 cut(s)	621
HpaII	CCGG	4 cut(s)	82, 431, 2150, 2245
HphI	GGTGA	3 cut(s)	404, 1274, 1762
Hpy166II	GTNNAC	6 cut(s)	602, 621, 1183, 1371, 1489, 2036
Hpy8I	GTNNAC	6 cut(s)	602, 621, 1183, 1371, 1489, 2036
Hpy99I	CGWCG	1 cut(s)	1490
HpyAV	CCTTC	6 cut(s)	278, 380, 1170, 1741, 1999, 2048
HpyCH4III	ACNGT	6 cut(s)	606, 1061, 1357, 1397, 1742, 2218
HpyCH4IV	ACGT	1 cut(s)	1485
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 572, 1013, 1121, 1630
HpyF3I	CTNAG	8 cut(s)	304, 453, 526, 1035, 1089, 1411, 1878, 2172
HpySE526I	ACGT	1 cut(s)	1485
Hsp92I	GRCGYC	1 cut(s)	1485
KpnI	GGTACC	1 cut(s)	1642
Ksp22I	TGATCA	4 cut(s)	460, 1069, 1515, 1522
KspAI	GTTAAC	1 cut(s)	621
LmnI	GCTCC	5 cut(s)	193, 610, 1380, 2014, 2275
Lsp1109I	GCAGC	3 cut(s)	241, 670, 1615
MabI	ACCWGGT	1 cut(s)	1258
MaeI	CTAG	8 cut(s)	111, 143, 227, 237, 354, 753, 981, 1308
MaeII	ACGT	1 cut(s)	1485
MaeIII	GTNAC	5 cut(s)	293, 392, 1262, 1310, 1974
MflI	RGATCY	4 cut(s)	985, 1610, 2112, 2195
MhlI	GDGCHC	5 cut(s)	604, 615, 2038, 2092, 2223
MlsI	TGGCCA	2 cut(s)	647, 1016
MluNI	TGGCCA	2 cut(s)	647, 1016
MlyI	GAGTC	6 cut(s)	290, 296, 470, 494, 518, 920
MmeI	TCCRAC	2 cut(s)	588, 771
Mox20I	TGGCCA	2 cut(s)	647, 1016
Mph1103I	ATGCAT	5 cut(s)	577, 946, 957, 1657, 1987
MroXI	GAANNNNTTC	3 cut(s)	553, 1224, 1950
MscI	TGGCCA	2 cut(s)	647, 1016
MseI	TTAA	8 cut(s)	620, 741, 1137, 1176, 1583, 1719, 2132, 2181
MslI	CAYNNNNRTG	3 cut(s)	580, 1530, 2007
Msp20I	TGGCCA	2 cut(s)	647, 1016
MspA1I	CMGCKG	1 cut(s)	1819
MspI	CCGG	4 cut(s)	82, 431, 2150, 2245
MspR9I	CCNGG	6 cut(s)	27, 83, 512, 545, 1260, 1643
Mva1269I	GAATGC	1 cut(s)	1987
MvaI	CCWGG	5 cut(s)	27, 512, 545, 1260, 1643
MvnI	CGCG	1 cut(s)	489
MwoI	GCNNNNNNNGC	5 cut(s)	251, 572, 1013, 1121, 1630
NciI	CCSGG	1 cut(s)	83
NcoI	CCATGG	1 cut(s)	1634
NheI	GCTAGC	1 cut(s)	110
NlaIV	GGNNCC	3 cut(s)	195, 1640, 2197
NmuCI	GTSAC	5 cut(s)	293, 392, 1262, 1310, 1974
NsiI	ATGCAT	5 cut(s)	577, 946, 957, 1657, 1987
NspI	RCATGY	2 cut(s)	1655, 2214
PaeI	GCATGC	1 cut(s)	2214
PagI	TCATGA	1 cut(s)	2002
PctI	GAATGC	1 cut(s)	1987
PdmI	GAANNNNTTC	3 cut(s)	553, 1224, 1950
PfeI	GAWTC	4 cut(s)	152, 347, 549, 749
PflMI	CCANNNNNTGG	1 cut(s)	2206
PkrI	GCNGC	5 cut(s)	109, 253, 256, 685, 1605
PleI	GAGTC	6 cut(s)	290, 296, 470, 494, 518, 920
PpsI	GAGTC	6 cut(s)	290, 296, 470, 494, 518, 920
PpuMI	RGGWCCY	1 cut(s)	541
PsiI	TTATAA	2 cut(s)	189, 1538
Psp5II	RGGWCCY	1 cut(s)	541
Psp6I	CCWGG	5 cut(s)	25, 510, 543, 1258, 1641
PspEI	GGTNACC	1 cut(s)	1262
PspGI	CCWGG	5 cut(s)	25, 510, 543, 1258, 1641
PspN4I	GGNNCC	3 cut(s)	195, 1640, 2197
PspPI	GGNCC	3 cut(s)	541, 1183, 1192
PspPPI	RGGWCCY	1 cut(s)	541
PstNI	CAGNNNCTG	1 cut(s)	544
PsuI	RGATCY	4 cut(s)	985, 1610, 2112, 2195
RsaI	GTAC	5 cut(s)	1323, 1394, 1640, 1794, 1803
RsaNI	GTAC	5 cut(s)	1322, 1393, 1639, 1793, 1802
RseI	CAYNNNNRTG	3 cut(s)	580, 1530, 2007
SalI	GTCGAC	1 cut(s)	1487
SaqAI	TTAA	8 cut(s)	620, 741, 1137, 1176, 1583, 1719, 2132, 2181
SatI	GCNGC	5 cut(s)	108, 252, 255, 684, 1604
Sau96I	GGNCC	3 cut(s)	541, 1183, 1192
ScaI	AGTACT	1 cut(s)	1323
SchI	GAGTC	6 cut(s)	290, 296, 470, 494, 518, 920
ScrFI	CCNGG	6 cut(s)	27, 83, 512, 545, 1260, 1643
SduI	GDGCHC	5 cut(s)	604, 615, 2038, 2092, 2223
SexAI	ACCWGGT	1 cut(s)	1258
SfcI	CTRYAG	1 cut(s)	1503
SinI	GGWCC	3 cut(s)	541, 1183, 1192
SmiMI	CAYNNNNRTG	3 cut(s)	580, 1530, 2007
SmlI	CTYRAG	3 cut(s)	586, 928, 2249
SmoI	CTYRAG	3 cut(s)	586, 928, 2249
SphI	GCATGC	1 cut(s)	2214
SsiI	CCGC	7 cut(s)	107, 251, 487, 1819, 1914, 2012, 2062
SspI	AATATT	1 cut(s)	1846
SspMI	CTAG	8 cut(s)	111, 143, 227, 237, 354, 753, 981, 1308
StyD4I	CCNGG	6 cut(s)	25, 81, 510, 543, 1258, 1641
StyI	CCWWGG	1 cut(s)	1634
TaaI	ACNGT	6 cut(s)	606, 1061, 1357, 1397, 1742, 2218
TaiI	ACGT	1 cut(s)	1488
TaqI	TCGA	3 cut(s)	1488, 1954, 2294
TaqII	GACCGA	1 cut(s)	1209
TatI	WGTACW	2 cut(s)	1321, 1392
TauI	GCSGC	2 cut(s)	110, 254
TfiI	GAWTC	4 cut(s)	152, 347, 549, 749
Tru1I	TTAA	8 cut(s)	620, 741, 1137, 1176, 1583, 1719, 2132, 2181
Tru9I	TTAA	8 cut(s)	620, 741, 1137, 1176, 1583, 1719, 2132, 2181
TscAI	CASTG	4 cut(s)	791, 1336, 1402, 1733
TseFI	GTSAC	5 cut(s)	293, 392, 1262, 1310, 1974
TseI	GCWGC	3 cut(s)	254, 683, 1603
Tsp45I	GTSAC	5 cut(s)	293, 392, 1262, 1310, 1974
TspGWI	ACGGA	3 cut(s)	354, 1055, 2105
TspRI	CASTG	4 cut(s)	791, 1336, 1402, 1733
Van91I	CCANNNNNTGG	1 cut(s)	2206
VneI	GTGCAC	2 cut(s)	600, 2034
VpaK11BI	GGWCC	3 cut(s)	541, 1183, 1192
XapI	RAATTY	5 cut(s)	401, 2121, 2128, 2162, 2302
XceI	RCATGY	2 cut(s)	1655, 2214
XmiI	GTMKAC	1 cut(s)	1488
XmnI	GAANNNNTTC	3 cut(s)	553, 1224, 1950
XspI	CTAG	8 cut(s)	111, 143, 227, 237, 354, 753, 981, 1308
ZraI	GACGTC	1 cut(s)	1486
ZrmI	AGTACT	1 cut(s)	1323
Zsp2I	ATGCAT	5 cut(s)	577, 946, 957, 1657, 1987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.