Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0005811

Physical Location & Seq

Genomic Coordinates Reverse (-)

21385027 .. 21400705

Gene Structure 15679 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG100300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGGGAAGCAATCAGGCCAGAACCCAGGATGGAGAAAACGCAAAATGCCCAACAAGTTCCAGAAAGGTGGGAAAAGTCGTCGGGTTGAAGAAGAAAAGTTTGCGGCGGCTAGCCCCTCATCTACTTCATCAGGGGAACTGCTAGAGGAAGAATCCAATGGTGTGGCTTCCGAAGAAGAAATAGTTTATAAAGAGCCATCAATGTATGACAAATTGTTGATGGCGCTAGGGTCATCTAGTAAAGCTGTTGCAGCTGCCTATAAGCAGAGAAAAAGACAAGAAGAAGGTAAAAGTGACTCAGACTCAGAAGAGGAGGAGGAGGAGGAGGAGGATGACGACGACGACAGAACTGAATCTTCTAGTGACTTGGAAGAAGTAGATGATGGTCAAGAAGGAGGTGACGATAAATTTCCAATGAAAGGAAAACTGAAAGATCCTGCAAGTGAAGATGCAAAAACTGAGGATGATCAGGACACCTCTGACATGGATGACCGCGAGACCTCTGACTCAGATGACCGCAAGACCTCTGACTCGGATGACCGCAAGACCTCTGACTCGGATGACCAGGGGATGTCCGACTCAGATGCAGAACAGGACCTGGGAATCCATTCTCAATCTGCTATTGATGCATCAATATGCTTGAGTTCCTTTGGTGTACAATTGGAGCACAAGTTAACAGAAGCAGAGGTTGAAAATCTGGCAAAAAAGAAATGGAGATATAAATGGGATGTGCCTGCTGCTGGAATGTCAAAGGGCAAATGGGCAGGAACGGGAGAGTGTTGCATAAAAGATGTTAATCCCAATTCTAGTTATGATCTGAAGCAAAAGTTGTATAAGCACTGGTTGGATGTATATAACACATCTGGACGCAAGGATTTTCATTCATCCAGACAAAGATTGTTCTTCTCCCTCTTCAATAGTTATCGGGATATACTGCATTGCAACAAGAAACCCTTTTATCATAGAGGATCAGAAGAAGACTCAAGTGTCATGGATGCATATATTATGCATTGTCTGAACCATGTCTTCAGAACTAGAGATCTTGTAATGAAGAATGATGCAAAAGTGGCCAAGCATCAGGAAAATGCTAAGAATGTAATTCTTACTGATGATAGTCTCCGTGATCATGGCTTTACTCGTCCTAAGGTGTTGATCCTACTGCCAATGGCGAGCATTGCACTTCGTGTTGTTAAGAGGATAATACAACTTACCCCTTCAGCTCACAAGGTTAATGTGGACCACATGGACCGATTTTCTAAAGAGTTCGGAAGTGAAGAGGTTCTTGACAATGAGGACGAAAGAGATATACCACCAGGTGACCAGAACTCTGGAAATGTAATACCTCACAAGTCATCGAAACCTAGTGACTTCCAAGTACTTTTTGGTGGCAATAGCAAGGATGATTTCATGGTTGGCATCAAGTTCACGAAGAGGAGCATAAAGTTGTACAGTGATTTTTATTCCTCAGATATCATAGTTGCTTCTGCTGTTGGTTTGTTGAAAAAAATTGATGAGGCTAAAATAAATAAGGAAAAGGATGTCGACTATCTTTCTTCTATAGAGGTTCTGATCATTGATCATGCAGATGTTATAACAATGCAGAACTGGGACTTTTTGAAGTCAGTTGTTGAGCAGTTAAACCATCAACCATCTAAGCAGCATGGAACTGATATCATGCGTATAAGGCCATGGTACCTGGATGGACATGCATCTTTTTATAGGCAAACTATACTTTTGAGTTATTATTCAAACCCAGATATAAACAATTTGTTTAACAAGAACTGCACAAATTACCATGGGAAGGTGAAGTTGGTGCATGAGTATAAAGGAGTTCTTCCTAAAGTGGTACTTCAAGTTCGCCAGATTTTTCAGCGGTTTGAGGGAGATGAAATAGTGAATATTGATGATGCTCGTTTTGAACATTTTGCTACTAAGGTCTTCCCCAAGATAAAAAACTCTGTTGAGGGCGGGATTATGATATTTATCAGCTCTTACTTTGAATATGTTCAAGTTCGTAATTTTTTGAAGTCACAGAATGCATCCTTCTGTCTGCTTCATGAATATGCGGAGCAAAAAGATATTTCCCGTGCACGGGTTTGGTTCTTTGAAGGAAAGCGGAAGATCATGCTCTACACAGAGAGAGCACATTTTTACCACAGATATAAGATCCGCGGAATTCAGAATTTAATCGTCTATTCATTGCCAGAGAGAAAGGAATTTTACCCTGAGGTTGTTAATATGGTTGATGGATCCCATGACATGGCATGCACGGTGCTCTTTTCTCCTTTTGATCTCCTCCGGCTTGAGAGAATTGTGGGAACTGCTCCAGCAAAGAGAATGGTGTCATCGAAAATGAATTTATTTTCTTTCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0019843 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UTP25

Protein Analysis

791

Amino Acids

90.62

Weight (kDa)

5.68

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UTP25_NTPase-like	PF22916	308 - 602	8.3e-107	UTP25, NTP hydrolase-like domain
Utp25_C	PF06862	613 - 790	3.3e-62	Utp25, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17690
fragaria_vesca	FvH4_4g07640 FvH4_4g07640 FvH4_4g07640 FvH4_4g07640
malus_domestica	MD03G1036400.v1.1 MD13G1251100.v1.1 MD13G1251200.v1.1
prunus_persica	Prupe.1G079600_v2.0.a1 Prupe.1G079600_v2.0.a1
pyrus_communis	pycom03g02780 pycom13g21610 pycom13g22640 pycom13g22650
rosa_chinensis	RchiOBHm_Chr4g0400251
rosa_laevigata	RLG00000009200
rosa_multiflora	Rmu_co7994400.1_g000001 Rmu_sc0003908.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345230
rosa_rugosa	Rorug04G0024200 Rorug04G0024300 Rorug04G0024400
rosa_samantha	Rh4AG099900 Rh4AG100300 Rh4BG097500 Rh4CG109100 Rh4DG094400
rosa_wichuraiana	Rw4G008260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	189, 1592
AasI	GACNNNNNNGTC	1 cut(s)	986
Acc65I	GGTACC	1 cut(s)	1692
AccB1I	GGYRCC	1 cut(s)	1692
AccB7I	CCANNNNNTGG	1 cut(s)	2260
AccI	GTMKAC	1 cut(s)	1542
AccII	CGCG	2 cut(s)	495, 2172
AclWI	GGATC	6 cut(s)	428, 976, 1147, 2161, 2244, 2257
AcoI	YGGCCR	1 cut(s)	1068
AcsI	RAATTY	5 cut(s)	407, 2175, 2182, 2216, 2356
AcuI	CTGAAG	3 cut(s)	839, 1012, 1200
AdeI	CACNNNGTG	2 cut(s)	1184, 1316
AfaI	GTAC	5 cut(s)	657, 1377, 1448, 1694, 1848
AfiI	CCNNNNNNNGG	6 cut(s)	419, 740, 1801, 2091, 2092, 2260
AjnI	CCWGG	5 cut(s)	25, 564, 597, 1312, 1695
AjuI	GAANNNNNNNTTGG	2 cut(s)	1793, 1825
AluBI	AGCT	4 cut(s)	245, 254, 1220, 1989
AluI	AGCT	4 cut(s)	245, 254, 1220, 1989
Alw21I	GWGCWC	4 cut(s)	669, 2092, 2146, 2277
Alw26I	GTCTC	2 cut(s)	491, 1121
Alw44I	GTGCAC	1 cut(s)	2088
AlwI	GGATC	6 cut(s)	428, 976, 1147, 2161, 2244, 2257
AlwNI	CAGNNNCTG	1 cut(s)	598
AoxI	GGCC	3 cut(s)	16, 1068, 1685
ApaLI	GTGCAC	1 cut(s)	2088
ApeKI	GCWGC	4 cut(s)	251, 254, 737, 1657
ApoI	RAATTY	5 cut(s)	407, 2175, 2182, 2216, 2356
Asp700I	GAANNNNTTC	3 cut(s)	607, 1278, 2004
Asp718I	GGTACC	1 cut(s)	1692
AspLEI	GCGC	1 cut(s)	226
AspS9I	GGNCC	3 cut(s)	595, 1237, 1246
AsuHPI	GGTGA	3 cut(s)	410, 1328, 1816
AsuNHI	GCTAGC	1 cut(s)	110
AvaII	GGWCC	3 cut(s)	595, 1237, 1246
AxyI	CCTNAGG	2 cut(s)	1143, 2226
BaeGI	GKGCMC	1 cut(s)	2092
BalI	TGGCCA	1 cut(s)	1070
BamHI	GGATCC	1 cut(s)	2249
BanI	GGYRCC	1 cut(s)	1692
BbsI	GAAGAC	3 cut(s)	984, 1018, 1930
Bbv12I	GWGCWC	4 cut(s)	669, 2092, 2146, 2277
BbvI	GCAGC	4 cut(s)	241, 263, 724, 1669
BccI	CCATC	8 cut(s)	24, 205, 214, 377, 1650, 1657, 1694, 2240
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	5 cut(s)	27, 566, 599, 1314, 1697
BclI	TGATCA	4 cut(s)	466, 1123, 1569, 1576
BcoDI	GTCTC	2 cut(s)	491, 1121
BfaI	CTAG	8 cut(s)	111, 143, 227, 237, 360, 807, 1035, 1362
BfmI	CTRYAG	1 cut(s)	1557
BfoI	RGCGCY	1 cut(s)	227
BglII	AGATCT	1 cut(s)	1039
BisI	GCNGC	6 cut(s)	105, 108, 252, 255, 738, 1658
BlsI	GCNGC	6 cut(s)	106, 109, 253, 256, 739, 1659
BmcAI	AGTACT	1 cut(s)	1377
Bme1390I	CCNGG	5 cut(s)	27, 566, 599, 1314, 1697
Bme18I	GGWCC	3 cut(s)	595, 1237, 1246
BmgT120I	GGNCC	3 cut(s)	595, 1237, 1246
BmiI	GGNNCC	2 cut(s)	1694, 2251
BmrFI	CCNGG	5 cut(s)	27, 566, 599, 1314, 1697
BmrI	ACTGGG	1 cut(s)	1615
BmtI	GCTAGC	1 cut(s)	114
BmuI	ACTGGG	1 cut(s)	1615
BpiI	GAAGAC	3 cut(s)	984, 1018, 1930
BpmI	CTGGAG	1 cut(s)	2310
BpuEI	CTTGAG	3 cut(s)	661, 967, 2324
BsaBI	GATNNNNATC	2 cut(s)	795, 1982
BsaI	GGTCTC	1 cut(s)	491
BsaJI	CCNNGG	6 cut(s)	25, 565, 598, 1688, 1795, 2170
BsaXI	ACNNNNNCTCC	2 cut(s)	656, 686
Bsc4I	CCNNNNNNNGG	6 cut(s)	419, 740, 1801, 2091, 2092, 2260
Bse1I	ACTGG	2 cut(s)	845, 1610
Bse21I	CCTNAGG	2 cut(s)	1143, 2226
Bse3DI	GCAATG	3 cut(s)	937, 1173, 2198
Bse8I	GATNNNNATC	2 cut(s)	795, 1982
BseBI	CCWGG	5 cut(s)	27, 566, 599, 1314, 1697
BseDI	CCNNGG	6 cut(s)	25, 565, 598, 1688, 1795, 2170
BseJI	GATNNNNATC	2 cut(s)	795, 1982
BseLI	CCNNNNNNNGG	6 cut(s)	419, 740, 1801, 2091, 2092, 2260
BseMI	GCAATG	3 cut(s)	937, 1173, 2198
BseMII	CTCAG	7 cut(s)	312, 318, 450, 522, 594, 1479, 2217
BseNI	ACTGG	2 cut(s)	845, 1610
BseRI	GAGGAG	8 cut(s)	326, 329, 332, 335, 338, 341, 1447, 2285
BseSI	GKGCMC	1 cut(s)	2092
BseXI	GCAGC	4 cut(s)	241, 263, 724, 1669
BsgI	GTGCAG	1 cut(s)	1768
Bsh1236I	CGCG	2 cut(s)	495, 2172
BshFI	GGCC	3 cut(s)	18, 1070, 1687
BshNI	GGYRCC	1 cut(s)	1692
BsiHKAI	GWGCWC	4 cut(s)	669, 2092, 2146, 2277
BsiSI	CCGG	1 cut(s)	2299
BslFI	GGGAC	1 cut(s)	1622
BslI	CCNNNNNNNGG	6 cut(s)	419, 740, 1801, 2091, 2092, 2260
BsmAI	GTCTC	2 cut(s)	491, 1121
BsmFI	GGGAC	1 cut(s)	1622
BsmI	GAATGC	1 cut(s)	2041
BsnI	GGCC	3 cut(s)	18, 1070, 1687
Bso31I	GGTCTC	1 cut(s)	491
Bsp1286I	GDGCHC	4 cut(s)	669, 2092, 2146, 2277
Bsp1407I	TGTACA	2 cut(s)	655, 1446
Bsp19I	CCATGG	2 cut(s)	1688, 1795
BspANI	GGCC	3 cut(s)	18, 1070, 1687
BspCNI	CTCAG	7 cut(s)	311, 317, 451, 521, 593, 1478, 2218
BspFNI	CGCG	2 cut(s)	495, 2172
BspHI	TCATGA	1 cut(s)	2056
BspLI	GGNNCC	2 cut(s)	1694, 2251
BspOI	GCTAGC	1 cut(s)	114
BspPI	GGATC	6 cut(s)	428, 976, 1147, 2161, 2244, 2257
BspT107I	GGYRCC	1 cut(s)	1692
BspTNI	GGTCTC	1 cut(s)	491
BsrDI	GCAATG	3 cut(s)	937, 1173, 2198
BsrGI	TGTACA	2 cut(s)	655, 1446
BsrI	ACTGG	2 cut(s)	845, 1610
BssECI	CCNNGG	6 cut(s)	25, 565, 598, 1688, 1795, 2170
BssT1I	CCWWGG	2 cut(s)	1688, 1795
Bst2UI	CCWGG	5 cut(s)	27, 566, 599, 1314, 1697
Bst4CI	ACNGT	2 cut(s)	1451, 2272
Bst6I	CTCTTC	4 cut(s)	303, 917, 1269, 1424
BstAUI	TGTACA	2 cut(s)	655, 1446
BstC8I	GCNNGC	4 cut(s)	112, 735, 1171, 2266
BstDSI	CCRYGG	3 cut(s)	1688, 1795, 2170
BstEII	GGTNACC	1 cut(s)	1316
BstFNI	CGCG	2 cut(s)	495, 2172
BstH2I	RGCGCY	1 cut(s)	227
BstHHI	GCGC	1 cut(s)	226
BstMAI	GTCTC	2 cut(s)	491, 1121
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 626, 1067, 1175, 1684
BstNI	CCWGG	5 cut(s)	27, 566, 599, 1314, 1697
BstNSI	RCATGY	2 cut(s)	1709, 2268
BstPI	GGTNACC	1 cut(s)	1316
BstSCI	CCNGG	5 cut(s)	25, 564, 597, 1312, 1695
BstSFI	CTRYAG	1 cut(s)	1557
BstSLI	GKGCMC	1 cut(s)	2092
BstUI	CGCG	2 cut(s)	495, 2172
BstV1I	GCAGC	4 cut(s)	241, 263, 724, 1669
BstV2I	GAAGAC	3 cut(s)	984, 1018, 1930
BstX2I	RGATCY	4 cut(s)	433, 1039, 2166, 2249
BstXI	CCANNNNNNTGG	3 cut(s)	68, 163, 1328
BstYI	RGATCY	4 cut(s)	433, 1039, 2166, 2249
Bsu36I	CCTNAGG	2 cut(s)	1143, 2226
BsuRI	GGCC	3 cut(s)	18, 1070, 1687
BtgI	CCRYGG	3 cut(s)	1688, 1795, 2170
BtsIMutI	CAGTG	2 cut(s)	838, 1456
Cac8I	GCNNGC	4 cut(s)	112, 735, 1171, 2266
CaiI	CAGNNNCTG	1 cut(s)	598
CciI	TCATGA	1 cut(s)	2056
CfoI	GCGC	1 cut(s)	226
Cfr13I	GGNCC	3 cut(s)	595, 1237, 1246
Cfr42I	CCGCGG	1 cut(s)	2173
CseI	GACGC	1 cut(s)	876
CsiI	ACCWGGT	1 cut(s)	1312
Csp6I	GTAC	5 cut(s)	656, 1376, 1447, 1693, 1847
CviQI	GTAC	5 cut(s)	656, 1376, 1447, 1693, 1847
DraIII	CACNNNGTG	2 cut(s)	1184, 1316
DrdI	GACNNNNNNGTC	1 cut(s)	986
DseDI	GACNNNNNNGTC	1 cut(s)	986
EaeI	YGGCCR	1 cut(s)	1068
Eam1104I	CTCTTC	4 cut(s)	303, 917, 1269, 1424
EarI	CTCTTC	4 cut(s)	303, 917, 1269, 1424
Eco130I	CCWWGG	2 cut(s)	1688, 1795
Eco31I	GGTCTC	1 cut(s)	491
Eco32I	GATATC	2 cut(s)	1471, 1672
Eco47I	GGWCC	3 cut(s)	595, 1237, 1246
Eco57I	CTGAAG	3 cut(s)	839, 1012, 1200
Eco81I	CCTNAGG	2 cut(s)	1143, 2226
Eco91I	GGTNACC	1 cut(s)	1316
EcoO109I	RGGNCCY	1 cut(s)	595
EcoO65I	GGTNACC	1 cut(s)	1316
EcoRI	GAATTC	1 cut(s)	2175
EcoRII	CCWGG	5 cut(s)	25, 564, 597, 1312, 1695
EcoRV	GATATC	2 cut(s)	1471, 1672
EcoT14I	CCWWGG	2 cut(s)	1688, 1795
EcoT22I	ATGCAT	5 cut(s)	631, 1000, 1011, 1711, 2041
ErhI	CCWWGG	2 cut(s)	1688, 1795
FalI	AAGNNNNNCTT	8 cut(s)	938, 970, 1266, 1298, 1818, 1850, 1833, 1865
FaqI	GGGAC	1 cut(s)	1622
FauI	CCCGC	1 cut(s)	1961
FbaI	TGATCA	4 cut(s)	466, 1123, 1569, 1576
FblI	GTMKAC	1 cut(s)	1542
Fnu4HI	GCNGC	6 cut(s)	105, 108, 252, 255, 738, 1658
Fsp4HI	GCNGC	6 cut(s)	105, 108, 252, 255, 738, 1658
FspBI	CTAG	8 cut(s)	111, 143, 227, 237, 360, 807, 1035, 1362
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	6 cut(s)	105, 108, 252, 255, 738, 1658
GsuI	CTGGAG	1 cut(s)	2310
HaeII	RGCGCY	1 cut(s)	227
HaeIII	GGCC	3 cut(s)	18, 1070, 1687
HapII	CCGG	1 cut(s)	2299
HgaI	GACGC	1 cut(s)	876
HhaI	GCGC	1 cut(s)	226
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HincII	GTYRAC	2 cut(s)	675, 1543
HindII	GTYRAC	2 cut(s)	675, 1543
HpaI	GTTAAC	1 cut(s)	675
HpaII	CCGG	1 cut(s)	2299
HphI	GGTGA	3 cut(s)	410, 1328, 1816
Hpy166II	GTNNAC	6 cut(s)	656, 675, 1237, 1425, 1543, 2090
Hpy8I	GTNNAC	6 cut(s)	656, 675, 1237, 1425, 1543, 2090
Hpy99I	CGWCG	3 cut(s)	84, 341, 344
HpyAV	CCTTC	6 cut(s)	278, 386, 1224, 1795, 2053, 2102
HpyCH4III	ACNGT	2 cut(s)	1451, 2272
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 626, 1067, 1175, 1684
HspAI	GCGC	1 cut(s)	224
KpnI	GGTACC	1 cut(s)	1696
Ksp22I	TGATCA	4 cut(s)	466, 1123, 1569, 1576
KspAI	GTTAAC	1 cut(s)	675
KspI	CCGCGG	1 cut(s)	2173
LmnI	GCTCC	4 cut(s)	664, 1434, 2068, 2329
Lsp1109I	GCAGC	4 cut(s)	241, 263, 724, 1669
MabI	ACCWGGT	1 cut(s)	1312
MaeI	CTAG	8 cut(s)	111, 143, 227, 237, 360, 807, 1035, 1362
MaeIII	GTNAC	6 cut(s)	293, 362, 398, 1316, 1364, 2028
MfeI	CAATTG	1 cut(s)	659
MflI	RGATCY	4 cut(s)	433, 1039, 2166, 2249
MhlI	GDGCHC	4 cut(s)	669, 2092, 2146, 2277
MlsI	TGGCCA	1 cut(s)	1070
MluNI	TGGCCA	1 cut(s)	1070
MlyI	GAGTC	7 cut(s)	290, 296, 500, 524, 548, 572, 974
MmeI	TCCRAC	2 cut(s)	600, 825
Mox20I	TGGCCA	1 cut(s)	1070
Mph1103I	ATGCAT	5 cut(s)	631, 1000, 1011, 1711, 2041
MroXI	GAANNNNTTC	3 cut(s)	607, 1278, 2004
MscI	TGGCCA	1 cut(s)	1070
MseI	TTAA	8 cut(s)	674, 795, 1191, 1230, 1637, 1773, 2186, 2235
MslI	CAYNNNNRTG	3 cut(s)	634, 1584, 2061
Msp20I	TGGCCA	1 cut(s)	1070
MspA1I	CMGCKG	3 cut(s)	254, 1873, 2172
MspI	CCGG	1 cut(s)	2299
MspR9I	CCNGG	5 cut(s)	27, 566, 599, 1314, 1697
MunI	CAATTG	1 cut(s)	659
Mva1269I	GAATGC	1 cut(s)	2041
MvaI	CCWGG	5 cut(s)	27, 566, 599, 1314, 1697
MvnI	CGCG	2 cut(s)	495, 2172
MwoI	GCNNNNNNNGC	5 cut(s)	251, 626, 1067, 1175, 1684
NcoI	CCATGG	2 cut(s)	1688, 1795
NheI	GCTAGC	1 cut(s)	110
NlaIV	GGNNCC	2 cut(s)	1694, 2251
NmuCI	GTSAC	6 cut(s)	293, 362, 398, 1316, 1364, 2028
NsiI	ATGCAT	5 cut(s)	631, 1000, 1011, 1711, 2041
NspI	RCATGY	2 cut(s)	1709, 2268
PaeI	GCATGC	1 cut(s)	2268
PagI	TCATGA	1 cut(s)	2056
PctI	GAATGC	1 cut(s)	2041
PdmI	GAANNNNTTC	3 cut(s)	607, 1278, 2004
PfeI	GAWTC	3 cut(s)	152, 353, 603
PflMI	CCANNNNNTGG	1 cut(s)	2260
PkrI	GCNGC	6 cut(s)	106, 109, 253, 256, 739, 1659
PleI	GAGTC	7 cut(s)	290, 296, 500, 524, 548, 572, 974
PpsI	GAGTC	7 cut(s)	290, 296, 500, 524, 548, 572, 974
PpuMI	RGGWCCY	1 cut(s)	595
PsiI	TTATAA	2 cut(s)	189, 1592
Psp5II	RGGWCCY	1 cut(s)	595
Psp6I	CCWGG	5 cut(s)	25, 564, 597, 1312, 1695
PspEI	GGTNACC	1 cut(s)	1316
PspGI	CCWGG	5 cut(s)	25, 564, 597, 1312, 1695
PspN4I	GGNNCC	2 cut(s)	1694, 2251
PspPI	GGNCC	3 cut(s)	595, 1237, 1246
PspPPI	RGGWCCY	1 cut(s)	595
PsrI	GAACNNNNNNTAC	2 cut(s)	1839, 1871
PstNI	CAGNNNCTG	1 cut(s)	598
PsuI	RGATCY	4 cut(s)	433, 1039, 2166, 2249
PvuII	CAGCTG	1 cut(s)	254
RsaI	GTAC	5 cut(s)	657, 1377, 1448, 1694, 1848
RsaNI	GTAC	5 cut(s)	656, 1376, 1447, 1693, 1847
RseI	CAYNNNNRTG	3 cut(s)	634, 1584, 2061
SacII	CCGCGG	1 cut(s)	2173
SalI	GTCGAC	1 cut(s)	1541
SaqAI	TTAA	8 cut(s)	674, 795, 1191, 1230, 1637, 1773, 2186, 2235
SatI	GCNGC	6 cut(s)	105, 108, 252, 255, 738, 1658
Sau96I	GGNCC	3 cut(s)	595, 1237, 1246
ScaI	AGTACT	1 cut(s)	1377
SchI	GAGTC	7 cut(s)	290, 296, 500, 524, 548, 572, 974
ScrFI	CCNGG	5 cut(s)	27, 566, 599, 1314, 1697
SduI	GDGCHC	4 cut(s)	669, 2092, 2146, 2277
SexAI	ACCWGGT	1 cut(s)	1312
SfcI	CTRYAG	1 cut(s)	1557
Sfr303I	CCGCGG	1 cut(s)	2173
SgrBI	CCGCGG	1 cut(s)	2173
SinI	GGWCC	3 cut(s)	595, 1237, 1246
SmiMI	CAYNNNNRTG	3 cut(s)	634, 1584, 2061
SmlI	CTYRAG	3 cut(s)	640, 982, 2303
SmoI	CTYRAG	3 cut(s)	640, 982, 2303
SphI	GCATGC	1 cut(s)	2268
SspI	AATATT	1 cut(s)	1900
SspMI	CTAG	8 cut(s)	111, 143, 227, 237, 360, 807, 1035, 1362
StyD4I	CCNGG	5 cut(s)	25, 564, 597, 1312, 1695
StyI	CCWWGG	2 cut(s)	1688, 1795
TaaI	ACNGT	2 cut(s)	1451, 2272
TaqI	TCGA	3 cut(s)	1355, 1542, 2348
TaqII	GACCGA	1 cut(s)	1263
TatI	WGTACW	3 cut(s)	655, 1375, 1446
TauI	GCSGC	2 cut(s)	107, 110
TfiI	GAWTC	3 cut(s)	152, 353, 603
Tru1I	TTAA	8 cut(s)	674, 795, 1191, 1230, 1637, 1773, 2186, 2235
Tru9I	TTAA	8 cut(s)	674, 795, 1191, 1230, 1637, 1773, 2186, 2235
TscAI	CASTG	2 cut(s)	845, 1456
TseFI	GTSAC	6 cut(s)	293, 362, 398, 1316, 1364, 2028
TseI	GCWGC	4 cut(s)	251, 254, 737, 1657
Tsp45I	GTSAC	6 cut(s)	293, 362, 398, 1316, 1364, 2028
TspGWI	ACGGA	1 cut(s)	1109
TspRI	CASTG	2 cut(s)	845, 1456
Van91I	CCANNNNNTGG	1 cut(s)	2260
VneI	GTGCAC	1 cut(s)	2088
VpaK11BI	GGWCC	3 cut(s)	595, 1237, 1246
XapI	RAATTY	5 cut(s)	407, 2175, 2182, 2216, 2356
XceI	RCATGY	2 cut(s)	1709, 2268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1379
XmiI	GTMKAC	1 cut(s)	1542
XmnI	GAANNNNTTC	3 cut(s)	607, 1278, 2004
XspI	CTAG	8 cut(s)	111, 143, 227, 237, 360, 807, 1035, 1362
ZrmI	AGTACT	1 cut(s)	1377
Zsp2I	ATGCAT	5 cut(s)	631, 1000, 1011, 1711, 2041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.