Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0005811

Physical Location & Seq

Genomic Coordinates Reverse (-)

16613446 .. 16627945

Gene Structure 14500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG097500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGGGAAGCAATCAGGCCAGAACCCAGGATGGAGGAAACGCAAAATGCCCAACAAGTTCCAGAAAGGTGGGAAAAGTCGTCGGGTTGAAGAAGAAAAGGTTGCGGCGGCTAGCCCCTCATCTACTTCATCAGGGGAACTGCCAGAGGAAGAATCCAATGGTGTGGCTTCCGAAGAAGAAATAGTTTATAAAGAGCCATCAATGTATGACAAATTGTTGATGGCCCTAGGGTCATCTAGTAAAGCTGTTGCAGCTGCCTATAAGCAGAGAAAAAGACAAGAAGAAGGTAAAAGTGACTCGGACTCGGAAGAGGAGGAGGAGGAGGAGGATGATGAGGACGACGACGGAACTGAATCTTCTAGTGACTTGGAAGAAGTAGATGATGGTCAAGAAGGAGGTGACGATAAATTTCCAATGAAAGGAAAACTGAAAGATCCTGCAAGTGAAGATGCAAAAACTGAGGATGATCAGGACACCTCTGACATGGATGACCGCGAGACCTCTGACTCAGATGACTGCGAGACCTCTGACTCGGATGACCAGGGGATGTCCGACTCAGATGCAGAACAGGACCTGGGAATCCATTCTCAATCTGCTATTGATGCATCAATATGCTTGAGTTCCTTTGGTGTACAGTTGGAGCACATGTTAACAGAAGCAGAGTTTGAAAATCTGGCAAAAAAGAAATGGAGATATAAATGGGATGTGCCTGCTGCTGGAATGTCAAAGGGCAAATGGGCAGGAACGGGAGAGTGTTGCATAAAAGATGTTAATCCCGATTCTAGTTATGATCTGAAGCAAAAGTTGTATAAGCACTGGTTGGATGTATATAACACATCTGGACGCAAGGATTTTCATTCATCCAGACAAAGATTGTTCTTCTCCCTCTTCAATAGTTATCGGGATATACTGCATTGCAACAAGAAACCCTTTTATCACAGAGGATCAGAAGAAGACTCAAGTGTCATGGATGCATATATTATGCATTGTCTGAACCATGTCTTCAGAACTAGAGATCTTGTAATGAAGAATGATGCAAAAGTGGCCAAGCATCAGGAAAATGCTAAGAATGTAATTCTTACTGATGATAGTCTCCGTGATCATGGCTTTACTCGTCCTAAGGTGTTGATCCTACTGCCAATGGCGAGCATTGCACTTCGTGTTGTTAAGAGGATAATACAACTTACCCCTTCAGCTCACAAGGTTAATGTGGACCACATGGACCGATTTTCTAAAGAGTTCGGAAGTGAAGAGGTTCTTGACAATGAGGACGAAAGAGATATACCACCAGGTGACCAGAACTCTGGAAATGTAAAACCTCACAAGTCATCGAAACCTAGTGACTTCCAAGTACTTTTTGGTGGCAATAGCAAGGATGATTTCATGGTTGGCATCAAGTTCACGAAGAGGAGCATAAAGTTGTACAGTGATTTTTATTCCTCAGATATGATAGTTGCTTCTGCTGTTGGTTTGTTGAAAAAAATTGATGAGGCTAAAATAAATAAGGAAAAGGATGTCGACTATCTTTCTTCTATAGAGGTTCTGATCATTGATCATGCAGATGTTATAACAATGCAGAACTGGGACTTTTTGAAGTCAGTTGTTGAGCAGTTAAACCATCAACCATCTAAGCAGCATGGAACTGATATCATGCGTATAAGGCCATGGTACCTGGATGGACATGCATCTTTTTATAGGCAAACTATACTTTTGAGTTATTATTCAAACCCAGATATAAACAATTTGTTTAACAAGCACTGCACAAATTACCGTGGGAAGGTGAAGTTGGTGCATGAATATAAAGGAGTTCTTCCTAAAGTGGTACTTCAAGTACGCCAGATTTTTCAGCGGTTTGAGGGAGATGAAATAGTGAATATTGATGATGCTCGTTTTGAACATTTTGCTACTAAGGTCTTCCCCAAGATCAAAAACTCTGTTGAGGGCGGGATTATGATATTCATCAGCTCTTACTTTGAATATGTTCGAGTTCGTAATTTTTTGAAGTCACAGAATGCATCCTTCTGTCTGCTTCATGAATATGCGGAGCAAAAAGATATTTCCCGTGCACGGGTTTGGTTCTTTGAAGGAAAGCGGAAGATCATGCTCTACACAGAGAGAGCACATTTTTACCACAGATATAAGATCCGCGGAATTCAGAATTTAATCGTCTATTCATTGCCGGAGAGAAAGGAATTTTACCCTGAGGTTGTTAATATGGTTGATGGATCCCATGACATGGCATGCACGGTGCTCTTTTCTCCTTTTGATCTCCTCCGGCTTGAGAGAATTGTGGGAACTGCTCCAGCAAAGAGAATGGTGTCATCGAAAATGAATTTATTTTCTTTCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0019843 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UTP25

Protein Analysis

783

Amino Acids

89.65

Weight (kDa)

5.6

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UTP25_NTPase-like	PF22916	300 - 594	7.5e-107	UTP25, NTP hydrolase-like domain
Utp25_C	PF06862	605 - 782	7.3e-63	Utp25, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17690
fragaria_vesca	FvH4_4g07640 FvH4_4g07640 FvH4_4g07640 FvH4_4g07640
malus_domestica	MD03G1036400.v1.1 MD13G1251100.v1.1 MD13G1251200.v1.1
prunus_persica	Prupe.1G079600_v2.0.a1 Prupe.1G079600_v2.0.a1
pyrus_communis	pycom03g02780 pycom13g21610 pycom13g22640 pycom13g22650
rosa_chinensis	RchiOBHm_Chr4g0400251
rosa_laevigata	RLG00000009200
rosa_multiflora	Rmu_co7994400.1_g000001 Rmu_sc0003908.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345230
rosa_rugosa	Rorug04G0024200 Rorug04G0024300 Rorug04G0024400
rosa_samantha	Rh4AG099900 Rh4AG100300 Rh4BG097500 Rh4CG109100 Rh4DG094400
rosa_wichuraiana	Rw4G008260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	189, 1568
AasI	GACNNNNNNGTC	1 cut(s)	962
Acc65I	GGTACC	1 cut(s)	1668
AccB1I	GGYRCC	1 cut(s)	1668
AccB7I	CCANNNNNTGG	1 cut(s)	2236
AccI	GTMKAC	1 cut(s)	1518
AccII	CGCG	2 cut(s)	495, 2148
AciI	CCGC	9 cut(s)	104, 107, 493, 1849, 1944, 2042, 2092, 2146, 2148
AclWI	GGATC	6 cut(s)	428, 952, 1123, 2137, 2220, 2233
AcoI	YGGCCR	1 cut(s)	1044
AcsI	RAATTY	5 cut(s)	407, 2151, 2158, 2192, 2332
AcuI	CTGAAG	3 cut(s)	815, 988, 1176
AdeI	CACNNNGTG	2 cut(s)	1160, 1292
AfaI	GTAC	6 cut(s)	633, 1353, 1424, 1670, 1824, 1833
AfiI	CCNNNNNNNGG	6 cut(s)	419, 716, 1777, 2067, 2068, 2236
AflIII	ACRYGT	1 cut(s)	645
AjnI	CCWGG	5 cut(s)	25, 540, 573, 1288, 1671
AjuI	GAANNNNNNNTTGG	2 cut(s)	1769, 1801
AluBI	AGCT	4 cut(s)	245, 254, 1196, 1965
AluI	AGCT	4 cut(s)	245, 254, 1196, 1965
Alw21I	GWGCWC	4 cut(s)	645, 2068, 2122, 2253
Alw26I	GTCTC	3 cut(s)	491, 515, 1097
Alw44I	GTGCAC	1 cut(s)	2064
AlwI	GGATC	6 cut(s)	428, 952, 1123, 2137, 2220, 2233
AlwNI	CAGNNNCTG	1 cut(s)	574
AoxI	GGCC	4 cut(s)	16, 222, 1044, 1661
ApaLI	GTGCAC	1 cut(s)	2064
ApeKI	GCWGC	4 cut(s)	251, 254, 713, 1633
ApoI	RAATTY	5 cut(s)	407, 2151, 2158, 2192, 2332
Asp700I	GAANNNNTTC	3 cut(s)	583, 1254, 1980
Asp718I	GGTACC	1 cut(s)	1668
AspA2I	CCTAGG	1 cut(s)	226
AspS9I	GGNCC	4 cut(s)	223, 571, 1213, 1222
AsuHPI	GGTGA	3 cut(s)	410, 1304, 1792
AsuNHI	GCTAGC	1 cut(s)	110
AvaII	GGWCC	3 cut(s)	571, 1213, 1222
AvrII	CCTAGG	1 cut(s)	226
AxyI	CCTNAGG	2 cut(s)	1119, 2202
BaeGI	GKGCMC	1 cut(s)	2068
BalI	TGGCCA	1 cut(s)	1046
BamHI	GGATCC	1 cut(s)	2225
BanI	GGYRCC	1 cut(s)	1668
BbsI	GAAGAC	3 cut(s)	960, 994, 1906
Bbv12I	GWGCWC	4 cut(s)	645, 2068, 2122, 2253
BbvI	GCAGC	4 cut(s)	241, 263, 700, 1645
BccI	CCATC	8 cut(s)	24, 205, 214, 377, 1626, 1633, 1670, 2216
BcgI	CGANNNNNNTGC	2 cut(s)	542, 576
BciT130I	CCWGG	5 cut(s)	27, 542, 575, 1290, 1673
BclI	TGATCA	4 cut(s)	466, 1099, 1545, 1552
BcoDI	GTCTC	3 cut(s)	491, 515, 1097
BfaI	CTAG	7 cut(s)	111, 227, 237, 360, 783, 1011, 1338
BfmI	CTRYAG	1 cut(s)	1533
BglII	AGATCT	1 cut(s)	1015
BisI	GCNGC	6 cut(s)	105, 108, 252, 255, 714, 1634
BlnI	CCTAGG	1 cut(s)	226
BlsI	GCNGC	6 cut(s)	106, 109, 253, 256, 715, 1635
BmcAI	AGTACT	1 cut(s)	1353
Bme1390I	CCNGG	5 cut(s)	27, 542, 575, 1290, 1673
Bme18I	GGWCC	3 cut(s)	571, 1213, 1222
BmgT120I	GGNCC	4 cut(s)	223, 571, 1213, 1222
BmiI	GGNNCC	2 cut(s)	1670, 2227
BmrFI	CCNGG	5 cut(s)	27, 542, 575, 1290, 1673
BmrI	ACTGGG	1 cut(s)	1591
BmtI	GCTAGC	1 cut(s)	114
BmuI	ACTGGG	1 cut(s)	1591
BpiI	GAAGAC	3 cut(s)	960, 994, 1906
BpmI	CTGGAG	1 cut(s)	2286
BpuEI	CTTGAG	3 cut(s)	637, 943, 2300
BsaBI	GATNNNNATC	2 cut(s)	771, 1958
BsaI	GGTCTC	2 cut(s)	491, 515
BsaJI	CCNNGG	7 cut(s)	25, 226, 541, 574, 1664, 1771, 2146
BsaXI	ACNNNNNCTCC	2 cut(s)	632, 662
Bsc4I	CCNNNNNNNGG	6 cut(s)	419, 716, 1777, 2067, 2068, 2236
Bse1I	ACTGG	2 cut(s)	821, 1586
Bse21I	CCTNAGG	2 cut(s)	1119, 2202
Bse3DI	GCAATG	3 cut(s)	913, 1149, 2174
Bse8I	GATNNNNATC	2 cut(s)	771, 1958
BseBI	CCWGG	5 cut(s)	27, 542, 575, 1290, 1673
BseDI	CCNNGG	7 cut(s)	25, 226, 541, 574, 1664, 1771, 2146
BseJI	GATNNNNATC	2 cut(s)	771, 1958
BseLI	CCNNNNNNNGG	6 cut(s)	419, 716, 1777, 2067, 2068, 2236
BseMI	GCAATG	3 cut(s)	913, 1149, 2174
BseMII	CTCAG	5 cut(s)	450, 522, 570, 1455, 2193
BseNI	ACTGG	2 cut(s)	821, 1586
BseRI	GAGGAG	7 cut(s)	326, 329, 332, 335, 338, 1423, 2261
BseSI	GKGCMC	1 cut(s)	2068
BseXI	GCAGC	4 cut(s)	241, 263, 700, 1645
BsgI	GTGCAG	1 cut(s)	1744
Bsh1236I	CGCG	2 cut(s)	495, 2148
BshFI	GGCC	4 cut(s)	18, 224, 1046, 1663
BshNI	GGYRCC	1 cut(s)	1668
BsiHKAI	GWGCWC	4 cut(s)	645, 2068, 2122, 2253
BsiSI	CCGG	2 cut(s)	2180, 2275
BslFI	GGGAC	1 cut(s)	1598
BslI	CCNNNNNNNGG	6 cut(s)	419, 716, 1777, 2067, 2068, 2236
BsmAI	GTCTC	3 cut(s)	491, 515, 1097
BsmFI	GGGAC	1 cut(s)	1598
BsmI	GAATGC	1 cut(s)	2017
BsnI	GGCC	4 cut(s)	18, 224, 1046, 1663
Bso31I	GGTCTC	2 cut(s)	491, 515
Bsp1286I	GDGCHC	4 cut(s)	645, 2068, 2122, 2253
Bsp1407I	TGTACA	2 cut(s)	631, 1422
Bsp19I	CCATGG	1 cut(s)	1664
BspACI	CCGC	9 cut(s)	104, 107, 493, 1849, 1944, 2042, 2092, 2146, 2148
BspANI	GGCC	4 cut(s)	18, 224, 1046, 1663
BspCNI	CTCAG	5 cut(s)	451, 521, 569, 1454, 2194
BspFNI	CGCG	2 cut(s)	495, 2148
BspHI	TCATGA	1 cut(s)	2032
BspLI	GGNNCC	2 cut(s)	1670, 2227
BspOI	GCTAGC	1 cut(s)	114
BspPI	GGATC	6 cut(s)	428, 952, 1123, 2137, 2220, 2233
BspT107I	GGYRCC	1 cut(s)	1668
BspTNI	GGTCTC	2 cut(s)	491, 515
BsrDI	GCAATG	3 cut(s)	913, 1149, 2174
BsrGI	TGTACA	2 cut(s)	631, 1422
BsrI	ACTGG	2 cut(s)	821, 1586
BssECI	CCNNGG	7 cut(s)	25, 226, 541, 574, 1664, 1771, 2146
BssT1I	CCWWGG	2 cut(s)	226, 1664
Bst2UI	CCWGG	5 cut(s)	27, 542, 575, 1290, 1673
Bst4CI	ACNGT	4 cut(s)	636, 1427, 1772, 2248
Bst6I	CTCTTC	4 cut(s)	303, 893, 1245, 1400
BstAUI	TGTACA	2 cut(s)	631, 1422
BstC8I	GCNNGC	4 cut(s)	112, 711, 1147, 2242
BstDEI	CTNAG	9 cut(s)	459, 508, 556, 1065, 1119, 1441, 1629, 1908, 2202
BstDSI	CCRYGG	3 cut(s)	1664, 1771, 2146
BstEII	GGTNACC	1 cut(s)	1292
BstFNI	CGCG	2 cut(s)	495, 2148
BstMAI	GTCTC	3 cut(s)	491, 515, 1097
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 602, 1043, 1151, 1660
BstNI	CCWGG	5 cut(s)	27, 542, 575, 1290, 1673
BstNSI	RCATGY	3 cut(s)	649, 1685, 2244
BstPI	GGTNACC	1 cut(s)	1292
BstSCI	CCNGG	5 cut(s)	25, 540, 573, 1288, 1671
BstSFI	CTRYAG	1 cut(s)	1533
BstSLI	GKGCMC	1 cut(s)	2068
BstUI	CGCG	2 cut(s)	495, 2148
BstV1I	GCAGC	4 cut(s)	241, 263, 700, 1645
BstV2I	GAAGAC	3 cut(s)	960, 994, 1906
BstX2I	RGATCY	4 cut(s)	433, 1015, 2142, 2225
BstXI	CCANNNNNNTGG	3 cut(s)	68, 163, 1304
BstYI	RGATCY	4 cut(s)	433, 1015, 2142, 2225
Bsu36I	CCTNAGG	2 cut(s)	1119, 2202
BsuRI	GGCC	4 cut(s)	18, 224, 1046, 1663
BtgI	CCRYGG	3 cut(s)	1664, 1771, 2146
BtsI	GCAGTG	1 cut(s)	1756
BtsIMutI	CAGTG	3 cut(s)	814, 1432, 1756
Cac8I	GCNNGC	4 cut(s)	112, 711, 1147, 2242
CaiI	CAGNNNCTG	1 cut(s)	574
CciI	TCATGA	1 cut(s)	2032
Cfr13I	GGNCC	4 cut(s)	223, 571, 1213, 1222
Cfr42I	CCGCGG	1 cut(s)	2149
CseI	GACGC	1 cut(s)	852
CsiI	ACCWGGT	1 cut(s)	1288
Csp6I	GTAC	6 cut(s)	632, 1352, 1423, 1669, 1823, 1832
CviQI	GTAC	6 cut(s)	632, 1352, 1423, 1669, 1823, 1832
DdeI	CTNAG	9 cut(s)	459, 508, 556, 1065, 1119, 1441, 1629, 1908, 2202
DraIII	CACNNNGTG	2 cut(s)	1160, 1292
DrdI	GACNNNNNNGTC	1 cut(s)	962
DseDI	GACNNNNNNGTC	1 cut(s)	962
EaeI	YGGCCR	1 cut(s)	1044
Eam1104I	CTCTTC	4 cut(s)	303, 893, 1245, 1400
EarI	CTCTTC	4 cut(s)	303, 893, 1245, 1400
Eco130I	CCWWGG	2 cut(s)	226, 1664
Eco31I	GGTCTC	2 cut(s)	491, 515
Eco32I	GATATC	1 cut(s)	1648
Eco47I	GGWCC	3 cut(s)	571, 1213, 1222
Eco57I	CTGAAG	3 cut(s)	815, 988, 1176
Eco81I	CCTNAGG	2 cut(s)	1119, 2202
Eco91I	GGTNACC	1 cut(s)	1292
EcoO109I	RGGNCCY	1 cut(s)	571
EcoO65I	GGTNACC	1 cut(s)	1292
EcoRI	GAATTC	1 cut(s)	2151
EcoRII	CCWGG	5 cut(s)	25, 540, 573, 1288, 1671
EcoRV	GATATC	1 cut(s)	1648
EcoT14I	CCWWGG	2 cut(s)	226, 1664
EcoT22I	ATGCAT	5 cut(s)	607, 976, 987, 1687, 2017
ErhI	CCWWGG	2 cut(s)	226, 1664
FalI	AAGNNNNNCTT	8 cut(s)	914, 946, 1242, 1274, 1794, 1826, 1809, 1841
FaqI	GGGAC	1 cut(s)	1598
FauI	CCCGC	1 cut(s)	1937
FbaI	TGATCA	4 cut(s)	466, 1099, 1545, 1552
FblI	GTMKAC	1 cut(s)	1518
Fnu4HI	GCNGC	6 cut(s)	105, 108, 252, 255, 714, 1634
Fsp4HI	GCNGC	6 cut(s)	105, 108, 252, 255, 714, 1634
FspBI	CTAG	7 cut(s)	111, 227, 237, 360, 783, 1011, 1338
GluI	GCNGC	6 cut(s)	105, 108, 252, 255, 714, 1634
GsuI	CTGGAG	1 cut(s)	2286
HaeIII	GGCC	4 cut(s)	18, 224, 1046, 1663
HapII	CCGG	2 cut(s)	2180, 2275
HgaI	GACGC	1 cut(s)	852
HincII	GTYRAC	2 cut(s)	651, 1519
HindII	GTYRAC	2 cut(s)	651, 1519
HpaI	GTTAAC	1 cut(s)	651
HpaII	CCGG	2 cut(s)	2180, 2275
HphI	GGTGA	3 cut(s)	410, 1304, 1792
Hpy166II	GTNNAC	6 cut(s)	632, 651, 1213, 1401, 1519, 2066
Hpy8I	GTNNAC	6 cut(s)	632, 651, 1213, 1401, 1519, 2066
Hpy99I	CGWCG	3 cut(s)	84, 344, 347
HpyAV	CCTTC	6 cut(s)	278, 386, 1200, 1771, 2029, 2078
HpyCH4III	ACNGT	4 cut(s)	636, 1427, 1772, 2248
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 602, 1043, 1151, 1660
HpyF3I	CTNAG	9 cut(s)	459, 508, 556, 1065, 1119, 1441, 1629, 1908, 2202
KpnI	GGTACC	1 cut(s)	1672
Ksp22I	TGATCA	4 cut(s)	466, 1099, 1545, 1552
KspAI	GTTAAC	1 cut(s)	651
KspI	CCGCGG	1 cut(s)	2149
LmnI	GCTCC	4 cut(s)	640, 1410, 2044, 2305
Lsp1109I	GCAGC	4 cut(s)	241, 263, 700, 1645
MabI	ACCWGGT	1 cut(s)	1288
MaeI	CTAG	7 cut(s)	111, 227, 237, 360, 783, 1011, 1338
MaeIII	GTNAC	6 cut(s)	293, 362, 398, 1292, 1340, 2004
MflI	RGATCY	4 cut(s)	433, 1015, 2142, 2225
MhlI	GDGCHC	4 cut(s)	645, 2068, 2122, 2253
MlsI	TGGCCA	1 cut(s)	1046
MluNI	TGGCCA	1 cut(s)	1046
MlyI	GAGTC	6 cut(s)	290, 296, 500, 524, 548, 950
MmeI	TCCRAC	3 cut(s)	576, 618, 801
Mox20I	TGGCCA	1 cut(s)	1046
Mph1103I	ATGCAT	5 cut(s)	607, 976, 987, 1687, 2017
MroXI	GAANNNNTTC	3 cut(s)	583, 1254, 1980
MscI	TGGCCA	1 cut(s)	1046
MseI	TTAA	8 cut(s)	650, 771, 1167, 1206, 1613, 1749, 2162, 2211
MslI	CAYNNNNRTG	3 cut(s)	610, 1560, 2037
Msp20I	TGGCCA	1 cut(s)	1046
MspA1I	CMGCKG	3 cut(s)	254, 1849, 2148
MspI	CCGG	2 cut(s)	2180, 2275
MspR9I	CCNGG	5 cut(s)	27, 542, 575, 1290, 1673
Mva1269I	GAATGC	1 cut(s)	2017
MvaI	CCWGG	5 cut(s)	27, 542, 575, 1290, 1673
MvnI	CGCG	2 cut(s)	495, 2148
MwoI	GCNNNNNNNGC	5 cut(s)	251, 602, 1043, 1151, 1660
NcoI	CCATGG	1 cut(s)	1664
NheI	GCTAGC	1 cut(s)	110
NlaIV	GGNNCC	2 cut(s)	1670, 2227
NmuCI	GTSAC	6 cut(s)	293, 362, 398, 1292, 1340, 2004
NsiI	ATGCAT	5 cut(s)	607, 976, 987, 1687, 2017
NspI	RCATGY	3 cut(s)	649, 1685, 2244
PaeI	GCATGC	1 cut(s)	2244
PagI	TCATGA	1 cut(s)	2032
PciI	ACATGT	1 cut(s)	645
PctI	GAATGC	1 cut(s)	2017
PdmI	GAANNNNTTC	3 cut(s)	583, 1254, 1980
PfeI	GAWTC	4 cut(s)	152, 353, 579, 779
PflMI	CCANNNNNTGG	1 cut(s)	2236
PkrI	GCNGC	6 cut(s)	106, 109, 253, 256, 715, 1635
PleI	GAGTC	6 cut(s)	290, 296, 500, 524, 548, 950
PpsI	GAGTC	6 cut(s)	290, 296, 500, 524, 548, 950
PpuMI	RGGWCCY	1 cut(s)	571
PscI	ACATGT	1 cut(s)	645
PsiI	TTATAA	2 cut(s)	189, 1568
Psp5II	RGGWCCY	1 cut(s)	571
Psp6I	CCWGG	5 cut(s)	25, 540, 573, 1288, 1671
PspEI	GGTNACC	1 cut(s)	1292
PspGI	CCWGG	5 cut(s)	25, 540, 573, 1288, 1671
PspN4I	GGNNCC	2 cut(s)	1670, 2227
PspPI	GGNCC	4 cut(s)	223, 571, 1213, 1222
PspPPI	RGGWCCY	1 cut(s)	571
PstNI	CAGNNNCTG	1 cut(s)	574
PsuI	RGATCY	4 cut(s)	433, 1015, 2142, 2225
PvuII	CAGCTG	1 cut(s)	254
RsaI	GTAC	6 cut(s)	633, 1353, 1424, 1670, 1824, 1833
RsaNI	GTAC	6 cut(s)	632, 1352, 1423, 1669, 1823, 1832
RseI	CAYNNNNRTG	3 cut(s)	610, 1560, 2037
SacII	CCGCGG	1 cut(s)	2149
SalI	GTCGAC	1 cut(s)	1517
SaqAI	TTAA	8 cut(s)	650, 771, 1167, 1206, 1613, 1749, 2162, 2211
SatI	GCNGC	6 cut(s)	105, 108, 252, 255, 714, 1634
Sau96I	GGNCC	4 cut(s)	223, 571, 1213, 1222
ScaI	AGTACT	1 cut(s)	1353
SchI	GAGTC	6 cut(s)	290, 296, 500, 524, 548, 950
ScrFI	CCNGG	5 cut(s)	27, 542, 575, 1290, 1673
SduI	GDGCHC	4 cut(s)	645, 2068, 2122, 2253
SexAI	ACCWGGT	1 cut(s)	1288
SfcI	CTRYAG	1 cut(s)	1533
Sfr303I	CCGCGG	1 cut(s)	2149
SgrBI	CCGCGG	1 cut(s)	2149
SinI	GGWCC	3 cut(s)	571, 1213, 1222
SmiMI	CAYNNNNRTG	3 cut(s)	610, 1560, 2037
SmlI	CTYRAG	3 cut(s)	616, 958, 2279
SmoI	CTYRAG	3 cut(s)	616, 958, 2279
SphI	GCATGC	1 cut(s)	2244
SsiI	CCGC	9 cut(s)	104, 107, 493, 1849, 1944, 2042, 2092, 2146, 2148
SspI	AATATT	1 cut(s)	1876
SspMI	CTAG	7 cut(s)	111, 227, 237, 360, 783, 1011, 1338
StyD4I	CCNGG	5 cut(s)	25, 540, 573, 1288, 1671
StyI	CCWWGG	2 cut(s)	226, 1664
TaaI	ACNGT	4 cut(s)	636, 1427, 1772, 2248
TaqI	TCGA	4 cut(s)	1331, 1518, 1984, 2324
TaqII	GACCGA	1 cut(s)	1239
TatI	WGTACW	3 cut(s)	631, 1351, 1422
TauI	GCSGC	2 cut(s)	107, 110
TfiI	GAWTC	4 cut(s)	152, 353, 579, 779
Tru1I	TTAA	8 cut(s)	650, 771, 1167, 1206, 1613, 1749, 2162, 2211
Tru9I	TTAA	8 cut(s)	650, 771, 1167, 1206, 1613, 1749, 2162, 2211
TscAI	CASTG	3 cut(s)	821, 1432, 1763
TseFI	GTSAC	6 cut(s)	293, 362, 398, 1292, 1340, 2004
TseI	GCWGC	4 cut(s)	251, 254, 713, 1633
Tsp45I	GTSAC	6 cut(s)	293, 362, 398, 1292, 1340, 2004
TspGWI	ACGGA	2 cut(s)	360, 1085
TspRI	CASTG	3 cut(s)	821, 1432, 1763
Van91I	CCANNNNNTGG	1 cut(s)	2236
VneI	GTGCAC	1 cut(s)	2064
VpaK11BI	GGWCC	3 cut(s)	571, 1213, 1222
XapI	RAATTY	5 cut(s)	407, 2151, 2158, 2192, 2332
XceI	RCATGY	3 cut(s)	649, 1685, 2244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1355
XmaJI	CCTAGG	1 cut(s)	226
XmiI	GTMKAC	1 cut(s)	1518
XmnI	GAANNNNTTC	3 cut(s)	583, 1254, 1980
XspI	CTAG	7 cut(s)	111, 227, 237, 360, 783, 1011, 1338
ZrmI	AGTACT	1 cut(s)	1353
Zsp2I	ATGCAT	5 cut(s)	607, 976, 987, 1687, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.