Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36500 FvH4_4g04180 |
| rosa_chinensis | RchiOBHm_Chr4g0394641 RchiOBHm_Chr4g0394671 |
| rosa_laevigata | RLG00000009677 RLG00000009680 RLG00000009681 RLG00000009682 |
| rosa_multiflora | Rmu_sc0005424.1_g000006 Rmu_sc0005424.1_g000007 Rmu_sc0006945.1_g000031 Rmu_sc0006945.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00304330 Rroxscaffold_5G00339680 |
| rosa_rugosa | Rorug03G0362900.1 Rorug03G0363000.1 Rorug03G0363400.1 |
| rosa_samantha | Rh4AG053500 Rh4AG054100 Rh4BG051500 Rh4BG051800 |
| rosa_wichuraiana | Rw1G019920 Rw4G004170 Rw4G004310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 485 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1345 |
| AccII | CGCG | 2 cut(s) | 229, 558 |
| AciI | CCGC | 5 cut(s) | 128, 300, 556, 1399, 1437 |
| AclI | AACGTT | 1 cut(s) | 1360 |
| AclWI | GGATC | 2 cut(s) | 12, 134 |
| AcoI | YGGCCR | 2 cut(s) | 297, 1418 |
| AcsI | RAATTY | 1 cut(s) | 614 |
| AcuI | CTGAAG | 1 cut(s) | 828 |
| AcyI | GRCGYC | 1 cut(s) | 482 |
| AfaI | GTAC | 5 cut(s) | 324, 813, 894, 1060, 1307 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1132, 1345, 1421 |
| AflIII | ACRYGT | 1 cut(s) | 1191 |
| AgsI | TTSAA | 8 cut(s) | 349, 527, 572, 674, 790, 1288, 1460, 1467 |
| AjnI | CCWGG | 2 cut(s) | 1131, 1420 |
| AluBI | AGCT | 3 cut(s) | 284, 319, 398 |
| AluI | AGCT | 3 cut(s) | 284, 319, 398 |
| Alw26I | GTCTC | 3 cut(s) | 136, 922, 1303 |
| AlwI | GGATC | 2 cut(s) | 12, 134 |
| Ama87I | CYCGRG | 2 cut(s) | 447, 1045 |
| AoxI | GGCC | 2 cut(s) | 297, 1418 |
| ApeKI | GCWGC | 1 cut(s) | 76 |
| ApoI | RAATTY | 1 cut(s) | 614 |
| AseI | ATTAAT | 2 cut(s) | 459, 1404 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1164 |
| AspS9I | GGNCC | 2 cut(s) | 542, 1128 |
| AsuHPI | GGTGA | 1 cut(s) | 1173 |
| AsuII | TTCGAA | 1 cut(s) | 985 |
| AvaI | CYCGRG | 2 cut(s) | 447, 1045 |
| AvaII | GGWCC | 2 cut(s) | 542, 1128 |
| BalI | TGGCCA | 1 cut(s) | 1420 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 258, 290 |
| BbvCI | CCTCAGC | 1 cut(s) | 206 |
| BbvI | GCAGC | 1 cut(s) | 63 |
| BccI | CCATC | 6 cut(s) | 613, 697, 875, 1120, 1347, 1348 |
| BciT130I | CCWGG | 2 cut(s) | 1133, 1422 |
| BciVI | GTATCC | 1 cut(s) | 511 |
| BclI | TGATCA | 1 cut(s) | 1078 |
| BcoDI | GTCTC | 3 cut(s) | 136, 922, 1303 |
| BfaI | CTAG | 1 cut(s) | 1343 |
| BfmI | CTRYAG | 1 cut(s) | 213 |
| BfuI | GTATCC | 1 cut(s) | 511 |
| BglII | AGATCT | 1 cut(s) | 853 |
| BisI | GCNGC | 2 cut(s) | 77, 300 |
| BlsI | GCNGC | 2 cut(s) | 78, 301 |
| BmcAI | AGTACT | 1 cut(s) | 1060 |
| Bme1390I | CCNGG | 2 cut(s) | 1133, 1422 |
| Bme18I | GGWCC | 2 cut(s) | 542, 1128 |
| BmeT110I | CYCGRG | 2 cut(s) | 447, 1045 |
| BmgT120I | GGNCC | 2 cut(s) | 542, 1128 |
| BmiI | GGNNCC | 1 cut(s) | 1130 |
| BmrFI | CCNGG | 2 cut(s) | 1133, 1422 |
| BmrI | ACTGGG | 1 cut(s) | 401 |
| BmsI | GCATC | 1 cut(s) | 1187 |
| BmuI | ACTGGG | 1 cut(s) | 401 |
| BoxI | GACNNNNGTC | 1 cut(s) | 215 |
| BpmI | CTGGAG | 1 cut(s) | 1154 |
| Bpu10I | CCTNAGC | 1 cut(s) | 206 |
| Bpu14I | TTCGAA | 1 cut(s) | 985 |
| BpuEI | CTTGAG | 2 cut(s) | 932, 1354 |
| Bsa29I | ATCGAT | 1 cut(s) | 138 |
| BsaBI | GATNNNNATC | 1 cut(s) | 761 |
| BsaHI | GRCGYC | 1 cut(s) | 482 |
| BsaI | GGTCTC | 1 cut(s) | 136 |
| BsaJI | CCNNGG | 4 cut(s) | 836, 1131, 1278, 1415 |
| BsaWI | WCCGGW | 1 cut(s) | 1186 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1132, 1345, 1421 |
| Bse118I | RCCGGY | 2 cut(s) | 530, 1125 |
| Bse1I | ACTGG | 3 cut(s) | 356, 396, 953 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| Bse8I | GATNNNNATC | 1 cut(s) | 761 |
| BseBI | CCWGG | 2 cut(s) | 1133, 1422 |
| BseCI | ATCGAT | 1 cut(s) | 138 |
| BseDI | CCNNGG | 4 cut(s) | 836, 1131, 1278, 1415 |
| BseGI | GGATG | 2 cut(s) | 708, 919 |
| BseJI | GATNNNNATC | 1 cut(s) | 761 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1132, 1345, 1421 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseMII | CTCAG | 5 cut(s) | 197, 714, 735, 957, 1160 |
| BseNI | ACTGG | 3 cut(s) | 356, 396, 953 |
| BseRI | GAGGAG | 2 cut(s) | 420, 1364 |
| BseXI | GCAGC | 1 cut(s) | 63 |
| Bsh1236I | CGCG | 2 cut(s) | 229, 558 |
| BshFI | GGCC | 2 cut(s) | 299, 1420 |
| BshVI | ATCGAT | 1 cut(s) | 138 |
| BsiHKCI | CYCGRG | 2 cut(s) | 447, 1045 |
| BsiSI | CCGG | 3 cut(s) | 531, 1126, 1187 |
| BslFI | GGGAC | 2 cut(s) | 493, 1114 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1132, 1345, 1421 |
| BsmAI | GTCTC | 3 cut(s) | 136, 922, 1303 |
| BsmFI | GGGAC | 2 cut(s) | 493, 1114 |
| BsmI | GAATGC | 1 cut(s) | 78 |
| BsnI | GGCC | 2 cut(s) | 299, 1420 |
| Bso31I | GGTCTC | 1 cut(s) | 136 |
| BsoBI | CYCGRG | 2 cut(s) | 447, 1045 |
| Bsp119I | TTCGAA | 1 cut(s) | 985 |
| Bsp1407I | TGTACA | 1 cut(s) | 1305 |
| Bsp19I | CCATGG | 2 cut(s) | 836, 1415 |
| BspACI | CCGC | 5 cut(s) | 128, 300, 556, 1399, 1437 |
| BspANI | GGCC | 2 cut(s) | 299, 1420 |
| BspCNI | CTCAG | 5 cut(s) | 198, 715, 736, 958, 1161 |
| BspDI | ATCGAT | 1 cut(s) | 138 |
| BspFNI | CGCG | 2 cut(s) | 229, 558 |
| BspHI | TCATGA | 1 cut(s) | 765 |
| BspLI | GGNNCC | 1 cut(s) | 1130 |
| BspPI | GGATC | 2 cut(s) | 12, 134 |
| BspQI | GCTCTTC | 1 cut(s) | 1087 |
| BspT104I | TTCGAA | 1 cut(s) | 985 |
| BspTNI | GGTCTC | 1 cut(s) | 136 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BsrFI | RCCGGY | 2 cut(s) | 530, 1125 |
| BsrGI | TGTACA | 1 cut(s) | 1305 |
| BsrI | ACTGG | 3 cut(s) | 356, 396, 953 |
| BssAI | RCCGGY | 2 cut(s) | 530, 1125 |
| BssECI | CCNNGG | 4 cut(s) | 836, 1131, 1278, 1415 |
| BssNI | GRCGYC | 1 cut(s) | 482 |
| BssT1I | CCWWGG | 3 cut(s) | 836, 1278, 1415 |
| Bst2UI | CCWGG | 2 cut(s) | 1133, 1422 |
| Bst4CI | ACNGT | 3 cut(s) | 214, 847, 1142 |
| Bst6I | CTCTTC | 3 cut(s) | 350, 834, 1087 |
| BstACI | GRCGYC | 1 cut(s) | 482 |
| BstAUI | TGTACA | 1 cut(s) | 1305 |
| BstBI | TTCGAA | 1 cut(s) | 985 |
| BstC8I | GCNNGC | 5 cut(s) | 33, 114, 367, 532, 1010 |
| BstDEI | CTNAG | 5 cut(s) | 206, 723, 744, 966, 1169 |
| BstDSI | CCRYGG | 2 cut(s) | 836, 1415 |
| BstF5I | GGATG | 2 cut(s) | 708, 919 |
| BstFNI | CGCG | 2 cut(s) | 229, 558 |
| BstMAI | GTCTC | 3 cut(s) | 136, 922, 1303 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 290, 299, 536 |
| BstNI | CCWGG | 2 cut(s) | 1133, 1422 |
| BstNSI | RCATGY | 4 cut(s) | 120, 365, 1012, 1195 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 215 |
| BstSCI | CCNGG | 2 cut(s) | 1131, 1420 |
| BstSFI | CTRYAG | 1 cut(s) | 213 |
| BstUI | CGCG | 2 cut(s) | 229, 558 |
| BstV1I | GCAGC | 1 cut(s) | 63 |
| BstX2I | RGATCY | 1 cut(s) | 853 |
| BstYI | RGATCY | 1 cut(s) | 853 |
| Bsu15I | ATCGAT | 1 cut(s) | 138 |
| BsuI | GTATCC | 1 cut(s) | 511 |
| BsuRI | GGCC | 2 cut(s) | 299, 1420 |
| BsuTUI | ATCGAT | 1 cut(s) | 138 |
| BtgI | CCRYGG | 2 cut(s) | 836, 1415 |
| BtsCI | GGATG | 2 cut(s) | 708, 919 |
| BtsI | GCAGTG | 2 cut(s) | 300, 1272 |
| BtsIMutI | CAGTG | 4 cut(s) | 300, 960, 963, 1272 |
| Cac8I | GCNNGC | 5 cut(s) | 33, 114, 367, 532, 1010 |
| CciI | TCATGA | 1 cut(s) | 765 |
| Cfr10I | RCCGGY | 2 cut(s) | 530, 1125 |
| Cfr13I | GGNCC | 2 cut(s) | 542, 1128 |
| ClaI | ATCGAT | 1 cut(s) | 138 |
| CseI | GACGC | 1 cut(s) | 749 |
| Csp6I | GTAC | 5 cut(s) | 323, 812, 893, 1059, 1306 |
| CviQI | GTAC | 5 cut(s) | 323, 812, 893, 1059, 1306 |
| DdeI | CTNAG | 5 cut(s) | 206, 723, 744, 966, 1169 |
| EaeI | YGGCCR | 2 cut(s) | 297, 1418 |
| Eam1104I | CTCTTC | 3 cut(s) | 350, 834, 1087 |
| EarI | CTCTTC | 3 cut(s) | 350, 834, 1087 |
| Eco130I | CCWWGG | 3 cut(s) | 836, 1278, 1415 |
| Eco31I | GGTCTC | 1 cut(s) | 136 |
| Eco32I | GATATC | 1 cut(s) | 105 |
| Eco47I | GGWCC | 2 cut(s) | 542, 1128 |
| Eco57I | CTGAAG | 1 cut(s) | 828 |
| Eco88I | CYCGRG | 2 cut(s) | 447, 1045 |
| EcoO109I | RGGNCCY | 1 cut(s) | 542 |
| EcoRII | CCWGG | 2 cut(s) | 1131, 1420 |
| EcoRV | GATATC | 1 cut(s) | 105 |
| EcoT14I | CCWWGG | 3 cut(s) | 836, 1278, 1415 |
| ErhI | CCWWGG | 3 cut(s) | 836, 1278, 1415 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1149, 1181 |
| FaqI | GGGAC | 2 cut(s) | 493, 1114 |
| FauI | CCCGC | 1 cut(s) | 1430 |
| FbaI | TGATCA | 1 cut(s) | 1078 |
| Fnu4HI | GCNGC | 2 cut(s) | 77, 300 |
| FokI | GGATG | 2 cut(s) | 715, 926 |
| Fsp4HI | GCNGC | 2 cut(s) | 77, 300 |
| FspBI | CTAG | 1 cut(s) | 1343 |
| GluI | GCNGC | 2 cut(s) | 77, 300 |
| GsuI | CTGGAG | 1 cut(s) | 1154 |
| HaeIII | GGCC | 2 cut(s) | 299, 1420 |
| HapII | CCGG | 3 cut(s) | 531, 1126, 1187 |
| HgaI | GACGC | 1 cut(s) | 749 |
| Hin1I | GRCGYC | 1 cut(s) | 482 |
| HinfI | GANTC | 2 cut(s) | 552, 1463 |
| HpaII | CCGG | 3 cut(s) | 531, 1126, 1187 |
| HphI | GGTGA | 1 cut(s) | 1173 |
| Hpy166II | GTNNAC | 1 cut(s) | 1306 |
| Hpy188I | TCNGA | 5 cut(s) | 191, 388, 487, 1170, 1252 |
| Hpy188III | TCNNGA | 9 cut(s) | 167, 173, 278, 449, 515, 766, 1225, 1371, 1460 |
| Hpy8I | GTNNAC | 1 cut(s) | 1306 |
| Hpy99I | CGWCG | 1 cut(s) | 1395 |
| HpyAV | CCTTC | 4 cut(s) | 891, 1019, 1226, 1253 |
| HpyCH4III | ACNGT | 3 cut(s) | 214, 847, 1142 |
| HpyCH4IV | ACGT | 5 cut(s) | 27, 248, 482, 1105, 1360 |
| HpyCH4V | TGCA | 8 cut(s) | 116, 161, 365, 471, 623, 634, 873, 1211 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 290, 299, 536 |
| HpyF3I | CTNAG | 5 cut(s) | 206, 723, 744, 966, 1169 |
| HpySE526I | ACGT | 5 cut(s) | 27, 248, 482, 1105, 1360 |
| Hsp92I | GRCGYC | 1 cut(s) | 482 |
| KroI | GCCGGC | 1 cut(s) | 530 |
| KroNI | GCCGGC | 1 cut(s) | 532 |
| Ksp22I | TGATCA | 1 cut(s) | 1078 |
| LguI | GCTCTTC | 1 cut(s) | 1087 |
| LmnI | GCTCC | 2 cut(s) | 395, 1440 |
| Lsp1109I | GCAGC | 1 cut(s) | 63 |
| LweI | GCATC | 1 cut(s) | 1187 |
| MaeI | CTAG | 1 cut(s) | 1343 |
| MaeII | ACGT | 5 cut(s) | 27, 248, 482, 1105, 1360 |
| MaeIII | GTNAC | 6 cut(s) | 49, 380, 419, 955, 1311, 1394 |
| MboII | GAAGA | 8 cut(s) | 70, 337, 584, 587, 821, 824, 1104, 1169 |
| MfeI | CAATTG | 1 cut(s) | 975 |
| MflI | RGATCY | 1 cut(s) | 853 |
| MlsI | TGGCCA | 1 cut(s) | 1420 |
| MluCI | AATT | 5 cut(s) | 522, 614, 975, 1321, 1468 |
| MluNI | TGGCCA | 1 cut(s) | 1420 |
| MmeI | TCCRAC | 2 cut(s) | 621, 1069 |
| Mox20I | TGGCCA | 1 cut(s) | 1420 |
| MroNI | GCCGGC | 1 cut(s) | 530 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1164 |
| MscI | TGGCCA | 1 cut(s) | 1420 |
| MseI | TTAA | 3 cut(s) | 459, 612, 1404 |
| MslI | CAYNNNNRTG | 2 cut(s) | 872, 878 |
| Msp20I | TGGCCA | 1 cut(s) | 1420 |
| MspA1I | CMGCKG | 1 cut(s) | 302 |
| MspI | CCGG | 3 cut(s) | 531, 1126, 1187 |
| MspR9I | CCNGG | 2 cut(s) | 1133, 1422 |
| MunI | CAATTG | 1 cut(s) | 975 |
| Mva1269I | GAATGC | 1 cut(s) | 78 |
| MvaI | CCWGG | 2 cut(s) | 1133, 1422 |
| MvnI | CGCG | 2 cut(s) | 229, 558 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 290, 299, 536 |
| NaeI | GCCGGC | 1 cut(s) | 532 |
| NcoI | CCATGG | 2 cut(s) | 836, 1415 |
| NgoMIV | GCCGGC | 1 cut(s) | 530 |
| NlaIV | GGNNCC | 1 cut(s) | 1130 |
| NmuCI | GTSAC | 2 cut(s) | 419, 955 |
| NspI | RCATGY | 4 cut(s) | 120, 365, 1012, 1195 |
| NspV | TTCGAA | 1 cut(s) | 985 |
| PaeI | GCATGC | 1 cut(s) | 1012 |
| PagI | TCATGA | 1 cut(s) | 765 |
| PciI | ACATGT | 1 cut(s) | 1191 |
| PciSI | GCTCTTC | 1 cut(s) | 1087 |
| PctI | GAATGC | 1 cut(s) | 78 |
| PdiI | GCCGGC | 1 cut(s) | 532 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1164 |
| PfeI | GAWTC | 2 cut(s) | 552, 1463 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1345 |
| PkrI | GCNGC | 2 cut(s) | 78, 301 |
| PpuMI | RGGWCCY | 1 cut(s) | 542 |
| PscI | ACATGT | 1 cut(s) | 1191 |
| PshAI | GACNNNNGTC | 1 cut(s) | 215 |
| PshBI | ATTAAT | 2 cut(s) | 459, 1404 |
| Psp1406I | AACGTT | 1 cut(s) | 1360 |
| Psp5II | RGGWCCY | 1 cut(s) | 542 |
| Psp6I | CCWGG | 2 cut(s) | 1131, 1420 |
| PspGI | CCWGG | 2 cut(s) | 1131, 1420 |
| PspN4I | GGNNCC | 1 cut(s) | 1130 |
| PspPI | GGNCC | 2 cut(s) | 542, 1128 |
| PspPPI | RGGWCCY | 1 cut(s) | 542 |
| PsuI | RGATCY | 1 cut(s) | 853 |
| RsaI | GTAC | 5 cut(s) | 324, 813, 894, 1060, 1307 |
| RsaNI | GTAC | 5 cut(s) | 323, 812, 893, 1059, 1306 |
| RseI | CAYNNNNRTG | 2 cut(s) | 872, 878 |
| SapI | GCTCTTC | 1 cut(s) | 1087 |
| SaqAI | TTAA | 3 cut(s) | 459, 612, 1404 |
| SatI | GCNGC | 2 cut(s) | 77, 300 |
| Sau96I | GGNCC | 2 cut(s) | 542, 1128 |
| ScaI | AGTACT | 1 cut(s) | 1060 |
| ScrFI | CCNGG | 2 cut(s) | 1133, 1422 |
| SfaNI | GCATC | 1 cut(s) | 1187 |
| SfcI | CTRYAG | 1 cut(s) | 213 |
| SfuI | TTCGAA | 1 cut(s) | 985 |
| SinI | GGWCC | 2 cut(s) | 542, 1128 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 872, 878 |
| SmlI | CTYRAG | 2 cut(s) | 947, 1369 |
| SmoI | CTYRAG | 2 cut(s) | 947, 1369 |
| SphI | GCATGC | 1 cut(s) | 1012 |
| Sse9I | AATT | 5 cut(s) | 522, 614, 975, 1321, 1468 |
| SsiI | CCGC | 5 cut(s) | 128, 300, 556, 1399, 1437 |
| SspMI | CTAG | 1 cut(s) | 1343 |
| StyD4I | CCNGG | 2 cut(s) | 1131, 1420 |
| StyI | CCWWGG | 3 cut(s) | 836, 1278, 1415 |
| TaaI | ACNGT | 3 cut(s) | 214, 847, 1142 |
| TaiI | ACGT | 5 cut(s) | 30, 251, 485, 1108, 1363 |
| TaqI | TCGA | 4 cut(s) | 15, 138, 903, 985 |
| TaqII | GACCGA | 2 cut(s) | 480, 1244 |
| TasI | AATT | 5 cut(s) | 522, 614, 975, 1321, 1468 |
| TatI | WGTACW | 3 cut(s) | 811, 1058, 1305 |
| TauI | GCSGC | 1 cut(s) | 302 |
| TfiI | GAWTC | 2 cut(s) | 552, 1463 |
| Tru1I | TTAA | 3 cut(s) | 459, 612, 1404 |
| Tru9I | TTAA | 3 cut(s) | 459, 612, 1404 |
| TscAI | CASTG | 4 cut(s) | 300, 960, 970, 1279 |
| TseFI | GTSAC | 2 cut(s) | 419, 955 |
| TseI | GCWGC | 1 cut(s) | 76 |
| Tsp45I | GTSAC | 2 cut(s) | 419, 955 |
| TspDTI | ATGAA | 5 cut(s) | 78, 248, 692, 782, 930 |
| TspGWI | ACGGA | 2 cut(s) | 209, 1291 |
| TspRI | CASTG | 4 cut(s) | 300, 960, 970, 1279 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1345 |
| VpaK11BI | GGWCC | 2 cut(s) | 542, 1128 |
| VspI | ATTAAT | 2 cut(s) | 459, 1404 |
| XapI | RAATTY | 1 cut(s) | 614 |
| XceI | RCATGY | 4 cut(s) | 120, 365, 1012, 1195 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 316, 1342 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1164 |
| XspI | CTAG | 1 cut(s) | 1343 |
| ZraI | GACGTC | 1 cut(s) | 483 |
| ZrmI | AGTACT | 1 cut(s) | 1060 |