Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36500 FvH4_4g04180 |
| rosa_chinensis | RchiOBHm_Chr4g0394641 RchiOBHm_Chr4g0394671 |
| rosa_laevigata | RLG00000009677 RLG00000009680 RLG00000009681 RLG00000009682 |
| rosa_multiflora | Rmu_sc0005424.1_g000006 Rmu_sc0005424.1_g000007 Rmu_sc0006945.1_g000031 Rmu_sc0006945.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00304330 Rroxscaffold_5G00339680 |
| rosa_rugosa | Rorug03G0362900.1 Rorug03G0363000.1 Rorug03G0363400.1 |
| rosa_samantha | Rh4AG053500 Rh4AG054100 Rh4BG051500 Rh4BG051800 |
| rosa_wichuraiana | Rw1G019920 Rw4G004170 Rw4G004310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 486, 798 |
| Acc36I | ACCTGC | 1 cut(s) | 18 |
| Acc65I | GGTACC | 1 cut(s) | 1348 |
| AccB1I | GGYRCC | 1 cut(s) | 1348 |
| AccII | CGCG | 1 cut(s) | 268 |
| AciI | CCGC | 2 cut(s) | 242, 1118 |
| AclI | AACGTT | 1 cut(s) | 750 |
| AclWI | GGATC | 5 cut(s) | 59, 173, 186, 535, 1567 |
| AcsI | RAATTY | 8 cut(s) | 118, 129, 312, 358, 526, 824, 982, 1204 |
| AcyI | GRCGYC | 1 cut(s) | 332 |
| AfaI | GTAC | 4 cut(s) | 345, 641, 1000, 1350 |
| AfeI | AGCGCT | 1 cut(s) | 273 |
| AflII | CTTAAG | 1 cut(s) | 1403 |
| AflIII | ACRYGT | 1 cut(s) | 1023 |
| AjiI | CACGTC | 1 cut(s) | 1645 |
| AjnI | CCWGG | 1 cut(s) | 909 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 170, 202 |
| AluBI | AGCT | 5 cut(s) | 48, 257, 719, 1535, 1664 |
| AluI | AGCT | 5 cut(s) | 48, 257, 719, 1535, 1664 |
| Alw26I | GTCTC | 4 cut(s) | 1010, 1199, 1602, 1753 |
| AlwI | GGATC | 5 cut(s) | 59, 173, 186, 535, 1567 |
| Aor51HI | AGCGCT | 1 cut(s) | 273 |
| AoxI | GGCC | 1 cut(s) | 973 |
| ApeKI | GCWGC | 4 cut(s) | 13, 712, 1535, 1661 |
| ApoI | RAATTY | 8 cut(s) | 118, 129, 312, 358, 526, 824, 982, 1204 |
| Asp718I | GGTACC | 1 cut(s) | 1348 |
| AspA2I | CCTAGG | 1 cut(s) | 815 |
| AspLEI | GCGC | 1 cut(s) | 274 |
| AspS9I | GGNCC | 2 cut(s) | 915, 973 |
| AsuHPI | GGTGA | 5 cut(s) | 44, 256, 716, 844, 857 |
| AvaII | GGWCC | 1 cut(s) | 915 |
| AvrII | CCTAGG | 1 cut(s) | 815 |
| BamHI | GGATCC | 1 cut(s) | 178 |
| BanI | GGYRCC | 1 cut(s) | 1348 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1341, 1373 |
| BbsI | GAAGAC | 1 cut(s) | 1254 |
| BbvI | GCAGC | 3 cut(s) | 724, 1522, 1673 |
| BccI | CCATC | 1 cut(s) | 929 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 640, 674, 1241, 1275 |
| BciT130I | CCWGG | 1 cut(s) | 911 |
| BcoDI | GTCTC | 4 cut(s) | 1010, 1199, 1602, 1753 |
| BfaI | CTAG | 4 cut(s) | 768, 780, 816, 1810 |
| BfmI | CTRYAG | 1 cut(s) | 402 |
| BfoI | RGCGCY | 1 cut(s) | 275 |
| BfrI | CTTAAG | 1 cut(s) | 1403 |
| BfuAI | ACCTGC | 1 cut(s) | 18 |
| BglII | AGATCT | 3 cut(s) | 770, 1165, 1580 |
| BisI | GCNGC | 4 cut(s) | 14, 713, 1536, 1662 |
| BlnI | CCTAGG | 1 cut(s) | 815 |
| BlpI | GCTNAGC | 1 cut(s) | 44 |
| BlsI | GCNGC | 4 cut(s) | 15, 714, 1537, 1663 |
| Bme1390I | CCNGG | 1 cut(s) | 911 |
| Bme18I | GGWCC | 1 cut(s) | 915 |
| BmgBI | CACGTC | 1 cut(s) | 1645 |
| BmgT120I | GGNCC | 2 cut(s) | 915, 973 |
| BmiI | GGNNCC | 5 cut(s) | 180, 667, 916, 974, 1350 |
| BmrFI | CCNGG | 1 cut(s) | 911 |
| BmsI | GCATC | 5 cut(s) | 16, 1249, 1326, 1360, 1640 |
| BoxI | GACNNNNGTC | 1 cut(s) | 75 |
| BpiI | GAAGAC | 1 cut(s) | 1254 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 44 |
| BpuEI | CTTGAG | 1 cut(s) | 1607 |
| Bsa29I | ATCGAT | 1 cut(s) | 207 |
| BsaAI | YACGTR | 1 cut(s) | 1024 |
| BsaBI | GATNNNNATC | 4 cut(s) | 505, 769, 775, 1263 |
| BsaHI | GRCGYC | 1 cut(s) | 332 |
| BsaI | GGTCTC | 1 cut(s) | 1199 |
| BsaJI | CCNNGG | 7 cut(s) | 554, 815, 841, 910, 1292, 1352, 1728 |
| BsaWI | WCCGGW | 1 cut(s) | 917 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 312, 342 |
| Bse118I | RCCGGY | 1 cut(s) | 1061 |
| Bse1I | ACTGG | 1 cut(s) | 1409 |
| Bse3DI | GCAATG | 2 cut(s) | 330, 402 |
| Bse8I | GATNNNNATC | 4 cut(s) | 505, 769, 775, 1263 |
| BseBI | CCWGG | 1 cut(s) | 911 |
| BseCI | ATCGAT | 1 cut(s) | 207 |
| BseDI | CCNNGG | 7 cut(s) | 554, 815, 841, 910, 1292, 1352, 1728 |
| BseGI | GGATG | 7 cut(s) | 225, 564, 937, 1185, 1264, 1341, 1375 |
| BseJI | GATNNNNATC | 4 cut(s) | 505, 769, 775, 1263 |
| BseMI | GCAATG | 2 cut(s) | 330, 402 |
| BseMII | CTCAG | 2 cut(s) | 1191, 1413 |
| BseNI | ACTGG | 1 cut(s) | 1409 |
| BseXI | GCAGC | 3 cut(s) | 724, 1522, 1673 |
| BseYI | CCCAGC | 1 cut(s) | 1538 |
| Bsh1236I | CGCG | 1 cut(s) | 268 |
| BshFI | GGCC | 1 cut(s) | 975 |
| BshNI | GGYRCC | 1 cut(s) | 1348 |
| BshVI | ATCGAT | 1 cut(s) | 207 |
| BsiSI | CCGG | 2 cut(s) | 918, 1062 |
| BsmAI | GTCTC | 4 cut(s) | 1010, 1199, 1602, 1753 |
| BsmBI | CGTCTC | 1 cut(s) | 1602 |
| BsmI | GAATGC | 1 cut(s) | 764 |
| BsnI | GGCC | 1 cut(s) | 975 |
| Bso31I | GGTCTC | 1 cut(s) | 1199 |
| Bsp1407I | TGTACA | 1 cut(s) | 639 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 44 |
| Bsp19I | CCATGG | 1 cut(s) | 1292 |
| Bsp68I | TCGCGA | 1 cut(s) | 268 |
| BspACI | CCGC | 2 cut(s) | 242, 1118 |
| BspANI | GGCC | 1 cut(s) | 975 |
| BspCNI | CTCAG | 2 cut(s) | 1192, 1414 |
| BspDI | ATCGAT | 1 cut(s) | 207 |
| BspFNI | CGCG | 1 cut(s) | 268 |
| BspLI | GGNNCC | 5 cut(s) | 180, 667, 916, 974, 1350 |
| BspMI | ACCTGC | 1 cut(s) | 18 |
| BspPI | GGATC | 5 cut(s) | 59, 173, 186, 535, 1567 |
| BspQI | GCTCTTC | 2 cut(s) | 1475, 1671 |
| BspT107I | GGYRCC | 1 cut(s) | 1348 |
| BspTI | CTTAAG | 1 cut(s) | 1403 |
| BspTNI | GGTCTC | 1 cut(s) | 1199 |
| BsrDI | GCAATG | 2 cut(s) | 330, 402 |
| BsrFI | RCCGGY | 1 cut(s) | 1061 |
| BsrGI | TGTACA | 1 cut(s) | 639 |
| BsrI | ACTGG | 1 cut(s) | 1409 |
| BssAI | RCCGGY | 1 cut(s) | 1061 |
| BssECI | CCNNGG | 7 cut(s) | 554, 815, 841, 910, 1292, 1352, 1728 |
| BssNI | GRCGYC | 1 cut(s) | 332 |
| BssT1I | CCWWGG | 4 cut(s) | 815, 841, 1292, 1728 |
| Bst2UI | CCWGG | 1 cut(s) | 911 |
| Bst4CI | ACNGT | 7 cut(s) | 343, 609, 880, 1074, 1555, 1687, 1778 |
| Bst6I | CTCTTC | 3 cut(s) | 1475, 1671, 1756 |
| BstACI | GRCGYC | 1 cut(s) | 332 |
| BstAFI | CTTAAG | 1 cut(s) | 1403 |
| BstAUI | TGTACA | 1 cut(s) | 639 |
| BstBAI | YACGTR | 1 cut(s) | 1024 |
| BstC8I | GCNNGC | 6 cut(s) | 18, 270, 710, 717, 1466, 1566 |
| BstDEI | CTNAG | 5 cut(s) | 44, 292, 582, 1200, 1422 |
| BstDSI | CCRYGG | 1 cut(s) | 1292 |
| BstF5I | GGATG | 7 cut(s) | 225, 564, 937, 1185, 1264, 1341, 1375 |
| BstFNI | CGCG | 1 cut(s) | 268 |
| BstH2I | RGCGCY | 1 cut(s) | 275 |
| BstHHI | GCGC | 1 cut(s) | 274 |
| BstMAI | GTCTC | 4 cut(s) | 1010, 1199, 1602, 1753 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 26, 329, 1544, 1724 |
| BstNI | CCWGG | 1 cut(s) | 911 |
| BstNSI | RCATGY | 2 cut(s) | 1322, 1468 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 75 |
| BstSCI | CCNGG | 1 cut(s) | 909 |
| BstSFI | CTRYAG | 1 cut(s) | 402 |
| BstUI | CGCG | 1 cut(s) | 268 |
| BstV1I | GCAGC | 3 cut(s) | 724, 1522, 1673 |
| BstV2I | GAAGAC | 1 cut(s) | 1254 |
| BstX2I | RGATCY | 5 cut(s) | 64, 178, 770, 1165, 1580 |
| BstYI | RGATCY | 5 cut(s) | 64, 178, 770, 1165, 1580 |
| Bsu15I | ATCGAT | 1 cut(s) | 207 |
| BsuRI | GGCC | 1 cut(s) | 975 |
| BsuTUI | ATCGAT | 1 cut(s) | 207 |
| BtgI | CCRYGG | 1 cut(s) | 1292 |
| BtgZI | GCGATG | 2 cut(s) | 1583, 1611 |
| BtrI | CACGTC | 1 cut(s) | 1645 |
| BtsCI | GGATG | 7 cut(s) | 225, 564, 937, 1185, 1264, 1341, 1375 |
| BtsIMutI | CAGTG | 2 cut(s) | 144, 1416 |
| BtuMI | TCGCGA | 1 cut(s) | 268 |
| BveI | ACCTGC | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 6 cut(s) | 18, 270, 710, 717, 1466, 1566 |
| CfoI | GCGC | 1 cut(s) | 274 |
| Cfr10I | RCCGGY | 1 cut(s) | 1061 |
| Cfr13I | GGNCC | 2 cut(s) | 915, 973 |
| ClaI | ATCGAT | 1 cut(s) | 207 |
| CseI | GACGC | 1 cut(s) | 321 |
| Csp6I | GTAC | 4 cut(s) | 344, 640, 999, 1349 |
| CviQI | GTAC | 4 cut(s) | 344, 640, 999, 1349 |
| DdeI | CTNAG | 5 cut(s) | 44, 292, 582, 1200, 1422 |
| DraI | TTTAAA | 1 cut(s) | 616 |
| Eam1104I | CTCTTC | 3 cut(s) | 1475, 1671, 1756 |
| EarI | CTCTTC | 3 cut(s) | 1475, 1671, 1756 |
| EciI | GGCGGA | 1 cut(s) | 1133 |
| Eco130I | CCWWGG | 4 cut(s) | 815, 841, 1292, 1728 |
| Eco31I | GGTCTC | 1 cut(s) | 1199 |
| Eco47I | GGWCC | 1 cut(s) | 915 |
| Eco47III | AGCGCT | 1 cut(s) | 273 |
| EcoO109I | RGGNCCY | 1 cut(s) | 973 |
| EcoRI | GAATTC | 1 cut(s) | 824 |
| EcoRII | CCWGG | 1 cut(s) | 909 |
| EcoT14I | CCWWGG | 4 cut(s) | 815, 841, 1292, 1728 |
| ErhI | CCWWGG | 4 cut(s) | 815, 841, 1292, 1728 |
| Esp3I | CGTCTC | 1 cut(s) | 1602 |
| Fnu4HI | GCNGC | 4 cut(s) | 14, 713, 1536, 1662 |
| FokI | GGATG | 7 cut(s) | 232, 571, 944, 1192, 1271, 1348, 1382 |
| Fsp4HI | GCNGC | 4 cut(s) | 14, 713, 1536, 1662 |
| FspBI | CTAG | 4 cut(s) | 768, 780, 816, 1810 |
| GlaI | GCGC | 1 cut(s) | 273 |
| GluI | GCNGC | 4 cut(s) | 14, 713, 1536, 1662 |
| GsaI | CCCAGC | 1 cut(s) | 1542 |
| HaeII | RGCGCY | 1 cut(s) | 275 |
| HaeIII | GGCC | 1 cut(s) | 975 |
| HapII | CCGG | 2 cut(s) | 918, 1062 |
| HgaI | GACGC | 1 cut(s) | 321 |
| HhaI | GCGC | 1 cut(s) | 274 |
| Hin1I | GRCGYC | 1 cut(s) | 332 |
| Hin6I | GCGC | 1 cut(s) | 272 |
| HinP1I | GCGC | 1 cut(s) | 272 |
| HinfI | GANTC | 4 cut(s) | 501, 848, 862, 1003 |
| HpaII | CCGG | 2 cut(s) | 918, 1062 |
| HphI | GGTGA | 5 cut(s) | 44, 256, 716, 844, 857 |
| Hpy166II | GTNNAC | 2 cut(s) | 605, 806 |
| Hpy188I | TCNGA | 5 cut(s) | 493, 555, 944, 1423, 1786 |
| Hpy188III | TCNNGA | 8 cut(s) | 68, 80, 267, 768, 780, 1268, 1586, 1675 |
| Hpy8I | GTNNAC | 2 cut(s) | 605, 806 |
| Hpy99I | CGWCG | 1 cut(s) | 1507 |
| HpyAV | CCTTC | 2 cut(s) | 1475, 1703 |
| HpyCH4III | ACNGT | 7 cut(s) | 343, 609, 880, 1074, 1555, 1687, 1778 |
| HpyCH4IV | ACGT | 3 cut(s) | 750, 1023, 1644 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 26, 329, 1544, 1724 |
| HpyF3I | CTNAG | 5 cut(s) | 44, 292, 582, 1200, 1422 |
| HpySE526I | ACGT | 3 cut(s) | 750, 1023, 1644 |
| Hsp92I | GRCGYC | 1 cut(s) | 332 |
| HspAI | GCGC | 1 cut(s) | 272 |
| KpnI | GGTACC | 1 cut(s) | 1352 |
| LguI | GCTCTTC | 2 cut(s) | 1475, 1671 |
| LmnI | GCTCC | 2 cut(s) | 320, 665 |
| Lsp1109I | GCAGC | 3 cut(s) | 724, 1522, 1673 |
| LweI | GCATC | 5 cut(s) | 16, 1249, 1326, 1360, 1640 |
| MaeI | CTAG | 4 cut(s) | 768, 780, 816, 1810 |
| MaeII | ACGT | 3 cut(s) | 750, 1023, 1644 |
| MaeIII | GTNAC | 3 cut(s) | 50, 920, 1761 |
| MboII | GAAGA | 9 cut(s) | 110, 440, 767, 1225, 1259, 1280, 1462, 1658, 1743 |
| MfeI | CAATTG | 2 cut(s) | 36, 1241 |
| MflI | RGATCY | 5 cut(s) | 64, 178, 770, 1165, 1580 |
| MlyI | GAGTC | 1 cut(s) | 1012 |
| MmeI | TCCRAC | 2 cut(s) | 208, 1426 |
| MnlI | CCTC | 9 cut(s) | 210, 240, 346, 549, 733, 1114, 1203, 1326, 1347 |
| MseI | TTAA | 4 cut(s) | 173, 615, 978, 1404 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1024, 1334 |
| MspCI | CTTAAG | 1 cut(s) | 1403 |
| MspI | CCGG | 2 cut(s) | 918, 1062 |
| MspR9I | CCNGG | 1 cut(s) | 911 |
| MunI | CAATTG | 2 cut(s) | 36, 1241 |
| Mva1269I | GAATGC | 1 cut(s) | 764 |
| MvaI | CCWGG | 1 cut(s) | 911 |
| MvnI | CGCG | 1 cut(s) | 268 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 26, 329, 1544, 1724 |
| NcoI | CCATGG | 1 cut(s) | 1292 |
| NlaIV | GGNNCC | 5 cut(s) | 180, 667, 916, 974, 1350 |
| NmuCI | GTSAC | 1 cut(s) | 50 |
| NruI | TCGCGA | 1 cut(s) | 268 |
| NspI | RCATGY | 2 cut(s) | 1322, 1468 |
| PaeI | GCATGC | 1 cut(s) | 1468 |
| PciSI | GCTCTTC | 2 cut(s) | 1475, 1671 |
| PctI | GAATGC | 1 cut(s) | 764 |
| PfeI | GAWTC | 3 cut(s) | 501, 848, 862 |
| PkrI | GCNGC | 4 cut(s) | 15, 714, 1537, 1663 |
| PleI | GAGTC | 1 cut(s) | 1011 |
| PpsI | GAGTC | 1 cut(s) | 1011 |
| Ppu21I | YACGTR | 1 cut(s) | 1024 |
| PshAI | GACNNNNGTC | 1 cut(s) | 75 |
| PsiI | TTATAA | 2 cut(s) | 486, 798 |
| Psp1406I | AACGTT | 1 cut(s) | 750 |
| Psp6I | CCWGG | 1 cut(s) | 909 |
| PspFI | CCCAGC | 1 cut(s) | 1538 |
| PspGI | CCWGG | 1 cut(s) | 909 |
| PspN4I | GGNNCC | 5 cut(s) | 180, 667, 916, 974, 1350 |
| PspPI | GGNCC | 2 cut(s) | 915, 973 |
| PsuI | RGATCY | 5 cut(s) | 64, 178, 770, 1165, 1580 |
| RruI | TCGCGA | 1 cut(s) | 268 |
| RsaI | GTAC | 4 cut(s) | 345, 641, 1000, 1350 |
| RsaNI | GTAC | 4 cut(s) | 344, 640, 999, 1349 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1024, 1334 |
| SapI | GCTCTTC | 2 cut(s) | 1475, 1671 |
| SaqAI | TTAA | 4 cut(s) | 173, 615, 978, 1404 |
| SatI | GCNGC | 4 cut(s) | 14, 713, 1536, 1662 |
| Sau96I | GGNCC | 2 cut(s) | 915, 973 |
| SchI | GAGTC | 1 cut(s) | 1012 |
| ScrFI | CCNGG | 1 cut(s) | 911 |
| SfaNI | GCATC | 5 cut(s) | 16, 1249, 1326, 1360, 1640 |
| SfcI | CTRYAG | 1 cut(s) | 402 |
| SinI | GGWCC | 1 cut(s) | 915 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1024, 1334 |
| SmlI | CTYRAG | 2 cut(s) | 1403, 1586 |
| SmoI | CTYRAG | 2 cut(s) | 1403, 1586 |
| SphI | GCATGC | 1 cut(s) | 1468 |
| SsiI | CCGC | 2 cut(s) | 242, 1118 |
| SspI | AATATT | 1 cut(s) | 548 |
| SspMI | CTAG | 4 cut(s) | 768, 780, 816, 1810 |
| StyD4I | CCNGG | 1 cut(s) | 909 |
| StyI | CCWWGG | 4 cut(s) | 815, 841, 1292, 1728 |
| TaaI | ACNGT | 7 cut(s) | 343, 609, 880, 1074, 1555, 1687, 1778 |
| TaiI | ACGT | 3 cut(s) | 753, 1026, 1647 |
| TaqI | TCGA | 6 cut(s) | 207, 565, 1502, 1676, 1769, 1797 |
| TatI | WGTACW | 2 cut(s) | 343, 639 |
| TfiI | GAWTC | 3 cut(s) | 501, 848, 862 |
| Tru1I | TTAA | 4 cut(s) | 173, 615, 978, 1404 |
| Tru9I | TTAA | 4 cut(s) | 173, 615, 978, 1404 |
| TscAI | CASTG | 2 cut(s) | 144, 1416 |
| TseFI | GTSAC | 1 cut(s) | 50 |
| TseI | GCWGC | 4 cut(s) | 13, 712, 1535, 1661 |
| Tsp45I | GTSAC | 1 cut(s) | 50 |
| TspGWI | ACGGA | 2 cut(s) | 369, 400 |
| TspRI | CASTG | 2 cut(s) | 144, 1416 |
| Vha464I | CTTAAG | 1 cut(s) | 1403 |
| VpaK11BI | GGWCC | 1 cut(s) | 915 |
| XapI | RAATTY | 8 cut(s) | 118, 129, 312, 358, 526, 824, 982, 1204 |
| XbaI | TCTAGA | 2 cut(s) | 767, 779 |
| XceI | RCATGY | 2 cut(s) | 1322, 1468 |
| XmaJI | CCTAGG | 1 cut(s) | 815 |
| XspI | CTAG | 4 cut(s) | 768, 780, 816, 1810 |