Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0008125

Physical Location & Seq

Genomic Coordinates Forward (+)

11234631 .. 11238815

Gene Structure 4185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG053500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAATCACTCAAAGGAGGAGGTGTTCCGCATCGAAATGAGCTCTCACCCAGATATAGTTCACGCTGTCGAAAATGCTAACGCGCCACCCGGAGAAGTAAATGGAACAAAGAAGAAATGGGAAACAATGCTGCTTTCAGTTTCATTTTGGAATAAGATATCTGTGCTTGCATGTACGATTGCAGTCTCAACGGATCCTTTGTTTTTTTACATTGCATTCTTTGATCGCAAGAAAATGTGCCTCTATATGGACAAAAGGATGAGGAACGCAGTCCTCATTACGCGATCAGTCACAGATATCACGTTCCTATTTCATATTGTATATCAAATTCGTGAAGCTGTGAAAGCAGCGGCCTATGTGTCCAAGGCCAAGCTGGTACAGAGAGGCCACTCAAAACTCTTCAACTGGTTTGGACACGCTAAGGCAATAACTAAGAAGTTGTCATGGAGCTCTGTCCTAACTGACATTCTCGCTGTTCTTCCAATTCCACATGTGCTGATTTTAGTTATGTTTTATGCCCCCAATTATGGATTTTCAGAGAACAAAATATCTCTGAATTATATGCTTCTCGCGCAATATGTTCCAAGGGTGTATCGAATCTTCATCTCGTCTAAGCTAATTAGAAAAAATAGTAGCATGTGGCTCAAAGCTGCATTCTATTTTTTTATGTACATCCTCTCAAGTCATGTAATTGGAGCATTTTGGCACTTTAGTTCTGTTCAAATCGAAGTCGTATGTTGGCAATGGGCCCTCGGAGAGAAACGGAAAATGACATGTGATGACCCTCCCTTAACTGTAAGCAGTCAAAAGAACATTACTGCAACTTGCATAAATGGGACGGCGGAGACATTCCTCTTTAATTATGGACCCTTTTCGGAAACAATTAAAACCGGCTTCACAGGACGTGCAACATTCCGCGGAAAGTTAATTTACTTTTTGTGGTGGGGACTTAAAAATCTGAGTAACTTTGGTACAGACATCGATGCAACTGTCTACGCTTGGAATAATATCTTTGCAATTTTTGTTTCTGGCATTGGCTTGCAATGTATGCAATCCTCGGAGCAAAATAAAGTGGCAACTGATACGGTACAGATGAAAGAGCAAGAAGTACAAGAATGGATGGACAAAAATCGTCTCCCTGAGAAGTGCAGAGACGCTGAGAAGCTGAGGATAGAGATCATGAAAAAGATAACAGAAAACTTGAAAGACGAAAAAAATGCAGAAGTACAAACCCTGTTCTCCCTTCTTCCCTGGAATACCGTAAAAGATCTCAAGCTTGCTATCTGCATGAGTATGCTAAAGAAAGTAGGAAGGATCGAAAATATGGATGAAAGAGGATTGAGAGTCATCTGCCACTATCTCAAGCCAGTGACCTATACTGAGAAATCAATTGCTTTTCGAATGGGAGAACCACTTGACAGCATGTTCTTTATCATGGAAGGCATTATGTTGATATACCCGACTAGTACTAGTACTACTACTACTGATCATCAAGTTGGAAGAGCAAATATAGGTTCCCCTTCAACAATCCGCGGCTTCCTAGAGAACGGTGATGTTTATGGAGCTGACCAACTTCTGAGTTGGGCATCACCACCGGACATGTCCTATGTCTCTTACGCAGACCTTCCTATCTTAACCGAAAATGTAAAATGTCTTTCAGAAGTAGAAGGGTTTGTTCTCACTGCCAAGGACTTGAAAAATGTACTCTCGGTGTACAAGTTACAGGGGAATTACAATAGTTCCAGCCATCTGGTGAAGGTGGAACGTTCTATATCAAGAGGAACATCAATGATTCGTCGTAACCGCATTAATCCTACTCCACGGCCAGGCACAGATCAGGGCGGGAATGAGGAAACAGATATTCAAGATTCAAATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans

Protein Analysis

626

Amino Acids

71.39

Weight (kDa)

9.05

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008125)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g36500 FvH4_4g04180
rosa_chinensis	RchiOBHm_Chr4g0394641 RchiOBHm_Chr4g0394671
rosa_laevigata	RLG00000009677 RLG00000009680 RLG00000009681 RLG00000009682
rosa_multiflora	Rmu_sc0005424.1_g000006 Rmu_sc0005424.1_g000007 Rmu_sc0006945.1_g000031 Rmu_sc0006945.1_g000032
rosa_roxburghii	Rroxscaffold_4G00304330 Rroxscaffold_5G00339680
rosa_rugosa	Rorug03G0362900.1 Rorug03G0363000.1 Rorug03G0363400.1
rosa_samantha	Rh4AG053500 Rh4AG054100 Rh4BG051500 Rh4BG051800
rosa_wichuraiana	Rw1G019920 Rw4G004170 Rw4G004310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	993
AccII	CGCG	5 cut(s)	83, 283, 572, 918, 1533
AciI	CCGC	9 cut(s)	28, 350, 842, 916, 918, 1531, 1533, 1804, 1842
AclI	AACGTT	1 cut(s)	1765
AclWI	GGATC	3 cut(s)	188, 201, 1322
AcoI	YGGCCR	1 cut(s)	1823
AcsI	RAATTY	1 cut(s)	327
AfiI	CCNNNNNNNGG	3 cut(s)	247, 527, 1826
AflIII	ACRYGT	3 cut(s)	490, 773, 1599
AgsI	TTSAA	7 cut(s)	403, 722, 1204, 1524, 1696, 1865, 1872
AhlI	ACTAGT	2 cut(s)	1463, 1469
AjiI	CACGTC	1 cut(s)	905
AjnI	CCWGG	2 cut(s)	1250, 1825
AloI	GAACNNNNNNTCC	2 cut(s)	8, 40
AluBI	AGCT	9 cut(s)	42, 338, 373, 450, 616, 650, 1165, 1276, 1565
AluI	AGCT	9 cut(s)	42, 338, 373, 450, 616, 650, 1165, 1276, 1565
Alw21I	GWGCWC	2 cut(s)	44, 452
Alw26I	GTCTC	5 cut(s)	190, 839, 1139, 1146, 1615
AlwI	GGATC	3 cut(s)	188, 201, 1322
AoxI	GGCC	5 cut(s)	351, 366, 385, 747, 1823
ApaI	GGGCCC	1 cut(s)	751
ApeKI	GCWGC	3 cut(s)	130, 347, 650
ApoI	RAATTY	1 cut(s)	327
AseI	ATTAAT	1 cut(s)	1809
AspLEI	GCGC	2 cut(s)	85, 574
AspS9I	GGNCC	3 cut(s)	747, 748, 866
AsuC2I	CCSGG	1 cut(s)	90
AsuHPI	GGTGA	4 cut(s)	38, 1562, 1581, 1765
AsuII	TTCGAA	1 cut(s)	1399
AvaII	GGWCC	1 cut(s)	866
BaeGI	GKGCMC	1 cut(s)	751
BamHI	GGATCC	1 cut(s)	193
BanII	GRGCYC	3 cut(s)	44, 452, 751
BarI	GAAGNNNNNNTAC	2 cut(s)	584, 616
Bbv12I	GWGCWC	2 cut(s)	44, 452
BbvCI	CCTCAGC	1 cut(s)	1166
BbvI	GCAGC	3 cut(s)	117, 359, 637
BccI	CCATC	2 cut(s)	1114, 1755
BceAI	ACGGC	2 cut(s)	855, 1838
BcgI	CGANNNNNNTGC	2 cut(s)	1199, 1233
BciT130I	CCWGG	2 cut(s)	1252, 1827
BclI	TGATCA	1 cut(s)	1486
BcnI	CCSGG	1 cut(s)	90
BcoDI	GTCTC	5 cut(s)	190, 839, 1139, 1146, 1615
BcuI	ACTAGT	2 cut(s)	1463, 1469
BfaI	CTAG	3 cut(s)	1464, 1470, 1541
BglII	AGATCT	1 cut(s)	1267
BisI	GCNGC	5 cut(s)	131, 348, 351, 651, 1534
BlsI	GCNGC	5 cut(s)	132, 349, 352, 652, 1535
BmcAI	AGTACT	2 cut(s)	1468, 1474
Bme1390I	CCNGG	3 cut(s)	90, 1252, 1827
Bme18I	GGWCC	1 cut(s)	866
BmgBI	CACGTC	1 cut(s)	905
BmgT120I	GGNCC	3 cut(s)	747, 748, 866
BmiI	GGNNCC	4 cut(s)	195, 749, 868, 1516
BmrFI	CCNGG	3 cut(s)	90, 1252, 1827
BmsI	GCATC	3 cut(s)	39, 973, 1595
Bpu10I	CCTNAGC	2 cut(s)	420, 1166
Bpu14I	TTCGAA	1 cut(s)	1399
BpuEI	CTTGAG	3 cut(s)	664, 1256, 1346
BpuMI	CCSGG	1 cut(s)	90
Bsa29I	ATCGAT	1 cut(s)	981
BsaBI	GATNNNNATC	1 cut(s)	1175
BsaJI	CCNNGG	9 cut(s)	363, 584, 751, 916, 1056, 1250, 1531, 1686, 1820
BsaWI	WCCGGW	1 cut(s)	1594
BsaXI	ACNNNNNCTCC	2 cut(s)	8, 38
Bsc4I	CCNNNNNNNGG	3 cut(s)	247, 527, 1826
Bse118I	RCCGGY	1 cut(s)	890
Bse1I	ACTGG	2 cut(s)	410, 1367
Bse3DI	GCAATG	3 cut(s)	210, 749, 1049
Bse8I	GATNNNNATC	1 cut(s)	1175
BseBI	CCWGG	2 cut(s)	1252, 1827
BseCI	ATCGAT	1 cut(s)	981
BseDI	CCNNGG	9 cut(s)	363, 584, 751, 916, 1056, 1250, 1531, 1686, 1820
BseGI	GGATG	4 cut(s)	264, 672, 1125, 1333
BseJI	GATNNNNATC	1 cut(s)	1175
BseLI	CCNNNNNNNGG	3 cut(s)	247, 527, 1826
BseMI	GCAATG	3 cut(s)	210, 749, 1049
BseMII	CTCAG	6 cut(s)	950, 1131, 1149, 1157, 1371, 1568
BseNI	ACTGG	2 cut(s)	410, 1367
BseRI	GAGGAG	1 cut(s)	32
BseSI	GKGCMC	1 cut(s)	751
BseXI	GCAGC	3 cut(s)	117, 359, 637
BsgI	GTGCAG	1 cut(s)	1168
Bsh1236I	CGCG	5 cut(s)	83, 283, 572, 918, 1533
BshFI	GGCC	5 cut(s)	353, 368, 387, 749, 1825
BshVI	ATCGAT	1 cut(s)	981
BsiHKAI	GWGCWC	2 cut(s)	44, 452
BsiSI	CCGG	3 cut(s)	90, 891, 1595
BslFI	GGGAC	2 cut(s)	850, 960
BslI	CCNNNNNNNGG	3 cut(s)	247, 527, 1826
BsmAI	GTCTC	5 cut(s)	190, 839, 1139, 1146, 1615
BsmBI	CGTCTC	2 cut(s)	1139, 1146
BsmFI	GGGAC	2 cut(s)	850, 960
BsmI	GAATGC	2 cut(s)	215, 653
BsnI	GGCC	5 cut(s)	353, 368, 387, 749, 1825
Bsp119I	TTCGAA	1 cut(s)	1399
Bsp120I	GGGCCC	1 cut(s)	747
Bsp1286I	GDGCHC	3 cut(s)	44, 452, 751
Bsp1407I	TGTACA	2 cut(s)	669, 1713
Bsp143I	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
BspACI	CCGC	9 cut(s)	28, 350, 842, 916, 918, 1531, 1533, 1804, 1842
BspANI	GGCC	5 cut(s)	353, 368, 387, 749, 1825
BspCNI	CTCAG	6 cut(s)	951, 1132, 1150, 1158, 1372, 1569
BspDI	ATCGAT	1 cut(s)	981
BspFNI	CGCG	5 cut(s)	83, 283, 572, 918, 1533
BspHI	TCATGA	1 cut(s)	1179
BspLI	GGNNCC	4 cut(s)	195, 749, 868, 1516
BspPI	GGATC	3 cut(s)	188, 201, 1322
BspQI	GCTCTTC	1 cut(s)	1495
BspT104I	TTCGAA	1 cut(s)	1399
BsrDI	GCAATG	3 cut(s)	210, 749, 1049
BsrFI	RCCGGY	1 cut(s)	890
BsrGI	TGTACA	2 cut(s)	669, 1713
BsrI	ACTGG	2 cut(s)	410, 1367
BssAI	RCCGGY	1 cut(s)	890
BssECI	CCNNGG	9 cut(s)	363, 584, 751, 916, 1056, 1250, 1531, 1686, 1820
BssMI	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
BssT1I	CCWWGG	3 cut(s)	363, 584, 1686
Bst2UI	CCWGG	2 cut(s)	1252, 1827
Bst4CI	ACNGT	5 cut(s)	796, 991, 1087, 1261, 1550
Bst6I	CTCTTC	2 cut(s)	404, 1495
BstAPI	GCANNNNNTGC	1 cut(s)	1048
BstAUI	TGTACA	2 cut(s)	669, 1713
BstBI	TTCGAA	1 cut(s)	1399
BstC8I	GCNNGC	3 cut(s)	168, 1040, 1278
BstDEI	CTNAG	9 cut(s)	420, 432, 612, 959, 1140, 1158, 1166, 1380, 1577
BstDSI	CCRYGG	3 cut(s)	916, 1531, 1820
BstF5I	GGATG	4 cut(s)	264, 672, 1125, 1333
BstFNI	CGCG	5 cut(s)	83, 283, 572, 918, 1533
BstHHI	GCGC	2 cut(s)	85, 574
BstKTI	GATC	8 cut(s)	196, 226, 287, 1179, 1270, 1317, 1489, 1837
BstMAI	GTCTC	5 cut(s)	190, 839, 1139, 1146, 1615
BstMBI	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
BstMWI	GCNNNNNNNGC	3 cut(s)	344, 571, 1048
BstNI	CCWGG	2 cut(s)	1252, 1827
BstNSI	RCATGY	6 cut(s)	174, 494, 640, 777, 1426, 1603
BstSCI	CCNGG	3 cut(s)	88, 1250, 1825
BstSLI	GKGCMC	1 cut(s)	751
BstUI	CGCG	5 cut(s)	83, 283, 572, 918, 1533
BstV1I	GCAGC	3 cut(s)	117, 359, 637
BstX2I	RGATCY	2 cut(s)	193, 1267
BstXI	CCANNNNNNTGG	1 cut(s)	1750
BstYI	RGATCY	2 cut(s)	193, 1267
Bsu15I	ATCGAT	1 cut(s)	981
BsuRI	GGCC	5 cut(s)	353, 368, 387, 749, 1825
BsuTUI	ATCGAT	1 cut(s)	981
BtgI	CCRYGG	3 cut(s)	916, 1531, 1820
BtrI	CACGTC	1 cut(s)	905
BtsCI	GGATG	4 cut(s)	264, 672, 1125, 1333
BtsI	GCAGTG	1 cut(s)	1680
BtsIMutI	CAGTG	2 cut(s)	1374, 1680
Cac8I	GCNNGC	3 cut(s)	168, 1040, 1278
CciI	TCATGA	1 cut(s)	1179
CfoI	GCGC	2 cut(s)	85, 574
Cfr10I	RCCGGY	1 cut(s)	890
Cfr13I	GGNCC	3 cut(s)	747, 748, 866
Cfr42I	CCGCGG	2 cut(s)	919, 1534
ClaI	ATCGAT	1 cut(s)	981
CseI	GACGC	1 cut(s)	1163
DdeI	CTNAG	9 cut(s)	420, 432, 612, 959, 1140, 1158, 1166, 1380, 1577
DpnI	GATC	8 cut(s)	195, 225, 286, 1178, 1269, 1316, 1488, 1836
DpnII	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
EaeI	YGGCCR	1 cut(s)	1823
Eam1104I	CTCTTC	2 cut(s)	404, 1495
EarI	CTCTTC	2 cut(s)	404, 1495
EciI	GGCGGA	1 cut(s)	857
Ecl136II	GAGCTC	2 cut(s)	42, 450
Eco130I	CCWWGG	3 cut(s)	363, 584, 1686
Eco24I	GRGCYC	3 cut(s)	44, 452, 751
Eco32I	GATATC	2 cut(s)	159, 298
Eco47I	GGWCC	1 cut(s)	866
Eco53kI	GAGCTC	2 cut(s)	42, 450
EcoICRI	GAGCTC	2 cut(s)	42, 450
EcoO109I	RGGNCCY	1 cut(s)	748
EcoRII	CCWGG	2 cut(s)	1250, 1825
EcoRV	GATATC	2 cut(s)	159, 298
EcoT14I	CCWWGG	3 cut(s)	363, 584, 1686
EcoT38I	GRGCYC	3 cut(s)	44, 452, 751
ErhI	CCWWGG	3 cut(s)	363, 584, 1686
Esp3I	CGTCTC	2 cut(s)	1139, 1146
FaqI	GGGAC	2 cut(s)	850, 960
FauI	CCCGC	1 cut(s)	1835
FbaI	TGATCA	1 cut(s)	1486
FblI	GTMKAC	1 cut(s)	993
Fnu4HI	GCNGC	5 cut(s)	131, 348, 351, 651, 1534
FokI	GGATG	4 cut(s)	271, 659, 1132, 1340
FriOI	GRGCYC	3 cut(s)	44, 452, 751
Fsp4HI	GCNGC	5 cut(s)	131, 348, 351, 651, 1534
FspBI	CTAG	3 cut(s)	1464, 1470, 1541
GlaI	GCGC	2 cut(s)	84, 573
GluI	GCNGC	5 cut(s)	131, 348, 351, 651, 1534
HaeIII	GGCC	5 cut(s)	353, 368, 387, 749, 1825
HapII	CCGG	3 cut(s)	90, 891, 1595
HgaI	GACGC	1 cut(s)	1163
HhaI	GCGC	2 cut(s)	85, 574
Hin6I	GCGC	2 cut(s)	83, 572
HinP1I	GCGC	2 cut(s)	83, 572
HindIII	AAGCTT	1 cut(s)	1274
HinfI	GANTC	5 cut(s)	4, 597, 1344, 1792, 1868
HpaII	CCGG	3 cut(s)	90, 891, 1595
HphI	GGTGA	4 cut(s)	38, 1562, 1581, 1765
Hpy166II	GTNNAC	3 cut(s)	61, 994, 1714
Hpy188I	TCNGA	8 cut(s)	538, 555, 755, 877, 960, 1060, 1578, 1660
Hpy188III	TCNNGA	4 cut(s)	332, 1180, 1776, 1865
Hpy8I	GTNNAC	3 cut(s)	61, 994, 1714
Hpy99I	CGWCG	1 cut(s)	1800
HpyAV	CCTTC	7 cut(s)	1253, 1305, 1433, 1530, 1634, 1661, 1750
HpyCH4III	ACNGT	5 cut(s)	796, 991, 1087, 1261, 1550
HpyCH4IV	ACGT	3 cut(s)	302, 904, 1765
HpyF10VI	GCNNNNNNNGC	3 cut(s)	344, 571, 1048
HpyF3I	CTNAG	9 cut(s)	420, 432, 612, 959, 1140, 1158, 1166, 1380, 1577
HpySE526I	ACGT	3 cut(s)	302, 904, 1765
HspAI	GCGC	2 cut(s)	83, 572
Ksp22I	TGATCA	1 cut(s)	1486
KspI	CCGCGG	2 cut(s)	919, 1534
Kzo9I	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
LguI	GCTCTTC	1 cut(s)	1495
LmnI	GCTCC	4 cut(s)	447, 695, 1060, 1562
Lsp1109I	GCAGC	3 cut(s)	117, 359, 637
LweI	GCATC	3 cut(s)	39, 973, 1595
MaeI	CTAG	3 cut(s)	1464, 1470, 1541
MaeII	ACGT	3 cut(s)	302, 904, 1765
MaeIII	GTNAC	5 cut(s)	289, 962, 1369, 1719, 1799
MalI	GATC	8 cut(s)	195, 225, 286, 1178, 1269, 1316, 1488, 1836
MboI	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
MboII	GAAGA	6 cut(s)	124, 391, 470, 592, 1238, 1512
MfeI	CAATTG	1 cut(s)	1389
MflI	RGATCY	2 cut(s)	193, 1267
MhlI	GDGCHC	3 cut(s)	44, 452, 751
MlyI	GAGTC	1 cut(s)	1353
MmeI	TCCRAC	1 cut(s)	1477
MseI	TTAA	7 cut(s)	791, 858, 885, 926, 951, 1634, 1809
MslI	CAYNNNNRTG	2 cut(s)	35, 1292
MspA1I	CMGCKG	3 cut(s)	350, 918, 1533
MspI	CCGG	3 cut(s)	90, 891, 1595
MspR9I	CCNGG	3 cut(s)	90, 1252, 1827
MunI	CAATTG	1 cut(s)	1389
Mva1269I	GAATGC	2 cut(s)	215, 653
MvaI	CCWGG	2 cut(s)	1252, 1827
MvnI	CGCG	5 cut(s)	83, 283, 572, 918, 1533
MwoI	GCNNNNNNNGC	3 cut(s)	344, 571, 1048
NciI	CCSGG	1 cut(s)	90
NdeII	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
NlaIV	GGNNCC	4 cut(s)	195, 749, 868, 1516
NmuCI	GTSAC	2 cut(s)	289, 1369
NspI	RCATGY	6 cut(s)	174, 494, 640, 777, 1426, 1603
NspV	TTCGAA	1 cut(s)	1399
PagI	TCATGA	1 cut(s)	1179
PciI	ACATGT	3 cut(s)	490, 773, 1599
PciSI	GCTCTTC	1 cut(s)	1495
PctI	GAATGC	2 cut(s)	215, 653
PfeI	GAWTC	4 cut(s)	4, 597, 1792, 1868
PkrI	GCNGC	5 cut(s)	132, 349, 352, 652, 1535
PleI	GAGTC	1 cut(s)	1352
PpsI	GAGTC	1 cut(s)	1352
PscI	ACATGT	3 cut(s)	490, 773, 1599
PshBI	ATTAAT	1 cut(s)	1809
Psp124BI	GAGCTC	2 cut(s)	44, 452
Psp1406I	AACGTT	1 cut(s)	1765
Psp6I	CCWGG	2 cut(s)	1250, 1825
PspGI	CCWGG	2 cut(s)	1250, 1825
PspN4I	GGNNCC	4 cut(s)	195, 749, 868, 1516
PspOMI	GGGCCC	1 cut(s)	747
PspPI	GGNCC	3 cut(s)	747, 748, 866
PsuI	RGATCY	2 cut(s)	193, 1267
RseI	CAYNNNNRTG	2 cut(s)	35, 1292
SacI	GAGCTC	2 cut(s)	44, 452
SacII	CCGCGG	2 cut(s)	919, 1534
SapI	GCTCTTC	1 cut(s)	1495
SaqAI	TTAA	7 cut(s)	791, 858, 885, 926, 951, 1634, 1809
SatI	GCNGC	5 cut(s)	131, 348, 351, 651, 1534
Sau3AI	GATC	8 cut(s)	193, 223, 284, 1176, 1267, 1314, 1486, 1834
Sau96I	GGNCC	3 cut(s)	747, 748, 866
ScaI	AGTACT	2 cut(s)	1468, 1474
SchI	GAGTC	1 cut(s)	1353
ScrFI	CCNGG	3 cut(s)	90, 1252, 1827
SduI	GDGCHC	3 cut(s)	44, 452, 751
SfaNI	GCATC	3 cut(s)	39, 973, 1595
Sfr303I	CCGCGG	2 cut(s)	919, 1534
SfuI	TTCGAA	1 cut(s)	1399
SgrBI	CCGCGG	2 cut(s)	919, 1534
SinI	GGWCC	1 cut(s)	866
SmiMI	CAYNNNNRTG	2 cut(s)	35, 1292
SmlI	CTYRAG	3 cut(s)	679, 1271, 1361
SmoI	CTYRAG	3 cut(s)	679, 1271, 1361
SpeI	ACTAGT	2 cut(s)	1463, 1469
SsiI	CCGC	9 cut(s)	28, 350, 842, 916, 918, 1531, 1533, 1804, 1842
SspMI	CTAG	3 cut(s)	1464, 1470, 1541
SstI	GAGCTC	2 cut(s)	44, 452
StyD4I	CCNGG	3 cut(s)	88, 1250, 1825
StyI	CCWWGG	3 cut(s)	363, 584, 1686
TaaI	ACNGT	5 cut(s)	796, 991, 1087, 1261, 1550
TaiI	ACGT	3 cut(s)	305, 907, 1768
TaqI	TCGA	7 cut(s)	33, 69, 595, 726, 981, 1317, 1399
TatI	WGTACW	7 cut(s)	669, 1108, 1225, 1466, 1472, 1702, 1713
TauI	GCSGC	2 cut(s)	353, 1536
TfiI	GAWTC	4 cut(s)	4, 597, 1792, 1868
Tru1I	TTAA	7 cut(s)	791, 858, 885, 926, 951, 1634, 1809
Tru9I	TTAA	7 cut(s)	791, 858, 885, 926, 951, 1634, 1809
TscAI	CASTG	2 cut(s)	1374, 1687
TseFI	GTSAC	2 cut(s)	289, 1369
TseI	GCWGC	3 cut(s)	130, 347, 650
Tsp45I	GTSAC	2 cut(s)	289, 1369
TspDTI	ATGAA	7 cut(s)	17, 132, 302, 592, 1109, 1196, 1344
TspGWI	ACGGA	2 cut(s)	206, 778
TspRI	CASTG	2 cut(s)	1374, 1687
VpaK11BI	GGWCC	1 cut(s)	866
VspI	ATTAAT	1 cut(s)	1809
XapI	RAATTY	1 cut(s)	327
XceI	RCATGY	6 cut(s)	174, 494, 640, 777, 1426, 1603
XcmI	CCANNNNNNNNNTGG	1 cut(s)	370
XmiI	GTMKAC	1 cut(s)	993
XspI	CTAG	3 cut(s)	1464, 1470, 1541
ZrmI	AGTACT	2 cut(s)	1468, 1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.