Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007278

Physical Location & Seq

Genomic Coordinates Forward (+)

49662182 .. 49664337

Gene Structure 2156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019283

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCACTTCCCTCCATAGCCAGAAGGCTGCGAACTAAACACCTCCTCTGCCTATCACTCACTCTACTCCACCACCACCACCACCACCCCATCTCTACCTCAACCTATTCTTCACTTTCTCTCCACCACCATCTCTTTCAGCCATTTCATCCAACACTTATCGTCCCATCCCAATCCCCTCGCCATTTCTCTACTGTCCAACCCTTCTCCGCCGAAATCCCCCACCACCCATTAGGCTTCAATGGCCAGCGTTTCAACACAGACCACTCCCACAACTTGGGTCTCACCCAGTTTCTTGAATTGCTCACAAGTGCCTCCGGTTTGGCCTCTGAAGCCGACGCCATGGCTTTTCTCGACAAGTCGGGCGTCGAGCCGAAGCGAGATACGGTCTTTCAGGCGATTTGGGAGCTGAGGGGAGATTGGAAGTTGGCGTTTTTGGGTTTCAAATGGGGTGAGAAGTGGGGCTGTTGCGATGAAGAGGCGTGTAGTTTGATGGTTTGGGTTTTGGGGAGTCATAGAAAGTTTACTACTGCTTGGTGTTTGATACGGGACTTGAATCAGGCTTTGATTGATACGCGCCGTGCAATGCTTATAATGATTGATAGATATGCATCTGCAAATCATCCAAGTAAGGCCATTAAGACATTTCAGATAATGGAGAAGTTCAGGTTGAGCCCTGATCAAGAAGCATTCCACATCCTCTTGAATGCACTTTGTAAAAATGGAAACATGGATGAAGCTGAAGAATTCATGCTTGTAAGTAAGAAGTTCTTCCCACTGGAGGTCGAGGGCTTTAACATTGTTCTTAATGGGTGGTGTAACATATCTGTGGATGTATATCAAGCCAAGAGAGTTTGGAGAGAAATGTCAAAATACTGTATTACACCAGACGCAACTTCTTATACACACATGATTTCCTGCTTCTCAAAGGTTGGGAATCTTTTCGACTCCCTTAGACTATATGATGAAATGAAGAAAAGGGATTGGGTTCCTGGTCTCAAGGTTTACAATTCTTTAATTTATGTACTAACCCGTGAAAATTGCTTTAAGGAAGCACTCAAAGTACTGGACAAAGTGAAAGAAATTGGTTTGCAGCCAGATGCTACCACCTATAACTCAATGATAGGTCCTTTATGTGAATCAAAGAAGCTAGAGGAGGCGCAACAGATGCTGAGTTCTATGATAAATGATAACCTCAGCCCAACCATAGAGACTTACCATGCATTTCTGCAGAGTCCAGGTTCAAAGGCAACTGTTGAAGTTCTTAATCTAATGAAGAAAGCTAATTTAGGTCCTAATGGCAATACCTTCCTTATGATTCTTGAAAAGTTCTTTATATTAGAACAACCTGGGAAGGCATTGGAGATTTGGAATGAAATGAAGAACTATGGAGTAGTGCCTGATTCCACACATTACACCTCTATGGTACAGGGGCTGGCAACTTGTGGGTTGTTAACGAAGGCCAAGGAACTTTTGGCTGAGATGACGTCAAATGGCTTTCCAGAAGATCCAAAGCTTAAGAAGCTCTTGAAGAAGCCAATTGGAGGTAGTGTTAAAGGGAAACGGAGAGTTAGACAAGTCAACCAAGCAAAAAGGATTAATCTAAAGCAAGACAGGGTTGTGAGATCGAGAAGTCCACGTCAGTCAAGAAAGAAGAAGACATCAAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

558

Amino Acids

63.47

Weight (kDa)

9.24

Isoelectric Point (pI)

41.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	198 - 240	4.9e-07	PPR repeat family
PPR_1	PF12854	224 - 250	7.9e-06	PPR repeat
PPR_2	PF13041	264 - 310	4.8e-06	PPR repeat family
PPR_3	PF13812	284 - 342	3.6e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	299 - 412	2.5e-07	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	300 - 327	9.9e-06	PPR repeat
PPR_2	PF13041	334 - 379	4.3e-09	PPR repeat family
PPR_3	PF13812	354 - 411	1.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	363 - 394	8.8e-07	PPR repeat
PPR_2	PF13041	366 - 410	4.1e-08	PPR repeat family
PPR_2	PF13041	445 - 480	9.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80880 AT1G80880 AT1G80880
fragaria_vesca	FvH4_6g28510 FvH4_6g28510
malus_domestica	MD17G1224000.v1.1
prunus_persica	Prupe.3G099700_v2.0.a1 Prupe.3G099700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132781
rosa_laevigata	RLG00000019275 RLG00000019279 RLG00000019280 RLG00000019283
rosa_multiflora	Rmu_co8097930.1_g000001 Rmu_ssc0000074.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111670
rosa_rugosa	Rorug02G0307400 Rorug02G0307500 Rorug02G0307600 Rorug02G0307700
rosa_samantha	Rh2AG360100 Rh2BG366000 Rh2CG343400 Rh2DG383000
rosa_wichuraiana	Rw2G029270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	593
AatII	GACGTC	1 cut(s)	1490
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccII	CGCG	1 cut(s)	577
AciI	CCGC	1 cut(s)	210
AclWI	GGATC	1 cut(s)	1502
AcoI	YGGCCR	1 cut(s)	244
AcsI	RAATTY	1 cut(s)	746
AcuI	CTGAAG	2 cut(s)	351, 762
AcyI	GRCGYC	3 cut(s)	339, 366, 1487
AfaI	GTAC	3 cut(s)	1026, 1065, 1428
AfiI	CCNNNNNNNGG	3 cut(s)	277, 781, 1544
AflII	CTTAAG	1 cut(s)	1517
AjiI	CACGTC	1 cut(s)	1640
AjnI	CCWGG	3 cut(s)	991, 1237, 1348
AluBI	AGCT	6 cut(s)	409, 740, 1150, 1283, 1516, 1525
AluI	AGCT	6 cut(s)	409, 740, 1150, 1283, 1516, 1525
Alw26I	GTCTC	3 cut(s)	287, 1001, 1205
AlwI	GGATC	1 cut(s)	1502
AlwNI	CAGNNNCTG	2 cut(s)	1171, 1435
AoxI	GGCC	4 cut(s)	244, 324, 633, 1461
ApeKI	GCWGC	2 cut(s)	28, 1093
ApoI	RAATTY	1 cut(s)	746
AseI	ATTAAT	1 cut(s)	1599
Asp700I	GAANNNNTTC	2 cut(s)	770, 941
AspLEI	GCGC	2 cut(s)	579, 1162
AspS9I	GGNCC	2 cut(s)	1127, 1292
AsuHPI	GGTGA	2 cut(s)	277, 464
AvaII	GGWCC	2 cut(s)	1127, 1292
BalI	TGGCCA	1 cut(s)	246
BanII	GRGCYC	1 cut(s)	677
BbsI	GAAGAC	1 cut(s)	1664
BbvCI	CCTCAGC	2 cut(s)	410, 1196
BbvI	GCAGC	2 cut(s)	15, 1105
BccI	CCATC	4 cut(s)	98, 138, 175, 487
BceAI	ACGGC	1 cut(s)	564
BciT130I	CCWGG	3 cut(s)	993, 1239, 1350
BclI	TGATCA	1 cut(s)	679
BcoDI	GTCTC	3 cut(s)	287, 1001, 1205
BfaI	CTAG	1 cut(s)	1151
BfmI	CTRYAG	1 cut(s)	1229
BfrI	CTTAAG	1 cut(s)	1517
BisI	GCNGC	2 cut(s)	29, 1094
BlsI	GCNGC	2 cut(s)	30, 1095
BmcAI	AGTACT	1 cut(s)	1065
Bme1390I	CCNGG	3 cut(s)	993, 1239, 1350
Bme18I	GGWCC	2 cut(s)	1127, 1292
BmgBI	CACGTC	1 cut(s)	1640
BmgT120I	GGNCC	2 cut(s)	1127, 1292
BmiI	GGNNCC	1 cut(s)	990
BmrFI	CCNGG	3 cut(s)	993, 1239, 1350
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	3 cut(s)	620, 1090, 1158
BmuI	ACTGGG	1 cut(s)	283
BpiI	GAAGAC	1 cut(s)	1664
BpmI	CTGGAG	1 cut(s)	800
Bpu10I	CCTNAGC	2 cut(s)	410, 1196
BpuEI	CTTGAG	1 cut(s)	983
BsaBI	GATNNNNATC	2 cut(s)	610, 837
BsaHI	GRCGYC	3 cut(s)	339, 366, 1487
BsaI	GGTCTC	2 cut(s)	287, 1001
BsaJI	CCNNGG	3 cut(s)	342, 1349, 1464
BsaWI	WCCGGW	1 cut(s)	317
BsaXI	ACNNNNNCTCC	4 cut(s)	105, 135, 1536, 1566
Bsc4I	CCNNNNNNNGG	3 cut(s)	277, 781, 1544
Bse1I	ACTGG	3 cut(s)	289, 783, 1071
Bse3DI	GCAATG	1 cut(s)	591
Bse8I	GATNNNNATC	2 cut(s)	610, 837
BseBI	CCWGG	3 cut(s)	993, 1239, 1350
BseDI	CCNNGG	3 cut(s)	342, 1349, 1464
BseGI	GGATG	6 cut(s)	148, 167, 622, 696, 739, 838
BseJI	GATNNNNATC	2 cut(s)	610, 837
BseLI	CCNNNNNNNGG	3 cut(s)	277, 781, 1544
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	4 cut(s)	401, 1163, 1210, 1470
BseNI	ACTGG	3 cut(s)	289, 783, 1071
BseRI	GAGGAG	2 cut(s)	35, 1169
BseXI	GCAGC	2 cut(s)	15, 1105
Bsh1236I	CGCG	1 cut(s)	577
BshFI	GGCC	4 cut(s)	246, 326, 635, 1463
BsiSI	CCGG	1 cut(s)	318
BslFI	GGGAC	2 cut(s)	149, 563
BslI	CCNNNNNNNGG	3 cut(s)	277, 781, 1544
BsmAI	GTCTC	3 cut(s)	287, 1001, 1205
BsmFI	GGGAC	2 cut(s)	149, 563
BsmI	GAATGC	2 cut(s)	689, 712
BsnI	GGCC	4 cut(s)	246, 326, 635, 1463
Bso31I	GGTCTC	2 cut(s)	287, 1001
Bsp1286I	GDGCHC	1 cut(s)	677
Bsp143I	GATC	3 cut(s)	679, 1507, 1625
Bsp19I	CCATGG	1 cut(s)	342
BspACI	CCGC	1 cut(s)	210
BspANI	GGCC	4 cut(s)	246, 326, 635, 1463
BspCNI	CTCAG	4 cut(s)	402, 1164, 1209, 1471
BspFNI	CGCG	1 cut(s)	577
BspLI	GGNNCC	1 cut(s)	990
BspMAI	CTGCAG	1 cut(s)	1233
BspPI	GGATC	1 cut(s)	1502
BspTI	CTTAAG	1 cut(s)	1517
BspTNI	GGTCTC	2 cut(s)	287, 1001
BsrDI	GCAATG	1 cut(s)	591
BsrI	ACTGG	3 cut(s)	289, 783, 1071
BssECI	CCNNGG	3 cut(s)	342, 1349, 1464
BssMI	GATC	3 cut(s)	679, 1507, 1625
BssNI	GRCGYC	3 cut(s)	339, 366, 1487
BssT1I	CCWWGG	2 cut(s)	342, 1464
Bst2UI	CCWGG	3 cut(s)	993, 1239, 1350
Bst4CI	ACNGT	4 cut(s)	196, 388, 878, 1255
Bst6I	CTCTTC	1 cut(s)	471
BstACI	GRCGYC	3 cut(s)	339, 366, 1487
BstAFI	CTTAAG	1 cut(s)	1517
BstAPI	GCANNNNNTGC	1 cut(s)	1168
BstC8I	GCNNGC	2 cut(s)	248, 1437
BstDEI	CTNAG	5 cut(s)	410, 953, 1172, 1196, 1479
BstDSI	CCRYGG	1 cut(s)	342
BstF5I	GGATG	6 cut(s)	148, 167, 622, 696, 739, 838
BstFNI	CGCG	1 cut(s)	577
BstHHI	GCGC	2 cut(s)	579, 1162
BstKTI	GATC	3 cut(s)	682, 1510, 1628
BstMAI	GTCTC	3 cut(s)	287, 1001, 1205
BstMBI	GATC	3 cut(s)	679, 1507, 1625
BstMWI	GCNNNNNNNGC	4 cut(s)	243, 332, 1168, 1522
BstNI	CCWGG	3 cut(s)	993, 1239, 1350
BstSCI	CCNGG	3 cut(s)	991, 1237, 1348
BstSFI	CTRYAG	1 cut(s)	1229
BstUI	CGCG	1 cut(s)	577
BstV1I	GCAGC	2 cut(s)	15, 1105
BstV2I	GAAGAC	1 cut(s)	1664
BstX2I	RGATCY	1 cut(s)	1507
BstYI	RGATCY	1 cut(s)	1507
BsuRI	GGCC	4 cut(s)	246, 326, 635, 1463
BtgI	CCRYGG	1 cut(s)	342
BtgZI	GCGATG	1 cut(s)	486
BtrI	CACGTC	1 cut(s)	1640
BtsCI	GGATG	6 cut(s)	148, 167, 622, 696, 739, 838
BtsIMutI	CAGTG	1 cut(s)	776
Cac8I	GCNNGC	2 cut(s)	248, 1437
CaiI	CAGNNNCTG	2 cut(s)	1171, 1435
CfoI	GCGC	2 cut(s)	579, 1162
Cfr13I	GGNCC	2 cut(s)	1127, 1292
CseI	GACGC	3 cut(s)	347, 355, 899
Csp6I	GTAC	3 cut(s)	1025, 1064, 1427
CviAII	CATG	5 cut(s)	343, 730, 751, 910, 1220
CviQI	GTAC	3 cut(s)	1025, 1064, 1427
DdeI	CTNAG	5 cut(s)	410, 953, 1172, 1196, 1479
DpnI	GATC	3 cut(s)	681, 1509, 1627
DpnII	GATC	3 cut(s)	679, 1507, 1625
EaeI	YGGCCR	1 cut(s)	244
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
EciI	GGCGGA	1 cut(s)	199
Eco130I	CCWWGG	2 cut(s)	342, 1464
Eco24I	GRGCYC	1 cut(s)	677
Eco31I	GGTCTC	2 cut(s)	287, 1001
Eco47I	GGWCC	2 cut(s)	1127, 1292
Eco57I	CTGAAG	2 cut(s)	351, 762
EcoO109I	RGGNCCY	2 cut(s)	1127, 1292
EcoRI	GAATTC	1 cut(s)	746
EcoRII	CCWGG	3 cut(s)	991, 1237, 1348
EcoT14I	CCWWGG	2 cut(s)	342, 1464
EcoT22I	ATGCAT	2 cut(s)	613, 1225
EcoT38I	GRGCYC	1 cut(s)	677
ErhI	CCWWGG	2 cut(s)	342, 1464
FaeI	CATG	5 cut(s)	346, 733, 754, 913, 1223
FalI	AAGNNNNNCTT	4 cut(s)	755, 787, 1511, 1543
FaqI	GGGAC	2 cut(s)	149, 563
FatI	CATG	5 cut(s)	342, 729, 750, 909, 1219
FbaI	TGATCA	1 cut(s)	679
Fnu4HI	GCNGC	2 cut(s)	29, 1094
FokI	GGATG	6 cut(s)	135, 154, 609, 683, 746, 845
FriOI	GRGCYC	1 cut(s)	677
Fsp4HI	GCNGC	2 cut(s)	29, 1094
FspBI	CTAG	1 cut(s)	1151
GlaI	GCGC	2 cut(s)	578, 1161
GluI	GCNGC	2 cut(s)	29, 1094
GsuI	CTGGAG	1 cut(s)	800
HaeIII	GGCC	4 cut(s)	246, 326, 635, 1463
HapII	CCGG	1 cut(s)	318
HgaI	GACGC	3 cut(s)	347, 355, 899
HhaI	GCGC	2 cut(s)	579, 1162
Hin1I	GRCGYC	3 cut(s)	339, 366, 1487
Hin1II	CATG	5 cut(s)	346, 733, 754, 913, 1223
Hin6I	GCGC	2 cut(s)	577, 1160
HinP1I	GCGC	2 cut(s)	577, 1160
HincII	GTYRAC	2 cut(s)	1455, 1582
HindII	GTYRAC	2 cut(s)	1455, 1582
HindIII	AAGCTT	1 cut(s)	1514
HinfI	GANTC	8 cut(s)	511, 556, 937, 947, 1139, 1234, 1318, 1403
HpaI	GTTAAC	1 cut(s)	1455
HpaII	CCGG	1 cut(s)	318
HphI	GGTGA	2 cut(s)	277, 464
Hpy166II	GTNNAC	5 cut(s)	525, 1006, 1455, 1582, 1637
Hpy188I	TCNGA	2 cut(s)	331, 651
Hpy188III	TCNNGA	9 cut(s)	296, 353, 683, 703, 1322, 1502, 1528, 1629, 1647
Hpy8I	GTNNAC	5 cut(s)	525, 1006, 1455, 1582, 1637
Hpy99I	CGWCG	2 cut(s)	341, 371
HpyAV	CCTTC	5 cut(s)	18, 214, 1318, 1348, 1453
HpyCH4III	ACNGT	4 cut(s)	196, 388, 878, 1255
HpyCH4IV	ACGT	2 cut(s)	1487, 1639
HpyCH4V	TGCA	7 cut(s)	584, 611, 617, 710, 1093, 1223, 1231
HpyF10VI	GCNNNNNNNGC	4 cut(s)	243, 332, 1168, 1522
HpyF3I	CTNAG	5 cut(s)	410, 953, 1172, 1196, 1479
HpySE526I	ACGT	2 cut(s)	1487, 1639
Hsp92I	GRCGYC	3 cut(s)	339, 366, 1487
Hsp92II	CATG	5 cut(s)	346, 733, 754, 913, 1223
HspAI	GCGC	2 cut(s)	577, 1160
Ksp22I	TGATCA	1 cut(s)	679
KspAI	GTTAAC	1 cut(s)	1455
Kzo9I	GATC	3 cut(s)	679, 1507, 1625
LmnI	GCTCC	1 cut(s)	406
Lsp1109I	GCAGC	2 cut(s)	15, 1105
LweI	GCATC	3 cut(s)	620, 1090, 1158
MaeI	CTAG	1 cut(s)	1151
MaeII	ACGT	2 cut(s)	1487, 1639
MaeIII	GTNAC	1 cut(s)	818
MalI	GATC	3 cut(s)	681, 1509, 1627
MboI	GATC	3 cut(s)	679, 1507, 1625
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	1 cut(s)	1507
MhlI	GDGCHC	1 cut(s)	677
MlsI	TGGCCA	1 cut(s)	246
MluCI	AATT	8 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1285, 1539
MluNI	TGGCCA	1 cut(s)	246
MlyI	GAGTC	3 cut(s)	520, 941, 1243
MmeI	TCCRAC	2 cut(s)	176, 223
Mox20I	TGGCCA	1 cut(s)	246
Mph1103I	ATGCAT	2 cut(s)	613, 1225
MroXI	GAANNNNTTC	2 cut(s)	770, 941
MscI	TGGCCA	1 cut(s)	246
MslI	CAYNNNNRTG	2 cut(s)	827, 1421
Msp20I	TGGCCA	1 cut(s)	246
MspCI	CTTAAG	1 cut(s)	1517
MspI	CCGG	1 cut(s)	318
MspR9I	CCNGG	3 cut(s)	993, 1239, 1350
MunI	CAATTG	1 cut(s)	1539
Mva1269I	GAATGC	2 cut(s)	689, 712
MvaI	CCWGG	3 cut(s)	993, 1239, 1350
MvnI	CGCG	1 cut(s)	577
MwoI	GCNNNNNNNGC	4 cut(s)	243, 332, 1168, 1522
NcoI	CCATGG	1 cut(s)	342
NdeII	GATC	3 cut(s)	679, 1507, 1625
NlaIII	CATG	5 cut(s)	346, 733, 754, 913, 1223
NlaIV	GGNNCC	1 cut(s)	990
NsiI	ATGCAT	2 cut(s)	613, 1225
PctI	GAATGC	2 cut(s)	689, 712
PdmI	GAANNNNTTC	2 cut(s)	770, 941
PfeI	GAWTC	5 cut(s)	556, 937, 1139, 1318, 1403
PflMI	CCANNNNNTGG	1 cut(s)	277
PkrI	GCNGC	2 cut(s)	30, 1095
PleI	GAGTC	3 cut(s)	519, 941, 1242
PpsI	GAGTC	3 cut(s)	519, 941, 1242
PpuMI	RGGWCCY	2 cut(s)	1127, 1292
PshBI	ATTAAT	1 cut(s)	1599
PsiI	TTATAA	1 cut(s)	593
Psp5II	RGGWCCY	2 cut(s)	1127, 1292
Psp6I	CCWGG	3 cut(s)	991, 1237, 1348
PspGI	CCWGG	3 cut(s)	991, 1237, 1348
PspN4I	GGNNCC	1 cut(s)	990
PspPI	GGNCC	2 cut(s)	1127, 1292
PspPPI	RGGWCCY	2 cut(s)	1127, 1292
PstI	CTGCAG	1 cut(s)	1233
PstNI	CAGNNNCTG	2 cut(s)	1171, 1435
PsuI	RGATCY	1 cut(s)	1507
RsaI	GTAC	3 cut(s)	1026, 1065, 1428
RsaNI	GTAC	3 cut(s)	1025, 1064, 1427
RseI	CAYNNNNRTG	2 cut(s)	827, 1421
SatI	GCNGC	2 cut(s)	29, 1094
Sau3AI	GATC	3 cut(s)	679, 1507, 1625
Sau96I	GGNCC	2 cut(s)	1127, 1292
ScaI	AGTACT	1 cut(s)	1065
SchI	GAGTC	3 cut(s)	520, 941, 1243
ScrFI	CCNGG	3 cut(s)	993, 1239, 1350
SduI	GDGCHC	1 cut(s)	677
SfaNI	GCATC	3 cut(s)	620, 1090, 1158
SfcI	CTRYAG	1 cut(s)	1229
SinI	GGWCC	2 cut(s)	1127, 1292
SmiMI	CAYNNNNRTG	2 cut(s)	827, 1421
SmlI	CTYRAG	2 cut(s)	998, 1517
SmoI	CTYRAG	2 cut(s)	998, 1517
Sse9I	AATT	8 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1285, 1539
SsiI	CCGC	1 cut(s)	210
SspMI	CTAG	1 cut(s)	1151
StyD4I	CCNGG	3 cut(s)	991, 1237, 1348
StyI	CCWWGG	2 cut(s)	342, 1464
TaaI	ACNGT	4 cut(s)	196, 388, 878, 1255
TaiI	ACGT	2 cut(s)	1490, 1642
TaqI	TCGA	5 cut(s)	354, 369, 786, 945, 1628
TasI	AATT	8 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1285, 1539
TatI	WGTACW	2 cut(s)	1024, 1063
TfiI	GAWTC	5 cut(s)	556, 937, 1139, 1318, 1403
TscAI	CASTG	1 cut(s)	783
TseI	GCWGC	2 cut(s)	28, 1093
TspDTI	ATGAA	9 cut(s)	137, 489, 739, 750, 981, 986, 1289, 1389, 1394
TspGWI	ACGGA	1 cut(s)	1579
TspRI	CASTG	1 cut(s)	783
Van91I	CCANNNNNTGG	1 cut(s)	277
Vha464I	CTTAAG	1 cut(s)	1517
VpaK11BI	GGWCC	2 cut(s)	1127, 1292
VspI	ATTAAT	1 cut(s)	1599
XapI	RAATTY	1 cut(s)	746
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1471
XmnI	GAANNNNTTC	2 cut(s)	770, 941
XspI	CTAG	1 cut(s)	1151
ZraI	GACGTC	1 cut(s)	1488
ZrmI	AGTACT	1 cut(s)	1065
Zsp2I	ATGCAT	2 cut(s)	613, 1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.