Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0007278

Physical Location & Seq

Genomic Coordinates Forward (+)

50916227 .. 50920305

Gene Structure 4079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG366000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCACTTCCCTCCATAGCAAGAAGGCTACGAACTAAACACCCCCTCTGCCTATCACTCACTCTACTCCACCACCACCACCACCACCCCATCACTAACTCACCCTATTCTTCGCTTTCTCTGCACCCCCGTCTCTCTCAGCCATTTCATCCAACATCTATCGTTCCATCCCAAACCCCTCGCCATTTCTCTACTCTCCGACCCTTCTCCGCCGAAATCCCCCACCACCCATTGGGCTTCAATGGCCAGCGTTTCAACACAGACCACTCCCACAACTTGGGTCTCACCCAGTTTCTTGAATTGCTTACAAGTACGGCCGGTTTGGCCTCTGAAGCCGACGCCGTGGCTTTTCTCGACGAGTCGGGCGTCGAGCCGAAGCGAGATACAGTCTTTCAGGCGATTTGGGAGCTGAGGGGAGATTGGAAGTTGGCGTTTTTGGGTTTCAAATGGGGTGAGAAGTGGGGCTGTTGCGATGAAGAGGCGTGTAGTTTGATGGTTTGGGTTTTCGGGAGTCACCGAAAGTTTAGTACTGCTTGGTGTTTGATACGGGACTTGAATCAGGCTTTGATTGATACGCGCCGCGCAATGCTTATAATGATTGATAGATATGCATCTGCAAATCATCCAAGGAAGGCCATTAAGACATTTCAGATAATGGAGAAGTTCAGGTTGAGCCCTGATCAAGAAGCATTCCACATCCTCTTGAATGCACTTTGTAAAAATGGAAACATGGAGGAAGCTGAAGAATTCATGCTTGTAAGTAAGAAGTTCTTCCCACTGGAGGTCGAGGGCTTTAACATTGTTCTCAATGGGTGGTGTAACATATCTGTTGATGTATATCAAGCCAAGAGAGTTTGGAGAGAAATGTCTAAATACTGTATTACACCAGACGCAACTTCTTATACACACATGATTTCCTGCTTCTCAAAGGTTGGGAATCTTTTCGACTCCCTTAGACTATATGATGAAATGAAGAAAAGGGATTGGGTTCCTGGTCTCAAGGTTTACAATTCTTTAATTTATGTACTAACCCGTGAAAATTGCTTTAAGGAAGCACTCAAAGTACTGGACAAAGTGAAAGAAATTGGTTTGCAGCCAGATGCTACCACCTATAATTCAATGATAGGTCCTTTATGTGAATCAAAGAAGATAGAGGAGGCGCAACAGATGCTGAGTTCTATGATAAATGATAACCTCAGCCCAACCATAGAGACTTACCATGCATTTCTGCAGAGTCCAGGTTCAAAGGCAACTGTTGAAGTTCTTAATCGAATGAAGAAAGCTAATTTAGGTCCTAATGGCAATACCTTCCTTATGATTCTTGAAAAGTTCTTTATATTAGAACAACCTGGGAAGGCATTGGAGATTTGGAATGAAATGAAGAACTATGGAGTAGTGCCTGATTCCACACATTACACCTCTATGGTACAGGGGCTGGCAACTTGTGGGTTGTTAGCGAAGGCCAAGGAACTTTTGGCTGAGATGACGTCAAATGGCATTCCGGAAGATCCAAAGCTTAAGAAGCTCTTGAAGAAGCCAATTGGAGGTAGTGTTAAAGGGAAACGGAGAGTTAGACAAGTCAACCAAGCAAAAAGGATTAATCTAAAGCAAGACAGGGTTGTGAGATCGAGAAGTCCACGTCAGTCAAGAAAGAAGAAGACATCAAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

557

Amino Acids

63.49

Weight (kDa)

9.33

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	198 - 240	2.6e-07	PPR repeat family
PPR_2	PF13041	264 - 310	4.8e-06	PPR repeat family
PPR_3	PF13812	284 - 342	3.6e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	299 - 426	1.2e-07	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	300 - 327	9.9e-06	PPR repeat
PPR_2	PF13041	334 - 379	4.3e-09	PPR repeat family
PPR_3	PF13812	354 - 411	4.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	363 - 394	1.6e-06	PPR repeat
PPR_2	PF13041	366 - 410	3.5e-08	PPR repeat family
PPR_2	PF13041	445 - 480	9.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80880 AT1G80880 AT1G80880
fragaria_vesca	FvH4_6g28510 FvH4_6g28510
malus_domestica	MD17G1224000.v1.1
prunus_persica	Prupe.3G099700_v2.0.a1 Prupe.3G099700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132781
rosa_laevigata	RLG00000019275 RLG00000019279 RLG00000019280 RLG00000019283
rosa_multiflora	Rmu_co8097930.1_g000001 Rmu_ssc0000074.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111670
rosa_rugosa	Rorug02G0307400 Rorug02G0307500 Rorug02G0307600 Rorug02G0307700
rosa_samantha	Rh2AG360100 Rh2BG366000 Rh2CG343400 Rh2DG383000
rosa_wichuraiana	Rw2G029270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	593
AatII	GACGTC	1 cut(s)	1490
AccB7I	CCANNNNNTGG	2 cut(s)	232, 277
AccII	CGCG	2 cut(s)	577, 582
AccIII	TCCGGA	1 cut(s)	1501
AciI	CCGC	2 cut(s)	210, 580
AclWI	GGATC	1 cut(s)	1502
AcoI	YGGCCR	2 cut(s)	244, 315
AcsI	RAATTY	1 cut(s)	746
AcuI	CTGAAG	2 cut(s)	351, 762
AcyI	GRCGYC	3 cut(s)	339, 366, 1487
AfaI	GTAC	5 cut(s)	313, 529, 1026, 1065, 1428
AfiI	CCNNNNNNNGG	4 cut(s)	232, 277, 781, 1544
AflII	CTTAAG	1 cut(s)	1517
AjiI	CACGTC	1 cut(s)	1640
AjnI	CCWGG	3 cut(s)	991, 1237, 1348
AluBI	AGCT	5 cut(s)	409, 740, 1283, 1516, 1525
AluI	AGCT	5 cut(s)	409, 740, 1283, 1516, 1525
Alw26I	GTCTC	4 cut(s)	137, 287, 1001, 1205
AlwI	GGATC	1 cut(s)	1502
AlwNI	CAGNNNCTG	2 cut(s)	1171, 1435
Aor13HI	TCCGGA	1 cut(s)	1501
AoxI	GGCC	5 cut(s)	244, 315, 324, 633, 1461
ApeKI	GCWGC	1 cut(s)	1093
ApoI	RAATTY	1 cut(s)	746
AseI	ATTAAT	1 cut(s)	1599
Asp700I	GAANNNNTTC	2 cut(s)	770, 941
AspLEI	GCGC	3 cut(s)	579, 584, 1162
AspS9I	GGNCC	2 cut(s)	1127, 1292
AsuHPI	GGTGA	4 cut(s)	93, 277, 464, 506
AvaII	GGWCC	2 cut(s)	1127, 1292
BalI	TGGCCA	1 cut(s)	246
BanII	GRGCYC	1 cut(s)	677
BbsI	GAAGAC	1 cut(s)	1664
BbvCI	CCTCAGC	2 cut(s)	410, 1196
BbvI	GCAGC	1 cut(s)	1105
BccI	CCATC	3 cut(s)	98, 175, 487
BceAI	ACGGC	2 cut(s)	326, 330
BciT130I	CCWGG	3 cut(s)	993, 1239, 1350
BclI	TGATCA	1 cut(s)	679
BcoDI	GTCTC	4 cut(s)	137, 287, 1001, 1205
BfmI	CTRYAG	1 cut(s)	1229
BfrI	CTTAAG	1 cut(s)	1517
BglI	GCCNNNNNGGC	1 cut(s)	323
BisI	GCNGC	2 cut(s)	580, 1094
BlsI	GCNGC	2 cut(s)	581, 1095
BmcAI	AGTACT	2 cut(s)	529, 1065
Bme1390I	CCNGG	3 cut(s)	993, 1239, 1350
Bme18I	GGWCC	2 cut(s)	1127, 1292
BmgBI	CACGTC	1 cut(s)	1640
BmgT120I	GGNCC	2 cut(s)	1127, 1292
BmiI	GGNNCC	1 cut(s)	990
BmrFI	CCNGG	3 cut(s)	993, 1239, 1350
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	3 cut(s)	620, 1090, 1158
BmuI	ACTGGG	1 cut(s)	283
BpiI	GAAGAC	1 cut(s)	1664
BpmI	CTGGAG	1 cut(s)	800
Bpu10I	CCTNAGC	2 cut(s)	410, 1196
BpuEI	CTTGAG	1 cut(s)	983
BsaBI	GATNNNNATC	2 cut(s)	610, 837
BsaHI	GRCGYC	3 cut(s)	339, 366, 1487
BsaI	GGTCTC	2 cut(s)	287, 1001
BsaJI	CCNNGG	4 cut(s)	342, 626, 1349, 1464
BsaWI	WCCGGW	1 cut(s)	1501
BsaXI	ACNNNNNCTCC	2 cut(s)	1536, 1566
Bsc4I	CCNNNNNNNGG	4 cut(s)	232, 277, 781, 1544
Bse118I	RCCGGY	1 cut(s)	317
Bse1I	ACTGG	3 cut(s)	289, 783, 1071
Bse3DI	GCAATG	1 cut(s)	591
Bse8I	GATNNNNATC	2 cut(s)	610, 837
BseAI	TCCGGA	1 cut(s)	1501
BseBI	CCWGG	3 cut(s)	993, 1239, 1350
BseDI	CCNNGG	4 cut(s)	342, 626, 1349, 1464
BseGI	GGATG	4 cut(s)	148, 167, 622, 696
BseJI	GATNNNNATC	2 cut(s)	610, 837
BseLI	CCNNNNNNNGG	4 cut(s)	232, 277, 781, 1544
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	5 cut(s)	152, 401, 1163, 1210, 1470
BseNI	ACTGG	3 cut(s)	289, 783, 1071
BseRI	GAGGAG	1 cut(s)	1169
BseX3I	CGGCCG	1 cut(s)	315
BseXI	GCAGC	1 cut(s)	1105
BsgI	GTGCAG	1 cut(s)	107
Bsh1236I	CGCG	2 cut(s)	577, 582
Bsh1285I	CGRYCG	1 cut(s)	318
BshFI	GGCC	5 cut(s)	246, 317, 326, 635, 1463
BsiEI	CGRYCG	1 cut(s)	318
BsiSI	CCGG	2 cut(s)	318, 1502
BslFI	GGGAC	1 cut(s)	563
BslI	CCNNNNNNNGG	4 cut(s)	232, 277, 781, 1544
BsmAI	GTCTC	4 cut(s)	137, 287, 1001, 1205
BsmBI	CGTCTC	1 cut(s)	137
BsmFI	GGGAC	1 cut(s)	563
BsmI	GAATGC	3 cut(s)	689, 712, 1497
BsnI	GGCC	5 cut(s)	246, 317, 326, 635, 1463
Bso31I	GGTCTC	2 cut(s)	287, 1001
Bsp1286I	GDGCHC	1 cut(s)	677
Bsp13I	TCCGGA	1 cut(s)	1501
Bsp143I	GATC	3 cut(s)	679, 1507, 1625
BspACI	CCGC	2 cut(s)	210, 580
BspANI	GGCC	5 cut(s)	246, 317, 326, 635, 1463
BspCNI	CTCAG	5 cut(s)	151, 402, 1164, 1209, 1471
BspEI	TCCGGA	1 cut(s)	1501
BspFNI	CGCG	2 cut(s)	577, 582
BspLI	GGNNCC	1 cut(s)	990
BspMAI	CTGCAG	1 cut(s)	1233
BspPI	GGATC	1 cut(s)	1502
BspTI	CTTAAG	1 cut(s)	1517
BspTNI	GGTCTC	2 cut(s)	287, 1001
BsrDI	GCAATG	1 cut(s)	591
BsrFI	RCCGGY	1 cut(s)	317
BsrI	ACTGG	3 cut(s)	289, 783, 1071
BssAI	RCCGGY	1 cut(s)	317
BssECI	CCNNGG	4 cut(s)	342, 626, 1349, 1464
BssMI	GATC	3 cut(s)	679, 1507, 1625
BssNI	GRCGYC	3 cut(s)	339, 366, 1487
BssT1I	CCWWGG	2 cut(s)	626, 1464
Bst2UI	CCWGG	3 cut(s)	993, 1239, 1350
Bst4CI	ACNGT	3 cut(s)	388, 878, 1255
Bst6I	CTCTTC	1 cut(s)	471
BstACI	GRCGYC	3 cut(s)	339, 366, 1487
BstAFI	CTTAAG	1 cut(s)	1517
BstAPI	GCANNNNNTGC	1 cut(s)	1168
BstC8I	GCNNGC	2 cut(s)	248, 1437
BstDEI	CTNAG	6 cut(s)	138, 410, 953, 1172, 1196, 1479
BstDSI	CCRYGG	1 cut(s)	342
BstF5I	GGATG	4 cut(s)	148, 167, 622, 696
BstFNI	CGCG	2 cut(s)	577, 582
BstHHI	GCGC	3 cut(s)	579, 584, 1162
BstKTI	GATC	3 cut(s)	682, 1510, 1628
BstMAI	GTCTC	4 cut(s)	137, 287, 1001, 1205
BstMBI	GATC	3 cut(s)	679, 1507, 1625
BstMCI	CGRYCG	1 cut(s)	318
BstMWI	GCNNNNNNNGC	6 cut(s)	121, 243, 323, 332, 1168, 1522
BstNI	CCWGG	3 cut(s)	993, 1239, 1350
BstSCI	CCNGG	3 cut(s)	991, 1237, 1348
BstSFI	CTRYAG	1 cut(s)	1229
BstUI	CGCG	2 cut(s)	577, 582
BstV1I	GCAGC	1 cut(s)	1105
BstV2I	GAAGAC	1 cut(s)	1664
BstX2I	RGATCY	1 cut(s)	1507
BstYI	RGATCY	1 cut(s)	1507
BstZI	CGGCCG	1 cut(s)	315
BsuRI	GGCC	5 cut(s)	246, 317, 326, 635, 1463
BtgI	CCRYGG	1 cut(s)	342
BtgZI	GCGATG	1 cut(s)	486
BtrI	CACGTC	1 cut(s)	1640
BtsCI	GGATG	4 cut(s)	148, 167, 622, 696
BtsIMutI	CAGTG	1 cut(s)	776
Cac8I	GCNNGC	2 cut(s)	248, 1437
CaiI	CAGNNNCTG	2 cut(s)	1171, 1435
CfoI	GCGC	3 cut(s)	579, 584, 1162
Cfr10I	RCCGGY	1 cut(s)	317
Cfr13I	GGNCC	2 cut(s)	1127, 1292
CseI	GACGC	3 cut(s)	347, 355, 899
Csp6I	GTAC	5 cut(s)	312, 528, 1025, 1064, 1427
CviAII	CATG	4 cut(s)	730, 751, 910, 1220
CviQI	GTAC	5 cut(s)	312, 528, 1025, 1064, 1427
DdeI	CTNAG	6 cut(s)	138, 410, 953, 1172, 1196, 1479
DpnI	GATC	3 cut(s)	681, 1509, 1627
DpnII	GATC	3 cut(s)	679, 1507, 1625
EaeI	YGGCCR	2 cut(s)	244, 315
EagI	CGGCCG	1 cut(s)	315
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
EciI	GGCGGA	1 cut(s)	199
EclXI	CGGCCG	1 cut(s)	315
Eco130I	CCWWGG	2 cut(s)	626, 1464
Eco24I	GRGCYC	1 cut(s)	677
Eco31I	GGTCTC	2 cut(s)	287, 1001
Eco47I	GGWCC	2 cut(s)	1127, 1292
Eco52I	CGGCCG	1 cut(s)	315
Eco57I	CTGAAG	2 cut(s)	351, 762
EcoO109I	RGGNCCY	2 cut(s)	1127, 1292
EcoRI	GAATTC	1 cut(s)	746
EcoRII	CCWGG	3 cut(s)	991, 1237, 1348
EcoT14I	CCWWGG	2 cut(s)	626, 1464
EcoT22I	ATGCAT	2 cut(s)	613, 1225
EcoT38I	GRGCYC	1 cut(s)	677
ErhI	CCWWGG	2 cut(s)	626, 1464
Esp3I	CGTCTC	1 cut(s)	137
FaeI	CATG	4 cut(s)	733, 754, 913, 1223
FalI	AAGNNNNNCTT	4 cut(s)	755, 787, 1511, 1543
FaqI	GGGAC	1 cut(s)	563
FatI	CATG	4 cut(s)	729, 750, 909, 1219
FbaI	TGATCA	1 cut(s)	679
Fnu4HI	GCNGC	2 cut(s)	580, 1094
FokI	GGATG	4 cut(s)	135, 154, 609, 683
FriOI	GRGCYC	1 cut(s)	677
Fsp4HI	GCNGC	2 cut(s)	580, 1094
GlaI	GCGC	3 cut(s)	578, 583, 1161
GluI	GCNGC	2 cut(s)	580, 1094
GsuI	CTGGAG	1 cut(s)	800
HaeIII	GGCC	5 cut(s)	246, 317, 326, 635, 1463
HapII	CCGG	2 cut(s)	318, 1502
HgaI	GACGC	3 cut(s)	347, 355, 899
HhaI	GCGC	3 cut(s)	579, 584, 1162
Hin1I	GRCGYC	3 cut(s)	339, 366, 1487
Hin1II	CATG	4 cut(s)	733, 754, 913, 1223
Hin6I	GCGC	3 cut(s)	577, 582, 1160
HinP1I	GCGC	3 cut(s)	577, 582, 1160
HincII	GTYRAC	1 cut(s)	1582
HindII	GTYRAC	1 cut(s)	1582
HindIII	AAGCTT	1 cut(s)	1514
HinfI	GANTC	9 cut(s)	359, 511, 556, 937, 947, 1139, 1234, 1318, 1403
HpaII	CCGG	2 cut(s)	318, 1502
HphI	GGTGA	4 cut(s)	93, 277, 464, 506
Hpy166II	GTNNAC	3 cut(s)	1006, 1582, 1637
Hpy188I	TCNGA	3 cut(s)	200, 331, 651
Hpy8I	GTNNAC	3 cut(s)	1006, 1582, 1637
Hpy99I	CGWCG	3 cut(s)	341, 359, 371
HpyAV	CCTTC	6 cut(s)	18, 214, 625, 1318, 1348, 1453
HpyCH4III	ACNGT	3 cut(s)	388, 878, 1255
HpyCH4IV	ACGT	2 cut(s)	1487, 1639
HpyCH4V	TGCA	7 cut(s)	124, 611, 617, 710, 1093, 1223, 1231
HpyF10VI	GCNNNNNNNGC	6 cut(s)	121, 243, 323, 332, 1168, 1522
HpyF3I	CTNAG	6 cut(s)	138, 410, 953, 1172, 1196, 1479
HpySE526I	ACGT	2 cut(s)	1487, 1639
Hsp92I	GRCGYC	3 cut(s)	339, 366, 1487
Hsp92II	CATG	4 cut(s)	733, 754, 913, 1223
HspAI	GCGC	3 cut(s)	577, 582, 1160
Kpn2I	TCCGGA	1 cut(s)	1501
Ksp22I	TGATCA	1 cut(s)	679
Kzo9I	GATC	3 cut(s)	679, 1507, 1625
LmnI	GCTCC	1 cut(s)	406
Lsp1109I	GCAGC	1 cut(s)	1105
LweI	GCATC	3 cut(s)	620, 1090, 1158
MaeII	ACGT	2 cut(s)	1487, 1639
MaeIII	GTNAC	2 cut(s)	512, 818
MalI	GATC	3 cut(s)	681, 1509, 1627
MboI	GATC	3 cut(s)	679, 1507, 1625
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	1 cut(s)	1507
MhlI	GDGCHC	1 cut(s)	677
MlsI	TGGCCA	1 cut(s)	246
MluCI	AATT	9 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1114, 1285, 1539
MluNI	TGGCCA	1 cut(s)	246
MlyI	GAGTC	4 cut(s)	368, 520, 941, 1243
MmeI	TCCRAC	2 cut(s)	176, 223
Mox20I	TGGCCA	1 cut(s)	246
Mph1103I	ATGCAT	2 cut(s)	613, 1225
MroI	TCCGGA	1 cut(s)	1501
MroXI	GAANNNNTTC	2 cut(s)	770, 941
MscI	TGGCCA	1 cut(s)	246
MseI	TTAA	8 cut(s)	639, 795, 1016, 1047, 1266, 1518, 1554, 1599
MslI	CAYNNNNRTG	1 cut(s)	1421
Msp20I	TGGCCA	1 cut(s)	246
MspCI	CTTAAG	1 cut(s)	1517
MspI	CCGG	2 cut(s)	318, 1502
MspR9I	CCNGG	3 cut(s)	993, 1239, 1350
MteI	GCGCNGCGC	1 cut(s)	580
MunI	CAATTG	1 cut(s)	1539
Mva1269I	GAATGC	3 cut(s)	689, 712, 1497
MvaI	CCWGG	3 cut(s)	993, 1239, 1350
MvnI	CGCG	2 cut(s)	577, 582
MwoI	GCNNNNNNNGC	6 cut(s)	121, 243, 323, 332, 1168, 1522
NdeII	GATC	3 cut(s)	679, 1507, 1625
NlaIII	CATG	4 cut(s)	733, 754, 913, 1223
NlaIV	GGNNCC	1 cut(s)	990
NmuCI	GTSAC	1 cut(s)	512
NsiI	ATGCAT	2 cut(s)	613, 1225
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PctI	GAATGC	3 cut(s)	689, 712, 1497
PdmI	GAANNNNTTC	2 cut(s)	770, 941
PfeI	GAWTC	5 cut(s)	556, 937, 1139, 1318, 1403
PflMI	CCANNNNNTGG	2 cut(s)	232, 277
PkrI	GCNGC	2 cut(s)	581, 1095
PleI	GAGTC	4 cut(s)	367, 519, 941, 1242
PpsI	GAGTC	4 cut(s)	367, 519, 941, 1242
PpuMI	RGGWCCY	2 cut(s)	1127, 1292
PshBI	ATTAAT	1 cut(s)	1599
PsiI	TTATAA	1 cut(s)	593
Psp5II	RGGWCCY	2 cut(s)	1127, 1292
Psp6I	CCWGG	3 cut(s)	991, 1237, 1348
PspGI	CCWGG	3 cut(s)	991, 1237, 1348
PspN4I	GGNNCC	1 cut(s)	990
PspPI	GGNCC	2 cut(s)	1127, 1292
PspPPI	RGGWCCY	2 cut(s)	1127, 1292
PstI	CTGCAG	1 cut(s)	1233
PstNI	CAGNNNCTG	2 cut(s)	1171, 1435
PsuI	RGATCY	1 cut(s)	1507
RsaI	GTAC	5 cut(s)	313, 529, 1026, 1065, 1428
RsaNI	GTAC	5 cut(s)	312, 528, 1025, 1064, 1427
RseI	CAYNNNNRTG	1 cut(s)	1421
SaqAI	TTAA	8 cut(s)	639, 795, 1016, 1047, 1266, 1518, 1554, 1599
SatI	GCNGC	2 cut(s)	580, 1094
Sau3AI	GATC	3 cut(s)	679, 1507, 1625
Sau96I	GGNCC	2 cut(s)	1127, 1292
ScaI	AGTACT	2 cut(s)	529, 1065
SchI	GAGTC	4 cut(s)	368, 520, 941, 1243
ScrFI	CCNGG	3 cut(s)	993, 1239, 1350
SduI	GDGCHC	1 cut(s)	677
SfaNI	GCATC	3 cut(s)	620, 1090, 1158
SfcI	CTRYAG	1 cut(s)	1229
SfiI	GGCCNNNNNGGCC	1 cut(s)	323
SinI	GGWCC	2 cut(s)	1127, 1292
SmiMI	CAYNNNNRTG	1 cut(s)	1421
SmlI	CTYRAG	2 cut(s)	998, 1517
SmoI	CTYRAG	2 cut(s)	998, 1517
Sse9I	AATT	9 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1114, 1285, 1539
SsiI	CCGC	2 cut(s)	210, 580
StyD4I	CCNGG	3 cut(s)	991, 1237, 1348
StyI	CCWWGG	2 cut(s)	626, 1464
TaaI	ACNGT	3 cut(s)	388, 878, 1255
TaiI	ACGT	2 cut(s)	1490, 1642
TaqI	TCGA	6 cut(s)	354, 369, 786, 945, 1270, 1628
TasI	AATT	9 cut(s)	299, 746, 1009, 1017, 1039, 1083, 1114, 1285, 1539
TatI	WGTACW	3 cut(s)	527, 1024, 1063
TauI	GCSGC	1 cut(s)	582
TfiI	GAWTC	5 cut(s)	556, 937, 1139, 1318, 1403
Tru1I	TTAA	8 cut(s)	639, 795, 1016, 1047, 1266, 1518, 1554, 1599
Tru9I	TTAA	8 cut(s)	639, 795, 1016, 1047, 1266, 1518, 1554, 1599
TscAI	CASTG	1 cut(s)	783
TseFI	GTSAC	1 cut(s)	512
TseI	GCWGC	1 cut(s)	1093
Tsp45I	GTSAC	1 cut(s)	512
TspDTI	ATGAA	8 cut(s)	137, 489, 739, 981, 986, 1289, 1389, 1394
TspGWI	ACGGA	1 cut(s)	1579
TspRI	CASTG	1 cut(s)	783
Van91I	CCANNNNNTGG	2 cut(s)	232, 277
Vha464I	CTTAAG	1 cut(s)	1517
VpaK11BI	GGWCC	2 cut(s)	1127, 1292
VspI	ATTAAT	1 cut(s)	1599
XapI	RAATTY	1 cut(s)	746
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1471
XmnI	GAANNNNTTC	2 cut(s)	770, 941
ZraI	GACGTC	1 cut(s)	1488
ZrmI	AGTACT	2 cut(s)	529, 1065
Zsp2I	ATGCAT	2 cut(s)	613, 1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.