Pentatricopeptide repeat-containing protein At1g80880
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80880 AT1G80880 AT1G80880 |
| fragaria_vesca | FvH4_6g28510 FvH4_6g28510 |
| malus_domestica | MD17G1224000.v1.1 |
| prunus_persica | Prupe.3G099700_v2.0.a1 Prupe.3G099700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0132781 |
| rosa_laevigata | RLG00000019275 RLG00000019279 RLG00000019280 RLG00000019283 |
| rosa_multiflora | Rmu_co8097930.1_g000001 Rmu_ssc0000074.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00111670 |
| rosa_rugosa | Rorug02G0307400 Rorug02G0307500 Rorug02G0307600 Rorug02G0307700 |
| rosa_samantha | Rh2AG360100 Rh2BG366000 Rh2CG343400 Rh2DG383000 |
| rosa_wichuraiana | Rw2G029270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 45, 66 |
| AccI | GTMKAC | 2 cut(s) | 126, 419 |
| AccIII | TCCGGA | 1 cut(s) | 487 |
| AciI | CCGC | 1 cut(s) | 411 |
| AcsI | RAATTY | 1 cut(s) | 385 |
| AfaI | GTAC | 3 cut(s) | 181, 329, 408 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 356, 470, 536 |
| AflIII | ACRYGT | 1 cut(s) | 353 |
| AgsI | TTSAA | 3 cut(s) | 15, 143, 390 |
| AluBI | AGCT | 1 cut(s) | 431 |
| AluI | AGCT | 1 cut(s) | 431 |
| Alw21I | GWGCWC | 1 cut(s) | 265 |
| Aor13HI | TCCGGA | 1 cut(s) | 487 |
| AoxI | GGCC | 1 cut(s) | 527 |
| ApoI | RAATTY | 1 cut(s) | 385 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 385 |
| BbsI | GAAGAC | 1 cut(s) | 257 |
| Bbv12I | GWGCWC | 1 cut(s) | 265 |
| BccI | CCATC | 3 cut(s) | 152, 265, 464 |
| BfaI | CTAG | 4 cut(s) | 266, 366, 432, 453 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BmsI | GCATC | 2 cut(s) | 211, 484 |
| BpiI | GAAGAC | 1 cut(s) | 257 |
| BsaWI | WCCGGW | 2 cut(s) | 463, 487 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 356, 470, 536 |
| BseAI | TCCGGA | 1 cut(s) | 487 |
| BseGI | GGATG | 4 cut(s) | 10, 163, 276, 484 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 356, 470, 536 |
| BshFI | GGCC | 1 cut(s) | 529 |
| BsiHKAI | GWGCWC | 1 cut(s) | 265 |
| BsiSI | CCGG | 2 cut(s) | 464, 488 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 356, 470, 536 |
| BsmI | GAATGC | 1 cut(s) | 454 |
| BsnI | GGCC | 1 cut(s) | 529 |
| Bsp1286I | GDGCHC | 1 cut(s) | 265 |
| Bsp13I | TCCGGA | 1 cut(s) | 487 |
| BspACI | CCGC | 1 cut(s) | 411 |
| BspANI | GGCC | 1 cut(s) | 529 |
| BspEI | TCCGGA | 1 cut(s) | 487 |
| Bst4CI | ACNGT | 2 cut(s) | 184, 327 |
| BstC8I | GCNNGC | 1 cut(s) | 295 |
| BstDEI | CTNAG | 1 cut(s) | 414 |
| BstF5I | GGATG | 4 cut(s) | 10, 163, 276, 484 |
| BstNSI | RCATGY | 2 cut(s) | 293, 357 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstV2I | GAAGAC | 1 cut(s) | 257 |
| BsuRI | GGCC | 1 cut(s) | 529 |
| BtsCI | GGATG | 4 cut(s) | 10, 163, 276, 484 |
| Cac8I | GCNNGC | 1 cut(s) | 295 |
| CseI | GACGC | 1 cut(s) | 470 |
| Csp6I | GTAC | 3 cut(s) | 180, 328, 407 |
| CviAII | CATG | 3 cut(s) | 83, 290, 354 |
| CviJI | RGCY | 2 cut(s) | 431, 529 |
| CviKI_1 | RGCY | 2 cut(s) | 431, 529 |
| CviQI | GTAC | 3 cut(s) | 180, 328, 407 |
| DdeI | CTNAG | 1 cut(s) | 414 |
| FaeI | CATG | 3 cut(s) | 86, 293, 357 |
| FatI | CATG | 3 cut(s) | 82, 289, 353 |
| FauI | CCCGC | 1 cut(s) | 418 |
| FblI | GTMKAC | 2 cut(s) | 126, 419 |
| FokI | GGATG | 4 cut(s) | 17, 170, 283, 471 |
| FspBI | CTAG | 4 cut(s) | 266, 366, 432, 453 |
| HaeIII | GGCC | 1 cut(s) | 529 |
| HapII | CCGG | 2 cut(s) | 464, 488 |
| HgaI | GACGC | 1 cut(s) | 470 |
| Hin1II | CATG | 3 cut(s) | 86, 293, 357 |
| HincII | GTYRAC | 1 cut(s) | 501 |
| HindII | GTYRAC | 1 cut(s) | 501 |
| HinfI | GANTC | 4 cut(s) | 31, 128, 143, 149 |
| HpaII | CCGG | 2 cut(s) | 464, 488 |
| Hpy166II | GTNNAC | 5 cut(s) | 127, 238, 407, 420, 501 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 488 |
| Hpy8I | GTNNAC | 5 cut(s) | 127, 238, 407, 420, 501 |
| HpyAV | CCTTC | 3 cut(s) | 206, 371, 395 |
| HpyCH4III | ACNGT | 2 cut(s) | 184, 327 |
| HpyCH4V | TGCA | 1 cut(s) | 309 |
| HpyF3I | CTNAG | 1 cut(s) | 414 |
| Hsp92II | CATG | 3 cut(s) | 86, 293, 357 |
| Kpn2I | TCCGGA | 1 cut(s) | 487 |
| LmnI | GCTCC | 2 cut(s) | 199, 260 |
| LpnPI | CCDG | 2 cut(s) | 477, 501 |
| LweI | GCATC | 2 cut(s) | 211, 484 |
| MaeI | CTAG | 4 cut(s) | 266, 366, 432, 453 |
| MboII | GAAGA | 6 cut(s) | 131, 197, 262, 295, 479, 503 |
| MfeI | CAATTG | 1 cut(s) | 343 |
| MhlI | GDGCHC | 1 cut(s) | 265 |
| MluCI | AATT | 4 cut(s) | 343, 385, 392, 436 |
| MlyI | GAGTC | 3 cut(s) | 25, 122, 143 |
| MnlI | CCTC | 2 cut(s) | 235, 390 |
| MroI | TCCGGA | 1 cut(s) | 487 |
| MroXI | GAANNNNTTC | 1 cut(s) | 385 |
| MseI | TTAA | 2 cut(s) | 27, 476 |
| MspI | CCGG | 2 cut(s) | 464, 488 |
| MunI | CAATTG | 1 cut(s) | 343 |
| Mva1269I | GAATGC | 1 cut(s) | 454 |
| NlaIII | CATG | 3 cut(s) | 86, 293, 357 |
| NspI | RCATGY | 2 cut(s) | 293, 357 |
| PciI | ACATGT | 1 cut(s) | 353 |
| PctI | GAATGC | 1 cut(s) | 454 |
| PdmI | GAANNNNTTC | 1 cut(s) | 385 |
| PfeI | GAWTC | 1 cut(s) | 143 |
| PleI | GAGTC | 3 cut(s) | 25, 122, 143 |
| PpsI | GAGTC | 3 cut(s) | 25, 122, 143 |
| PscI | ACATGT | 1 cut(s) | 353 |
| PsiI | TTATAA | 2 cut(s) | 45, 66 |
| RsaI | GTAC | 3 cut(s) | 181, 329, 408 |
| RsaNI | GTAC | 3 cut(s) | 180, 328, 407 |
| SaqAI | TTAA | 2 cut(s) | 27, 476 |
| SchI | GAGTC | 3 cut(s) | 25, 122, 143 |
| SduI | GDGCHC | 1 cut(s) | 265 |
| SetI | ASST | 4 cut(s) | 217, 371, 406, 433 |
| SfaNI | GCATC | 2 cut(s) | 211, 484 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| Sse9I | AATT | 4 cut(s) | 343, 385, 392, 436 |
| SsiI | CCGC | 1 cut(s) | 411 |
| SspMI | CTAG | 4 cut(s) | 266, 366, 432, 453 |
| TaaI | ACNGT | 2 cut(s) | 184, 327 |
| TaqI | TCGA | 1 cut(s) | 137 |
| TasI | AATT | 4 cut(s) | 343, 385, 392, 436 |
| TatI | WGTACW | 2 cut(s) | 179, 327 |
| TfiI | GAWTC | 1 cut(s) | 143 |
| Tru1I | TTAA | 2 cut(s) | 27, 476 |
| Tru9I | TTAA | 2 cut(s) | 27, 476 |
| TspDTI | ATGAA | 3 cut(s) | 72, 234, 351 |
| XapI | RAATTY | 1 cut(s) | 385 |
| XceI | RCATGY | 2 cut(s) | 293, 357 |
| XmiI | GTMKAC | 2 cut(s) | 126, 419 |
| XmnI | GAANNNNTTC | 1 cut(s) | 385 |
| XspI | CTAG | 4 cut(s) | 266, 366, 432, 453 |