Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007278

Physical Location & Seq

Genomic Coordinates Forward (+)

46175376 .. 46179284

Gene Structure 3909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG343400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGCACTTCCCTCCATAGCAAGAAGGCTACGAACTAAACACCCCCTCTGCCTATCACTCACTCTACTCCACCACCACCACCACCACCCCATCTCTAACTCACCCTATTCTTCACTTTCTCTCCACCCCGGTCTCTCTCAGCCAACATCTATCGTGCCATCCCAAAGCCCTCGCCATCTCTCTACTCTCCGACCCTTCTCCGCCGAAATCACCCACCACCCATTGGGCTTCAATGGCCAGCGTTTCAAGACAGACGATACCCACAACTTGGGTCTCACCCAGTTTCTTGAATTGCTCACAAGTACGGCCGCTTTGGCCTCTGAAGCCGACGCCATGGCTTTTCTCGACGAGTCGGGCGTCGAGGCGAAGCGAGATACGGTCTTTCAGGCGATTTGGGAGCTGAGGGGAGATTGGAAGTTGGCGTTTTTGGGTTTCAAATGGGGTGAGAAGTGGGGCTGTTGCGATGAAGAGGCGTGTAGTTTGATGGTTTGGGTTTTGGGGAGTCATAGAAAGTTTACTACTGCTTGGTGTTTGATACGGGACTTGAATCAGGCTTTGATTGATACGCGCCGTGCAATGCTTATAATGATTGATAGATATGCATCTGCAAATCATCCAAGTAAGGCCATTAAGACATTTCAGATAATGGAGAAGTTCAGGTTGAGCCCTGATCAAGAATCATTCCACATCCTCTTGAATGCACTTTGTAAAAATGGAAACATGGATGAAGCTGAAGAATTCATGCTTGTAAGTAAGAAGTTCTTCCCACTGGAGGTCGAGGGCTTTAACATTGTTCTTAATGGGTGGTGTAACATATCTGTGGATGTATATCAAGCCAAGAGAGTTTGGAGAGAAATGTCAAAATACTGTATTACACCAGACGCAACTTCTTATACACACATGATTTCCTGCTTCTCAAAGGTTGGGAATCTTTTCGACTCCCTTAGACTATATGATGAAATGAAGAAAAGGGATTGGGTTCCTGGTCTCAAGGTTTACAATTCTTTAATTTATGTACTAACCCGTGAAAATTGCTTTAAGGAAGCACTCAAAGTACTGGACAAAGTGAAAGAAATTGGTTTGCAGCCAGATGCTACCACCTATAGCTCAATGATAGGTCCTTTATGTGAATCAAAGAAGCTAGAGGAGGCGCAACAGATGCTGAGTTCTATGATAAATGATAACCTCAGCCCAACCATAGAGACTTACCATGCGGTTCTGCAGAGTCCAGGTTCAAAGGCAACTGTTGAGGTTCTTAATCGAATGAAGAAAGCTAATTTAGGTCCTAATGGCAATACCTTCCTTATGATTCTTGAAAAGTTCTTTATATTAGAACAACCTGGGAAGGCATTGGAGATTTGGAATGAAATGAAGAACTATGGAGTAGTGCCTGATTCCACACATTACACCTCTATGGTACAGGGGCTGGCAACTTGTGGGTTGTTAACGAAGGCCAAGGAACTTTTGGCTGAGATGACGTCAAATGGCTTTCCAGAAGATCCAAAGCTTAAGAAGCTCTTGAAGAAGCCAGTTGGAGGTAGTGTTAAAGGAAAACGGAGAGTTAGACAAGTCAACCAAGCAAAAAGGATTAATCTAAAGCAAGACAGGGTTGTGAGATCGAGAAGTCCACGTCAGTCAAGAAAGAAGAAGGCATCAAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

554

Amino Acids

62.84

Weight (kDa)

9.24

Isoelectric Point (pI)

43.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	195 - 237	1.4e-07	PPR repeat family
PPR_1	PF12854	221 - 247	2.1e-06	PPR repeat
PPR_2	PF13041	261 - 307	4.8e-06	PPR repeat family
PPR_3	PF13812	281 - 339	3.6e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	296 - 409	3.2e-08	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	297 - 324	9.9e-06	PPR repeat
PPR_2	PF13041	331 - 376	5.6e-09	PPR repeat family
PPR_3	PF13812	351 - 408	3.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	360 - 391	5.1e-06	PPR repeat
PPR_2	PF13041	442 - 477	9.3e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80880 AT1G80880 AT1G80880
fragaria_vesca	FvH4_6g28510 FvH4_6g28510
malus_domestica	MD17G1224000.v1.1
prunus_persica	Prupe.3G099700_v2.0.a1 Prupe.3G099700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132781
rosa_laevigata	RLG00000019275 RLG00000019279 RLG00000019280 RLG00000019283
rosa_multiflora	Rmu_co8097930.1_g000001 Rmu_ssc0000074.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111670
rosa_rugosa	Rorug02G0307400 Rorug02G0307500 Rorug02G0307600 Rorug02G0307700
rosa_samantha	Rh2AG360100 Rh2BG366000 Rh2CG343400 Rh2DG383000
rosa_wichuraiana	Rw2G029270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	584
AatII	GACGTC	1 cut(s)	1481
AccB7I	CCANNNNNTGG	2 cut(s)	223, 268
AccII	CGCG	1 cut(s)	568
AciI	CCGC	3 cut(s)	201, 309, 1214
AclWI	GGATC	1 cut(s)	1493
AcoI	YGGCCR	2 cut(s)	235, 306
AcsI	RAATTY	1 cut(s)	737
AcuI	CTGAAG	2 cut(s)	342, 753
AcyI	GRCGYC	3 cut(s)	330, 357, 1478
AfaI	GTAC	4 cut(s)	304, 1017, 1056, 1419
AfiI	CCNNNNNNNGG	4 cut(s)	223, 268, 772, 1535
AflII	CTTAAG	1 cut(s)	1508
AgsI	TTSAA	9 cut(s)	232, 247, 290, 436, 547, 697, 1236, 1316, 1522
AjiI	CACGTC	1 cut(s)	1631
AjnI	CCWGG	3 cut(s)	982, 1228, 1339
AluBI	AGCT	7 cut(s)	400, 731, 1107, 1141, 1274, 1507, 1516
AluI	AGCT	7 cut(s)	400, 731, 1107, 1141, 1274, 1507, 1516
Alw26I	GTCTC	4 cut(s)	137, 278, 992, 1196
AlwI	GGATC	1 cut(s)	1493
AlwNI	CAGNNNCTG	2 cut(s)	1162, 1426
AoxI	GGCC	5 cut(s)	235, 306, 315, 624, 1452
ApeKI	GCWGC	1 cut(s)	1084
ApoI	RAATTY	1 cut(s)	737
AseI	ATTAAT	1 cut(s)	1590
Asp700I	GAANNNNTTC	2 cut(s)	761, 932
AspLEI	GCGC	2 cut(s)	570, 1153
AspS9I	GGNCC	2 cut(s)	1118, 1283
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	4 cut(s)	93, 202, 268, 455
AvaII	GGWCC	2 cut(s)	1118, 1283
BalI	TGGCCA	1 cut(s)	237
BanII	GRGCYC	1 cut(s)	668
BbvCI	CCTCAGC	2 cut(s)	401, 1187
BbvI	GCAGC	1 cut(s)	1096
BccI	CCATC	4 cut(s)	98, 166, 183, 478
BceAI	ACGGC	2 cut(s)	321, 555
BciT130I	CCWGG	3 cut(s)	984, 1230, 1341
BclI	TGATCA	1 cut(s)	670
BcnI	CCSGG	1 cut(s)	129
BcoDI	GTCTC	4 cut(s)	137, 278, 992, 1196
BfaI	CTAG	1 cut(s)	1142
BfmI	CTRYAG	2 cut(s)	1102, 1220
BfrI	CTTAAG	1 cut(s)	1508
BglI	GCCNNNNNGGC	1 cut(s)	314
BisI	GCNGC	2 cut(s)	309, 1085
BlsI	GCNGC	2 cut(s)	310, 1086
BmcAI	AGTACT	1 cut(s)	1056
Bme1390I	CCNGG	4 cut(s)	129, 984, 1230, 1341
Bme18I	GGWCC	2 cut(s)	1118, 1283
BmgBI	CACGTC	1 cut(s)	1631
BmgT120I	GGNCC	2 cut(s)	1118, 1283
BmiI	GGNNCC	1 cut(s)	981
BmrFI	CCNGG	4 cut(s)	129, 984, 1230, 1341
BmrI	ACTGGG	1 cut(s)	274
BmsI	GCATC	4 cut(s)	611, 1081, 1149, 1661
BmuI	ACTGGG	1 cut(s)	274
BpmI	CTGGAG	1 cut(s)	791
Bpu10I	CCTNAGC	2 cut(s)	401, 1187
BpuEI	CTTGAG	1 cut(s)	974
BpuMI	CCSGG	1 cut(s)	129
BsaBI	GATNNNNATC	2 cut(s)	601, 828
BsaHI	GRCGYC	3 cut(s)	330, 357, 1478
BsaI	GGTCTC	3 cut(s)	137, 278, 992
BsaJI	CCNNGG	4 cut(s)	127, 333, 1340, 1455
BsaXI	ACNNNNNCTCC	4 cut(s)	105, 135, 1527, 1557
Bsc4I	CCNNNNNNNGG	4 cut(s)	223, 268, 772, 1535
Bse1I	ACTGG	4 cut(s)	280, 774, 1062, 1529
Bse3DI	GCAATG	1 cut(s)	582
Bse8I	GATNNNNATC	2 cut(s)	601, 828
BseBI	CCWGG	3 cut(s)	984, 1230, 1341
BseDI	CCNNGG	4 cut(s)	127, 333, 1340, 1455
BseGI	GGATG	5 cut(s)	158, 613, 687, 730, 829
BseJI	GATNNNNATC	2 cut(s)	601, 828
BseLI	CCNNNNNNNGG	4 cut(s)	223, 268, 772, 1535
BseMI	GCAATG	1 cut(s)	582
BseMII	CTCAG	5 cut(s)	152, 392, 1154, 1201, 1461
BseNI	ACTGG	4 cut(s)	280, 774, 1062, 1529
BseRI	GAGGAG	1 cut(s)	1160
BseX3I	CGGCCG	1 cut(s)	306
BseXI	GCAGC	1 cut(s)	1096
Bsh1236I	CGCG	1 cut(s)	568
Bsh1285I	CGRYCG	1 cut(s)	309
BshFI	GGCC	5 cut(s)	237, 308, 317, 626, 1454
BsiEI	CGRYCG	1 cut(s)	309
BsiSI	CCGG	1 cut(s)	129
BslFI	GGGAC	1 cut(s)	554
BslI	CCNNNNNNNGG	4 cut(s)	223, 268, 772, 1535
BsmAI	GTCTC	4 cut(s)	137, 278, 992, 1196
BsmFI	GGGAC	1 cut(s)	554
BsmI	GAATGC	1 cut(s)	703
BsnI	GGCC	5 cut(s)	237, 308, 317, 626, 1454
Bso31I	GGTCTC	3 cut(s)	137, 278, 992
Bsp1286I	GDGCHC	1 cut(s)	668
Bsp143I	GATC	3 cut(s)	670, 1498, 1616
Bsp19I	CCATGG	1 cut(s)	333
BspACI	CCGC	3 cut(s)	201, 309, 1214
BspANI	GGCC	5 cut(s)	237, 308, 317, 626, 1454
BspCNI	CTCAG	5 cut(s)	151, 393, 1155, 1200, 1462
BspFNI	CGCG	1 cut(s)	568
BspLI	GGNNCC	1 cut(s)	981
BspMAI	CTGCAG	1 cut(s)	1224
BspPI	GGATC	1 cut(s)	1493
BspTI	CTTAAG	1 cut(s)	1508
BspTNI	GGTCTC	3 cut(s)	137, 278, 992
BsrDI	GCAATG	1 cut(s)	582
BsrI	ACTGG	4 cut(s)	280, 774, 1062, 1529
BssECI	CCNNGG	4 cut(s)	127, 333, 1340, 1455
BssMI	GATC	3 cut(s)	670, 1498, 1616
BssNI	GRCGYC	3 cut(s)	330, 357, 1478
BssT1I	CCWWGG	2 cut(s)	333, 1455
Bst2UI	CCWGG	3 cut(s)	984, 1230, 1341
Bst4CI	ACNGT	3 cut(s)	379, 869, 1246
Bst6I	CTCTTC	1 cut(s)	462
BstACI	GRCGYC	3 cut(s)	330, 357, 1478
BstAFI	CTTAAG	1 cut(s)	1508
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstC8I	GCNNGC	2 cut(s)	239, 1428
BstDEI	CTNAG	6 cut(s)	138, 401, 944, 1163, 1187, 1470
BstDSI	CCRYGG	1 cut(s)	333
BstF5I	GGATG	5 cut(s)	158, 613, 687, 730, 829
BstFNI	CGCG	1 cut(s)	568
BstHHI	GCGC	2 cut(s)	570, 1153
BstKTI	GATC	3 cut(s)	673, 1501, 1619
BstMAI	GTCTC	4 cut(s)	137, 278, 992, 1196
BstMBI	GATC	3 cut(s)	670, 1498, 1616
BstMCI	CGRYCG	1 cut(s)	309
BstMWI	GCNNNNNNNGC	5 cut(s)	234, 314, 323, 1159, 1513
BstNI	CCWGG	3 cut(s)	984, 1230, 1341
BstSCI	CCNGG	4 cut(s)	127, 982, 1228, 1339
BstSFI	CTRYAG	2 cut(s)	1102, 1220
BstUI	CGCG	1 cut(s)	568
BstV1I	GCAGC	1 cut(s)	1096
BstX2I	RGATCY	1 cut(s)	1498
BstYI	RGATCY	1 cut(s)	1498
BstZI	CGGCCG	1 cut(s)	306
BsuRI	GGCC	5 cut(s)	237, 308, 317, 626, 1454
BtgI	CCRYGG	1 cut(s)	333
BtgZI	GCGATG	1 cut(s)	477
BtrI	CACGTC	1 cut(s)	1631
BtsCI	GGATG	5 cut(s)	158, 613, 687, 730, 829
BtsIMutI	CAGTG	1 cut(s)	767
Cac8I	GCNNGC	2 cut(s)	239, 1428
CaiI	CAGNNNCTG	2 cut(s)	1162, 1426
CfoI	GCGC	2 cut(s)	570, 1153
Cfr13I	GGNCC	2 cut(s)	1118, 1283
CseI	GACGC	3 cut(s)	338, 346, 890
Csp6I	GTAC	4 cut(s)	303, 1016, 1055, 1418
CviAII	CATG	5 cut(s)	334, 721, 742, 901, 1211
CviQI	GTAC	4 cut(s)	303, 1016, 1055, 1418
DdeI	CTNAG	6 cut(s)	138, 401, 944, 1163, 1187, 1470
DpnI	GATC	3 cut(s)	672, 1500, 1618
DpnII	GATC	3 cut(s)	670, 1498, 1616
EaeI	YGGCCR	2 cut(s)	235, 306
EagI	CGGCCG	1 cut(s)	306
Eam1104I	CTCTTC	1 cut(s)	462
EarI	CTCTTC	1 cut(s)	462
EciI	GGCGGA	1 cut(s)	190
EclXI	CGGCCG	1 cut(s)	306
Eco130I	CCWWGG	2 cut(s)	333, 1455
Eco24I	GRGCYC	1 cut(s)	668
Eco31I	GGTCTC	3 cut(s)	137, 278, 992
Eco47I	GGWCC	2 cut(s)	1118, 1283
Eco52I	CGGCCG	1 cut(s)	306
Eco57I	CTGAAG	2 cut(s)	342, 753
EcoO109I	RGGNCCY	2 cut(s)	1118, 1283
EcoRI	GAATTC	1 cut(s)	737
EcoRII	CCWGG	3 cut(s)	982, 1228, 1339
EcoT14I	CCWWGG	2 cut(s)	333, 1455
EcoT22I	ATGCAT	1 cut(s)	604
EcoT38I	GRGCYC	1 cut(s)	668
ErhI	CCWWGG	2 cut(s)	333, 1455
FaeI	CATG	5 cut(s)	337, 724, 745, 904, 1214
FalI	AAGNNNNNCTT	4 cut(s)	746, 778, 1502, 1534
FaqI	GGGAC	1 cut(s)	554
FatI	CATG	5 cut(s)	333, 720, 741, 900, 1210
FbaI	TGATCA	1 cut(s)	670
Fnu4HI	GCNGC	2 cut(s)	309, 1085
FokI	GGATG	5 cut(s)	145, 600, 674, 737, 836
FriOI	GRGCYC	1 cut(s)	668
Fsp4HI	GCNGC	2 cut(s)	309, 1085
FspBI	CTAG	1 cut(s)	1142
GlaI	GCGC	2 cut(s)	569, 1152
GluI	GCNGC	2 cut(s)	309, 1085
GsuI	CTGGAG	1 cut(s)	791
HaeIII	GGCC	5 cut(s)	237, 308, 317, 626, 1454
HapII	CCGG	1 cut(s)	129
HgaI	GACGC	3 cut(s)	338, 346, 890
HhaI	GCGC	2 cut(s)	570, 1153
Hin1I	GRCGYC	3 cut(s)	330, 357, 1478
Hin1II	CATG	5 cut(s)	337, 724, 745, 904, 1214
Hin6I	GCGC	2 cut(s)	568, 1151
HinP1I	GCGC	2 cut(s)	568, 1151
HincII	GTYRAC	2 cut(s)	1446, 1573
HindII	GTYRAC	2 cut(s)	1446, 1573
HindIII	AAGCTT	1 cut(s)	1505
HpaI	GTTAAC	1 cut(s)	1446
HpaII	CCGG	1 cut(s)	129
HphI	GGTGA	4 cut(s)	93, 202, 268, 455
Hpy166II	GTNNAC	5 cut(s)	516, 997, 1446, 1573, 1628
Hpy188I	TCNGA	3 cut(s)	191, 322, 642
Hpy8I	GTNNAC	5 cut(s)	516, 997, 1446, 1573, 1628
Hpy99I	CGWCG	3 cut(s)	332, 350, 362
HpyAV	CCTTC	6 cut(s)	18, 205, 1309, 1339, 1444, 1642
HpyCH4III	ACNGT	3 cut(s)	379, 869, 1246
HpyCH4IV	ACGT	2 cut(s)	1478, 1630
HpyCH4V	TGCA	6 cut(s)	575, 602, 608, 701, 1084, 1222
HpyF10VI	GCNNNNNNNGC	5 cut(s)	234, 314, 323, 1159, 1513
HpyF3I	CTNAG	6 cut(s)	138, 401, 944, 1163, 1187, 1470
HpySE526I	ACGT	2 cut(s)	1478, 1630
Hsp92I	GRCGYC	3 cut(s)	330, 357, 1478
Hsp92II	CATG	5 cut(s)	337, 724, 745, 904, 1214
HspAI	GCGC	2 cut(s)	568, 1151
Ksp22I	TGATCA	1 cut(s)	670
KspAI	GTTAAC	1 cut(s)	1446
Kzo9I	GATC	3 cut(s)	670, 1498, 1616
LmnI	GCTCC	1 cut(s)	397
Lsp1109I	GCAGC	1 cut(s)	1096
LweI	GCATC	4 cut(s)	611, 1081, 1149, 1661
MaeI	CTAG	1 cut(s)	1142
MaeII	ACGT	2 cut(s)	1478, 1630
MaeIII	GTNAC	1 cut(s)	809
MalI	GATC	3 cut(s)	672, 1500, 1618
MboI	GATC	3 cut(s)	670, 1498, 1616
MflI	RGATCY	1 cut(s)	1498
MhlI	GDGCHC	1 cut(s)	668
MlsI	TGGCCA	1 cut(s)	237
MluCI	AATT	7 cut(s)	290, 737, 1000, 1008, 1030, 1074, 1276
MluNI	TGGCCA	1 cut(s)	237
MlyI	GAGTC	4 cut(s)	359, 511, 932, 1234
MmeI	TCCRAC	2 cut(s)	214, 1513
Mox20I	TGGCCA	1 cut(s)	237
Mph1103I	ATGCAT	1 cut(s)	604
MroXI	GAANNNNTTC	2 cut(s)	761, 932
MscI	TGGCCA	1 cut(s)	237
MslI	CAYNNNNRTG	2 cut(s)	818, 1412
Msp20I	TGGCCA	1 cut(s)	237
MspCI	CTTAAG	1 cut(s)	1508
MspI	CCGG	1 cut(s)	129
MspR9I	CCNGG	4 cut(s)	129, 984, 1230, 1341
Mva1269I	GAATGC	1 cut(s)	703
MvaI	CCWGG	3 cut(s)	984, 1230, 1341
MvnI	CGCG	1 cut(s)	568
MwoI	GCNNNNNNNGC	5 cut(s)	234, 314, 323, 1159, 1513
NciI	CCSGG	1 cut(s)	129
NcoI	CCATGG	1 cut(s)	333
NdeII	GATC	3 cut(s)	670, 1498, 1616
NlaIII	CATG	5 cut(s)	337, 724, 745, 904, 1214
NlaIV	GGNNCC	1 cut(s)	981
NsiI	ATGCAT	1 cut(s)	604
PcsI	WCGNNNNNNNCGW	1 cut(s)	354
PctI	GAATGC	1 cut(s)	703
PdmI	GAANNNNTTC	2 cut(s)	761, 932
PfeI	GAWTC	6 cut(s)	547, 677, 928, 1130, 1309, 1394
PflMI	CCANNNNNTGG	2 cut(s)	223, 268
PkrI	GCNGC	2 cut(s)	310, 1086
PleI	GAGTC	4 cut(s)	358, 510, 932, 1233
PpsI	GAGTC	4 cut(s)	358, 510, 932, 1233
PpuMI	RGGWCCY	2 cut(s)	1118, 1283
PshBI	ATTAAT	1 cut(s)	1590
PsiI	TTATAA	1 cut(s)	584
Psp5II	RGGWCCY	2 cut(s)	1118, 1283
Psp6I	CCWGG	3 cut(s)	982, 1228, 1339
PspGI	CCWGG	3 cut(s)	982, 1228, 1339
PspN4I	GGNNCC	1 cut(s)	981
PspPI	GGNCC	2 cut(s)	1118, 1283
PspPPI	RGGWCCY	2 cut(s)	1118, 1283
PstI	CTGCAG	1 cut(s)	1224
PstNI	CAGNNNCTG	2 cut(s)	1162, 1426
PsuI	RGATCY	1 cut(s)	1498
RsaI	GTAC	4 cut(s)	304, 1017, 1056, 1419
RsaNI	GTAC	4 cut(s)	303, 1016, 1055, 1418
RseI	CAYNNNNRTG	2 cut(s)	818, 1412
SatI	GCNGC	2 cut(s)	309, 1085
Sau3AI	GATC	3 cut(s)	670, 1498, 1616
Sau96I	GGNCC	2 cut(s)	1118, 1283
ScaI	AGTACT	1 cut(s)	1056
SchI	GAGTC	4 cut(s)	359, 511, 932, 1234
ScrFI	CCNGG	4 cut(s)	129, 984, 1230, 1341
SduI	GDGCHC	1 cut(s)	668
SfaNI	GCATC	4 cut(s)	611, 1081, 1149, 1661
SfcI	CTRYAG	2 cut(s)	1102, 1220
SfiI	GGCCNNNNNGGCC	1 cut(s)	314
SinI	GGWCC	2 cut(s)	1118, 1283
SmiMI	CAYNNNNRTG	2 cut(s)	818, 1412
SmlI	CTYRAG	2 cut(s)	989, 1508
SmoI	CTYRAG	2 cut(s)	989, 1508
Sse9I	AATT	7 cut(s)	290, 737, 1000, 1008, 1030, 1074, 1276
SsiI	CCGC	3 cut(s)	201, 309, 1214
SspMI	CTAG	1 cut(s)	1142
StyD4I	CCNGG	4 cut(s)	127, 982, 1228, 1339
StyI	CCWWGG	2 cut(s)	333, 1455
TaaI	ACNGT	3 cut(s)	379, 869, 1246
TaiI	ACGT	2 cut(s)	1481, 1633
TaqI	TCGA	6 cut(s)	345, 360, 777, 936, 1261, 1619
TasI	AATT	7 cut(s)	290, 737, 1000, 1008, 1030, 1074, 1276
TatI	WGTACW	2 cut(s)	1015, 1054
TauI	GCSGC	1 cut(s)	311
TfiI	GAWTC	6 cut(s)	547, 677, 928, 1130, 1309, 1394
TscAI	CASTG	1 cut(s)	774
TseI	GCWGC	1 cut(s)	1084
TspDTI	ATGAA	8 cut(s)	480, 730, 741, 972, 977, 1280, 1380, 1385
TspGWI	ACGGA	1 cut(s)	1570
TspRI	CASTG	1 cut(s)	774
Van91I	CCANNNNNTGG	2 cut(s)	223, 268
Vha464I	CTTAAG	1 cut(s)	1508
VpaK11BI	GGWCC	2 cut(s)	1118, 1283
VspI	ATTAAT	1 cut(s)	1590
XapI	RAATTY	1 cut(s)	737
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1462
XmnI	GAANNNNTTC	2 cut(s)	761, 932
XspI	CTAG	1 cut(s)	1142
ZraI	GACGTC	1 cut(s)	1479
ZrmI	AGTACT	1 cut(s)	1056
Zsp2I	ATGCAT	1 cut(s)	604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.