Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007278

Physical Location & Seq

Genomic Coordinates Forward (+)

47335272 .. 47339039

Gene Structure 3768 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G029270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCACTTCCCTCCATAGCAAGAAGGCTACGAACTAAACACCCCCTCTGCCAATCACTCACTCTACTCCACCACCCCATCTCTAACTCACCCTATTCTTCACCTTCTCTCCACCCCCGTCTCTCTCAGCCATTTCATCCAACATCTGTCGTTCCATCCCAAACCCCTCGCCATTTCTCTACTCTCCGACCCTTCTCCGCCGAAATCCCCCACCACCCATTGGGCTTCAATGGCCAGCGTTTCAACACAGACCACTCCCACAACTTGGGTCTCACCCAGTTTCTTGAATTGCTCACAAGTACGGCCGGTTTGGCCTCTGAAGCCGACGCCATGGCTTTTCTCGACGAGTCGGGCGTCGAGCCGAAGCGAGATACAGTCTTTCAGGCGATTTGGGAGCTGAGGGGAGATTGGAAGTTGGCGTTTTTGGGTTTCAAATGGGGTGAGAAGTGGGGCTGTTGCGATGAAGAGGCGTGTAGTTTGATGGTTTGGGTTTTCGGGAGTCACCGAAAGTTTAGTACTGCTTGGTGTTTGATACGGGATTTGAATCAGGCTTTGATTGATACGCGCCGCGCAATGCTTATAATGATTGATAGATATGCATCTGCAAATCATCCAAGTAAGGCCATTAAGACATTTCAGATAATGGAGAAGTTCAGGTTGAGCCCTGATCAAGAAGCATTCCACATCCTCTTGAATGCACTTTGTAAAAATGGAAACATGGAGGAAGCTGAAGAATTCATGCTTGTATGTAAGAAGTTCTTCCCACTGGAGGTCGAGGGCTTTAACATTGTTCTCAATGGGTGGTGTAACATATCTGTTGATGTATATCAAGCCAAGAGAGTTTGGAGAGAAATGTCTAAATACTGTATTACACCAGACGCAACTTCTTATACACACATGATTTCCTGCTTCTCAAAGGTTGGGAATCTTTTCGACTCCCTTAGACTATATGATGAAATGAAGAAAAGGGATTGGGTTCCTCGTCTCAAGGTTTACAATTCTTTAATTTATGTACTAACCCGTGAAAATTGCTTTAAGGAAGCACTCAAAGTACTGGACAAAGTGAAAGAAATTGGTTTGCAGCCAGATGCTACCACCTATAATTCAATGATAGGTCCTTTATGTGAATCAAAGAAGATAGAGGAGGCGCAACAGATGCTGAGTTCTATGATAAATGATAACCTCAGCCCAACCATAGAGACTTACCATGCATTTCTGCAGAGTCCAGGTTCAAAGGCAACTGTTGAAGTTCTTAATCGAATGAAGAAAGCTAATTTAGGTCCTAATGGCAATACCTTCCTTATGATTCTTGAAAAGTTCTTTATATTAGAACAACCTGGGAAGGCATTGGAGATTTGGAATGAAATGAAGAACTATGGAGTAGTGCCTGATTCCACACATTACACCTCTATGGTACAGGGGCTGGCAACTTGTGGGTTGTTAGCGAAGGCCAAGGAACTTTTGGCTGAGATGACGTCATATGGCATTCCGGAAGATCCAAAGCTTAAGAAGCTCTTGAAGAAGCCAATTGGAGGTAGTGTTAAAGGGAAACGGAGAGTTAGACAAGTCAACCAAGCAAAAAGGATTAATCTAAAGCAAGACAGGGTTGTGAGATCGAGAAGTCCACGTCAGTCAAGAAAGAAGAAGACATCAAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

553

Amino Acids

63.04

Weight (kDa)

9.29

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	194 - 236	4.9e-07	PPR repeat family
PPR_2	PF13041	260 - 306	4.8e-06	PPR repeat family
PPR_3	PF13812	280 - 338	3.4e-06	Pentatricopeptide repeat domain
PPR	PF01535	296 - 323	9.9e-06	PPR repeat
PPR_long	PF17177	296 - 422	1.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	331 - 375	5.7e-09	PPR repeat family
PPR_3	PF13812	350 - 407	4.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	359 - 390	1.6e-06	PPR repeat
PPR_2	PF13041	362 - 406	3.5e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80880 AT1G80880 AT1G80880
fragaria_vesca	FvH4_6g28510 FvH4_6g28510
malus_domestica	MD17G1224000.v1.1
prunus_persica	Prupe.3G099700_v2.0.a1 Prupe.3G099700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132781
rosa_laevigata	RLG00000019275 RLG00000019279 RLG00000019280 RLG00000019283
rosa_multiflora	Rmu_co8097930.1_g000001 Rmu_ssc0000074.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111670
rosa_rugosa	Rorug02G0307400 Rorug02G0307500 Rorug02G0307600 Rorug02G0307700
rosa_samantha	Rh2AG360100 Rh2BG366000 Rh2CG343400 Rh2DG383000
rosa_wichuraiana	Rw2G029270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	581
AatII	GACGTC	1 cut(s)	1478
AccB7I	CCANNNNNTGG	2 cut(s)	220, 265
AccII	CGCG	2 cut(s)	565, 570
AccIII	TCCGGA	1 cut(s)	1489
AciI	CCGC	2 cut(s)	198, 568
AclWI	GGATC	1 cut(s)	1490
AcoI	YGGCCR	2 cut(s)	232, 303
AcsI	RAATTY	1 cut(s)	734
AcuI	CTGAAG	2 cut(s)	339, 750
AcyI	GRCGYC	3 cut(s)	327, 354, 1475
AfaI	GTAC	5 cut(s)	301, 517, 1014, 1053, 1416
AfiI	CCNNNNNNNGG	4 cut(s)	220, 265, 769, 1532
AflII	CTTAAG	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	1628
AjnI	CCWGG	2 cut(s)	1225, 1336
AluBI	AGCT	5 cut(s)	397, 728, 1271, 1504, 1513
AluI	AGCT	5 cut(s)	397, 728, 1271, 1504, 1513
Alw26I	GTCTC	4 cut(s)	125, 275, 989, 1193
AlwI	GGATC	1 cut(s)	1490
AlwNI	CAGNNNCTG	2 cut(s)	1159, 1423
Aor13HI	TCCGGA	1 cut(s)	1489
AoxI	GGCC	5 cut(s)	232, 303, 312, 621, 1449
ApeKI	GCWGC	1 cut(s)	1081
ApoI	RAATTY	1 cut(s)	734
AseI	ATTAAT	1 cut(s)	1587
Asp700I	GAANNNNTTC	2 cut(s)	758, 929
AspLEI	GCGC	3 cut(s)	567, 572, 1150
AspS9I	GGNCC	2 cut(s)	1115, 1280
AsuHPI	GGTGA	5 cut(s)	81, 93, 265, 452, 494
AvaII	GGWCC	2 cut(s)	1115, 1280
BalI	TGGCCA	1 cut(s)	234
BanII	GRGCYC	1 cut(s)	665
BbsI	GAAGAC	1 cut(s)	1652
BbvCI	CCTCAGC	2 cut(s)	398, 1184
BbvI	GCAGC	1 cut(s)	1093
BccI	CCATC	3 cut(s)	86, 163, 475
BceAI	ACGGC	1 cut(s)	318
BciT130I	CCWGG	2 cut(s)	1227, 1338
BclI	TGATCA	1 cut(s)	667
BcoDI	GTCTC	4 cut(s)	125, 275, 989, 1193
BfmI	CTRYAG	1 cut(s)	1217
BfrI	CTTAAG	1 cut(s)	1505
BglI	GCCNNNNNGGC	1 cut(s)	311
BisI	GCNGC	2 cut(s)	568, 1082
BlsI	GCNGC	2 cut(s)	569, 1083
BmcAI	AGTACT	2 cut(s)	517, 1053
Bme1390I	CCNGG	2 cut(s)	1227, 1338
Bme18I	GGWCC	2 cut(s)	1115, 1280
BmgBI	CACGTC	1 cut(s)	1628
BmgT120I	GGNCC	2 cut(s)	1115, 1280
BmiI	GGNNCC	1 cut(s)	978
BmrFI	CCNGG	2 cut(s)	1227, 1338
BmrI	ACTGGG	1 cut(s)	271
BmsI	GCATC	3 cut(s)	608, 1078, 1146
BmuI	ACTGGG	1 cut(s)	271
BpiI	GAAGAC	1 cut(s)	1652
BpmI	CTGGAG	1 cut(s)	788
Bpu10I	CCTNAGC	2 cut(s)	398, 1184
BpuEI	CTTGAG	1 cut(s)	971
BsaBI	GATNNNNATC	3 cut(s)	543, 598, 825
BsaHI	GRCGYC	3 cut(s)	327, 354, 1475
BsaI	GGTCTC	1 cut(s)	275
BsaJI	CCNNGG	3 cut(s)	330, 1337, 1452
BsaWI	WCCGGW	1 cut(s)	1489
BsaXI	ACNNNNNCTCC	4 cut(s)	93, 123, 1524, 1554
Bsc4I	CCNNNNNNNGG	4 cut(s)	220, 265, 769, 1532
Bse118I	RCCGGY	1 cut(s)	305
Bse1I	ACTGG	3 cut(s)	277, 771, 1059
Bse3DI	GCAATG	1 cut(s)	579
Bse8I	GATNNNNATC	3 cut(s)	543, 598, 825
BseAI	TCCGGA	1 cut(s)	1489
BseBI	CCWGG	2 cut(s)	1227, 1338
BseDI	CCNNGG	3 cut(s)	330, 1337, 1452
BseGI	GGATG	4 cut(s)	136, 155, 610, 684
BseJI	GATNNNNATC	3 cut(s)	543, 598, 825
BseLI	CCNNNNNNNGG	4 cut(s)	220, 265, 769, 1532
BseMI	GCAATG	1 cut(s)	579
BseMII	CTCAG	5 cut(s)	140, 389, 1151, 1198, 1458
BseNI	ACTGG	3 cut(s)	277, 771, 1059
BseRI	GAGGAG	1 cut(s)	1157
BseX3I	CGGCCG	1 cut(s)	303
BseXI	GCAGC	1 cut(s)	1093
Bsh1236I	CGCG	2 cut(s)	565, 570
Bsh1285I	CGRYCG	1 cut(s)	306
BshFI	GGCC	5 cut(s)	234, 305, 314, 623, 1451
BsiEI	CGRYCG	1 cut(s)	306
BsiSI	CCGG	2 cut(s)	306, 1490
BslI	CCNNNNNNNGG	4 cut(s)	220, 265, 769, 1532
BsmAI	GTCTC	4 cut(s)	125, 275, 989, 1193
BsmBI	CGTCTC	2 cut(s)	125, 989
BsmI	GAATGC	3 cut(s)	677, 700, 1485
BsnI	GGCC	5 cut(s)	234, 305, 314, 623, 1451
Bso31I	GGTCTC	1 cut(s)	275
Bsp1286I	GDGCHC	1 cut(s)	665
Bsp13I	TCCGGA	1 cut(s)	1489
Bsp143I	GATC	3 cut(s)	667, 1495, 1613
Bsp19I	CCATGG	1 cut(s)	330
BspACI	CCGC	2 cut(s)	198, 568
BspANI	GGCC	5 cut(s)	234, 305, 314, 623, 1451
BspCNI	CTCAG	5 cut(s)	139, 390, 1152, 1197, 1459
BspEI	TCCGGA	1 cut(s)	1489
BspFNI	CGCG	2 cut(s)	565, 570
BspLI	GGNNCC	1 cut(s)	978
BspMAI	CTGCAG	1 cut(s)	1221
BspPI	GGATC	1 cut(s)	1490
BspTI	CTTAAG	1 cut(s)	1505
BspTNI	GGTCTC	1 cut(s)	275
BsrDI	GCAATG	1 cut(s)	579
BsrFI	RCCGGY	1 cut(s)	305
BsrI	ACTGG	3 cut(s)	277, 771, 1059
BssAI	RCCGGY	1 cut(s)	305
BssECI	CCNNGG	3 cut(s)	330, 1337, 1452
BssMI	GATC	3 cut(s)	667, 1495, 1613
BssNI	GRCGYC	3 cut(s)	327, 354, 1475
BssT1I	CCWWGG	2 cut(s)	330, 1452
Bst2UI	CCWGG	2 cut(s)	1227, 1338
Bst4CI	ACNGT	3 cut(s)	376, 866, 1243
Bst6I	CTCTTC	1 cut(s)	459
BstACI	GRCGYC	3 cut(s)	327, 354, 1475
BstAFI	CTTAAG	1 cut(s)	1505
BstAPI	GCANNNNNTGC	1 cut(s)	1156
BstC8I	GCNNGC	2 cut(s)	236, 1425
BstDEI	CTNAG	6 cut(s)	126, 398, 941, 1160, 1184, 1467
BstDSI	CCRYGG	1 cut(s)	330
BstF5I	GGATG	4 cut(s)	136, 155, 610, 684
BstFNI	CGCG	2 cut(s)	565, 570
BstHHI	GCGC	3 cut(s)	567, 572, 1150
BstKTI	GATC	3 cut(s)	670, 1498, 1616
BstMAI	GTCTC	4 cut(s)	125, 275, 989, 1193
BstMBI	GATC	3 cut(s)	667, 1495, 1613
BstMCI	CGRYCG	1 cut(s)	306
BstMWI	GCNNNNNNNGC	5 cut(s)	231, 311, 320, 1156, 1510
BstNI	CCWGG	2 cut(s)	1227, 1338
BstSCI	CCNGG	2 cut(s)	1225, 1336
BstSFI	CTRYAG	1 cut(s)	1217
BstUI	CGCG	2 cut(s)	565, 570
BstV1I	GCAGC	1 cut(s)	1093
BstV2I	GAAGAC	1 cut(s)	1652
BstX2I	RGATCY	1 cut(s)	1495
BstYI	RGATCY	1 cut(s)	1495
BstZI	CGGCCG	1 cut(s)	303
BsuRI	GGCC	5 cut(s)	234, 305, 314, 623, 1451
BtgI	CCRYGG	1 cut(s)	330
BtgZI	GCGATG	1 cut(s)	474
BtrI	CACGTC	1 cut(s)	1628
BtsCI	GGATG	4 cut(s)	136, 155, 610, 684
BtsIMutI	CAGTG	1 cut(s)	764
Cac8I	GCNNGC	2 cut(s)	236, 1425
CaiI	CAGNNNCTG	2 cut(s)	1159, 1423
CfoI	GCGC	3 cut(s)	567, 572, 1150
Cfr10I	RCCGGY	1 cut(s)	305
Cfr13I	GGNCC	2 cut(s)	1115, 1280
CseI	GACGC	3 cut(s)	335, 343, 887
Csp6I	GTAC	5 cut(s)	300, 516, 1013, 1052, 1415
CviAII	CATG	5 cut(s)	331, 718, 739, 898, 1208
CviQI	GTAC	5 cut(s)	300, 516, 1013, 1052, 1415
DdeI	CTNAG	6 cut(s)	126, 398, 941, 1160, 1184, 1467
DpnI	GATC	3 cut(s)	669, 1497, 1615
DpnII	GATC	3 cut(s)	667, 1495, 1613
EaeI	YGGCCR	2 cut(s)	232, 303
EagI	CGGCCG	1 cut(s)	303
Eam1104I	CTCTTC	1 cut(s)	459
EarI	CTCTTC	1 cut(s)	459
EciI	GGCGGA	1 cut(s)	187
EclXI	CGGCCG	1 cut(s)	303
Eco130I	CCWWGG	2 cut(s)	330, 1452
Eco24I	GRGCYC	1 cut(s)	665
Eco31I	GGTCTC	1 cut(s)	275
Eco47I	GGWCC	2 cut(s)	1115, 1280
Eco52I	CGGCCG	1 cut(s)	303
Eco57I	CTGAAG	2 cut(s)	339, 750
EcoO109I	RGGNCCY	2 cut(s)	1115, 1280
EcoRI	GAATTC	1 cut(s)	734
EcoRII	CCWGG	2 cut(s)	1225, 1336
EcoT14I	CCWWGG	2 cut(s)	330, 1452
EcoT22I	ATGCAT	2 cut(s)	601, 1213
EcoT38I	GRGCYC	1 cut(s)	665
ErhI	CCWWGG	2 cut(s)	330, 1452
Esp3I	CGTCTC	2 cut(s)	125, 989
FaeI	CATG	5 cut(s)	334, 721, 742, 901, 1211
FalI	AAGNNNNNCTT	4 cut(s)	743, 775, 1499, 1531
FatI	CATG	5 cut(s)	330, 717, 738, 897, 1207
FauNDI	CATATG	1 cut(s)	1480
FbaI	TGATCA	1 cut(s)	667
Fnu4HI	GCNGC	2 cut(s)	568, 1082
FokI	GGATG	4 cut(s)	123, 142, 597, 671
FriOI	GRGCYC	1 cut(s)	665
Fsp4HI	GCNGC	2 cut(s)	568, 1082
GlaI	GCGC	3 cut(s)	566, 571, 1149
GluI	GCNGC	2 cut(s)	568, 1082
GsuI	CTGGAG	1 cut(s)	788
HaeIII	GGCC	5 cut(s)	234, 305, 314, 623, 1451
HapII	CCGG	2 cut(s)	306, 1490
HgaI	GACGC	3 cut(s)	335, 343, 887
HhaI	GCGC	3 cut(s)	567, 572, 1150
Hin1I	GRCGYC	3 cut(s)	327, 354, 1475
Hin1II	CATG	5 cut(s)	334, 721, 742, 901, 1211
Hin6I	GCGC	3 cut(s)	565, 570, 1148
HinP1I	GCGC	3 cut(s)	565, 570, 1148
HincII	GTYRAC	1 cut(s)	1570
HindII	GTYRAC	1 cut(s)	1570
HindIII	AAGCTT	1 cut(s)	1502
HinfI	GANTC	9 cut(s)	347, 499, 544, 925, 935, 1127, 1222, 1306, 1391
HpaII	CCGG	2 cut(s)	306, 1490
HphI	GGTGA	5 cut(s)	81, 93, 265, 452, 494
Hpy166II	GTNNAC	3 cut(s)	994, 1570, 1625
Hpy188I	TCNGA	3 cut(s)	188, 319, 639
Hpy8I	GTNNAC	3 cut(s)	994, 1570, 1625
Hpy99I	CGWCG	3 cut(s)	329, 347, 359
HpyAV	CCTTC	6 cut(s)	18, 114, 202, 1306, 1336, 1441
HpyCH4III	ACNGT	3 cut(s)	376, 866, 1243
HpyCH4IV	ACGT	2 cut(s)	1475, 1627
HpyCH4V	TGCA	6 cut(s)	599, 605, 698, 1081, 1211, 1219
HpyF10VI	GCNNNNNNNGC	5 cut(s)	231, 311, 320, 1156, 1510
HpyF3I	CTNAG	6 cut(s)	126, 398, 941, 1160, 1184, 1467
HpySE526I	ACGT	2 cut(s)	1475, 1627
Hsp92I	GRCGYC	3 cut(s)	327, 354, 1475
Hsp92II	CATG	5 cut(s)	334, 721, 742, 901, 1211
HspAI	GCGC	3 cut(s)	565, 570, 1148
Kpn2I	TCCGGA	1 cut(s)	1489
Ksp22I	TGATCA	1 cut(s)	667
Kzo9I	GATC	3 cut(s)	667, 1495, 1613
LmnI	GCTCC	1 cut(s)	394
Lsp1109I	GCAGC	1 cut(s)	1093
LweI	GCATC	3 cut(s)	608, 1078, 1146
MaeII	ACGT	2 cut(s)	1475, 1627
MaeIII	GTNAC	2 cut(s)	500, 806
MalI	GATC	3 cut(s)	669, 1497, 1615
MboI	GATC	3 cut(s)	667, 1495, 1613
MfeI	CAATTG	1 cut(s)	1527
MflI	RGATCY	1 cut(s)	1495
MhlI	GDGCHC	1 cut(s)	665
MlsI	TGGCCA	1 cut(s)	234
MluCI	AATT	9 cut(s)	287, 734, 997, 1005, 1027, 1071, 1102, 1273, 1527
MluNI	TGGCCA	1 cut(s)	234
MlyI	GAGTC	4 cut(s)	356, 508, 929, 1231
MmeI	TCCRAC	2 cut(s)	164, 211
Mox20I	TGGCCA	1 cut(s)	234
Mph1103I	ATGCAT	2 cut(s)	601, 1213
MroI	TCCGGA	1 cut(s)	1489
MroXI	GAANNNNTTC	2 cut(s)	758, 929
MscI	TGGCCA	1 cut(s)	234
MseI	TTAA	8 cut(s)	627, 783, 1004, 1035, 1254, 1506, 1542, 1587
MslI	CAYNNNNRTG	1 cut(s)	1409
Msp20I	TGGCCA	1 cut(s)	234
MspCI	CTTAAG	1 cut(s)	1505
MspI	CCGG	2 cut(s)	306, 1490
MspR9I	CCNGG	2 cut(s)	1227, 1338
MteI	GCGCNGCGC	1 cut(s)	568
MunI	CAATTG	1 cut(s)	1527
Mva1269I	GAATGC	3 cut(s)	677, 700, 1485
MvaI	CCWGG	2 cut(s)	1227, 1338
MvnI	CGCG	2 cut(s)	565, 570
MwoI	GCNNNNNNNGC	5 cut(s)	231, 311, 320, 1156, 1510
NcoI	CCATGG	1 cut(s)	330
NdeI	CATATG	1 cut(s)	1480
NdeII	GATC	3 cut(s)	667, 1495, 1613
NlaIII	CATG	5 cut(s)	334, 721, 742, 901, 1211
NlaIV	GGNNCC	1 cut(s)	978
NmuCI	GTSAC	1 cut(s)	500
NsiI	ATGCAT	2 cut(s)	601, 1213
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PctI	GAATGC	3 cut(s)	677, 700, 1485
PdmI	GAANNNNTTC	2 cut(s)	758, 929
PfeI	GAWTC	5 cut(s)	544, 925, 1127, 1306, 1391
PflMI	CCANNNNNTGG	2 cut(s)	220, 265
PkrI	GCNGC	2 cut(s)	569, 1083
PleI	GAGTC	4 cut(s)	355, 507, 929, 1230
PpsI	GAGTC	4 cut(s)	355, 507, 929, 1230
PpuMI	RGGWCCY	2 cut(s)	1115, 1280
PshBI	ATTAAT	1 cut(s)	1587
PsiI	TTATAA	1 cut(s)	581
Psp5II	RGGWCCY	2 cut(s)	1115, 1280
Psp6I	CCWGG	2 cut(s)	1225, 1336
PspGI	CCWGG	2 cut(s)	1225, 1336
PspN4I	GGNNCC	1 cut(s)	978
PspPI	GGNCC	2 cut(s)	1115, 1280
PspPPI	RGGWCCY	2 cut(s)	1115, 1280
PstI	CTGCAG	1 cut(s)	1221
PstNI	CAGNNNCTG	2 cut(s)	1159, 1423
PsuI	RGATCY	1 cut(s)	1495
RsaI	GTAC	5 cut(s)	301, 517, 1014, 1053, 1416
RsaNI	GTAC	5 cut(s)	300, 516, 1013, 1052, 1415
RseI	CAYNNNNRTG	1 cut(s)	1409
SaqAI	TTAA	8 cut(s)	627, 783, 1004, 1035, 1254, 1506, 1542, 1587
SatI	GCNGC	2 cut(s)	568, 1082
Sau3AI	GATC	3 cut(s)	667, 1495, 1613
Sau96I	GGNCC	2 cut(s)	1115, 1280
ScaI	AGTACT	2 cut(s)	517, 1053
SchI	GAGTC	4 cut(s)	356, 508, 929, 1231
ScrFI	CCNGG	2 cut(s)	1227, 1338
SduI	GDGCHC	1 cut(s)	665
SfaNI	GCATC	3 cut(s)	608, 1078, 1146
SfcI	CTRYAG	1 cut(s)	1217
SfiI	GGCCNNNNNGGCC	1 cut(s)	311
SinI	GGWCC	2 cut(s)	1115, 1280
SmiMI	CAYNNNNRTG	1 cut(s)	1409
SmlI	CTYRAG	2 cut(s)	986, 1505
SmoI	CTYRAG	2 cut(s)	986, 1505
Sse9I	AATT	9 cut(s)	287, 734, 997, 1005, 1027, 1071, 1102, 1273, 1527
SsiI	CCGC	2 cut(s)	198, 568
StyD4I	CCNGG	2 cut(s)	1225, 1336
StyI	CCWWGG	2 cut(s)	330, 1452
TaaI	ACNGT	3 cut(s)	376, 866, 1243
TaiI	ACGT	2 cut(s)	1478, 1630
TaqI	TCGA	6 cut(s)	342, 357, 774, 933, 1258, 1616
TasI	AATT	9 cut(s)	287, 734, 997, 1005, 1027, 1071, 1102, 1273, 1527
TatI	WGTACW	3 cut(s)	515, 1012, 1051
TauI	GCSGC	1 cut(s)	570
TfiI	GAWTC	5 cut(s)	544, 925, 1127, 1306, 1391
Tru1I	TTAA	8 cut(s)	627, 783, 1004, 1035, 1254, 1506, 1542, 1587
Tru9I	TTAA	8 cut(s)	627, 783, 1004, 1035, 1254, 1506, 1542, 1587
TscAI	CASTG	1 cut(s)	771
TseFI	GTSAC	1 cut(s)	500
TseI	GCWGC	1 cut(s)	1081
Tsp45I	GTSAC	1 cut(s)	500
TspDTI	ATGAA	8 cut(s)	125, 477, 727, 969, 974, 1277, 1377, 1382
TspGWI	ACGGA	1 cut(s)	1567
TspRI	CASTG	1 cut(s)	771
Van91I	CCANNNNNTGG	2 cut(s)	220, 265
Vha464I	CTTAAG	1 cut(s)	1505
VpaK11BI	GGWCC	2 cut(s)	1115, 1280
VspI	ATTAAT	1 cut(s)	1587
XapI	RAATTY	1 cut(s)	734
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmnI	GAANNNNTTC	2 cut(s)	758, 929
ZraI	GACGTC	1 cut(s)	1476
ZrmI	AGTACT	2 cut(s)	517, 1053
Zsp2I	ATGCAT	2 cut(s)	601, 1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.