RLG00000022377

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0004777
Physical Location & Seq
Forward (+)
82959626 .. 82959967
342 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022377

Sequence Viewer

Length: 342 bp
ATGGCCACGAGCAGTTACGGTGATCCACTGGAGCGCATAGAGAGGATGGCGTCGGAGAACGCGGTGGTGATATTCAGCATCAGCAGCTGTTGCATGTGTCACGCCATCAAAAGGCTCTTCTGCGGCATGGGGGTCAATCCAACGGTGTACGAGCTCGACGAGGATCCCAGAGGAGGCAAGGACTTGGAGAAGGCTCTGATGAGGATCTTGGGGACCTCCAACGCTGTGCCGGTGGTCTTTATTGGTGGGAAGCTCGTCGGAACCATGGACAGAGTCATGGCCTCGCACATTAATGGCTCGCTTGTCCCTCTTCTCAAAGAGGCTGGGGCTCTCTGGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

114

Amino Acids

12.17

Weight (kDa)

6.07

Isoelectric Point (pI)

38.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 22 - 86 6.6e-14 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 62
AciI CCGC 2 cut(s) 62, 123
AclWI GGATC 4 cut(s) 17, 158, 171, 212
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 50
AfaI GTAC 1 cut(s) 149
AfiI CCNNNNNNNGG 2 cut(s) 111, 173
AluBI AGCT 3 cut(s) 87, 154, 253
AluI AGCT 3 cut(s) 87, 154, 253
Alw21I GWGCWC 1 cut(s) 156
AlwI GGATC 4 cut(s) 17, 158, 171, 212
AlwNI CAGNNNCTG 1 cut(s) 87
AoxI GGCC 2 cut(s) 3, 279
ApeKI GCWGC 1 cut(s) 84
AseI ATTAAT 1 cut(s) 291
AspLEI GCGC 1 cut(s) 36
AspS9I GGNCC 1 cut(s) 213
AsuHPI GGTGA 2 cut(s) 32, 79
AvaII GGWCC 1 cut(s) 213
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 163
BanII GRGCYC 2 cut(s) 156, 331
BauI CACGAG 1 cut(s) 7
Bbv12I GWGCWC 1 cut(s) 156
BbvI GCAGC 1 cut(s) 96
BccI CCATC 2 cut(s) 40, 113
BisI GCNGC 2 cut(s) 85, 124
BlsI GCNGC 2 cut(s) 86, 125
Bme18I GGWCC 1 cut(s) 213
BmgT120I GGNCC 1 cut(s) 213
BmiI GGNNCC 3 cut(s) 165, 214, 262
BmsI GCATC 1 cut(s) 87
BpmI CTGGAG 1 cut(s) 50
BsaBI GATNNNNATC 1 cut(s) 203
BsaHI GRCGYC 1 cut(s) 50
BsaJI CCNNGG 1 cut(s) 264
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 173
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 33
Bse8I GATNNNNATC 1 cut(s) 203
BseDI CCNNGG 1 cut(s) 264
BseGI GGATG 1 cut(s) 51
BseJI GATNNNNATC 1 cut(s) 203
BseLI CCNNNNNNNGG 2 cut(s) 111, 173
BseNI ACTGG 1 cut(s) 33
BseRI GAGGAG 1 cut(s) 186
BseXI GCAGC 1 cut(s) 96
BseYI CCCAGC 1 cut(s) 323
Bsh1236I CGCG 1 cut(s) 62
BshFI GGCC 2 cut(s) 5, 281
BsiHKAI GWGCWC 1 cut(s) 156
BsiSI CCGG 1 cut(s) 230
BslFI GGGAC 2 cut(s) 226, 290
BslI CCNNNNNNNGG 2 cut(s) 111, 173
BsmFI GGGAC 2 cut(s) 226, 290
BsnI GGCC 2 cut(s) 5, 281
Bsp1286I GDGCHC 2 cut(s) 156, 331
Bsp143I GATC 3 cut(s) 22, 163, 204
Bsp19I CCATGG 1 cut(s) 264
BspACI CCGC 2 cut(s) 62, 123
BspANI GGCC 2 cut(s) 5, 281
BspFNI CGCG 1 cut(s) 62
BspLI GGNNCC 3 cut(s) 165, 214, 262
BspPI GGATC 4 cut(s) 17, 158, 171, 212
BspQI GCTCTTC 1 cut(s) 122
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 1 cut(s) 33
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 1 cut(s) 264
BssMI GATC 3 cut(s) 22, 163, 204
BssNI GRCGYC 1 cut(s) 50
BssSI CACGAG 1 cut(s) 7
BssT1I CCWWGG 1 cut(s) 264
Bst2BI CACGAG 1 cut(s) 7
Bst4CI ACNGT 2 cut(s) 20, 145
Bst6I CTCTTC 2 cut(s) 122, 315
BstACI GRCGYC 1 cut(s) 50
BstAPI GCANNNNNTGC 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 299
BstDSI CCRYGG 1 cut(s) 264
BstF5I GGATG 1 cut(s) 51
BstFNI CGCG 1 cut(s) 62
BstHHI GCGC 1 cut(s) 36
BstKTI GATC 3 cut(s) 25, 166, 207
BstMBI GATC 3 cut(s) 22, 163, 204
BstMWI GCNNNNNNNGC 2 cut(s) 84, 90
BstNSI RCATGY 1 cut(s) 97
BstUI CGCG 1 cut(s) 62
BstV1I GCAGC 1 cut(s) 96
BstX2I RGATCY 2 cut(s) 163, 204
BstYI RGATCY 2 cut(s) 163, 204
BsuRI GGCC 2 cut(s) 5, 281
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 1 cut(s) 51
BtsIMutI CAGTG 1 cut(s) 26
Cac8I GCNNGC 1 cut(s) 299
CaiI CAGNNNCTG 1 cut(s) 87
CfoI GCGC 1 cut(s) 36
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 1 cut(s) 213
CseI GACGC 1 cut(s) 39
Csp6I GTAC 1 cut(s) 148
CviAII CATG 4 cut(s) 94, 127, 265, 277
CviQI GTAC 1 cut(s) 148
DpnI GATC 3 cut(s) 24, 165, 206
DpnII GATC 3 cut(s) 22, 163, 204
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 122, 315
EarI CTCTTC 2 cut(s) 122, 315
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 2 cut(s) 156, 331
Eco47I GGWCC 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 154
EcoICRI GAGCTC 1 cut(s) 154
EcoO109I RGGNCCY 1 cut(s) 213
EcoT14I CCWWGG 1 cut(s) 264
EcoT38I GRGCYC 2 cut(s) 156, 331
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 4 cut(s) 97, 130, 268, 280
FaiI YATR 5 cut(s) 38, 95, 128, 266, 278
FaqI GGGAC 2 cut(s) 226, 290
FatI CATG 4 cut(s) 93, 126, 264, 276
Fnu4HI GCNGC 2 cut(s) 85, 124
FokI GGATG 1 cut(s) 58
FriOI GRGCYC 2 cut(s) 156, 331
Fsp4HI GCNGC 2 cut(s) 85, 124
GlaI GCGC 1 cut(s) 35
GluI GCNGC 2 cut(s) 85, 124
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 1 cut(s) 50
HaeIII GGCC 2 cut(s) 5, 281
HapII CCGG 1 cut(s) 230
HgaI GACGC 1 cut(s) 39
HhaI GCGC 1 cut(s) 36
Hin1I GRCGYC 1 cut(s) 50
Hin1II CATG 4 cut(s) 97, 130, 268, 280
Hin6I GCGC 1 cut(s) 34
HinP1I GCGC 1 cut(s) 34
HinfI GANTC 1 cut(s) 273
HpaII CCGG 1 cut(s) 230
HphI GGTGA 2 cut(s) 32, 79
Hpy166II GTNNAC 1 cut(s) 148
Hpy188I TCNGA 4 cut(s) 55, 198, 260, 341
Hpy8I GTNNAC 1 cut(s) 148
Hpy99I CGWCG 3 cut(s) 55, 161, 260
HpyAV CCTTC 1 cut(s) 184
HpyCH4III ACNGT 2 cut(s) 20, 145
HpyCH4V TGCA 1 cut(s) 93
HpyF10VI GCNNNNNNNGC 2 cut(s) 84, 90
Hsp92I GRCGYC 1 cut(s) 50
Hsp92II CATG 4 cut(s) 97, 130, 268, 280
HspAI GCGC 1 cut(s) 34
Kzo9I GATC 3 cut(s) 22, 163, 204
LguI GCTCTTC 1 cut(s) 122
LmnI GCTCC 1 cut(s) 31
LpnPI CCDG 5 cut(s) 14, 181, 243, 309, 319
Lsp1109I GCAGC 1 cut(s) 96
LweI GCATC 1 cut(s) 87
MaeIII GTNAC 2 cut(s) 14, 98
MalI GATC 3 cut(s) 24, 165, 206
MboI GATC 3 cut(s) 22, 163, 204
MboII GAAGA 2 cut(s) 109, 302
MflI RGATCY 2 cut(s) 163, 204
MhlI GDGCHC 2 cut(s) 156, 331
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 282
MmeI TCCRAC 4 cut(s) 33, 164, 238, 243
MnlI CCTC 9 cut(s) 36, 154, 164, 167, 195, 226, 292, 313, 318
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 291
MslI CAYNNNNRTG 1 cut(s) 291
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 1 cut(s) 230
MvnI CGCG 1 cut(s) 62
MwoI GCNNNNNNNGC 2 cut(s) 84, 90
NcoI CCATGG 1 cut(s) 264
NdeII GATC 3 cut(s) 22, 163, 204
NlaIII CATG 4 cut(s) 97, 130, 268, 280
NlaIV GGNNCC 3 cut(s) 165, 214, 262
NmuCI GTSAC 1 cut(s) 98
NspI RCATGY 1 cut(s) 97
PciSI GCTCTTC 1 cut(s) 122
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PflFI GACNNNGTC 1 cut(s) 272
PkrI GCNGC 2 cut(s) 86, 125
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
PpuMI RGGWCCY 1 cut(s) 213
PshBI ATTAAT 1 cut(s) 291
Psp124BI GAGCTC 1 cut(s) 156
Psp5II RGGWCCY 1 cut(s) 213
PspFI CCCAGC 1 cut(s) 323
PspN4I GGNNCC 3 cut(s) 165, 214, 262
PspPI GGNCC 1 cut(s) 213
PspPPI RGGWCCY 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 87
PsuI RGATCY 2 cut(s) 163, 204
PsyI GACNNNGTC 1 cut(s) 272
PvuII CAGCTG 1 cut(s) 87
RsaI GTAC 1 cut(s) 149
RsaNI GTAC 1 cut(s) 148
RseI CAYNNNNRTG 1 cut(s) 291
SacI GAGCTC 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 122
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 2 cut(s) 85, 124
Sau3AI GATC 3 cut(s) 22, 163, 204
Sau96I GGNCC 1 cut(s) 213
SchI GAGTC 1 cut(s) 282
SduI GDGCHC 2 cut(s) 156, 331
SetI ASST 4 cut(s) 89, 156, 218, 255
SfaNI GCATC 1 cut(s) 87
SinI GGWCC 1 cut(s) 213
SmiMI CAYNNNNRTG 1 cut(s) 291
SsiI CCGC 2 cut(s) 62, 123
SstI GAGCTC 1 cut(s) 156
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 2 cut(s) 20, 145
TaqI TCGA 1 cut(s) 156
TauI GCSGC 1 cut(s) 126
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TscAI CASTG 1 cut(s) 33
TseFI GTSAC 1 cut(s) 98
TseI GCWGC 1 cut(s) 84
Tsp45I GTSAC 1 cut(s) 98
TspRI CASTG 1 cut(s) 33
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 213
VspI ATTAAT 1 cut(s) 291
XceI RCATGY 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.