RLG00000022969

protein DJ-1 homolog D-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
16012518 .. 16015189
2672 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022969

Sequence Viewer

Length: 990 bp
ATGTGGACCGGGAAAGGTGAACATCGCGTTCTGTTACTACGCGGGGACTACATGGAAGACCACGAGGCCACGGTCCCCTTTCAAACACTGCAGGCCTATGGAGTCACTGTTGACGCCGTCTGTCCCGGCATGAAAGCCGGTGACTACTGCCGCACCGCCATTCATCAACACACTGCTGCTCACCAGACTCATCCGGAATCACGTGGTCACCACTTTGCTTTGAATGCAACGTTTGATGACATTGAATATCTTGCTATGGATGCATCGGTTTTAGAATTGGTCAACAAGTTTGCCGCGTCCAGGAAGATAATTGCTGCTATGGGCCGTGGGGTATTGGTCTTAGCAGCTGCAGGCCTGGTTAAGGGGCGCAACTGCACAGGGTTCCCACCTATGAGACCTGTACTCGTTGCTGGGGGTGCTCAATGGGTGGAACCTGATACCATGGGGACGTGTATCGCCGATGGTAATATAATTACTGGGGCATTGGGAGGACACATAATTAGTTCAGAGAGAAGGATCCTGTTTCTCTGTGGACATCCAACACTTGGATGCCATGTTGATGCAGTTTGCCCCAAGAGGAAAGCTGGCGATGTATGTGCAACTGCAGTCCATGATTTTGAAGGTGACCAAACCTACAGTGAGAAGCCAGGCCATAATTTCATTTTGACAGCCAACTTTGAAACTATAGATGCCACAAGGTACGATGCTCTTGTAGTCCCTGGAGGTCGTGCCCCAGAGTATTTGGCATTGAATGAGAAGGTTATTGCATTAGTGAAACATTTTATGGGAGCAAGGAAACCAGTTGCATCCATTTGCCAGGTTCAGCAGATTTTAGCTGCTGCTGGTGTTCTGCAGGGAAGGAAATGTACTGCACAATGGGTGGAACCTGATCCAATAGATGGAAATCTGGTAACTGGAGCTGTTTGGCTGGGCCATCCCGACTTCATTTCTCAGTTGATGGCGTTGCTTGCTGTTCAAGTATCATTCTAA

Protein Analysis

330

Amino Acids

35.35

Weight (kDa)

6.3

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DJ-1_PfpI PF01965 8 - 162 2.6e-21 DJ-1/PfpI family
DJ-1_PfpI PF01965 183 - 320 8.3e-25 DJ-1/PfpI family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 545, 899
AccII CGCG 3 cut(s) 27, 42, 296
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 4 cut(s) 42, 151, 156, 294
AclI AACGTT 1 cut(s) 230
AclWI GGATC 3 cut(s) 511, 524, 884
AcvI CACGTG 1 cut(s) 203
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 3 cut(s) 402, 701, 868
AfiI CCNNNNNNNGG 4 cut(s) 300, 361, 545, 899
AflIII ACRYGT 1 cut(s) 449
AgsI TTSAA 7 cut(s) 83, 223, 245, 620, 680, 751, 977
AjiI CACGTC 1 cut(s) 450
AjnI CCWGG 5 cut(s) 299, 354, 646, 718, 816
AluBI AGCT 4 cut(s) 347, 584, 836, 920
AluI AGCT 4 cut(s) 347, 584, 836, 920
Alw21I GWGCWC 1 cut(s) 421
Alw26I GTCTC 1 cut(s) 388
AlwI GGATC 3 cut(s) 511, 524, 884
Aor13HI TCCGGA 1 cut(s) 193
AoxI GGCC 6 cut(s) 66, 93, 322, 352, 649, 931
ApeKI GCWGC 6 cut(s) 176, 314, 344, 347, 836, 839
AspLEI GCGC 1 cut(s) 369
AspS9I GGNCC 4 cut(s) 6, 73, 322, 931
AsuC2I CCSGG 2 cut(s) 10, 126
AsuHPI GGTGA 5 cut(s) 29, 152, 173, 200, 635
AvaII GGWCC 2 cut(s) 6, 73
BaeGI GKGCMC 1 cut(s) 733
BamHI GGATCC 1 cut(s) 516
BarI GAAGNNNNNNTAC 2 cut(s) 850, 882
BauI CACGAG 1 cut(s) 62
BbrPI CACGTG 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 63
Bbv12I GWGCWC 1 cut(s) 421
BbvI GCAGC 6 cut(s) 163, 301, 334, 356, 823, 826
BccI CCATC 4 cut(s) 455, 893, 942, 952
BceAI ACGGC 2 cut(s) 101, 309
BcgI CGANNNNNNTGC 2 cut(s) 578, 612
BciT130I CCWGG 5 cut(s) 301, 356, 648, 720, 818
BcnI CCSGG 2 cut(s) 10, 126
BcoDI GTCTC 1 cut(s) 388
BfmI CTRYAG 6 cut(s) 89, 348, 603, 634, 684, 851
BisI GCNGC 8 cut(s) 151, 177, 294, 315, 345, 348, 837, 840
BlsI GCNGC 8 cut(s) 152, 178, 295, 316, 346, 349, 838, 841
Bme1390I CCNGG 7 cut(s) 10, 126, 301, 356, 648, 720, 818
Bme18I GGWCC 2 cut(s) 6, 73
BmgBI CACGTC 1 cut(s) 450
BmgT120I GGNCC 4 cut(s) 6, 73, 322, 931
BmiI GGNNCC 5 cut(s) 75, 383, 432, 518, 885
BmrFI CCNGG 7 cut(s) 10, 126, 301, 356, 648, 720, 818
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 7 cut(s) 250, 272, 539, 550, 679, 694, 815
BmuI ACTGGG 1 cut(s) 486
BpiI GAAGAC 1 cut(s) 63
BpmI CTGGAG 2 cut(s) 741, 936
BpuMI CCSGG 2 cut(s) 10, 126
BsaAI YACGTR 1 cut(s) 203
BsaBI GATNNNNATC 1 cut(s) 903
BsaHI GRCGYC 1 cut(s) 114
BsaI GGTCTC 1 cut(s) 388
BsaJI CCNNGG 4 cut(s) 69, 325, 441, 718
BsaWI WCCGGW 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 4 cut(s) 300, 361, 545, 899
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 3 cut(s) 481, 800, 919
Bse8I GATNNNNATC 1 cut(s) 903
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 5 cut(s) 301, 356, 648, 720, 818
BseDI CCNNGG 4 cut(s) 69, 325, 441, 718
BseGI GGATG 6 cut(s) 190, 265, 535, 554, 806, 934
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 4 cut(s) 300, 361, 545, 899
BseMII CTCAG 1 cut(s) 965
BseNI ACTGG 3 cut(s) 481, 800, 919
BseSI GKGCMC 1 cut(s) 733
BseXI GCAGC 6 cut(s) 163, 301, 334, 356, 823, 826
BseYI CCCAGC 2 cut(s) 410, 928
BsgI GTGCAG 2 cut(s) 358, 855
Bsh1236I CGCG 3 cut(s) 27, 42, 296
BshFI GGCC 6 cut(s) 68, 95, 324, 354, 651, 933
BsiHKAI GWGCWC 1 cut(s) 421
BsiSI CCGG 4 cut(s) 9, 126, 138, 194
BslFI GGGAC 5 cut(s) 59, 59, 108, 460, 701
BslI CCNNNNNNNGG 4 cut(s) 300, 361, 545, 899
BsmAI GTCTC 1 cut(s) 388
BsmFI GGGAC 5 cut(s) 59, 59, 108, 460, 701
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 6 cut(s) 68, 95, 324, 354, 651, 933
Bso31I GGTCTC 1 cut(s) 388
Bsp1286I GDGCHC 2 cut(s) 421, 733
Bsp13I TCCGGA 1 cut(s) 193
Bsp143I GATC 2 cut(s) 516, 889
Bsp19I CCATGG 1 cut(s) 441
BspACI CCGC 4 cut(s) 42, 151, 156, 294
BspANI GGCC 6 cut(s) 68, 95, 324, 354, 651, 933
BspCNI CTCAG 1 cut(s) 964
BspEI TCCGGA 1 cut(s) 193
BspFNI CGCG 3 cut(s) 27, 42, 296
BspLI GGNNCC 5 cut(s) 75, 383, 432, 518, 885
BspMAI CTGCAG 4 cut(s) 93, 352, 607, 855
BspPI GGATC 3 cut(s) 511, 524, 884
BspTNI GGTCTC 1 cut(s) 388
BsrFI RCCGGY 1 cut(s) 137
BsrI ACTGG 3 cut(s) 481, 800, 919
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 4 cut(s) 69, 325, 441, 718
BssMI GATC 2 cut(s) 516, 889
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 1 cut(s) 62
BssT1I CCWWGG 1 cut(s) 441
Bst2BI CACGAG 1 cut(s) 62
Bst2UI CCWGG 5 cut(s) 301, 356, 648, 720, 818
Bst4CI ACNGT 3 cut(s) 73, 109, 638
BstACI GRCGYC 1 cut(s) 114
BstBAI YACGTR 1 cut(s) 203
BstC8I GCNNGC 4 cut(s) 93, 352, 586, 969
BstDEI CTNAG 2 cut(s) 340, 951
BstDSI CCRYGG 3 cut(s) 69, 325, 441
BstEII GGTNACC 2 cut(s) 206, 623
BstENI CCTNNNNNAGG 1 cut(s) 359
BstF5I GGATG 6 cut(s) 190, 265, 535, 554, 806, 934
BstFNI CGCG 3 cut(s) 27, 42, 296
BstHHI GCGC 1 cut(s) 369
BstKTI GATC 2 cut(s) 519, 892
BstMAI GTCTC 1 cut(s) 388
BstMBI GATC 2 cut(s) 516, 889
BstMWI GCNNNNNNNGC 4 cut(s) 224, 260, 416, 968
BstNI CCWGG 5 cut(s) 301, 356, 648, 720, 818
BstPI GGTNACC 2 cut(s) 206, 623
BstSCI CCNGG 7 cut(s) 8, 124, 299, 354, 646, 718, 816
BstSFI CTRYAG 6 cut(s) 89, 348, 603, 634, 684, 851
BstSLI GKGCMC 1 cut(s) 733
BstUI CGCG 3 cut(s) 27, 42, 296
BstV1I GCAGC 6 cut(s) 163, 301, 334, 356, 823, 826
BstV2I GAAGAC 1 cut(s) 63
BstX2I RGATCY 1 cut(s) 516
BstYI RGATCY 1 cut(s) 516
BsuRI GGCC 6 cut(s) 68, 95, 324, 354, 651, 933
BtgI CCRYGG 3 cut(s) 69, 325, 441
BtgZI GCGATG 2 cut(s) 8, 603
BtrI CACGTC 1 cut(s) 450
BtsCI GGATG 6 cut(s) 190, 265, 535, 554, 806, 934
BtsI GCAGTG 2 cut(s) 86, 171
BtsIMutI CAGTG 4 cut(s) 86, 105, 171, 643
Cac8I GCNNGC 4 cut(s) 93, 352, 586, 969
CfoI GCGC 1 cut(s) 369
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 4 cut(s) 6, 73, 322, 931
CseI GACGC 2 cut(s) 122, 285
Csp6I GTAC 3 cut(s) 401, 700, 867
CviAII CATG 5 cut(s) 52, 130, 442, 554, 611
CviQI GTAC 3 cut(s) 401, 700, 867
DdeI CTNAG 2 cut(s) 340, 951
DpnI GATC 2 cut(s) 518, 891
DpnII GATC 2 cut(s) 516, 889
Eco130I CCWWGG 1 cut(s) 441
Eco147I AGGCCT 2 cut(s) 95, 354
Eco31I GGTCTC 1 cut(s) 388
Eco47I GGWCC 2 cut(s) 6, 73
Eco72I CACGTG 1 cut(s) 203
Eco91I GGTNACC 2 cut(s) 206, 623
EcoNI CCTNNNNNAGG 1 cut(s) 359
EcoO65I GGTNACC 2 cut(s) 206, 623
EcoRII CCWGG 5 cut(s) 299, 354, 646, 718, 816
EcoT14I CCWWGG 1 cut(s) 441
EcoT22I ATGCAT 1 cut(s) 265
ErhI CCWWGG 1 cut(s) 441
FaeI CATG 5 cut(s) 55, 133, 445, 557, 614
FaqI GGGAC 5 cut(s) 59, 59, 108, 460, 701
FatI CATG 5 cut(s) 51, 129, 441, 553, 610
FauI CCCGC 1 cut(s) 35
Fnu4HI GCNGC 8 cut(s) 151, 177, 294, 315, 345, 348, 837, 840
FokI GGATG 6 cut(s) 177, 272, 522, 561, 793, 921
Fsp4HI GCNGC 8 cut(s) 151, 177, 294, 315, 345, 348, 837, 840
GlaI GCGC 1 cut(s) 368
GluI GCNGC 8 cut(s) 151, 177, 294, 315, 345, 348, 837, 840
GsaI CCCAGC 2 cut(s) 414, 932
GsuI CTGGAG 2 cut(s) 741, 936
HaeIII GGCC 6 cut(s) 68, 95, 324, 354, 651, 933
HapII CCGG 4 cut(s) 9, 126, 138, 194
HgaI GACGC 2 cut(s) 122, 285
HhaI GCGC 1 cut(s) 369
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 5 cut(s) 55, 133, 445, 557, 614
Hin6I GCGC 1 cut(s) 367
HinP1I GCGC 1 cut(s) 367
HincII GTYRAC 2 cut(s) 112, 283
HindII GTYRAC 2 cut(s) 112, 283
HinfI GANTC 3 cut(s) 102, 187, 197
HpaII CCGG 4 cut(s) 9, 126, 138, 194
HphI GGTGA 5 cut(s) 29, 152, 173, 200, 635
Hpy166II GTNNAC 5 cut(s) 6, 20, 112, 283, 533
Hpy188I TCNGA 1 cut(s) 508
Hpy188III TCNNGA 2 cut(s) 194, 938
Hpy8I GTNNAC 5 cut(s) 6, 20, 112, 283, 533
HpyAV CCTTC 4 cut(s) 507, 614, 751, 852
HpyCH4III ACNGT 3 cut(s) 73, 109, 638
HpyCH4IV ACGT 3 cut(s) 202, 230, 449
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 260, 416, 968
HpyF3I CTNAG 2 cut(s) 340, 951
HpySE526I ACGT 3 cut(s) 202, 230, 449
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 5 cut(s) 55, 133, 445, 557, 614
HspAI GCGC 1 cut(s) 367
Kpn2I TCCGGA 1 cut(s) 193
Kzo9I GATC 2 cut(s) 516, 889
LmnI GCTCC 2 cut(s) 788, 917
Lsp1109I GCAGC 6 cut(s) 163, 301, 334, 356, 823, 826
LweI GCATC 7 cut(s) 250, 272, 539, 550, 679, 694, 815
MaeII ACGT 3 cut(s) 202, 230, 449
MaeIII GTNAC 6 cut(s) 33, 103, 140, 206, 623, 910
MalI GATC 2 cut(s) 518, 891
MboI GATC 2 cut(s) 516, 889
MboII GAAGA 2 cut(s) 68, 316
MflI RGATCY 1 cut(s) 516
MhlI GDGCHC 2 cut(s) 421, 733
MluCI AATT 5 cut(s) 275, 309, 471, 498, 655
MlyI GAGTC 2 cut(s) 111, 181
MmeI TCCRAC 1 cut(s) 563
MnlI CCTC 4 cut(s) 58, 482, 570, 716
Mph1103I ATGCAT 1 cut(s) 265
MroI TCCGGA 1 cut(s) 193
MseI TTAA 1 cut(s) 360
MslI CAYNNNNRTG 2 cut(s) 547, 558
MspA1I CMGCKG 1 cut(s) 347
MspI CCGG 4 cut(s) 9, 126, 138, 194
MspR9I CCNGG 7 cut(s) 10, 126, 301, 356, 648, 720, 818
Mva1269I GAATGC 1 cut(s) 229
MvaI CCWGG 5 cut(s) 301, 356, 648, 720, 818
MvnI CGCG 3 cut(s) 27, 42, 296
MwoI GCNNNNNNNGC 4 cut(s) 224, 260, 416, 968
NciI CCSGG 2 cut(s) 10, 126
NcoI CCATGG 1 cut(s) 441
NdeII GATC 2 cut(s) 516, 889
NlaIII CATG 5 cut(s) 55, 133, 445, 557, 614
NlaIV GGNNCC 5 cut(s) 75, 383, 432, 518, 885
NmuCI GTSAC 4 cut(s) 103, 140, 206, 623
NsiI ATGCAT 1 cut(s) 265
PceI AGGCCT 2 cut(s) 95, 354
PctI GAATGC 1 cut(s) 229
PfeI GAWTC 1 cut(s) 197
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 2 cut(s) 545, 899
PfoI TCCNGGA 1 cut(s) 299
PkrI GCNGC 8 cut(s) 152, 178, 295, 316, 346, 349, 838, 841
PleI GAGTC 2 cut(s) 110, 181
PmaCI CACGTG 1 cut(s) 203
PmlI CACGTG 1 cut(s) 203
PpsI GAGTC 2 cut(s) 110, 181
Ppu21I YACGTR 1 cut(s) 203
Psp1406I AACGTT 1 cut(s) 230
Psp6I CCWGG 5 cut(s) 299, 354, 646, 718, 816
PspCI CACGTG 1 cut(s) 203
PspEI GGTNACC 2 cut(s) 206, 623
PspFI CCCAGC 2 cut(s) 410, 928
PspGI CCWGG 5 cut(s) 299, 354, 646, 718, 816
PspN4I GGNNCC 5 cut(s) 75, 383, 432, 518, 885
PspPI GGNCC 4 cut(s) 6, 73, 322, 931
PstI CTGCAG 4 cut(s) 93, 352, 607, 855
PsuI RGATCY 1 cut(s) 516
PsyI GACNNNGTC 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 347
RsaI GTAC 3 cut(s) 402, 701, 868
RsaNI GTAC 3 cut(s) 401, 700, 867
RseI CAYNNNNRTG 2 cut(s) 547, 558
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 8 cut(s) 151, 177, 294, 315, 345, 348, 837, 840
Sau3AI GATC 2 cut(s) 516, 889
Sau96I GGNCC 4 cut(s) 6, 73, 322, 931
SchI GAGTC 2 cut(s) 111, 181
ScrFI CCNGG 7 cut(s) 10, 126, 301, 356, 648, 720, 818
SduI GDGCHC 2 cut(s) 421, 733
SfaNI GCATC 7 cut(s) 250, 272, 539, 550, 679, 694, 815
SfcI CTRYAG 6 cut(s) 89, 348, 603, 634, 684, 851
SinI GGWCC 2 cut(s) 6, 73
SmiMI CAYNNNNRTG 2 cut(s) 547, 558
Sse9I AATT 5 cut(s) 275, 309, 471, 498, 655
SseBI AGGCCT 2 cut(s) 95, 354
SsiI CCGC 4 cut(s) 42, 151, 156, 294
StuI AGGCCT 2 cut(s) 95, 354
StyD4I CCNGG 7 cut(s) 8, 124, 299, 354, 646, 718, 816
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 3 cut(s) 73, 109, 638
TaiI ACGT 3 cut(s) 205, 233, 452
TasI AATT 5 cut(s) 275, 309, 471, 498, 655
TatI WGTACW 2 cut(s) 400, 866
TauI GCSGC 2 cut(s) 153, 296
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TscAI CASTG 4 cut(s) 93, 112, 178, 643
TseFI GTSAC 4 cut(s) 103, 140, 206, 623
TseI GCWGC 6 cut(s) 176, 314, 344, 347, 836, 839
Tsp45I GTSAC 4 cut(s) 103, 140, 206, 623
TspDTI ATGAA 4 cut(s) 146, 152, 649, 934
TspRI CASTG 4 cut(s) 93, 112, 178, 643
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 2 cut(s) 545, 899
VpaK11BI GGWCC 2 cut(s) 6, 73
XagI CCTNNNNNAGG 1 cut(s) 359
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.