Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0004141

Physical Location & Seq

Genomic Coordinates Forward (+)

14822056 .. 14830625

Gene Structure 8570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00394380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGAAGCGCAGGGTGTTGATGCTGTGCGGGGACTACATGGAAGATCAGGAGGCCATGGTCCCTTTTCAAGCGTTGCAGGCCTTTGGAGTTGCCGTCGATGCCGTCTGTCCCGGAAAGAAAGCCGGCGACATCTGCCGCACCTCCGTTCATCAACTCTCTCCTTCTCACCAGAACCTATCCACCTTGTGGTGTGTGGATCCCAGTATATACACCCTCGTGCATGCTGGGACTGACAATACTAGAGGCAATAGCAGACGTGACGGTGTTGTTATGCCTTTAGAATCCCATTTCACCTGGATTCAGAGGACATATTCCGAATCACGTGGTCATAATTTTACACTCAATGCAACATTCGATGACGTTGAAGCTGACAATTATGATGGATTAATAATCCCAGGAGGGCGGGCTCCTGAATATCTTGCTGTTGATGCATCAGTTCTAGATTTGGTGAAAAAGTTTACAGACTCCACGAAGGCAATTGCATCAATTTGCCATGGGCAATTGGTCCTAGCAGCTGCTGGCTCGGTTAAAGGTCGGAAGTGCACAGCATATCCTACTGTGGGACCTGTACTTGTTGCTGCAGGTGCTCACTGGGTGGAACCAGAGACCATGGCTGCGTGTGTTGTTGATGGTAACATAATAACAGGGGCTACATATGAAGGCCATCCCGAGTTCATTAGGGCTTTTGTGAAGGCACTAGGAGGCAACATAACTGGTCCAGATAGAAGAGTTCTGTTTCTCTGTGGAGACTTCATGGAAGATTATGAGGTAGCAGTGCCTTTTCAGTCGCTTCAAGCTCTAGGGTGCCATGTCGATGGAGCATGCCCCAAGAAGAAAGCTGGTGATATCTGCGCAACCGCTGTCCATGATTTTGAAGGTGATCAAACCTACAGTGAGAAGCCAGGACATAATTTTACTTTAACAGCTGATTTTGAAGGTTTAGATGCCTCCAGTTATGATGCTCTTGTAATCCCTGGCGGTCGGGCTCCAGAATATTTGGCACTGGATAAGAAAGTTATTGAACTAGTGAAACAAATTATGGAAGCCAAGAAACCAGTTGCATCGATCTGCCATGGGCAACAGATTCTAGCTGCTGCTGGCGTTCTACAGGGAAGGAATTGCACTGCGTACCCTGCAGTGAAGCTTAATGTGATTTTGTCAGGAGCAACGTGGCTTGAACCCAATCCAATACATCGTTGCTTCACTGATGGGAATTTGGTGACTGGAGCGGCTTGGCCAGGCCACCCGGAGTTCATCTCTCAATTGATGGCATTGCTGGATGTTGGAGTATCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006081 GO:0006082 GO:0006089 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009438 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019172 GO:0019249 GO:0019752 GO:0032787 GO:0042180 GO:0042182 GO:0043436 GO:0044237 GO:0044248 GO:0044249 GO:0044281 GO:0044282 GO:0044283 GO:0046185 GO:0046394 GO:0051596 GO:0061727 GO:0071704 GO:0072330 GO:1901575 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00620 ko01120 map00620 map01120

Pfam Domains

Protein Families

DJ-1_PfpI

Protein Analysis

432

Amino Acids

46.43

Weight (kDa)

5.51

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DJ-1_PfpI	PF01965	101 - 231	4.2e-37	DJ-1/PfpI family
DJ-1_PfpI	PF01965	242 - 424	1.5e-46	DJ-1/PfpI family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02720
fragaria_vesca	FvH4_1g27590 FvH4_7g05680
malus_domestica	MD09G1281500.v1.1 MD09G1281600.v1.1
prunus_persica	Prupe.3G022000_v2.0.a1
pyrus_communis	pycom09g18920 pycom09g18960
rosa_chinensis	RchiOBHm_Chr3g0487821 RchiOBHm_Chr3g0487831 RchiOBHm_Chr3g0487891 RchiOBHm_Chr3g0487941 RchiOBHm_Chr3g0487981
rosa_laevigata	RLG00000022952 RLG00000022958 RLG00000022959 RLG00000022969
rosa_multiflora	Rmu_sc0004448.1_g000032
rosa_roxburghii	Rroxscaffold_3G00252270 Rroxscaffold_6G00394380 Rroxscaffold_6G00394420
rosa_rugosa	Rorug03G0237400 Rorug03G0237500 Rorug03G0237500
rosa_samantha	Rh3AG284900 Rh3AG285300 Rh3AG285600 Rh3BG321900 Rh3BG322300 Rh3CG320900 Rh3DG319100
rosa_wichuraiana	Rw0G004650 Rw3G025290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	572
Acc16I	TGCGCA	1 cut(s)	853
Acc36I	ACCTGC	1 cut(s)	572
AccB1I	GGYRCC	1 cut(s)	804
AccB7I	CCANNNNNTGG	1 cut(s)	186
AccBSI	CCGCTC	1 cut(s)	1229
AciI	CCGC	6 cut(s)	27, 136, 403, 858, 978, 1229
AclWI	GGATC	2 cut(s)	191, 204
AcoI	YGGCCR	1 cut(s)	1235
AcsI	RAATTY	1 cut(s)	1213
AcvI	CACGTG	1 cut(s)	323
AdeI	CACNNNGTG	2 cut(s)	186, 595
AfaI	GTAC	2 cut(s)	570, 1130
AfiI	CCNNNNNNNGG	2 cut(s)	186, 560
AgsI	TTSAA	7 cut(s)	68, 365, 794, 875, 935, 1022, 1178
AhlI	ACTAGT	1 cut(s)	1024
AjiI	CACGTC	1 cut(s)	257
AjnI	CCWGG	5 cut(s)	293, 394, 901, 973, 1237
AleI	CACNNNNGTG	1 cut(s)	215
AluBI	AGCT	7 cut(s)	368, 515, 797, 839, 926, 1091, 1144
AluI	AGCT	7 cut(s)	368, 515, 797, 839, 926, 1091, 1144
Alw21I	GWGCWC	2 cut(s)	545, 589
Alw26I	GTCTC	2 cut(s)	599, 741
Alw44I	GTGCAC	1 cut(s)	541
AlwI	GGATC	2 cut(s)	191, 204
AlwNI	CAGNNNCTG	1 cut(s)	518
Ama87I	CYCGRG	1 cut(s)	668
AoxI	GGCC	5 cut(s)	51, 78, 661, 1235, 1240
ApaLI	GTGCAC	1 cut(s)	541
ApeKI	GCWGC	6 cut(s)	512, 515, 578, 614, 1091, 1094
ApoI	RAATTY	1 cut(s)	1213
AseI	ATTAAT	1 cut(s)	386
AspLEI	GCGC	2 cut(s)	9, 854
AspS9I	GGNCC	4 cut(s)	58, 505, 563, 716
AsuC2I	CCSGG	2 cut(s)	111, 1247
AsuHPI	GGTGA	6 cut(s)	158, 283, 460, 854, 890, 1231
AvaI	CYCGRG	1 cut(s)	668
AvaII	GGWCC	4 cut(s)	58, 505, 563, 716
BaeGI	GKGCMC	1 cut(s)	545
BalI	TGGCCA	1 cut(s)	1237
BamHI	GGATCC	1 cut(s)	196
BanI	GGYRCC	1 cut(s)	804
BanII	GRGCYC	2 cut(s)	409, 988
BauI	CACGAG	1 cut(s)	215
BbrPI	CACGTG	1 cut(s)	323
Bbv12I	GWGCWC	2 cut(s)	545, 589
BbvI	GCAGC	6 cut(s)	502, 524, 565, 601, 1078, 1081
BccI	CCATC	6 cut(s)	374, 623, 672, 809, 1202, 1261
BceAI	ACGGC	2 cut(s)	77, 86
BciT130I	CCWGG	5 cut(s)	295, 396, 903, 975, 1239
BclI	TGATCA	1 cut(s)	880
BcnI	CCSGG	2 cut(s)	111, 1247
BcoDI	GTCTC	2 cut(s)	599, 741
BcuI	ACTAGT	1 cut(s)	1024
BfaI	CTAG	7 cut(s)	240, 440, 509, 698, 800, 1025, 1088
BfmI	CTRYAG	4 cut(s)	579, 889, 1106, 1134
BfuAI	ACCTGC	1 cut(s)	572
BisI	GCNGC	8 cut(s)	136, 513, 516, 579, 615, 1092, 1095, 1230
BlsI	GCNGC	8 cut(s)	137, 514, 517, 580, 616, 1093, 1096, 1231
Bme1390I	CCNGG	7 cut(s)	111, 295, 396, 903, 975, 1239, 1247
Bme18I	GGWCC	4 cut(s)	58, 505, 563, 716
BmeT110I	CYCGRG	1 cut(s)	668
BmgBI	CACGTC	1 cut(s)	257
BmgT120I	GGNCC	4 cut(s)	58, 505, 563, 716
BmiI	GGNNCC	7 cut(s)	60, 198, 408, 564, 600, 806, 987
BmrFI	CCNGG	7 cut(s)	111, 295, 396, 903, 975, 1239, 1247
BmrI	ACTGGG	2 cut(s)	195, 601
BmsI	GCATC	8 cut(s)	9, 88, 418, 440, 491, 934, 949, 1070
BmuI	ACTGGG	2 cut(s)	195, 601
BplI	GAGNNNNNCTC	2 cut(s)	1241, 1273
BpmI	CTGGAG	3 cut(s)	934, 972, 1245
BpuMI	CCSGG	2 cut(s)	111, 1247
Bsa29I	ATCGAT	1 cut(s)	1064
BsaAI	YACGTR	1 cut(s)	323
BsaI	GGTCTC	1 cut(s)	599
BsaJI	CCNNGG	6 cut(s)	54, 394, 493, 609, 973, 1072
BsaXI	ACNNNNNCTCC	2 cut(s)	78, 108
Bsc4I	CCNNNNNNNGG	2 cut(s)	186, 560
Bse118I	RCCGGY	1 cut(s)	122
Bse1I	ACTGG	7 cut(s)	201, 596, 718, 951, 1008, 1055, 1228
Bse3DI	GCAATG	1 cut(s)	1271
BseBI	CCWGG	5 cut(s)	295, 396, 903, 975, 1239
BseCI	ATCGAT	1 cut(s)	1064
BseDI	CCNNGG	6 cut(s)	54, 394, 493, 609, 973, 1072
BseGI	GGATG	2 cut(s)	664, 1285
BseLI	CCNNNNNNNGG	2 cut(s)	186, 560
BseMI	GCAATG	1 cut(s)	1271
BseNI	ACTGG	7 cut(s)	201, 596, 718, 951, 1008, 1055, 1228
BseSI	GKGCMC	1 cut(s)	545
BseXI	GCAGC	6 cut(s)	502, 524, 565, 601, 1078, 1081
BseYI	CCCAGC	1 cut(s)	224
Bsh1285I	CGRYCG	1 cut(s)	982
BshFI	GGCC	5 cut(s)	53, 80, 663, 1237, 1242
BshNI	GGYRCC	1 cut(s)	804
BshVI	ATCGAT	1 cut(s)	1064
BsiEI	CGRYCG	1 cut(s)	982
BsiHKAI	GWGCWC	2 cut(s)	545, 589
BsiHKCI	CYCGRG	1 cut(s)	668
BsiSI	CCGG	3 cut(s)	111, 123, 1247
BslFI	GGGAC	5 cut(s)	44, 44, 93, 241, 576
BslI	CCNNNNNNNGG	2 cut(s)	186, 560
BsmAI	GTCTC	2 cut(s)	599, 741
BsmFI	GGGAC	5 cut(s)	44, 44, 93, 241, 576
BsnI	GGCC	5 cut(s)	53, 80, 663, 1237, 1242
Bso31I	GGTCTC	1 cut(s)	599
BsoBI	CYCGRG	1 cut(s)	668
Bsp1286I	GDGCHC	4 cut(s)	409, 545, 589, 988
Bsp143I	GATC	4 cut(s)	43, 196, 880, 1065
Bsp19I	CCATGG	4 cut(s)	54, 493, 609, 1072
BspACI	CCGC	6 cut(s)	27, 136, 403, 858, 978, 1229
BspANI	GGCC	5 cut(s)	53, 80, 663, 1237, 1242
BspDI	ATCGAT	1 cut(s)	1064
BspLI	GGNNCC	7 cut(s)	60, 198, 408, 564, 600, 806, 987
BspMAI	CTGCAG	2 cut(s)	583, 1138
BspMI	ACCTGC	1 cut(s)	572
BspPI	GGATC	2 cut(s)	191, 204
BspT107I	GGYRCC	1 cut(s)	804
BspTNI	GGTCTC	1 cut(s)	599
BsrBI	CCGCTC	1 cut(s)	1229
BsrDI	GCAATG	1 cut(s)	1271
BsrFI	RCCGGY	1 cut(s)	122
BsrI	ACTGG	7 cut(s)	201, 596, 718, 951, 1008, 1055, 1228
BssAI	RCCGGY	1 cut(s)	122
BssECI	CCNNGG	6 cut(s)	54, 394, 493, 609, 973, 1072
BssMI	GATC	4 cut(s)	43, 196, 880, 1065
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	4 cut(s)	54, 493, 609, 1072
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	5 cut(s)	295, 396, 903, 975, 1239
Bst4CI	ACNGT	3 cut(s)	263, 559, 893
Bst6I	CTCTTC	1 cut(s)	721
BstBAI	YACGTR	1 cut(s)	323
BstC8I	GCNNGC	7 cut(s)	78, 124, 222, 405, 520, 823, 1099
BstDSI	CCRYGG	4 cut(s)	54, 493, 609, 1072
BstF5I	GGATG	2 cut(s)	664, 1285
BstHHI	GCGC	2 cut(s)	9, 854
BstKTI	GATC	4 cut(s)	46, 199, 883, 1068
BstMAI	GTCTC	2 cut(s)	599, 741
BstMBI	GATC	4 cut(s)	43, 196, 880, 1065
BstMCI	CGRYCG	1 cut(s)	982
BstMWI	GCNNNNNNNGC	6 cut(s)	77, 98, 132, 428, 584, 1133
BstNI	CCWGG	5 cut(s)	295, 396, 903, 975, 1239
BstNSI	RCATGY	2 cut(s)	224, 825
BstSCI	CCNGG	7 cut(s)	109, 293, 394, 901, 973, 1237, 1245
BstSFI	CTRYAG	4 cut(s)	579, 889, 1106, 1134
BstSLI	GKGCMC	1 cut(s)	545
BstV1I	GCAGC	6 cut(s)	502, 524, 565, 601, 1078, 1081
BstX2I	RGATCY	1 cut(s)	196
BstXI	CCANNNNNNTGG	1 cut(s)	815
BstYI	RGATCY	1 cut(s)	196
Bsu15I	ATCGAT	1 cut(s)	1064
BsuRI	GGCC	5 cut(s)	53, 80, 663, 1237, 1242
BsuTUI	ATCGAT	1 cut(s)	1064
BtgI	CCRYGG	4 cut(s)	54, 493, 609, 1072
BtrI	CACGTC	1 cut(s)	257
BtsCI	GGATG	2 cut(s)	664, 1285
BtsI	GCAGTG	3 cut(s)	780, 1122, 1143
BtsIMutI	CAGTG	7 cut(s)	589, 780, 898, 1001, 1122, 1143, 1203
BveI	ACCTGC	1 cut(s)	572
Cac8I	GCNNGC	7 cut(s)	78, 124, 222, 405, 520, 823, 1099
CaiI	CAGNNNCTG	1 cut(s)	518
CfoI	GCGC	2 cut(s)	9, 854
Cfr10I	RCCGGY	1 cut(s)	122
Cfr13I	GGNCC	4 cut(s)	58, 505, 563, 716
ClaI	ATCGAT	1 cut(s)	1064
Csp6I	GTAC	2 cut(s)	569, 1129
CviQI	GTAC	2 cut(s)	569, 1129
DpnI	GATC	4 cut(s)	45, 198, 882, 1067
DpnII	GATC	4 cut(s)	43, 196, 880, 1065
DraIII	CACNNNGTG	2 cut(s)	186, 595
EaeI	YGGCCR	1 cut(s)	1235
Eam1104I	CTCTTC	1 cut(s)	721
EarI	CTCTTC	1 cut(s)	721
Eco130I	CCWWGG	4 cut(s)	54, 493, 609, 1072
Eco147I	AGGCCT	1 cut(s)	80
Eco24I	GRGCYC	2 cut(s)	409, 988
Eco31I	GGTCTC	1 cut(s)	599
Eco32I	GATATC	1 cut(s)	847
Eco47I	GGWCC	4 cut(s)	58, 505, 563, 716
Eco72I	CACGTG	1 cut(s)	323
Eco88I	CYCGRG	1 cut(s)	668
EcoO109I	RGGNCCY	1 cut(s)	563
EcoRII	CCWGG	5 cut(s)	293, 394, 901, 973, 1237
EcoRV	GATATC	1 cut(s)	847
EcoT14I	CCWWGG	4 cut(s)	54, 493, 609, 1072
EcoT22I	ATGCAT	1 cut(s)	433
EcoT38I	GRGCYC	2 cut(s)	409, 988
ErhI	CCWWGG	4 cut(s)	54, 493, 609, 1072
FaqI	GGGAC	5 cut(s)	44, 44, 93, 241, 576
FauI	CCCGC	2 cut(s)	20, 396
FauNDI	CATATG	1 cut(s)	655
FbaI	TGATCA	1 cut(s)	880
Fnu4HI	GCNGC	8 cut(s)	136, 513, 516, 579, 615, 1092, 1095, 1230
FokI	GGATG	2 cut(s)	651, 1292
FriOI	GRGCYC	2 cut(s)	409, 988
Fsp4HI	GCNGC	8 cut(s)	136, 513, 516, 579, 615, 1092, 1095, 1230
FspBI	CTAG	7 cut(s)	240, 440, 509, 698, 800, 1025, 1088
FspI	TGCGCA	1 cut(s)	853
GlaI	GCGC	2 cut(s)	8, 853
GluI	GCNGC	8 cut(s)	136, 513, 516, 579, 615, 1092, 1095, 1230
GsaI	CCCAGC	1 cut(s)	228
GsuI	CTGGAG	3 cut(s)	934, 972, 1245
HaeIII	GGCC	5 cut(s)	53, 80, 663, 1237, 1242
HapII	CCGG	3 cut(s)	111, 123, 1247
HhaI	GCGC	2 cut(s)	9, 854
Hin6I	GCGC	2 cut(s)	7, 852
HinP1I	GCGC	2 cut(s)	7, 852
HindIII	AAGCTT	1 cut(s)	1142
HinfI	GANTC	5 cut(s)	281, 298, 317, 464, 1084
HpaII	CCGG	3 cut(s)	111, 123, 1247
HphI	GGTGA	6 cut(s)	158, 283, 460, 854, 890, 1231
Hpy166II	GTNNAC	2 cut(s)	459, 543
Hpy188I	TCNGA	3 cut(s)	303, 316, 537
Hpy188III	TCNNGA	7 cut(s)	47, 410, 440, 668, 719, 989, 1161
Hpy8I	GTNNAC	2 cut(s)	459, 543
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	7 cut(s)	171, 466, 653, 685, 869, 929, 1107
HpyCH4III	ACNGT	3 cut(s)	263, 559, 893
HpyCH4IV	ACGT	4 cut(s)	256, 322, 360, 1169
HpyF10VI	GCNNNNNNNGC	6 cut(s)	77, 98, 132, 428, 584, 1133
HpySE526I	ACGT	4 cut(s)	256, 322, 360, 1169
HspAI	GCGC	2 cut(s)	7, 852
KroI	GCCGGC	1 cut(s)	122
KroNI	GCCGGC	1 cut(s)	124
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	4 cut(s)	43, 196, 880, 1065
LmnI	GCTCC	5 cut(s)	412, 818, 991, 1163, 1226
Lsp1109I	GCAGC	6 cut(s)	502, 524, 565, 601, 1078, 1081
LweI	GCATC	8 cut(s)	9, 88, 418, 440, 491, 934, 949, 1070
MaeI	CTAG	7 cut(s)	240, 440, 509, 698, 800, 1025, 1088
MaeII	ACGT	4 cut(s)	256, 322, 360, 1169
MaeIII	GTNAC	3 cut(s)	257, 632, 1219
MalI	GATC	4 cut(s)	45, 198, 882, 1067
MbiI	CCGCTC	1 cut(s)	1229
MboI	GATC	4 cut(s)	43, 196, 880, 1065
MboII	GAAGA	4 cut(s)	53, 738, 770, 844
MfeI	CAATTG	3 cut(s)	477, 500, 1262
MflI	RGATCY	1 cut(s)	196
MhlI	GDGCHC	4 cut(s)	409, 545, 589, 988
MlsI	TGGCCA	1 cut(s)	1237
MluNI	TGGCCA	1 cut(s)	1237
MlyI	GAGTC	1 cut(s)	458
MmeI	TCCRAC	2 cut(s)	515, 1264
MnlI	CCTC	9 cut(s)	43, 151, 224, 236, 297, 392, 695, 760, 958
Mox20I	TGGCCA	1 cut(s)	1237
Mph1103I	ATGCAT	1 cut(s)	433
MroNI	GCCGGC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	1237
MseI	TTAA	4 cut(s)	386, 528, 920, 1146
MslI	CAYNNNNRTG	2 cut(s)	215, 813
Msp20I	TGGCCA	1 cut(s)	1237
MspA1I	CMGCKG	3 cut(s)	515, 860, 926
MspI	CCGG	3 cut(s)	111, 123, 1247
MspR9I	CCNGG	7 cut(s)	111, 295, 396, 903, 975, 1239, 1247
MunI	CAATTG	3 cut(s)	477, 500, 1262
MvaI	CCWGG	5 cut(s)	295, 396, 903, 975, 1239
MwoI	GCNNNNNNNGC	6 cut(s)	77, 98, 132, 428, 584, 1133
NaeI	GCCGGC	1 cut(s)	124
NciI	CCSGG	2 cut(s)	111, 1247
NcoI	CCATGG	4 cut(s)	54, 493, 609, 1072
NdeI	CATATG	1 cut(s)	655
NdeII	GATC	4 cut(s)	43, 196, 880, 1065
NgoMIV	GCCGGC	1 cut(s)	122
NlaIV	GGNNCC	7 cut(s)	60, 198, 408, 564, 600, 806, 987
NmuCI	GTSAC	2 cut(s)	257, 1219
NsbI	TGCGCA	1 cut(s)	853
NsiI	ATGCAT	1 cut(s)	433
NspI	RCATGY	2 cut(s)	224, 825
OliI	CACNNNNGTG	1 cut(s)	215
PaeI	GCATGC	2 cut(s)	224, 825
PaqCI	CACCTGC	1 cut(s)	572
PceI	AGGCCT	1 cut(s)	80
PdiI	GCCGGC	1 cut(s)	124
PfeI	GAWTC	4 cut(s)	281, 298, 317, 1084
PflMI	CCANNNNNTGG	1 cut(s)	186
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	8 cut(s)	137, 514, 517, 580, 616, 1093, 1096, 1231
PleI	GAGTC	1 cut(s)	458
PmaCI	CACGTG	1 cut(s)	323
PmlI	CACGTG	1 cut(s)	323
PpsI	GAGTC	1 cut(s)	458
Ppu21I	YACGTR	1 cut(s)	323
PpuMI	RGGWCCY	1 cut(s)	563
PshBI	ATTAAT	1 cut(s)	386
Psp5II	RGGWCCY	1 cut(s)	563
Psp6I	CCWGG	5 cut(s)	293, 394, 901, 973, 1237
PspCI	CACGTG	1 cut(s)	323
PspFI	CCCAGC	1 cut(s)	224
PspGI	CCWGG	5 cut(s)	293, 394, 901, 973, 1237
PspN4I	GGNNCC	7 cut(s)	60, 198, 408, 564, 600, 806, 987
PspPI	GGNCC	4 cut(s)	58, 505, 563, 716
PspPPI	RGGWCCY	1 cut(s)	563
PstI	CTGCAG	2 cut(s)	583, 1138
PstNI	CAGNNNCTG	1 cut(s)	518
PsuI	RGATCY	1 cut(s)	196
PvuII	CAGCTG	2 cut(s)	515, 926
RsaI	GTAC	2 cut(s)	570, 1130
RsaNI	GTAC	2 cut(s)	569, 1129
RseI	CAYNNNNRTG	2 cut(s)	215, 813
SaqAI	TTAA	4 cut(s)	386, 528, 920, 1146
SatI	GCNGC	8 cut(s)	136, 513, 516, 579, 615, 1092, 1095, 1230
Sau3AI	GATC	4 cut(s)	43, 196, 880, 1065
Sau96I	GGNCC	4 cut(s)	58, 505, 563, 716
SchI	GAGTC	1 cut(s)	458
ScrFI	CCNGG	7 cut(s)	111, 295, 396, 903, 975, 1239, 1247
SduI	GDGCHC	4 cut(s)	409, 545, 589, 988
SfaNI	GCATC	8 cut(s)	9, 88, 418, 440, 491, 934, 949, 1070
SfcI	CTRYAG	4 cut(s)	579, 889, 1106, 1134
SinI	GGWCC	4 cut(s)	58, 505, 563, 716
SmiMI	CAYNNNNRTG	2 cut(s)	215, 813
SpeI	ACTAGT	1 cut(s)	1024
SphI	GCATGC	2 cut(s)	224, 825
SseBI	AGGCCT	1 cut(s)	80
SsiI	CCGC	6 cut(s)	27, 136, 403, 858, 978, 1229
SspI	AATATT	1 cut(s)	995
SspMI	CTAG	7 cut(s)	240, 440, 509, 698, 800, 1025, 1088
StuI	AGGCCT	1 cut(s)	80
StyD4I	CCNGG	7 cut(s)	109, 293, 394, 901, 973, 1237, 1245
StyI	CCWWGG	4 cut(s)	54, 493, 609, 1072
TaaI	ACNGT	3 cut(s)	263, 559, 893
TaiI	ACGT	4 cut(s)	259, 325, 363, 1172
TaqI	TCGA	4 cut(s)	96, 354, 813, 1064
TatI	WGTACW	1 cut(s)	568
TauI	GCSGC	2 cut(s)	138, 1232
TfiI	GAWTC	4 cut(s)	281, 298, 317, 1084
Tru1I	TTAA	4 cut(s)	386, 528, 920, 1146
Tru9I	TTAA	4 cut(s)	386, 528, 920, 1146
TscAI	CASTG	7 cut(s)	596, 780, 898, 1008, 1129, 1143, 1210
TseFI	GTSAC	2 cut(s)	257, 1219
TseI	GCWGC	6 cut(s)	512, 515, 578, 614, 1091, 1094
Tsp45I	GTSAC	2 cut(s)	257, 1219
TspDTI	ATGAA	6 cut(s)	17, 137, 664, 672, 742, 1243
TspGWI	ACGGA	1 cut(s)	133
TspRI	CASTG	7 cut(s)	596, 780, 898, 1008, 1129, 1143, 1210
Van91I	CCANNNNNTGG	1 cut(s)	186
VneI	GTGCAC	1 cut(s)	541
VpaK11BI	GGWCC	4 cut(s)	58, 505, 563, 716
VspI	ATTAAT	1 cut(s)	386
XapI	RAATTY	1 cut(s)	1213
XbaI	TCTAGA	1 cut(s)	439
XceI	RCATGY	2 cut(s)	224, 825
XspI	CTAG	7 cut(s)	240, 440, 509, 698, 800, 1025, 1088
Zsp2I	ATGCAT	1 cut(s)	433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.