Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006417

Physical Location & Seq

Genomic Coordinates Reverse (-)

13544599 .. 13550069

Gene Structure 5471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027650

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGAGAAAATTGAGGTCAGTATCATTTCCAGAGACACAATCAAACCATCAGCTGCTTCCTCTTCACTACTTCACCCTCACAAGCTTTCCATCATCGATCAAATCACTCCCACAATGTATGTCCCGGTTATATTCTTCTACCCCATTACTGACCCCGTCTTCAATCTTCCTCGAACCTTAACCGACTTAAAAAACACCCTTTCCCAGACTCTCACTTTGTACTATCCACTATCCGGAAGGGTCAAAAACAACTTATACATTGATGATTTTGAAGCGGGTGTCCCCTACCTTGAGGTCAGAGTAAATTGTAACATGATTGATTTTCTAAAGCTTCCAAAAACCGAGTGGCTAAATGAGTTTGTTCCAATCCAACCATATCGCAAGGAGACAATATCTGAGCTTCTCCCCTTGCTTGGAGTTCAAGTCAACATCTTCGACTATGGAATAGCAATTGGTGTCTCCCTTTGTCACAAGCTCATCGATGGCGAAACAGCAAACTGTTTTCTCAAGTCCTGGGTTGCTGCTTTTCGTGGGTGTCGTGACAAAATCATTCATCCGAATCTCTCTCAAGCAGCAGAACTTTTCCCACCGAGAGATGACTTGCCTGAAAAGTATGTAGCTCTGATGGAAAGGTGGTGCTTTTGCGAAAGAAATGTTGTTACAAGGAGATTTGTATTTGATGCGAAGGCCATATCTGCACTTCAAGATGAAGGGAAGAGCGAGTACGTGCCCGAGCCATCACGTGTTCAGGCCCTCACTGGTTTTCTCTGGAAACATCAACTAGCTGCTTCTCGGGCATTATCATCAGGTACTTCAACAAGATTTTCTTTAGCAATCCAAGCGGTGAACTTAAGGTCACGAATGAACAAGAAAACGACGTTGGACAATGCCATTGGAAATATCTTTTTGTGGGCTCCGTCATTCCTAGAGCTAAATTATACAACACCAGAGAGTAGTGATCATAAGTTGTGTGACTTGGTTAACTTGCTCAAAGAATCTGTCAAAGAATATAACAGTGATTACTTGGAGACTTTAAAGGGTGAAAAGGGATACGGAGGCATGTGTGATTGGCTAGATTTGATGGAAGAGGGAAGTTCTATAGAACCAGCACTAGAGATTTATTCATTCTCGAGCTGGACTAGAATGTTTGACCAAGTTGATTTTGGATGGGGGAAGCCATTTTGGATTGGAGTCACGGGGAAAGTTCAAACTACATATACCAATTCCACAGTATTAGTTGAAACACAATGCGATCACGGAATTGAAGCGTGGGTGACTCTAGATCAAAAGCGAATGGCTATGCTGGAACAAGATCCCCAGTTTTTAGCATTTACATCTCCAACCCCCGGGATTTCAATGGCCTCTTCACTGACTCCCGCAACTTATATGCCACTAATCTTGTTCTATCCCATTAGTGACCCCAAGTCATCGTTCAATCTCCTCGAAACCCTAACCCGGTTAAAAAGCTCCCTCTCCGAGACTCTCACTCTCTACTACCTATTTTCAGGACGGGCTAAAAACAACCTCTACATTCATGACTTTGACACCGGTATTCCCTTCCTTGAAGCCCGAGTCAATTGTCGCATGCTCGATTTTCTTAAGCTCCAAGAAACCGAGTTACTGAACCGTTTTGTTCCATTCCATCCCATTTGCAAGGAAACTGGTGATGAGTCTCTGCTCCCGATGATAGCTTTTCAAGTGAATGTCTTTGCTTGTGGTGGAATAGCAATTGGGGGATCCGCTTCTCATAAGCTGTGTGATGGGTTGGCCGTGAACTCTATCCTTGAGTCTTGGGCTGCTATTTTTCGTGAGGAGCTTGACAAAATAATATACCCTAATTTCTCCCAAGCCTCATCTGTCTTTCCACCAAGAGCTCTGTTGCCTAAAAAGTATCTAGATTTAGTAGATAGCTTTTGGTTCAAGGAAAACAATTATGTTACAAGGAGATTTGTGTTTAGTGTCAAAGCCATAGCCACCCAACGAGAAAAATCGAAGAGCAAATGCGTGCCCAAGCCATCAAGTAATGAGGCACTCACATGTTTTATTTGGAAACATGCAATGGCTTCTTCTCGGGCACTATCACCAGGTACTTCACCAAGAACTTCCATAATAGCGCAAGCAATGAACATGAGATCACGGGTGAAGCCGCAAACGTCGTCAAGTACTAATATCATTGGAAATTTCTTTTGGTGGGCGACAACAGTCGCGGACTCATCTAAGCTAGGAGAAGATCATGAGTTATGTGATTTGGAGCACCAGATTAATGAATCTCTCAAAGGATTCGATAGGGGTTATTTTGAGTCTCATCAGGGAGAAGAGGGATTTGGAGCCATTTCAAACTACTTTAATCAACTAAACTACTTTAATCAACTAGAAGTCTTGCTTTCTACAAAATCCCCACCAGAAGTTTATTTATTCATCAATTGGACAAGCATATTTCACAAATTGGATTTTGGATGGGGGAATCCTTTCTGGGTAGGACTCATGGGGAAAGTCGGGCCTGAGTTTAGGAATTTCACTGTGTTCATGGAAGCACAATGTGGTAAAGGAATTGAAGCGTGGGTGACCTTGGAGGCAAAGCAAATGGCTCTGCTCGAAAAAGACCTTACGTTTCTAGCAGTTGCTTCTCCAAATTCTGGGATTTCAAGCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006807 GO:0008150 GO:0008152 GO:0009820 GO:0016740 GO:0016746 GO:0016747 GO:0050636 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

885

Amino Acids

99.93

Weight (kDa)

5.87

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	5 - 441	7.2e-59	Transferase family
Transferase	PF02458	456 - 869	4e-55	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006417)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g40060 FvH4_7g18570 FvH4_7g18570 FvH4_7g18570 FvH4_7g18640
rosa_chinensis	RchiOBHm_Chr1g0362351 RchiOBHm_Chr2g0101451 RchiOBHm_Chr2g0101491
rosa_laevigata	RLG00000017082 RLG00000027650
rosa_multiflora	Rmu_co8521771.1_g000002 Rmu_sc0006153.1_g000027 Rmu_sc0006153.1_g000054
rosa_roxburghii	Rroxscaffold_2G00141300 Rroxscaffold_4G00294230
rosa_rugosa	Rorug01G0297800 Rorug02G0098200
rosa_samantha	Rh1AG306500 Rh1BG270000 Rh1CG287500 Rh1DG300200 Rh2AG147100 Rh2CG153000 Rh2CG153300 Rh2DG152500
rosa_wichuraiana	Rw1G027210 Rw2G011470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2636
AccII	CGCG	1 cut(s)	2207
AccIII	TCCGGA	1 cut(s)	233
AciI	CCGC	6 cut(s)	275, 842, 1377, 1740, 2147, 2207
AclWI	GGATC	3 cut(s)	1307, 1731, 1744
AcoI	YGGCCR	1 cut(s)	1767
AcsI	RAATTY	3 cut(s)	2179, 2512, 2632
AcvI	CACGTG	1 cut(s)	743
AdeI	CACNNNGTG	1 cut(s)	2540
AfaI	GTAC	5 cut(s)	221, 725, 811, 2089, 2164
AfiI	CCNNNNNNNGG	5 cut(s)	233, 413, 1346, 1455, 2636
AflII	CTTAAG	2 cut(s)	850, 1598
AflIII	ACRYGT	2 cut(s)	742, 2036
AgeI	ACCGGT	1 cut(s)	1547
AhdI	GACNNNNNGTC	1 cut(s)	1423
AjnI	CCWGG	2 cut(s)	512, 2083
AjuI	GAANNNNNNNTTGG	8 cut(s)	863, 895, 1415, 1447, 2170, 2202, 2307, 2339
Alw21I	GWGCWC	2 cut(s)	1876, 2256
Alw26I	GTCTC	7 cut(s)	27, 380, 463, 1022, 1472, 1677, 2307
AlwI	GGATC	3 cut(s)	1307, 1731, 1744
Ama87I	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
Aor13HI	TCCGGA	1 cut(s)	233
AoxI	GGCC	5 cut(s)	687, 750, 1359, 1767, 2498
ApeKI	GCWGC	5 cut(s)	53, 521, 572, 785, 1796
ApoI	RAATTY	3 cut(s)	2179, 2512, 2632
ArsI	GACNNNNNNTTYG	4 cut(s)	199, 231, 984, 1016
AseI	ATTAAT	1 cut(s)	2262
AsiGI	ACCGGT	1 cut(s)	1547
Asp700I	GAANNNNTTC	1 cut(s)	2468
AspLEI	GCGC	1 cut(s)	2116
AspS9I	GGNCC	2 cut(s)	751, 2498
AsuC2I	CCSGG	4 cut(s)	125, 1347, 1348, 1456
AsuHPI	GGTGA	9 cut(s)	65, 856, 1052, 1285, 1676, 2073, 2085, 2152, 2575
AvaI	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
BaeGI	GKGCMC	3 cut(s)	732, 2010, 2077
BamHI	GGATCC	1 cut(s)	1736
BanII	GRGCYC	2 cut(s)	916, 1876
BarI	GAAGNNNNNNTAC	2 cut(s)	707, 739
BbrPI	CACGTG	1 cut(s)	743
BbsI	GAAGAC	1 cut(s)	151
Bbv12I	GWGCWC	2 cut(s)	1876, 2256
BbvI	GCAGC	5 cut(s)	40, 508, 584, 772, 1783
BceAI	ACGGC	1 cut(s)	1754
BciT130I	CCWGG	2 cut(s)	514, 2085
BciVI	GTATCC	1 cut(s)	1043
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	4 cut(s)	125, 1347, 1348, 1456
BcoDI	GTCTC	7 cut(s)	27, 380, 463, 1022, 1472, 1677, 2307
BfmI	CTRYAG	1 cut(s)	1098
BfrI	CTTAAG	2 cut(s)	850, 1598
BfuI	GTATCC	1 cut(s)	1043
BisI	GCNGC	6 cut(s)	54, 522, 573, 786, 1797, 2147
BlsI	GCNGC	6 cut(s)	55, 523, 574, 787, 1798, 2148
BmcAI	AGTACT	1 cut(s)	2164
Bme1390I	CCNGG	6 cut(s)	125, 514, 1347, 1348, 1456, 2085
BmeRI	GACNNNNNGTC	1 cut(s)	1423
BmeT110I	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
BmgT120I	GGNCC	2 cut(s)	751, 2498
BmiI	GGNNCC	3 cut(s)	915, 1738, 2329
BmrFI	CCNGG	6 cut(s)	125, 514, 1347, 1348, 1456, 2085
BmrI	ACTGGG	1 cut(s)	1312
BmsI	GCATC	1 cut(s)	670
BmuI	ACTGGG	1 cut(s)	1312
BoxI	GACNNNNGTC	1 cut(s)	2201
BpiI	GAAGAC	1 cut(s)	151
BpuEI	CTTGAG	4 cut(s)	311, 491, 552, 1805
BpuMI	CCSGG	4 cut(s)	125, 1347, 1348, 1456
Bsa29I	ATCGAT	2 cut(s)	96, 480
BsaAI	YACGTR	2 cut(s)	727, 743
BsaJI	CCNNGG	4 cut(s)	513, 1345, 1346, 2568
BsaWI	WCCGGW	2 cut(s)	233, 1547
BsaXI	ACNNNNNCTCC	2 cut(s)	408, 438
Bsc4I	CCNNNNNNNGG	5 cut(s)	233, 413, 1346, 1455, 2636
Bse118I	RCCGGY	1 cut(s)	1547
Bse1I	ACTGG	3 cut(s)	763, 1318, 1666
Bse3DI	GCAATG	2 cut(s)	2064, 2127
BseAI	TCCGGA	1 cut(s)	233
BseBI	CCWGG	2 cut(s)	514, 2085
BseCI	ATCGAT	2 cut(s)	96, 480
BseDI	CCNNGG	4 cut(s)	513, 1345, 1346, 2568
BseGI	GGATG	4 cut(s)	553, 1172, 1642, 2462
BseLI	CCNNNNNNNGG	5 cut(s)	233, 413, 1346, 1455, 2636
BseMI	GCAATG	2 cut(s)	2064, 2127
BseMII	CTCAG	2 cut(s)	387, 2493
BseNI	ACTGG	3 cut(s)	763, 1318, 1666
BseRI	GAGGAG	2 cut(s)	1430, 1826
BseSI	GKGCMC	3 cut(s)	732, 2010, 2077
BseXI	GCAGC	5 cut(s)	40, 508, 584, 772, 1783
BsgI	GTGCAG	1 cut(s)	681
Bsh1236I	CGCG	1 cut(s)	2207
BshFI	GGCC	5 cut(s)	689, 752, 1361, 1769, 2500
BshTI	ACCGGT	1 cut(s)	1547
BshVI	ATCGAT	2 cut(s)	96, 480
BsiHKAI	GWGCWC	2 cut(s)	1876, 2256
BsiHKCI	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
BsiSI	CCGG	5 cut(s)	125, 234, 1347, 1456, 1548
BslFI	GGGAC	2 cut(s)	107, 266
BslI	CCNNNNNNNGG	5 cut(s)	233, 413, 1346, 1455, 2636
BsmAI	GTCTC	7 cut(s)	27, 380, 463, 1022, 1472, 1677, 2307
BsmFI	GGGAC	2 cut(s)	107, 266
BsnI	GGCC	5 cut(s)	689, 752, 1361, 1769, 2500
BsoBI	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
Bsp1286I	GDGCHC	6 cut(s)	732, 916, 1876, 2010, 2077, 2256
Bsp13I	TCCGGA	1 cut(s)	233
Bsp143I	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
BspACI	CCGC	6 cut(s)	275, 842, 1377, 1740, 2147, 2207
BspANI	GGCC	5 cut(s)	689, 752, 1361, 1769, 2500
BspCNI	CTCAG	2 cut(s)	388, 2494
BspDI	ATCGAT	2 cut(s)	96, 480
BspEI	TCCGGA	1 cut(s)	233
BspFNI	CGCG	1 cut(s)	2207
BspHI	TCATGA	2 cut(s)	1534, 2233
BspLI	GGNNCC	3 cut(s)	915, 1738, 2329
BspPI	GGATC	3 cut(s)	1307, 1731, 1744
BspQI	GCTCTTC	2 cut(s)	710, 1988
BspTI	CTTAAG	2 cut(s)	850, 1598
BsrDI	GCAATG	2 cut(s)	2064, 2127
BsrFI	RCCGGY	1 cut(s)	1547
BsrI	ACTGG	3 cut(s)	763, 1318, 1666
BssAI	RCCGGY	1 cut(s)	1547
BssECI	CCNNGG	4 cut(s)	513, 1345, 1346, 2568
BssMI	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
BssT1I	CCWWGG	1 cut(s)	2568
Bst2UI	CCWGG	2 cut(s)	514, 2085
Bst4CI	ACNGT	6 cut(s)	500, 1016, 1231, 1628, 2203, 2521
Bst6I	CTCTTC	6 cut(s)	67, 710, 1080, 1369, 1988, 2310
BstAFI	CTTAAG	2 cut(s)	850, 1598
BstBAI	YACGTR	2 cut(s)	727, 743
BstC8I	GCNNGC	3 cut(s)	1586, 2006, 2118
BstDEI	CTNAG	3 cut(s)	396, 2217, 2502
BstEII	GGTNACC	1 cut(s)	2563
BstF5I	GGATG	4 cut(s)	553, 1172, 1642, 2462
BstFNI	CGCG	1 cut(s)	2207
BstHHI	GCGC	1 cut(s)	2116
BstKTI	GATC	8 cut(s)	100, 961, 1255, 1285, 1315, 1739, 2135, 2233
BstMAI	GTCTC	7 cut(s)	27, 380, 463, 1022, 1472, 1677, 2307
BstMBI	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
BstMWI	GCNNNNNNNGC	3 cut(s)	695, 794, 839
BstNI	CCWGG	2 cut(s)	514, 2085
BstNSI	RCATGY	5 cut(s)	1063, 1588, 2040, 2057, 2653
BstPAI	GACNNNNGTC	1 cut(s)	2201
BstPI	GGTNACC	1 cut(s)	2563
BstSCI	CCNGG	6 cut(s)	123, 512, 1345, 1346, 1454, 2083
BstSFI	CTRYAG	1 cut(s)	1098
BstSLI	GKGCMC	3 cut(s)	732, 2010, 2077
BstUI	CGCG	1 cut(s)	2207
BstV1I	GCAGC	5 cut(s)	40, 508, 584, 772, 1783
BstV2I	GAAGAC	1 cut(s)	151
BstX2I	RGATCY	2 cut(s)	1312, 1736
BstYI	RGATCY	2 cut(s)	1312, 1736
Bsu15I	ATCGAT	2 cut(s)	96, 480
BsuI	GTATCC	1 cut(s)	1043
BsuRI	GGCC	5 cut(s)	689, 752, 1361, 1769, 2500
BsuTUI	ATCGAT	2 cut(s)	96, 480
BtsCI	GGATG	4 cut(s)	553, 1172, 1642, 2462
BtsIMutI	CAGTG	4 cut(s)	756, 1021, 1367, 2517
Cac8I	GCNNGC	3 cut(s)	1586, 2006, 2118
CciI	TCATGA	2 cut(s)	1534, 2233
CfoI	GCGC	1 cut(s)	2116
Cfr10I	RCCGGY	1 cut(s)	1547
Cfr13I	GGNCC	2 cut(s)	751, 2498
Cfr9I	CCCGGG	1 cut(s)	1346
ClaI	ATCGAT	2 cut(s)	96, 480
CsiI	ACCWGGT	1 cut(s)	2083
Csp6I	GTAC	5 cut(s)	220, 724, 810, 2088, 2163
CspAI	ACCGGT	1 cut(s)	1547
CspCI	CAANNNNNGTGG	2 cut(s)	1380, 1415
CviQI	GTAC	5 cut(s)	220, 724, 810, 2088, 2163
DdeI	CTNAG	3 cut(s)	396, 2217, 2502
DpnI	GATC	8 cut(s)	99, 960, 1254, 1284, 1314, 1738, 2134, 2232
DpnII	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
DraI	TTTAAA	1 cut(s)	1035
DraIII	CACNNNGTG	1 cut(s)	2540
DriI	GACNNNNNGTC	1 cut(s)	1423
EaeI	YGGCCR	1 cut(s)	1767
Eam1104I	CTCTTC	6 cut(s)	67, 710, 1080, 1369, 1988, 2310
Eam1105I	GACNNNNNGTC	1 cut(s)	1423
EarI	CTCTTC	6 cut(s)	67, 710, 1080, 1369, 1988, 2310
Ecl136II	GAGCTC	1 cut(s)	1874
Eco130I	CCWWGG	1 cut(s)	2568
Eco24I	GRGCYC	2 cut(s)	916, 1876
Eco53kI	GAGCTC	1 cut(s)	1874
Eco72I	CACGTG	1 cut(s)	743
Eco88I	CYCGRG	6 cut(s)	731, 792, 1129, 1346, 1569, 2070
Eco91I	GGTNACC	1 cut(s)	2563
EcoICRI	GAGCTC	1 cut(s)	1874
EcoO109I	RGGNCCY	1 cut(s)	751
EcoO65I	GGTNACC	1 cut(s)	2563
EcoRII	CCWGG	2 cut(s)	512, 2083
EcoT14I	CCWWGG	1 cut(s)	2568
EcoT38I	GRGCYC	2 cut(s)	916, 1876
ErhI	CCWWGG	1 cut(s)	2568
FalI	AAGNNNNNCTT	4 cut(s)	811, 843, 2367, 2399
FaqI	GGGAC	2 cut(s)	107, 266
FauI	CCCGC	2 cut(s)	268, 1384
FbaI	TGATCA	1 cut(s)	958
Fnu4HI	GCNGC	6 cut(s)	54, 522, 573, 786, 1797, 2147
FokI	GGATG	4 cut(s)	540, 1179, 1629, 2469
FriOI	GRGCYC	2 cut(s)	916, 1876
Fsp4HI	GCNGC	6 cut(s)	54, 522, 573, 786, 1797, 2147
GlaI	GCGC	1 cut(s)	2115
GluI	GCNGC	6 cut(s)	54, 522, 573, 786, 1797, 2147
HaeIII	GGCC	5 cut(s)	689, 752, 1361, 1769, 2500
HapII	CCGG	5 cut(s)	125, 234, 1347, 1456, 1548
HhaI	GCGC	1 cut(s)	2116
Hin6I	GCGC	1 cut(s)	2114
HinP1I	GCGC	1 cut(s)	2114
HincII	GTYRAC	2 cut(s)	427, 982
HindII	GTYRAC	2 cut(s)	427, 982
HindIII	AAGCTT	2 cut(s)	83, 329
HpaI	GTTAAC	1 cut(s)	982
HpaII	CCGG	5 cut(s)	125, 234, 1347, 1456, 1548
HphI	GGTGA	9 cut(s)	65, 856, 1052, 1285, 1676, 2073, 2085, 2152, 2575
Hpy166II	GTNNAC	4 cut(s)	427, 847, 982, 1774
Hpy188I	TCNGA	5 cut(s)	299, 397, 558, 624, 1477
Hpy8I	GTNNAC	4 cut(s)	427, 847, 982, 1774
Hpy99I	CGWCG	2 cut(s)	880, 2158
HpyAV	CCTTC	4 cut(s)	231, 679, 704, 1567
HpyCH4III	ACNGT	6 cut(s)	500, 1016, 1231, 1628, 2203, 2521
HpyCH4IV	ACGT	5 cut(s)	726, 742, 878, 2153, 2609
HpyCH4V	TGCA	3 cut(s)	698, 1653, 2057
HpyF10VI	GCNNNNNNNGC	3 cut(s)	695, 794, 839
HpyF3I	CTNAG	3 cut(s)	396, 2217, 2502
HpySE526I	ACGT	5 cut(s)	726, 742, 878, 2153, 2609
HspAI	GCGC	1 cut(s)	2114
Kpn2I	TCCGGA	1 cut(s)	233
Ksp22I	TGATCA	1 cut(s)	958
KspAI	GTTAAC	1 cut(s)	982
Kzo9I	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
LguI	GCTCTTC	2 cut(s)	710, 1988
LmnI	GCTCC	7 cut(s)	919, 1472, 1608, 1683, 1813, 2251, 2327
Lsp1109I	GCAGC	5 cut(s)	40, 508, 584, 772, 1783
LweI	GCATC	1 cut(s)	670
MabI	ACCWGGT	1 cut(s)	2083
MaeII	ACGT	5 cut(s)	726, 742, 878, 2153, 2609
MalI	GATC	8 cut(s)	99, 960, 1254, 1284, 1314, 1738, 2134, 2232
MboI	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
MfeI	CAATTG	4 cut(s)	450, 1576, 1728, 2422
MflI	RGATCY	2 cut(s)	1312, 1736
MhlI	GDGCHC	6 cut(s)	732, 916, 1876, 2010, 2077, 2256
MmeI	TCCRAC	3 cut(s)	394, 861, 1364
MroI	TCCGGA	1 cut(s)	233
MroXI	GAANNNNTTC	1 cut(s)	2468
MslI	CAYNNNNRTG	1 cut(s)	2035
MspA1I	CMGCKG	1 cut(s)	53
MspCI	CTTAAG	2 cut(s)	850, 1598
MspI	CCGG	5 cut(s)	125, 234, 1347, 1456, 1548
MspR9I	CCNGG	6 cut(s)	125, 514, 1347, 1348, 1456, 2085
MunI	CAATTG	4 cut(s)	450, 1576, 1728, 2422
MvaI	CCWGG	2 cut(s)	514, 2085
MvnI	CGCG	1 cut(s)	2207
MwoI	GCNNNNNNNGC	3 cut(s)	695, 794, 839
NciI	CCSGG	4 cut(s)	125, 1347, 1348, 1456
NdeII	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
NlaIV	GGNNCC	3 cut(s)	915, 1738, 2329
NmuCI	GTSAC	8 cut(s)	467, 539, 855, 971, 1192, 1273, 1415, 2563
NspI	RCATGY	5 cut(s)	1063, 1588, 2040, 2057, 2653
PaeI	GCATGC	1 cut(s)	1588
PaeR7I	CTCGAG	1 cut(s)	1129
PagI	TCATGA	2 cut(s)	1534, 2233
PciI	ACATGT	1 cut(s)	2036
PciSI	GCTCTTC	2 cut(s)	710, 1988
PcsI	WCGNNNNNNNCGW	1 cut(s)	535
PdmI	GAANNNNTTC	1 cut(s)	2468
PfeI	GAWTC	5 cut(s)	559, 995, 2267, 2280, 2464
PflFI	GACNNNGTC	1 cut(s)	155
PflMI	CCANNNNNTGG	1 cut(s)	2636
PinAI	ACCGGT	1 cut(s)	1547
PkrI	GCNGC	6 cut(s)	55, 523, 574, 787, 1798, 2148
PmaCI	CACGTG	1 cut(s)	743
PmlI	CACGTG	1 cut(s)	743
Ppu21I	YACGTR	2 cut(s)	727, 743
PscI	ACATGT	1 cut(s)	2036
PshAI	GACNNNNGTC	1 cut(s)	2201
PshBI	ATTAAT	1 cut(s)	2262
Psp124BI	GAGCTC	1 cut(s)	1876
Psp6I	CCWGG	2 cut(s)	512, 2083
PspCI	CACGTG	1 cut(s)	743
PspEI	GGTNACC	1 cut(s)	2563
PspGI	CCWGG	2 cut(s)	512, 2083
PspN4I	GGNNCC	3 cut(s)	915, 1738, 2329
PspPI	GGNCC	2 cut(s)	751, 2498
PsuI	RGATCY	2 cut(s)	1312, 1736
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	5 cut(s)	221, 725, 811, 2089, 2164
RsaNI	GTAC	5 cut(s)	220, 724, 810, 2088, 2163
RseI	CAYNNNNRTG	1 cut(s)	2035
SacI	GAGCTC	1 cut(s)	1876
SapI	GCTCTTC	2 cut(s)	710, 1988
SatI	GCNGC	6 cut(s)	54, 522, 573, 786, 1797, 2147
Sau3AI	GATC	8 cut(s)	97, 958, 1252, 1282, 1312, 1736, 2132, 2230
Sau96I	GGNCC	2 cut(s)	751, 2498
ScaI	AGTACT	1 cut(s)	2164
ScrFI	CCNGG	6 cut(s)	125, 514, 1347, 1348, 1456, 2085
SduI	GDGCHC	6 cut(s)	732, 916, 1876, 2010, 2077, 2256
SexAI	ACCWGGT	1 cut(s)	2083
SfaNI	GCATC	1 cut(s)	670
SfcI	CTRYAG	1 cut(s)	1098
Sfr274I	CTCGAG	1 cut(s)	1129
SlaI	CTCGAG	1 cut(s)	1129
SmaI	CCCGGG	1 cut(s)	1348
SmiMI	CAYNNNNRTG	1 cut(s)	2035
SmlI	CTYRAG	7 cut(s)	290, 506, 567, 850, 1129, 1598, 1784
SmoI	CTYRAG	7 cut(s)	290, 506, 567, 850, 1129, 1598, 1784
SphI	GCATGC	1 cut(s)	1588
SsiI	CCGC	6 cut(s)	275, 842, 1377, 1740, 2147, 2207
SstI	GAGCTC	1 cut(s)	1876
StyD4I	CCNGG	6 cut(s)	123, 512, 1345, 1346, 1454, 2083
StyI	CCWWGG	1 cut(s)	2568
TaaI	ACNGT	6 cut(s)	500, 1016, 1231, 1628, 2203, 2521
TaiI	ACGT	5 cut(s)	729, 745, 881, 2156, 2612
TatI	WGTACW	2 cut(s)	219, 2162
TauI	GCSGC	1 cut(s)	2149
TfiI	GAWTC	5 cut(s)	559, 995, 2267, 2280, 2464
TscAI	CASTG	4 cut(s)	763, 1021, 1374, 2524
TseFI	GTSAC	8 cut(s)	467, 539, 855, 971, 1192, 1273, 1415, 2563
TseI	GCWGC	5 cut(s)	53, 521, 572, 785, 1796
Tsp45I	GTSAC	8 cut(s)	467, 539, 855, 971, 1192, 1273, 1415, 2563
TspDTI	ATGAA	9 cut(s)	542, 723, 878, 1113, 1523, 2138, 2280, 2407, 2515
TspGWI	ACGGA	3 cut(s)	906, 1068, 1272
TspMI	CCCGGG	1 cut(s)	1346
TspRI	CASTG	4 cut(s)	763, 1021, 1374, 2524
Tth111I	GACNNNGTC	1 cut(s)	155
Van91I	CCANNNNNTGG	1 cut(s)	2636
Vha464I	CTTAAG	2 cut(s)	850, 1598
VspI	ATTAAT	1 cut(s)	2262
XapI	RAATTY	3 cut(s)	2179, 2512, 2632
XbaI	TCTAGA	2 cut(s)	1279, 1894
XceI	RCATGY	5 cut(s)	1063, 1588, 2040, 2057, 2653
XcmI	CCANNNNNNNNNTGG	2 cut(s)	342, 1160
XhoI	CTCGAG	1 cut(s)	1129
XmaI	CCCGGG	1 cut(s)	1346
XmnI	GAANNNNTTC	1 cut(s)	2468
ZrmI	AGTACT	1 cut(s)	2164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.