RLG00000036853

X-Pro dipeptidyl-peptidase (S15 family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0009940
Physical Location & Seq
Reverse (-)
85816224 .. 85817150
927 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036853

Sequence Viewer

Length: 639 bp
ATGTCAAACTGTACGGTCGAGACCTGCACAGTTGAGACCAGTGATGGAGCCAAGCTCAACACAAGGCTTTTCAGACCCAGAGAAGCCCAACAACAACATCAAATCAAGGAGGGCAACGATCTTGTGGTGGTTCTGGTCCATCCCTACTCTGTCCTGGGTGGCTGTCAGGGCCTTTTGAGAGGCATAGCAACTGGGTTAGCTGAGAAAGGTTTCAAAGCTGTCACTTTTGACATGAGAGGAGTTGGGAGGTCAACTGGGAAGGCTTCTCTTACTGGGTTTGCAGAAATCAAGGATGTGATTGCTGTCTGCAAATGGGTCCCTGAGAATTTGTCTGCTAATAGAATTCTGCTTGTGGGTTCTTCTGCAGTGGAAATCGAGGAAGGCGATGGGGAAGAGGTCAGGAGAGCGGTGGGAGGGGGAAGAGAGGGGTCGGAAGGCCGCCTAAGAAACCGGAGATGGCGGCGGCTGAAAGCGGAAAAAGGGGGAGAGACAATGGTGAGGCGGATCAGGTGGGGAGTGCAGGGAGGCCGAGGAAACGAACAAGGAGCTAATGCTATAGGATGCTTAGGTTCAGCTGGTTTTAGTTACTCTGGCCCAAAGAAGGCAAAAGAGAATCGGGGTATTACAAGAGGGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Hydrolase_4 Peptidase_S15

Protein Analysis

213

Amino Acids

22.74

Weight (kDa)

9.81

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S15 PF02129 15 - 198 2.5e-08 X-Pro dipeptidyl-peptidase (S15 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 32
AccBSI CCGCTC 1 cut(s) 407
AciI CCGC 6 cut(s) 407, 439, 460, 463, 473, 502
AclWI GGATC 1 cut(s) 512
AcsI RAATTY 2 cut(s) 325, 342
AfaI GTAC 1 cut(s) 13
AfiI CCNNNNNNNGG 1 cut(s) 601
AgsI TTSAA 1 cut(s) 214
AjnI CCWGG 1 cut(s) 153
AluBI AGCT 5 cut(s) 55, 200, 218, 548, 575
AluI AGCT 5 cut(s) 55, 200, 218, 548, 575
Alw26I GTCTC 3 cut(s) 14, 29, 482
AlwI GGATC 1 cut(s) 512
AoxI GGCC 4 cut(s) 169, 436, 526, 592
ApoI RAATTY 2 cut(s) 325, 342
Asp700I GAANNNNTTC 1 cut(s) 209
AspS9I GGNCC 4 cut(s) 136, 169, 316, 593
AsuHPI GGTGA 1 cut(s) 508
AvaII GGWCC 2 cut(s) 136, 316
BccI CCATC 4 cut(s) 38, 147, 380, 450
BciT130I CCWGG 1 cut(s) 155
BcoDI GTCTC 3 cut(s) 14, 29, 482
BfmI CTRYAG 2 cut(s) 363, 555
BfuAI ACCTGC 1 cut(s) 32
BisI GCNGC 3 cut(s) 439, 461, 464
BlsI GCNGC 3 cut(s) 440, 462, 465
Bme1390I CCNGG 1 cut(s) 155
Bme18I GGWCC 2 cut(s) 136, 316
BmgT120I GGNCC 4 cut(s) 136, 169, 316, 593
BmiI GGNNCC 3 cut(s) 49, 317, 318
BmrFI CCNGG 1 cut(s) 155
BmrI ACTGGG 3 cut(s) 201, 264, 282
BmsI GCATC 1 cut(s) 551
BmuI ACTGGG 3 cut(s) 201, 264, 282
BplI GAGNNNNNCTC 2 cut(s) 39, 71
Bpu10I CCTNAGC 1 cut(s) 565
BsaI GGTCTC 2 cut(s) 14, 29
BsaJI CCNNGG 2 cut(s) 154, 529
BsaWI WCCGGW 1 cut(s) 450
Bsc4I CCNNNNNNNGG 1 cut(s) 601
Bse1I ACTGG 4 cut(s) 39, 196, 259, 277
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 2 cut(s) 154, 529
BseGI GGATG 3 cut(s) 139, 298, 566
BseLI CCNNNNNNNGG 1 cut(s) 601
BseMII CTCAG 2 cut(s) 192, 312
BseNI ACTGG 4 cut(s) 39, 196, 259, 277
BseRI GAGGAG 1 cut(s) 252
BsgI GTGCAG 2 cut(s) 10, 539
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 4 cut(s) 171, 438, 528, 594
BsiEI CGRYCG 1 cut(s) 18
BsiSI CCGG 1 cut(s) 451
BslFI GGGAC 1 cut(s) 302
BslI CCNNNNNNNGG 1 cut(s) 601
BsmAI GTCTC 3 cut(s) 14, 29, 482
BsmFI GGGAC 1 cut(s) 302
BsnI GGCC 4 cut(s) 171, 438, 528, 594
Bso31I GGTCTC 2 cut(s) 14, 29
Bsp143I GATC 2 cut(s) 118, 504
BspACI CCGC 6 cut(s) 407, 439, 460, 463, 473, 502
BspANI GGCC 4 cut(s) 171, 438, 528, 594
BspCNI CTCAG 2 cut(s) 193, 313
BspLI GGNNCC 3 cut(s) 49, 317, 318
BspMAI CTGCAG 1 cut(s) 367
BspMI ACCTGC 1 cut(s) 32
BspPI GGATC 1 cut(s) 512
BspTNI GGTCTC 2 cut(s) 14, 29
BsrBI CCGCTC 1 cut(s) 407
BsrI ACTGG 4 cut(s) 39, 196, 259, 277
BssECI CCNNGG 2 cut(s) 154, 529
BssMI GATC 2 cut(s) 118, 504
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 3 cut(s) 11, 16, 31
Bst6I CTCTTC 2 cut(s) 387, 415
BstDEI CTNAG 4 cut(s) 201, 321, 443, 565
BstF5I GGATG 3 cut(s) 139, 298, 566
BstKTI GATC 2 cut(s) 121, 507
BstMAI GTCTC 3 cut(s) 14, 29, 482
BstMBI GATC 2 cut(s) 118, 504
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 1 cut(s) 168
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstSFI CTRYAG 2 cut(s) 363, 555
BsuRI GGCC 4 cut(s) 171, 438, 528, 594
BtgZI GCGATG 1 cut(s) 399
BtsCI GGATG 3 cut(s) 139, 298, 566
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 2 cut(s) 46, 372
BveI ACCTGC 1 cut(s) 32
Cfr13I GGNCC 4 cut(s) 136, 169, 316, 593
Csp6I GTAC 1 cut(s) 12
CviAII CATG 1 cut(s) 232
CviQI GTAC 1 cut(s) 12
DdeI CTNAG 4 cut(s) 201, 321, 443, 565
DpnI GATC 2 cut(s) 120, 506
DpnII GATC 2 cut(s) 118, 504
Eam1104I CTCTTC 2 cut(s) 387, 415
EarI CTCTTC 2 cut(s) 387, 415
EciI GGCGGA 1 cut(s) 517
Eco31I GGTCTC 2 cut(s) 14, 29
Eco47I GGWCC 2 cut(s) 136, 316
EcoO109I RGGNCCY 2 cut(s) 169, 316
EcoRI GAATTC 1 cut(s) 342
EcoRII CCWGG 1 cut(s) 153
FaeI CATG 1 cut(s) 235
FaiI YATR 3 cut(s) 185, 233, 557
FaqI GGGAC 1 cut(s) 302
FatI CATG 1 cut(s) 231
Fnu4HI GCNGC 3 cut(s) 439, 461, 464
FokI GGATG 3 cut(s) 126, 305, 573
Fsp4HI GCNGC 3 cut(s) 439, 461, 464
GluI GCNGC 3 cut(s) 439, 461, 464
HaeIII GGCC 4 cut(s) 171, 438, 528, 594
HapII CCGG 1 cut(s) 451
Hin1II CATG 1 cut(s) 235
HincII GTYRAC 1 cut(s) 252
HindII GTYRAC 1 cut(s) 252
HinfI GANTC 1 cut(s) 613
HpaII CCGG 1 cut(s) 451
HphI GGTGA 1 cut(s) 508
Hpy166II GTNNAC 1 cut(s) 252
Hpy188I TCNGA 2 cut(s) 74, 433
Hpy188III TCNNGA 2 cut(s) 19, 400
Hpy8I GTNNAC 1 cut(s) 252
HpyAV CCTTC 4 cut(s) 253, 374, 428, 595
HpyCH4III ACNGT 3 cut(s) 11, 16, 31
HpyCH4V TGCA 5 cut(s) 27, 281, 309, 365, 520
HpyF10VI GCNNNNNNNGC 1 cut(s) 168
HpyF3I CTNAG 4 cut(s) 201, 321, 443, 565
Hsp92II CATG 1 cut(s) 235
KflI GGGWCCC 1 cut(s) 316
Kzo9I GATC 2 cut(s) 118, 504
LmnI GCTCC 2 cut(s) 47, 545
LweI GCATC 1 cut(s) 551
MaeIII GTNAC 2 cut(s) 220, 584
MalI GATC 2 cut(s) 120, 506
MbiI CCGCTC 1 cut(s) 407
MboI GATC 2 cut(s) 118, 504
MboII GAAGA 3 cut(s) 351, 404, 432
MluCI AATT 2 cut(s) 325, 342
MmeI TCCRAC 1 cut(s) 411
MroXI GAANNNNTTC 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 1 cut(s) 451
MspR9I CCNGG 1 cut(s) 155
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 1 cut(s) 168
NdeII GATC 2 cut(s) 118, 504
NlaIII CATG 1 cut(s) 235
NlaIV GGNNCC 3 cut(s) 49, 317, 318
NmeAIII GCCGAG 1 cut(s) 554
NmuCI GTSAC 1 cut(s) 220
PcsI WCGNNNNNNNCGW 1 cut(s) 381
PdmI GAANNNNTTC 1 cut(s) 209
PfeI GAWTC 1 cut(s) 613
PkrI GCNGC 3 cut(s) 440, 462, 465
PpuMI RGGWCCY 1 cut(s) 316
Psp5II RGGWCCY 1 cut(s) 316
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 3 cut(s) 49, 317, 318
PspPI GGNCC 4 cut(s) 136, 169, 316, 593
PspPPI RGGWCCY 1 cut(s) 316
PstI CTGCAG 1 cut(s) 367
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 1 cut(s) 13
RsaNI GTAC 1 cut(s) 12
SatI GCNGC 3 cut(s) 439, 461, 464
Sau3AI GATC 2 cut(s) 118, 504
Sau96I GGNCC 4 cut(s) 136, 169, 316, 593
ScrFI CCNGG 1 cut(s) 155
SfaNI GCATC 1 cut(s) 551
SfcI CTRYAG 2 cut(s) 363, 555
SinI GGWCC 2 cut(s) 136, 316
Sse9I AATT 2 cut(s) 325, 342
SsiI CCGC 6 cut(s) 407, 439, 460, 463, 473, 502
StyD4I CCNGG 1 cut(s) 153
TaaI ACNGT 3 cut(s) 11, 16, 31
TaqI TCGA 2 cut(s) 18, 375
TasI AATT 2 cut(s) 325, 342
TauI GCSGC 3 cut(s) 441, 463, 466
TfiI GAWTC 1 cut(s) 613
TscAI CASTG 2 cut(s) 46, 372
TseFI GTSAC 1 cut(s) 220
Tsp45I GTSAC 1 cut(s) 220
TspRI CASTG 2 cut(s) 46, 372
VpaK11BI GGWCC 2 cut(s) 136, 316
XapI RAATTY 2 cut(s) 325, 342
XmnI GAANNNNTTC 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.