Rhamnogalacturonate lyase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g34130 |
| malus_domestica | MD15G1389100.v1.1 |
| prunus_persica | Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 |
| pyrus_communis | pycom15g34880 pycom15g34890 |
| rosa_chinensis | RchiOBHm_Chr7g0233701 |
| rosa_laevigata | RLG00000001241 |
| rosa_multiflora | Rmu_co7977656.1_g000001 Rmu_sc0000556.1_g000027 Rmu_sc0005305.1_g000002 Rmu_sc0005305.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00227080 |
| rosa_rugosa | Rorug07G0282100 Rorug07G0282200 Rorug07G0282200 |
| rosa_samantha | Rh7AG438500 Rh7BG411200 Rh7CG458100 Rh7DG427500 |
| rosa_wichuraiana | Rw7G036160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 69 |
| AclWI | GGATC | 3 cut(s) | 48, 68, 81 |
| AcsI | RAATTY | 1 cut(s) | 13 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 69, 210 |
| AgsI | TTSAA | 2 cut(s) | 178, 196 |
| AjnI | CCWGG | 1 cut(s) | 209 |
| AluBI | AGCT | 2 cut(s) | 52, 226 |
| AluI | AGCT | 2 cut(s) | 52, 226 |
| AlwI | GGATC | 3 cut(s) | 48, 68, 81 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApoI | RAATTY | 1 cut(s) | 13 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 104, 136 |
| AsuHPI | GGTGA | 1 cut(s) | 52 |
| BamHI | GGATCC | 1 cut(s) | 73 |
| BciT130I | CCWGG | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 1 cut(s) | 211 |
| BmiI | GGNNCC | 1 cut(s) | 75 |
| BmrFI | CCNGG | 1 cut(s) | 211 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 69, 210 |
| BseBI | CCWGG | 1 cut(s) | 211 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 69, 210 |
| BseMII | CTCAG | 2 cut(s) | 27, 241 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BslFI | GGGAC | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 69, 210 |
| BsmFI | GGGAC | 1 cut(s) | 83 |
| BsnI | GGCC | 1 cut(s) | 187 |
| Bsp143I | GATC | 2 cut(s) | 40, 73 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspCNI | CTCAG | 2 cut(s) | 28, 240 |
| BspLI | GGNNCC | 1 cut(s) | 75 |
| BspPI | GGATC | 3 cut(s) | 48, 68, 81 |
| BssMI | GATC | 2 cut(s) | 40, 73 |
| Bst2UI | CCWGG | 1 cut(s) | 211 |
| Bst4CI | ACNGT | 2 cut(s) | 22, 217 |
| Bst6I | CTCTTC | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 1 cut(s) | 189 |
| BstDEI | CTNAG | 2 cut(s) | 36, 227 |
| BstKTI | GATC | 2 cut(s) | 43, 76 |
| BstMBI | GATC | 2 cut(s) | 40, 73 |
| BstNI | CCWGG | 1 cut(s) | 211 |
| BstSCI | CCNGG | 1 cut(s) | 209 |
| BstX2I | RGATCY | 1 cut(s) | 73 |
| BstYI | RGATCY | 1 cut(s) | 73 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 1 cut(s) | 189 |
| CviJI | RGCY | 3 cut(s) | 52, 187, 226 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 187, 226 |
| DdeI | CTNAG | 2 cut(s) | 36, 227 |
| DpnI | GATC | 2 cut(s) | 42, 75 |
| DpnII | GATC | 2 cut(s) | 40, 73 |
| DraI | TTTAAA | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 1 cut(s) | 145 |
| EcoRII | CCWGG | 1 cut(s) | 209 |
| FaiI | YATR | 3 cut(s) | 26, 110, 168 |
| FaqI | GGGAC | 1 cut(s) | 83 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| HphI | GGTGA | 1 cut(s) | 52 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 230 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 2 cut(s) | 22, 217 |
| HpyF3I | CTNAG | 2 cut(s) | 36, 227 |
| Kzo9I | GATC | 2 cut(s) | 40, 73 |
| LpnPI | CCDG | 4 cut(s) | 76, 196, 201, 223 |
| MaeIII | GTNAC | 1 cut(s) | 134 |
| MalI | GATC | 2 cut(s) | 42, 75 |
| MboI | GATC | 2 cut(s) | 40, 73 |
| MboII | GAAGA | 1 cut(s) | 132 |
| MflI | RGATCY | 1 cut(s) | 73 |
| MluCI | AATT | 1 cut(s) | 13 |
| MnlI | CCTC | 3 cut(s) | 31, 79, 88 |
| MseI | TTAA | 2 cut(s) | 104, 222 |
| MslI | CAYNNNNRTG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 1 cut(s) | 211 |
| MvaI | CCWGG | 1 cut(s) | 211 |
| NdeII | GATC | 2 cut(s) | 40, 73 |
| NlaIV | GGNNCC | 1 cut(s) | 75 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 69 |
| Psp6I | CCWGG | 1 cut(s) | 209 |
| PspGI | CCWGG | 1 cut(s) | 209 |
| PspN4I | GGNNCC | 1 cut(s) | 75 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 33 |
| PsuI | RGATCY | 1 cut(s) | 73 |
| RseI | CAYNNNNRTG | 1 cut(s) | 65 |
| SaqAI | TTAA | 2 cut(s) | 104, 222 |
| Sau3AI | GATC | 2 cut(s) | 40, 73 |
| ScrFI | CCNGG | 1 cut(s) | 211 |
| SetI | ASST | 3 cut(s) | 54, 122, 228 |
| SgeI | CNNG | 8 cut(s) | 75, 136, 156, 187, 200, 211, 222, 223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 65 |
| Sse9I | AATT | 1 cut(s) | 13 |
| StyD4I | CCNGG | 1 cut(s) | 209 |
| TaaI | ACNGT | 2 cut(s) | 22, 217 |
| TasI | AATT | 1 cut(s) | 13 |
| Tru1I | TTAA | 2 cut(s) | 104, 222 |
| Tru9I | TTAA | 2 cut(s) | 104, 222 |
| TspDTI | ATGAA | 2 cut(s) | 45, 183 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 69 |
| XapI | RAATTY | 1 cut(s) | 13 |