Rorug07G0282200

Rhamnogalacturonate lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0008190
Physical Location & Seq
Reverse (-)
27395558 .. 27399716
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0282200.1

Sequence Viewer

Length: 1983 bp
ATGGGGGAGGCATCAGAAACGACGATGACGATAATGAACAATCAAGCCCCTCCTAAAAAGAAGAAGGGCCGACCTTCGCTTCTCGATCTCCAGAAGCGCTTCCTCCAGCAGCAGCAAAACCCCCATTTCCTCAACCCTAGCGCCGCCGCCGCCGCCGCCCGCCCCGCCACTCGCCGCACCAGCAACCCTAACGCCCCTCCTCCTCCTTCAGACGACGACGACGACGAGCGCGCCAAGAAGAAGCACAAGCTCCTCCTCGGAATCAACCACCAACACCACAATCGCAAACCGACATTGTCGCCGTTCAATTCCGGCCCCTACGGCTCCGATTCCAATGCCGACGACGACGATCCGGACAAGATCGGATCCAATCATACGAGCCAAAGCGTGTTGAAAGCGACTGACAGTAGCAGTATTCATGGGACGCAGGTGGAGTTTGGTCCCACTACGCCTTTGCCAGACAAAAAGTTGTTGGTGTTCATCCTTGATAGGCTTCAAAAAAAGGACACTCGTGGAGTGTTTTCGGAGCCTGTGGATCCAGAAGAGCTGCCTGATTATCATGAAATCATTGAAAACCCGATGGATTTTGGAACTGTCAGGGAGAAACTGGATCGGGGAGCCTATGCCAACTTGGAACAGTTTGAGAAAGATGTCTTCTTGATATCTTCAAATGCAATGCAGTATAATGCACCAGACACGATTTATTTCCGACAGGCACGGTCTATCCAAGAACTTGCGAAAAAGGACTTTGAAAATTTGAGGCAAGACAACACCGGTGATGGTGGTGAGCCCAAACCAAAAGTTGCCAGGAGAGGCAGGCCACCCGGCAGCAAGACCATGAAAAAGTCGATTGACTTGGCTCCAGTTGAACGTCTTGGTCCTCAATATTTCTCAGAAACGACTCTTCCCCCTGGAGGAGAGACTTCGAGCTTGTCCAATAGTTACAATTTGAGAAAAGGACCCGCTTCATACAAGTTTAGGACTGCTGATGCATTAAACAGAGCTCCACATGGATCTCTTGGTGGTGATACTAATGCTAACTGGTTGTCTGAATTGGAGAATGAATTTCCGGCTTCAGTATTGAGGAGCGTGCTAAGGTATGGAAAGAAACAGTTTCCAGTAGACGAGAACAGACGTGAAACCTATAGGCAGTCTCTGGCTTCAGAACATGAACCATCTGAACTTACTGGTCTCGAAGGGGAGTGGAACCAACTTATGGCGGTAGGTGTAGCTGCGGAGGAGCATGGTTATGCAAGAAGTATGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCTTGGAAGATTGCTTCTAAGCGGATTGGAAGTGTTTTGCCTATTGGAGTTGAGTTTGGTCCTGGATGGGTAGGAGAAAATGAGTCATCAAGGTTGCAGCAGTTTTCATTCCGTCAGGGAGAGGATAAGGTTCAATGCAACCCTGCATCTGATGACCATAAAGACAGACTTCGATGTCAAAGTACATCAGGCCGCCTAAATTATGTTGCAGATAGATATTTGCTGCAAAACGGTGTTAACATGGAAAACTGTAGAGAATTCAATTCCCAAAATGGGTTGGCGTCGCTTAACAGTGGTGTTAGTGGGATACGACCTGTGCCTCCTTTCCAGAATTCCATGATTCACTCTGGGATGTCAAGTTCGACCAACACTTCAGTACCATCTCATCATCAAATGGTCGGCATGTTTTCAGAGAGGAATATGAACACACAGTCGATGCCTATAGGCGATATTGATTCAAATGAAGCCAGATCAGAAATTTCAAGTAGATCAAGGAATCCCTTAGCCCAAGCACAACCTCAATTGGCGTATGGTGGGGAAACTTCTTGGCAGGGTTTATCGATGAACAATAAACAGGTTTCTTATTCATTACCCCCGGACCTGAATGTTGAATTCGGTGCACCAGGCTCTCCCAGTTCTCTTATTCAAATTGGCATGCCACAGCAACCAGATTTAGCTTTGCAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

660

Amino Acids

72.82

Weight (kDa)

6.46

Isoelectric Point (pI)

48.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 161 - 240 4.7e-23 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 418
AasI GACNNNNNNGTC 1 cut(s) 1467
Acc36I ACCTGC 1 cut(s) 418
AccB7I CCANNNNNTGG 1 cut(s) 1216
AccI GTMKAC 1 cut(s) 1122
AccII CGCG 1 cut(s) 231
AccIII TCCGGA 1 cut(s) 352
AclWI GGATC 7 cut(s) 344, 360, 373, 530, 543, 618, 1021
AcsI RAATTY 6 cut(s) 754, 1064, 1550, 1624, 1770, 1904
AcuI CTGAAG 4 cut(s) 192, 1059, 1146, 1650
AcyI GRCGYC 1 cut(s) 1574
AfaI GTAC 2 cut(s) 1477, 1671
AfeI AGCGCT 1 cut(s) 98
AfiI CCNNNNNNNGG 3 cut(s) 914, 1216, 1566
AgeI ACCGGT 1 cut(s) 773
AjiI CACGTC 1 cut(s) 1136
AjnI CCWGG 4 cut(s) 806, 910, 1354, 1915
AloI GAACNNNNNNTCC 2 cut(s) 1636, 1668
AluBI AGCT 6 cut(s) 250, 547, 930, 1004, 1232, 1970
AluI AGCT 6 cut(s) 250, 547, 930, 1004, 1232, 1970
Alw21I GWGCWC 2 cut(s) 1006, 1915
Alw26I GTCTC 3 cut(s) 914, 1158, 1196
Alw44I GTGCAC 1 cut(s) 1911
AlwI GGATC 7 cut(s) 344, 360, 373, 530, 543, 618, 1021
AlwNI CAGNNNCTG 1 cut(s) 1156
Aor13HI TCCGGA 1 cut(s) 352
Aor51HI AGCGCT 1 cut(s) 98
AoxI GGCC 4 cut(s) 67, 313, 818, 1483
ApaLI GTGCAC 1 cut(s) 1911
ApeKI GCWGC 8 cut(s) 109, 112, 547, 828, 1232, 1274, 1390, 1516
ApoI RAATTY 6 cut(s) 754, 1064, 1550, 1624, 1770, 1904
AsiGI ACCGGT 1 cut(s) 773
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 4 cut(s) 99, 143, 231, 233
AspS9I GGNCC 8 cut(s) 67, 314, 440, 878, 959, 1286, 1352, 1891
AsuC2I CCSGG 2 cut(s) 825, 1889
AsuHPI GGTGA 3 cut(s) 788, 797, 1037
AvaII GGWCC 6 cut(s) 440, 878, 959, 1286, 1352, 1891
BaeGI GKGCMC 1 cut(s) 1915
BaeI ACNNNNGTAYC 2 cut(s) 1653, 1686
BamHI GGATCC 2 cut(s) 365, 535
BanII GRGCYC 2 cut(s) 792, 1006
BauI CACGAG 1 cut(s) 510
BbsI GAAGAC 1 cut(s) 646
Bbv12I GWGCWC 2 cut(s) 1006, 1915
BbvI GCAGC 8 cut(s) 121, 124, 534, 840, 1219, 1261, 1402, 1503
BccI CCATC 5 cut(s) 574, 773, 1183, 1353, 1681
BceAI ACGGC 2 cut(s) 286, 337
BcgI CGANNNNNNTGC 2 cut(s) 317, 351
BciT130I CCWGG 4 cut(s) 808, 912, 1356, 1917
BciVI GTATCC 1 cut(s) 1593
BcnI CCSGG 2 cut(s) 825, 1889
BcoDI GTCTC 3 cut(s) 914, 1158, 1196
BfaI CTAG 1 cut(s) 138
BfmI CTRYAG 3 cut(s) 1144, 1543, 1734
BfoI RGCGCY 2 cut(s) 100, 144
BfuAI ACCTGC 1 cut(s) 418
BfuI GTATCC 1 cut(s) 1593
BglI GCCNNNNNGGC 1 cut(s) 321
Bme1390I CCNGG 6 cut(s) 808, 825, 912, 1356, 1889, 1917
Bme18I GGWCC 6 cut(s) 440, 878, 959, 1286, 1352, 1891
BmgBI CACGTC 1 cut(s) 1136
BmgT120I GGNCC 8 cut(s) 67, 314, 440, 878, 959, 1286, 1352, 1891
BmrFI CCNGG 6 cut(s) 808, 825, 912, 1356, 1889, 1917
BmrI ACTGGG 1 cut(s) 1920
BmsI GCATC 4 cut(s) 20, 979, 1448, 1719
BmuI ACTGGG 1 cut(s) 1920
BpiI GAAGAC 1 cut(s) 646
BpmI CTGGAG 4 cut(s) 74, 89, 846, 933
Bpu10I CCTNAGC 2 cut(s) 1094, 1795
BpuMI CCSGG 2 cut(s) 825, 1889
Bsa29I ATCGAT 1 cut(s) 1853
BsaHI GRCGYC 1 cut(s) 1574
BsaI GGTCTC 1 cut(s) 1196
BsaJI CCNNGG 3 cut(s) 256, 910, 1887
BsaWI WCCGGW 2 cut(s) 352, 773
Bsc4I CCNNNNNNNGG 3 cut(s) 914, 1216, 1566
Bse118I RCCGGY 1 cut(s) 773
Bse1I ACTGG 6 cut(s) 612, 863, 1046, 1118, 1192, 1926
Bse3DI GCAATG 1 cut(s) 681
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 4 cut(s) 808, 912, 1356, 1917
BseCI ATCGAT 1 cut(s) 1853
BseDI CCNNGG 3 cut(s) 256, 910, 1887
BseGI GGATG 3 cut(s) 480, 1364, 1650
BseLI CCNNNNNNNGG 3 cut(s) 914, 1216, 1566
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 6 cut(s) 612, 863, 1046, 1118, 1192, 1926
BsePI GCGCGC 1 cut(s) 229
BseRI GAGGAG 7 cut(s) 189, 192, 242, 245, 930, 1099, 1253
BseSI GKGCMC 1 cut(s) 1915
BseXI GCAGC 8 cut(s) 121, 124, 534, 840, 1219, 1261, 1402, 1503
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 4 cut(s) 69, 315, 820, 1485
BshTI ACCGGT 1 cut(s) 773
BshVI ATCGAT 1 cut(s) 1853
BsiHKAI GWGCWC 2 cut(s) 1006, 1915
BsiSI CCGG 6 cut(s) 312, 353, 774, 825, 1070, 1889
BslFI GGGAC 2 cut(s) 426, 436
BslI CCNNNNNNNGG 3 cut(s) 914, 1216, 1566
BsmAI GTCTC 3 cut(s) 914, 1158, 1196
BsmFI GGGAC 2 cut(s) 426, 436
BsnI GGCC 4 cut(s) 69, 315, 820, 1485
Bso31I GGTCTC 1 cut(s) 1196
Bsp1286I GDGCHC 3 cut(s) 792, 1006, 1915
Bsp13I TCCGGA 1 cut(s) 352
Bsp143I GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
BspANI GGCC 4 cut(s) 69, 315, 820, 1485
BspCNI CTCAG 1 cut(s) 905
BspDI ATCGAT 1 cut(s) 1853
BspEI TCCGGA 1 cut(s) 352
BspFNI CGCG 1 cut(s) 231
BspHI TCATGA 1 cut(s) 559
BspMI ACCTGC 1 cut(s) 418
BspPI GGATC 7 cut(s) 344, 360, 373, 530, 543, 618, 1021
BspQI GCTCTTC 1 cut(s) 537
BspTNI GGTCTC 1 cut(s) 1196
BsrDI GCAATG 1 cut(s) 681
BsrFI RCCGGY 1 cut(s) 773
BsrI ACTGG 6 cut(s) 612, 863, 1046, 1118, 1192, 1926
BssAI RCCGGY 1 cut(s) 773
BssECI CCNNGG 3 cut(s) 256, 910, 1887
BssHII GCGCGC 1 cut(s) 229
BssMI GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
BssNI GRCGYC 1 cut(s) 1574
BssSI CACGAG 1 cut(s) 510
Bst2BI CACGAG 1 cut(s) 510
Bst2UI CCWGG 4 cut(s) 808, 912, 1356, 1917
Bst4CI ACNGT 9 cut(s) 407, 595, 639, 720, 1113, 1526, 1544, 1586, 1725
Bst6I CTCTTC 2 cut(s) 537, 909
BstACI GRCGYC 1 cut(s) 1574
BstC8I GCNNGC 5 cut(s) 160, 231, 818, 1091, 1949
BstDEI CTNAG 4 cut(s) 892, 1094, 1311, 1795
BstF5I GGATG 3 cut(s) 480, 1364, 1650
BstFNI CGCG 1 cut(s) 231
BstH2I RGCGCY 2 cut(s) 100, 144
BstHHI GCGC 4 cut(s) 99, 143, 231, 233
BstKTI GATC 9 cut(s) 88, 352, 363, 368, 538, 613, 1016, 1766, 1784
BstMAI GTCTC 3 cut(s) 914, 1158, 1196
BstMBI GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
BstMWI GCNNNNNNNGC 7 cut(s) 149, 152, 155, 164, 180, 321, 1271
BstNI CCWGG 4 cut(s) 808, 912, 1356, 1917
BstNSI RCATGY 2 cut(s) 1699, 1951
BstSCI CCNGG 6 cut(s) 806, 823, 910, 1354, 1887, 1915
BstSFI CTRYAG 3 cut(s) 1144, 1543, 1734
BstSLI GKGCMC 1 cut(s) 1915
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 8 cut(s) 121, 124, 534, 840, 1219, 1261, 1402, 1503
BstV2I GAAGAC 1 cut(s) 646
BstX2I RGATCY 3 cut(s) 365, 535, 1013
BstYI RGATCY 3 cut(s) 365, 535, 1013
Bsu15I ATCGAT 1 cut(s) 1853
BsuI GTATCC 1 cut(s) 1593
BsuRI GGCC 4 cut(s) 69, 315, 820, 1485
BsuTUI ATCGAT 1 cut(s) 1853
BtrI CACGTC 1 cut(s) 1136
BtsCI GGATG 3 cut(s) 480, 1364, 1650
BtsIMutI CAGTG 1 cut(s) 1591
BveI ACCTGC 1 cut(s) 418
Cac8I GCNNGC 5 cut(s) 160, 231, 818, 1091, 1949
CaiI CAGNNNCTG 1 cut(s) 1156
CciI TCATGA 1 cut(s) 559
CfoI GCGC 4 cut(s) 99, 143, 231, 233
Cfr10I RCCGGY 1 cut(s) 773
Cfr13I GGNCC 8 cut(s) 67, 314, 440, 878, 959, 1286, 1352, 1891
ClaI ATCGAT 1 cut(s) 1853
CseI GACGC 2 cut(s) 433, 1563
Csp6I GTAC 2 cut(s) 1476, 1670
CspAI ACCGGT 1 cut(s) 773
CviQI GTAC 2 cut(s) 1476, 1670
DdeI CTNAG 4 cut(s) 892, 1094, 1311, 1795
DpnI GATC 9 cut(s) 87, 351, 362, 367, 537, 612, 1015, 1765, 1783
DpnII GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
DrdI GACNNNNNNGTC 1 cut(s) 1467
DseDI GACNNNNNNGTC 1 cut(s) 1467
Eam1104I CTCTTC 2 cut(s) 537, 909
EarI CTCTTC 2 cut(s) 537, 909
Ecl136II GAGCTC 1 cut(s) 1004
Eco24I GRGCYC 2 cut(s) 792, 1006
Eco31I GGTCTC 1 cut(s) 1196
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 6 cut(s) 440, 878, 959, 1286, 1352, 1891
Eco47III AGCGCT 1 cut(s) 98
Eco53kI GAGCTC 1 cut(s) 1004
Eco57I CTGAAG 4 cut(s) 192, 1059, 1146, 1650
EcoICRI GAGCTC 1 cut(s) 1004
EcoO109I RGGNCCY 1 cut(s) 959
EcoRI GAATTC 3 cut(s) 1550, 1624, 1904
EcoRII CCWGG 4 cut(s) 806, 910, 1354, 1915
EcoRV GATATC 1 cut(s) 663
EcoT22I ATGCAT 1 cut(s) 994
EcoT38I GRGCYC 2 cut(s) 792, 1006
FalI AAGNNNNNCTT 2 cut(s) 1446, 1478
FaqI GGGAC 2 cut(s) 426, 436
FauI CCCGC 3 cut(s) 167, 172, 970
FblI GTMKAC 1 cut(s) 1122
FokI GGATG 3 cut(s) 467, 1371, 1657
FriOI GRGCYC 2 cut(s) 792, 1006
FspBI CTAG 1 cut(s) 138
GlaI GCGC 4 cut(s) 98, 142, 230, 232
GsuI CTGGAG 4 cut(s) 74, 89, 846, 933
HaeII RGCGCY 2 cut(s) 100, 144
HaeIII GGCC 4 cut(s) 69, 315, 820, 1485
HapII CCGG 6 cut(s) 312, 353, 774, 825, 1070, 1889
HgaI GACGC 2 cut(s) 433, 1563
HhaI GCGC 4 cut(s) 99, 143, 231, 233
Hin1I GRCGYC 1 cut(s) 1574
Hin6I GCGC 4 cut(s) 97, 141, 229, 231
HinP1I GCGC 4 cut(s) 97, 141, 229, 231
HincII GTYRAC 1 cut(s) 1531
HindII GTYRAC 1 cut(s) 1531
HinfI GANTC 7 cut(s) 261, 329, 901, 1376, 1633, 1748, 1789
HpaI GTTAAC 1 cut(s) 1531
HpaII CCGG 6 cut(s) 312, 353, 774, 825, 1070, 1889
HphI GGTGA 3 cut(s) 788, 797, 1037
Hpy166II GTNNAC 3 cut(s) 1123, 1531, 1913
Hpy188III TCNNGA 8 cut(s) 83, 91, 353, 539, 560, 658, 1193, 1621
Hpy8I GTNNAC 3 cut(s) 1123, 1531, 1913
Hpy99I CGWCG 9 cut(s) 25, 218, 221, 224, 227, 344, 347, 350, 1579
HpyAV CCTTC 4 cut(s) 58, 84, 216, 1190
HpyCH4III ACNGT 9 cut(s) 407, 595, 639, 720, 1113, 1526, 1544, 1586, 1725
HpyCH4IV ACGT 2 cut(s) 871, 1135
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 152, 155, 164, 180, 321, 1271
HpyF3I CTNAG 4 cut(s) 892, 1094, 1311, 1795
HpySE526I ACGT 2 cut(s) 871, 1135
Hsp92I GRCGYC 1 cut(s) 1574
HspAI GCGC 4 cut(s) 97, 141, 229, 231
Kpn2I TCCGGA 1 cut(s) 352
KspAI GTTAAC 1 cut(s) 1531
Kzo9I GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 8 cut(s) 255, 329, 526, 617, 865, 1009, 1086, 1240
Lsp1109I GCAGC 8 cut(s) 121, 124, 534, 840, 1219, 1261, 1402, 1503
LweI GCATC 4 cut(s) 20, 979, 1448, 1719
MaeI CTAG 1 cut(s) 138
MaeII ACGT 2 cut(s) 871, 1135
MaeIII GTNAC 1 cut(s) 941
MalI GATC 9 cut(s) 87, 351, 362, 367, 537, 612, 1015, 1765, 1783
MboI GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
MboII GAAGA 7 cut(s) 73, 250, 554, 646, 657, 896, 1312
MfeI CAATTG 1 cut(s) 1814
MflI RGATCY 3 cut(s) 365, 535, 1013
MhlI GDGCHC 3 cut(s) 792, 1006, 1915
MlyI GAGTC 2 cut(s) 895, 1385
MmeI TCCRAC 1 cut(s) 733
Mph1103I ATGCAT 1 cut(s) 994
MroI TCCGGA 1 cut(s) 352
MroXI GAANNNNTTC 1 cut(s) 98
MseI TTAA 3 cut(s) 995, 1530, 1581
MslI CAYNNNNRTG 1 cut(s) 1248
MspI CCGG 6 cut(s) 312, 353, 774, 825, 1070, 1889
MspR9I CCNGG 6 cut(s) 808, 825, 912, 1356, 1889, 1917
MunI CAATTG 1 cut(s) 1814
MvaI CCWGG 4 cut(s) 808, 912, 1356, 1917
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 7 cut(s) 149, 152, 155, 164, 180, 321, 1271
NciI CCSGG 2 cut(s) 825, 1889
NdeII GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
NsiI ATGCAT 1 cut(s) 994
NspI RCATGY 2 cut(s) 1699, 1951
PaeI GCATGC 1 cut(s) 1951
PagI TCATGA 1 cut(s) 559
PaqCI CACCTGC 1 cut(s) 418
PauI GCGCGC 1 cut(s) 229
PciSI GCTCTTC 1 cut(s) 537
PcsI WCGNNNNNNNCGW 3 cut(s) 26, 219, 222
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 5 cut(s) 261, 329, 1633, 1748, 1789
PflFI GACNNNGTC 1 cut(s) 295
PflMI CCANNNNNTGG 1 cut(s) 1216
PfoI TCCNGGA 1 cut(s) 1354
PinAI ACCGGT 1 cut(s) 773
PleI GAGTC 2 cut(s) 895, 1384
PpsI GAGTC 2 cut(s) 895, 1384
PpuMI RGGWCCY 1 cut(s) 959
Psp124BI GAGCTC 1 cut(s) 1006
Psp5II RGGWCCY 1 cut(s) 959
Psp6I CCWGG 4 cut(s) 806, 910, 1354, 1915
PspGI CCWGG 4 cut(s) 806, 910, 1354, 1915
PspPI GGNCC 8 cut(s) 67, 314, 440, 878, 959, 1286, 1352, 1891
PspPPI RGGWCCY 1 cut(s) 959
PstNI CAGNNNCTG 1 cut(s) 1156
PsuI RGATCY 3 cut(s) 365, 535, 1013
PsyI GACNNNGTC 1 cut(s) 295
PteI GCGCGC 1 cut(s) 229
RsaI GTAC 2 cut(s) 1477, 1671
RsaNI GTAC 2 cut(s) 1476, 1670
RseI CAYNNNNRTG 1 cut(s) 1248
SacI GAGCTC 1 cut(s) 1006
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 3 cut(s) 995, 1530, 1581
Sau3AI GATC 9 cut(s) 85, 349, 360, 365, 535, 610, 1013, 1763, 1781
Sau96I GGNCC 8 cut(s) 67, 314, 440, 878, 959, 1286, 1352, 1891
SchI GAGTC 2 cut(s) 895, 1385
ScrFI CCNGG 6 cut(s) 808, 825, 912, 1356, 1889, 1917
SduI GDGCHC 3 cut(s) 792, 1006, 1915
SfaNI GCATC 4 cut(s) 20, 979, 1448, 1719
SfcI CTRYAG 3 cut(s) 1144, 1543, 1734
SgrAI CRCCGGYG 1 cut(s) 773
SinI GGWCC 6 cut(s) 440, 878, 959, 1286, 1352, 1891
SmiMI CAYNNNNRTG 1 cut(s) 1248
SphI GCATGC 1 cut(s) 1951
SspI AATATT 1 cut(s) 887
SspMI CTAG 1 cut(s) 138
SstI GAGCTC 1 cut(s) 1006
StyD4I CCNGG 6 cut(s) 806, 823, 910, 1354, 1887, 1915
TaaI ACNGT 9 cut(s) 407, 595, 639, 720, 1113, 1526, 1544, 1586, 1725
TaiI ACGT 2 cut(s) 874, 1138
TaqI TCGA 9 cut(s) 84, 848, 926, 1194, 1267, 1465, 1655, 1727, 1853
TatI WGTACW 1 cut(s) 1475
TauI GCSGC 7 cut(s) 146, 149, 152, 155, 158, 177, 1488
TfiI GAWTC 5 cut(s) 261, 329, 1633, 1748, 1789
Tru1I TTAA 3 cut(s) 995, 1530, 1581
Tru9I TTAA 3 cut(s) 995, 1530, 1581
TscAI CASTG 1 cut(s) 1591
TseI GCWGC 8 cut(s) 109, 112, 547, 828, 1232, 1274, 1390, 1516
TspGWI ACGGA 1 cut(s) 1394
TspRI CASTG 1 cut(s) 1591
Tth111I GACNNNGTC 1 cut(s) 295
Van91I CCANNNNNTGG 1 cut(s) 1216
VneI GTGCAC 1 cut(s) 1911
VpaK11BI GGWCC 6 cut(s) 440, 878, 959, 1286, 1352, 1891
XapI RAATTY 6 cut(s) 754, 1064, 1550, 1624, 1770, 1904
XceI RCATGY 2 cut(s) 1699, 1951
XmiI GTMKAC 1 cut(s) 1122
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 138
Zsp2I ATGCAT 1 cut(s) 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.