Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008190

Physical Location & Seq

Genomic Coordinates Reverse (-)

10989382 .. 10994439

Gene Structure 5058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00227080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGTGGTCATGGATAATGGCATTCTCCAAGTCAATCTTTCAAAACCAGAGGGGATGGTTACTGGAATACAATATAAAGGCATCGACAATCTGCTTGAAGTTCTTGAAGATGAAACCAATAGAGGGTACTGGGATATGGTTTGGTCTGCACCAGGAATTACGAGAAAGAAAGGCGCATTTGATAGGATGGAAGGAACAAATTTTACGGTTATAGTGGAAACTGAGGATCAGATAGAGCTTTCATTCACCAGAATGTGGGATCCCTCTTTAGAGGGCAAAGTTGTCCCTTTAAACATAGACAAAAGGTTCGTGTTGCTTCGTAACTCGTCGGGTTTCTACACTTACGCCGTTTATGAACACTTGAAGGAATGGCCTGCTTTCAACTTGACCAACACCAGGACTGTGTTTAAGCTCAGAAAAGACAAGTTTCATTACATGGCAATATCAGACAGCAGGCAAAGACACATGCCTCTTCCCGATGATCGATCAGAAAAAAGAGGGCAAGCCCTGGCTTACCCGGAGGCGGTCTTGCTCGTCAATCCGGTCGAGCCAGAGTTCAAAGGAGAGGTGGATGACAAATATCAATATTCGATTGAGAACATACATAATCGGGTGCATGGATGGATAGCAAATGACTCACAGGTTGGATTTTGGCAGATTACTCCCAGTGAAGAGTTTAAATCTGGAGGTCCCTTCAAGCAGTGCCTTACTTCACATGTGGGACCCATCACCCTTGCCATCTTTCATAGTACCCATTACTCCGGAGAGGAACTGATATTACAATTTGGGTCCAATGAGCCATGGAAGAAAGTGTTTGGCCCAGTTTTTTTCTATCTTAATTCTTTGGTTGATGGAGCTAACCCTTTCCAGTGTCTATGGGAGGATGCTAAGCAACAGATGAACGGTGAAGTTGAAAGGTGGCCATATGATTTTCCAGCTTCAAAGGACTTTCTGTCGCCTAAGCAACGAGGAACAATTAGCGGCAAACTATTGGTCCGCGAAAGGTATGTTACGGATGATAAAGACGTACCGGGAAATGGAACTCTGGTAGGATTGGCAGCTCCAGGAGTTGTTGGATCATGGCAGTTAGAATGCAAGGGTTACCAATTCTGGGCCAAAGCAGACAATAATGGCTACTTCTCTATTCATGGCGTACGCCCAGGGACCTATAATCTTTATGCATGGGTTCCTGGTTTTATTGGTGATTACCGATATGTTTCTGAAATTGTTGTAACTCCAGCAGATGGTGATGTTGATGTGGGTACACTTGTATATGAGCCTCCGCGAACTGGCCCAACTCTGTGGGAAATAGGCGTCCCCGATCGAACTGCAACAGAATTTTACGTCCCAGATCCTAATCCAAAGTACATTAACAAGCTCTACGTCAACACTGACAGGTTTGTTGCACTTGTTGGTAATTATCTTCTTAATGATTGGAAAAGGTATGTTATGAAACTTATGCATGTGCTTATTATGATCGATAGGTTTAGACAATATGGATTGTGGGAAAGATATGCAGAGTTATATCCTGACAATGACTTGGTTTACACAATTGGAGTTAGCGATTATGAAAAAGATTTCTTCTTTGCTCAGGTTACCAGGAAGACAGGTAATAACACATACAAAGGATCAACATGGCAGATTAGGTTTAACCTAGACAATGTGGACAAGAACACTACCTACAAACTACGACTATCACTTGCAACAGCACATGTTTCTGAATTACAAGTTCGGATCAATGACCCCGATACAGAGAATCCTCCTCTATTTACTACCGGACAGATTGGGAACGACAACACGATCGCGAGGCATGGAATTCATGGACTGTACAGACTATTCAATGTGGTCATTCCAAGTGCTCAGCTAGTCGAAGGGAACAATACCATATTTCTAACTCGAGGACTGAGTGTCAGCCCCTTTCAGGGAATCATGTATGATTATATTCGTTTAGAAGGCCCCCAATCTTCTAATGACAACAATAACATTGGATTTAGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

666

Amino Acids

76.17

Weight (kDa)

5.52

Isoelectric Point (pI)

30.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	2 - 190	4.2e-91	Rhamnogalacturonate lyase family
fn3_3	PF14686	346 - 413	2.7e-24	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	433 - 650	2e-49	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008190)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34130
malus_domestica	MD15G1389100.v1.1
prunus_persica	Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1
pyrus_communis	pycom15g34880 pycom15g34890
rosa_chinensis	RchiOBHm_Chr7g0233701
rosa_laevigata	RLG00000001241
rosa_multiflora	Rmu_co7977656.1_g000001 Rmu_sc0000556.1_g000027 Rmu_sc0005305.1_g000002 Rmu_sc0005305.1_g000003
rosa_roxburghii	Rroxscaffold_3G00227080
rosa_rugosa	Rorug07G0282100 Rorug07G0282200 Rorug07G0282200
rosa_samantha	Rh7AG438500 Rh7BG411200 Rh7CG458100 Rh7DG427500
rosa_wichuraiana	Rw7G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	255, 1244
AccII	CGCG	3 cut(s)	999, 1285, 1805
AccIII	TCCGGA	1 cut(s)	761
AciI	CCGC	4 cut(s)	524, 981, 997, 1283
AclWI	GGATC	7 cut(s)	234, 254, 267, 1084, 1346, 1636, 1742
AcoI	YGGCCR	1 cut(s)	920
AcsI	RAATTY	3 cut(s)	199, 1337, 1815
AcyI	GRCGYC	1 cut(s)	1314
AfaI	GTAC	7 cut(s)	128, 751, 1029, 1155, 1264, 1367, 1829
AflIII	ACRYGT	2 cut(s)	715, 1711
AhdI	GACNNNNNGTC	2 cut(s)	952, 1907
AjnI	CCWGG	7 cut(s)	151, 395, 507, 1063, 1159, 1189, 1598
AluBI	AGCT	7 cut(s)	238, 412, 857, 938, 1061, 1378, 1864
AluI	AGCT	7 cut(s)	238, 412, 857, 938, 1061, 1378, 1864
Alw21I	GWGCWC	1 cut(s)	1861
AlwI	GGATC	7 cut(s)	234, 254, 267, 1084, 1346, 1636, 1742
Ama87I	CYCGRG	1 cut(s)	1896
Aor13HI	TCCGGA	1 cut(s)	761
AoxI	GGCC	6 cut(s)	371, 817, 920, 1113, 1291, 1954
ApeKI	GCWGC	1 cut(s)	1058
ApoI	RAATTY	3 cut(s)	199, 1337, 1815
ArsI	GACNNNNNNTTYG	4 cut(s)	290, 322, 978, 1010
AspLEI	GCGC	1 cut(s)	176
AspS9I	GGNCC	9 cut(s)	689, 722, 789, 818, 994, 1113, 1164, 1292, 1955
AsuC2I	CCSGG	2 cut(s)	518, 1032
AsuHPI	GGTGA	5 cut(s)	238, 721, 917, 1214, 1259
AvaI	CYCGRG	1 cut(s)	1896
AvaII	GGWCC	5 cut(s)	689, 722, 789, 994, 1164
BaeI	ACNNNNGTAYC	2 cut(s)	1254, 1287
BalI	TGGCCA	1 cut(s)	922
BamHI	GGATCC	1 cut(s)	259
BbsI	GAAGAC	1 cut(s)	1610
Bbv12I	GWGCWC	1 cut(s)	1861
BbvI	GCAGC	1 cut(s)	1070
BccI	CCATC	7 cut(s)	49, 181, 615, 734, 746, 845, 1238
BceAI	ACGGC	1 cut(s)	332
BcgI	CGANNNNNNTGC	2 cut(s)	1310, 1344
BciT130I	CCWGG	7 cut(s)	153, 397, 509, 1065, 1161, 1191, 1600
BcnI	CCSGG	2 cut(s)	518, 1032
BfaI	CTAG	2 cut(s)	1655, 1865
BisI	GCNGC	2 cut(s)	982, 1059
BlpI	GCTNAGC	2 cut(s)	888, 1860
BlsI	GCNGC	2 cut(s)	983, 1060
Bme1390I	CCNGG	9 cut(s)	153, 397, 509, 518, 1032, 1065, 1161, 1191, 1600
Bme18I	GGWCC	5 cut(s)	689, 722, 789, 994, 1164
BmeRI	GACNNNNNGTC	2 cut(s)	952, 1907
BmeT110I	CYCGRG	1 cut(s)	1896
BmgT120I	GGNCC	9 cut(s)	689, 722, 789, 818, 994, 1113, 1164, 1292, 1955
BmiI	GGNNCC	8 cut(s)	261, 691, 723, 724, 790, 1165, 1188, 1957
BmrFI	CCNGG	9 cut(s)	153, 397, 509, 518, 1032, 1065, 1161, 1191, 1600
BmrI	ACTGGG	3 cut(s)	139, 660, 815
BmsI	GCATC	2 cut(s)	90, 874
BmuI	ACTGGG	3 cut(s)	139, 660, 815
BpiI	GAAGAC	1 cut(s)	1610
BpmI	CTGGAG	3 cut(s)	705, 1047, 1221
Bpu10I	CCTNAGC	2 cut(s)	960, 1590
Bpu1102I	GCTNAGC	2 cut(s)	888, 1860
BpuMI	CCSGG	2 cut(s)	518, 1032
Bsa29I	ATCGAT	2 cut(s)	484, 1479
BsaBI	GATNNNNATC	1 cut(s)	1356
BsaHI	GRCGYC	1 cut(s)	1314
BsaJI	CCNNGG	4 cut(s)	507, 800, 1159, 1160
BsaWI	WCCGGW	3 cut(s)	541, 761, 1775
Bse1I	ACTGG	6 cut(s)	67, 134, 666, 821, 868, 1294
Bse8I	GATNNNNATC	1 cut(s)	1356
BseAI	TCCGGA	1 cut(s)	761
BseBI	CCWGG	7 cut(s)	153, 397, 509, 1065, 1161, 1191, 1600
BseCI	ATCGAT	2 cut(s)	484, 1479
BseDI	CCNNGG	4 cut(s)	507, 800, 1159, 1160
BseGI	GGATG	6 cut(s)	60, 192, 577, 626, 889, 1021
BseJI	GATNNNNATC	1 cut(s)	1356
BseMII	CTCAG	5 cut(s)	213, 427, 1604, 1874, 1895
BseNI	ACTGG	6 cut(s)	67, 134, 666, 821, 868, 1294
BseRI	GAGGAG	1 cut(s)	1752
BseXI	GCAGC	1 cut(s)	1070
BsgI	GTGCAG	1 cut(s)	132
Bsh1236I	CGCG	3 cut(s)	999, 1285, 1805
Bsh1285I	CGRYCG	3 cut(s)	546, 1324, 1803
BshFI	GGCC	6 cut(s)	373, 819, 922, 1115, 1293, 1956
BshVI	ATCGAT	2 cut(s)	484, 1479
BsiEI	CGRYCG	3 cut(s)	546, 1324, 1803
BsiHKAI	GWGCWC	1 cut(s)	1861
BsiHKCI	CYCGRG	1 cut(s)	1896
BsiSI	CCGG	5 cut(s)	518, 542, 762, 1031, 1776
BsiWI	CGTACG	1 cut(s)	1153
BslFI	GGGAC	6 cut(s)	269, 675, 735, 1177, 1301, 1331
BsmFI	GGGAC	6 cut(s)	269, 675, 735, 1177, 1301, 1331
BsmI	GAATGC	2 cut(s)	21, 1097
BsnI	GGCC	6 cut(s)	373, 819, 922, 1115, 1293, 1956
BsoBI	CYCGRG	1 cut(s)	1896
Bsp1286I	GDGCHC	1 cut(s)	1861
Bsp13I	TCCGGA	1 cut(s)	761
Bsp1407I	TGTACA	1 cut(s)	1827
Bsp1720I	GCTNAGC	2 cut(s)	888, 1860
Bsp19I	CCATGG	1 cut(s)	800
Bsp68I	TCGCGA	1 cut(s)	1805
BspACI	CCGC	4 cut(s)	524, 981, 997, 1283
BspANI	GGCC	6 cut(s)	373, 819, 922, 1115, 1293, 1956
BspCNI	CTCAG	5 cut(s)	214, 426, 1603, 1873, 1896
BspDI	ATCGAT	2 cut(s)	484, 1479
BspEI	TCCGGA	1 cut(s)	761
BspFNI	CGCG	3 cut(s)	999, 1285, 1805
BspLI	GGNNCC	8 cut(s)	261, 691, 723, 724, 790, 1165, 1188, 1957
BspPI	GGATC	7 cut(s)	234, 254, 267, 1084, 1346, 1636, 1742
BsrGI	TGTACA	1 cut(s)	1827
BsrI	ACTGG	6 cut(s)	67, 134, 666, 821, 868, 1294
BssECI	CCNNGG	4 cut(s)	507, 800, 1159, 1160
BssNI	GRCGYC	1 cut(s)	1314
BssT1I	CCWWGG	1 cut(s)	800
Bst2UI	CCWGG	7 cut(s)	153, 397, 509, 1065, 1161, 1191, 1600
Bst4CI	ACNGT	4 cut(s)	208, 403, 905, 1827
Bst6I	CTCTTC	2 cut(s)	477, 666
BstACI	GRCGYC	1 cut(s)	1314
BstAUI	TGTACA	1 cut(s)	1827
BstC8I	GCNNGC	3 cut(s)	375, 455, 504
BstDEI	CTNAG	7 cut(s)	222, 413, 888, 960, 1590, 1860, 1904
BstDSI	CCRYGG	1 cut(s)	800
BstEII	GGTNACC	2 cut(s)	1100, 1594
BstF5I	GGATG	6 cut(s)	60, 192, 577, 626, 889, 1021
BstFNI	CGCG	3 cut(s)	999, 1285, 1805
BstHHI	GCGC	1 cut(s)	176
BstMCI	CGRYCG	3 cut(s)	546, 1324, 1803
BstNI	CCWGG	7 cut(s)	153, 397, 509, 1065, 1161, 1191, 1600
BstNSI	RCATGY	4 cut(s)	469, 719, 1466, 1715
BstPI	GGTNACC	2 cut(s)	1100, 1594
BstSCI	CCNGG	9 cut(s)	151, 395, 507, 516, 1030, 1063, 1159, 1189, 1598
BstUI	CGCG	3 cut(s)	999, 1285, 1805
BstV1I	GCAGC	1 cut(s)	1070
BstV2I	GAAGAC	1 cut(s)	1610
BstX2I	RGATCY	2 cut(s)	259, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstYI	RGATCY	2 cut(s)	259, 1351
Bsu15I	ATCGAT	2 cut(s)	484, 1479
BsuRI	GGCC	6 cut(s)	373, 819, 922, 1115, 1293, 1956
BsuTUI	ATCGAT	2 cut(s)	484, 1479
BtgI	CCRYGG	1 cut(s)	800
BtsCI	GGATG	6 cut(s)	60, 192, 577, 626, 889, 1021
BtsI	GCAGTG	1 cut(s)	707
BtsIMutI	CAGTG	4 cut(s)	673, 707, 875, 1389
BtuMI	TCGCGA	1 cut(s)	1805
Cac8I	GCNNGC	3 cut(s)	375, 455, 504
CfoI	GCGC	1 cut(s)	176
Cfr13I	GGNCC	9 cut(s)	689, 722, 789, 818, 994, 1113, 1164, 1292, 1955
ClaI	ATCGAT	2 cut(s)	484, 1479
CseI	GACGC	1 cut(s)	1303
Csp6I	GTAC	7 cut(s)	127, 750, 1028, 1154, 1263, 1366, 1828
CviQI	GTAC	7 cut(s)	127, 750, 1028, 1154, 1263, 1366, 1828
DdeI	CTNAG	7 cut(s)	222, 413, 888, 960, 1590, 1860, 1904
DraI	TTTAAA	2 cut(s)	291, 679
DriI	GACNNNNNGTC	2 cut(s)	952, 1907
EaeI	YGGCCR	1 cut(s)	920
Eam1104I	CTCTTC	2 cut(s)	477, 666
Eam1105I	GACNNNNNGTC	2 cut(s)	952, 1907
EarI	CTCTTC	2 cut(s)	477, 666
Eco130I	CCWWGG	1 cut(s)	800
Eco47I	GGWCC	5 cut(s)	689, 722, 789, 994, 1164
Eco88I	CYCGRG	1 cut(s)	1896
Eco91I	GGTNACC	2 cut(s)	1100, 1594
EcoO109I	RGGNCCY	4 cut(s)	689, 722, 1164, 1955
EcoO65I	GGTNACC	2 cut(s)	1100, 1594
EcoRI	GAATTC	1 cut(s)	1815
EcoRII	CCWGG	7 cut(s)	151, 395, 507, 1063, 1159, 1189, 1598
EcoT14I	CCWWGG	1 cut(s)	800
EcoT22I	ATGCAT	2 cut(s)	1183, 1464
ErhI	CCWWGG	1 cut(s)	800
FalI	AAGNNNNNCTT	2 cut(s)	21, 53
FaqI	GGGAC	6 cut(s)	269, 675, 735, 1177, 1301, 1331
FauNDI	CATATG	1 cut(s)	925
Fnu4HI	GCNGC	2 cut(s)	982, 1059
FokI	GGATG	6 cut(s)	67, 199, 584, 633, 896, 1028
Fsp4HI	GCNGC	2 cut(s)	982, 1059
FspBI	CTAG	2 cut(s)	1655, 1865
GlaI	GCGC	1 cut(s)	175
GluI	GCNGC	2 cut(s)	982, 1059
GsuI	CTGGAG	3 cut(s)	705, 1047, 1221
HaeIII	GGCC	6 cut(s)	373, 819, 922, 1115, 1293, 1956
HapII	CCGG	5 cut(s)	518, 542, 762, 1031, 1776
HgaI	GACGC	1 cut(s)	1303
HhaI	GCGC	1 cut(s)	176
Hin1I	GRCGYC	1 cut(s)	1314
Hin6I	GCGC	1 cut(s)	174
HinP1I	GCGC	1 cut(s)	174
HincII	GTYRAC	1 cut(s)	1387
HindII	GTYRAC	1 cut(s)	1387
HinfI	GANTC	3 cut(s)	635, 1756, 1926
HpaII	CCGG	5 cut(s)	518, 542, 762, 1031, 1776
HphI	GGTGA	5 cut(s)	238, 721, 917, 1214, 1259
Hpy166II	GTNNAC	4 cut(s)	1265, 1387, 1546, 1666
Hpy188I	TCNGA	7 cut(s)	231, 416, 448, 490, 1222, 1720, 1734
Hpy188III	TCNNGA	6 cut(s)	104, 476, 684, 762, 1529, 1804
Hpy8I	GTNNAC	4 cut(s)	1265, 1387, 1546, 1666
Hpy99I	CGWCG	1 cut(s)	331
HpyAV	CCTTC	5 cut(s)	185, 358, 703, 1865, 1946
HpyCH4III	ACNGT	4 cut(s)	208, 403, 905, 1827
HpyCH4IV	ACGT	3 cut(s)	1026, 1344, 1383
HpyCH4V	TGCA	9 cut(s)	149, 616, 1095, 1181, 1331, 1406, 1462, 1517, 1703
HpyF3I	CTNAG	7 cut(s)	222, 413, 888, 960, 1590, 1860, 1904
HpySE526I	ACGT	3 cut(s)	1026, 1344, 1383
Hsp92I	GRCGYC	1 cut(s)	1314
HspAI	GCGC	1 cut(s)	174
KflI	GGGWCCC	1 cut(s)	722
Kpn2I	TCCGGA	1 cut(s)	761
LmnI	GCTCC	2 cut(s)	854, 1066
Lsp1109I	GCAGC	1 cut(s)	1070
LweI	GCATC	2 cut(s)	90, 874
MaeI	CTAG	2 cut(s)	1655, 1865
MaeII	ACGT	3 cut(s)	1026, 1344, 1383
MaeIII	GTNAC	6 cut(s)	58, 320, 1009, 1100, 1231, 1594
MboII	GAAGA	8 cut(s)	119, 464, 683, 817, 1415, 1573, 1615, 1956
MfeI	CAATTG	1 cut(s)	1551
MflI	RGATCY	2 cut(s)	259, 1351
MhlI	GDGCHC	1 cut(s)	1861
MlsI	TGGCCA	1 cut(s)	922
MluNI	TGGCCA	1 cut(s)	922
MlyI	GAGTC	1 cut(s)	629
MmeI	TCCRAC	2 cut(s)	625, 1054
Mox20I	TGGCCA	1 cut(s)	922
Mph1103I	ATGCAT	2 cut(s)	1183, 1464
MroI	TCCGGA	1 cut(s)	761
MscI	TGGCCA	1 cut(s)	922
MseI	TTAA	7 cut(s)	290, 408, 678, 837, 1371, 1428, 1650
MslI	CAYNNNNRTG	1 cut(s)	251
Msp20I	TGGCCA	1 cut(s)	922
MspI	CCGG	5 cut(s)	518, 542, 762, 1031, 1776
MspR9I	CCNGG	9 cut(s)	153, 397, 509, 518, 1032, 1065, 1161, 1191, 1600
MunI	CAATTG	1 cut(s)	1551
Mva1269I	GAATGC	2 cut(s)	21, 1097
MvaI	CCWGG	7 cut(s)	153, 397, 509, 1065, 1161, 1191, 1600
MvnI	CGCG	3 cut(s)	999, 1285, 1805
NciI	CCSGG	2 cut(s)	518, 1032
NcoI	CCATGG	1 cut(s)	800
NdeI	CATATG	1 cut(s)	925
NlaIV	GGNNCC	8 cut(s)	261, 691, 723, 724, 790, 1165, 1188, 1957
NruI	TCGCGA	1 cut(s)	1805
NsiI	ATGCAT	2 cut(s)	1183, 1464
NspI	RCATGY	4 cut(s)	469, 719, 1466, 1715
PaeR7I	CTCGAG	1 cut(s)	1896
PasI	CCCWGGG	1 cut(s)	1160
PciI	ACATGT	2 cut(s)	715, 1711
PctI	GAATGC	2 cut(s)	21, 1097
PfeI	GAWTC	2 cut(s)	1756, 1926
Pfl23II	CGTACG	1 cut(s)	1153
PflMI	CCANNNNNTGG	2 cut(s)	255, 1244
PfoI	TCCNGGA	1 cut(s)	1063
PkrI	GCNGC	2 cut(s)	983, 1060
Ple19I	CGATCG	2 cut(s)	1324, 1803
PleI	GAGTC	1 cut(s)	629
PpsI	GAGTC	1 cut(s)	629
PpuMI	RGGWCCY	3 cut(s)	689, 722, 1164
PscI	ACATGT	2 cut(s)	715, 1711
Psp5II	RGGWCCY	3 cut(s)	689, 722, 1164
Psp6I	CCWGG	7 cut(s)	151, 395, 507, 1063, 1159, 1189, 1598
PspEI	GGTNACC	2 cut(s)	1100, 1594
PspGI	CCWGG	7 cut(s)	151, 395, 507, 1063, 1159, 1189, 1598
PspLI	CGTACG	1 cut(s)	1153
PspN4I	GGNNCC	8 cut(s)	261, 691, 723, 724, 790, 1165, 1188, 1957
PspPI	GGNCC	9 cut(s)	689, 722, 789, 818, 994, 1113, 1164, 1292, 1955
PspPPI	RGGWCCY	3 cut(s)	689, 722, 1164
PspXI	VCTCGAGB	1 cut(s)	1896
PsrI	GAACNNNNNNTAC	6 cut(s)	187, 219, 762, 794, 1664, 1696
PsuI	RGATCY	2 cut(s)	259, 1351
PvuI	CGATCG	2 cut(s)	1324, 1803
RruI	TCGCGA	1 cut(s)	1805
RsaI	GTAC	7 cut(s)	128, 751, 1029, 1155, 1264, 1367, 1829
RsaNI	GTAC	7 cut(s)	127, 750, 1028, 1154, 1263, 1366, 1828
RseI	CAYNNNNRTG	1 cut(s)	251
SaqAI	TTAA	7 cut(s)	290, 408, 678, 837, 1371, 1428, 1650
SatI	GCNGC	2 cut(s)	982, 1059
Sau96I	GGNCC	9 cut(s)	689, 722, 789, 818, 994, 1113, 1164, 1292, 1955
SchI	GAGTC	1 cut(s)	629
ScrFI	CCNGG	9 cut(s)	153, 397, 509, 518, 1032, 1065, 1161, 1191, 1600
SduI	GDGCHC	1 cut(s)	1861
SfaNI	GCATC	2 cut(s)	90, 874
Sfr274I	CTCGAG	1 cut(s)	1896
SinI	GGWCC	5 cut(s)	689, 722, 789, 994, 1164
SlaI	CTCGAG	1 cut(s)	1896
SmiMI	CAYNNNNRTG	1 cut(s)	251
SmlI	CTYRAG	1 cut(s)	1896
SmoI	CTYRAG	1 cut(s)	1896
SsiI	CCGC	4 cut(s)	524, 981, 997, 1283
SspI	AATATT	1 cut(s)	587
SspMI	CTAG	2 cut(s)	1655, 1865
StyD4I	CCNGG	9 cut(s)	151, 395, 507, 516, 1030, 1063, 1159, 1189, 1598
StyI	CCWWGG	1 cut(s)	800
TaaI	ACNGT	4 cut(s)	208, 403, 905, 1827
TaiI	ACGT	3 cut(s)	1029, 1347, 1386
TaqI	TCGA	8 cut(s)	84, 484, 546, 590, 1324, 1479, 1869, 1897
TatI	WGTACW	2 cut(s)	1365, 1827
TauI	GCSGC	1 cut(s)	984
TfiI	GAWTC	2 cut(s)	1756, 1926
Tru1I	TTAA	7 cut(s)	290, 408, 678, 837, 1371, 1428, 1650
Tru9I	TTAA	7 cut(s)	290, 408, 678, 837, 1371, 1428, 1650
TscAI	CASTG	4 cut(s)	673, 707, 875, 1396
TseI	GCWGC	1 cut(s)	1058
TspGWI	ACGGA	1 cut(s)	1028
TspRI	CASTG	4 cut(s)	673, 707, 875, 1396
Van91I	CCANNNNNTGG	2 cut(s)	255, 1244
VpaK11BI	GGWCC	5 cut(s)	689, 722, 789, 994, 1164
XapI	RAATTY	3 cut(s)	199, 1337, 1815
XceI	RCATGY	4 cut(s)	469, 719, 1466, 1715
XhoI	CTCGAG	1 cut(s)	1896
XspI	CTAG	2 cut(s)	1655, 1865
Zsp2I	ATGCAT	2 cut(s)	1183, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.