Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008190

Physical Location & Seq

Genomic Coordinates Forward (+)

59122611 .. 59128280

Gene Structure 5670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG438500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGTCGACCTTTCCTGTTGGATTAGGCAAAGGAGCAATCCGCACCATTTTTTCGCTTTCCACAATAACATGGATTTCGGCAAAGTTGGGTACCATGATTCTCCTCCTCTTCTCCAGCCAGACATTTCTGGATGAAGATATATTCATCCAAGCCACTGCTTCAGAAAATACAACAGGCCTGCAACTGCATATCTTCAATCAATATGTGGTCATGGATAATGGCATTCTCCAAGTCAATCTTTCAAAACCAGAGGGGATGGTTACTGGAATACAATATAAAGGCATCGACAATCTGCTTGAAGTTCTTGAAGATGAAACCAATAGAGGGTACTGGGATATGGTTTGGTCTGCACCAGGAATTACGAGAAAGAAAGGCGCATTTGATAGGATGGAAGGAACAAATTTTACGGTTATAGTGGAAACTGAGGATCAGATAGAGCTTTCATTCACCAGAATGTGGGATCCCTCTTTAGAGGGCAAAGTTGTCCCTTTAAACATAGACAAAAGGTTCGTGTTGCTTCGTAACTCGTCGGGTTTCTACACTTACGCCATTTATGAACACTTGAAGGAATGGCCTGCTTTCAACTTGACCAACACCAGGACTGTGTTTAAGCTCAGAAAAGACAAGTTTCATTACATGGCAATATCAGACAGCAGGCAAAGACACATGCCCCTTCCCGATGATCGATCAGAAAAAAGAGGGCAAGCCCTGGCTTACCCGGAGGCGGTCTTGCTCGTCAATCCGGTCGAGCCAGAATTCAAAGGAGAGGTGGATGACAAATATCAATATTCGATTGAGAACATACATAATCGGGTGCATGGATGGATAGCAAATGACTCACAGGTTGGATTTTGGCAGATTACTCCCAGCGAAGAGTTTAAATCTGGAGGTCCCTTCAAGCAGTGCCTTACTTCACATGTGGGACCCATCACCGTTGCCATCTTTCATAGTACCCATTACTCAGGAGAGGAACTGATATTACAATTTGGGTCCAATGAGCCATGGAAGAAAGTGTTTGGCCCAGTTTTTTTCTATCTTAATTCTTTGGTTGATGGAGCTAACCCTTTCCAGTGTCTATGGGAGGATGCTAAGCAACAGATGAACGATGAAGTTGAAAGGTGGCCATATGATTTTCCAGCTTCAAAGGACTTTCTGTCGCCTAAGCAACGAGGAACAGTTAGCGGCAGACTATTGGTCCGCGAAAGGTATGTTACGGATGATAAAGACGTACCGGGAAATGGAACTCTGGTAGGCTTGGCAGCTCCAGGAGTTGTTGGATCATGGCAGTTAGAATGCAAGGGTTACCAATTCTGGACCAAAGCTGATAATGATGGCTACTTCTCTATTCACGGCGTACGCCCAGGGACCTATAATCTTTATGCATGGGTTCCTGGTTTTATTGGTGATTACCGAGATGTTTCTGAAATTGTTGTAACTCCAGATGGTGATGTTGATGTGGGTACACTTGTATATGAGCCTCCGCGAACTGGCCCAACTCTGTGGGAAATAGGCGTCCCCGATCGAACTGCAGCAGAATTTTACGTCCCAGATCCTAATCCAAAGTACATTAACAAACTCTACGTCAACACTGACAGGTTTAGACAATATGGATTGTGGGAAAGATATGCAGAGTTATATCCTGACAATGACTTGGTTTACACAATTGGAGTTAGCGATTATAGAAAGGATTTCTTCTTTGCTCAGGTTACCAGGATGACAGGTAATAACACATACAAAGGATCAACATGGCAGATTAGGTTTAACCTAGACAACGTGGACAAGAACACTACCTACAAACTACGAGTATCACTTGCAACAGCACATGTTTCTGAATTACAAGTTCGGATCAATGACCCCGATACAGAGAATGATCCTCTATTTACTACCGGACAGATTGGGAACGACAACACGATCGCGAGGCATGGAATTCATGGACTGTACAGGCTATACAATGTGGTCATTCCAAGCGCTCAGCTAGTCGCCGGGAACAATACCATATTTCTAACTCGAGAATTGAGTGTCAGCCCCTTTCAGGGAATCATGTATGATTATATTCGTTTAGAAGGCCCCCAATCTTCTAATGACAACAATAATATTGGATTTAGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

703

Amino Acids

80.0

Weight (kDa)

5.21

Isoelectric Point (pI)

31.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	53 - 257	1e-93	Rhamnogalacturonate lyase family
fn3_3	PF14686	413 - 482	7.3e-25	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	499 - 687	2.5e-51	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008190)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34130
malus_domestica	MD15G1389100.v1.1
prunus_persica	Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1 Prupe.1G537300_v2.0.a1
pyrus_communis	pycom15g34880 pycom15g34890
rosa_chinensis	RchiOBHm_Chr7g0233701
rosa_laevigata	RLG00000001241
rosa_multiflora	Rmu_co7977656.1_g000001 Rmu_sc0000556.1_g000027 Rmu_sc0005305.1_g000002 Rmu_sc0005305.1_g000003
rosa_roxburghii	Rroxscaffold_3G00227080
rosa_rugosa	Rorug07G0282100 Rorug07G0282200 Rorug07G0282200
rosa_samantha	Rh7AG438500 Rh7BG411200 Rh7CG458100 Rh7DG427500
rosa_wichuraiana	Rw7G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	89
AccB1I	GGYRCC	1 cut(s)	89
AccB7I	CCANNNNNTGG	1 cut(s)	456
AccI	GTMKAC	1 cut(s)	5
AccII	CGCG	3 cut(s)	1200, 1483, 1916
AciI	CCGC	5 cut(s)	40, 725, 1182, 1198, 1481
AclWI	GGATC	8 cut(s)	435, 455, 468, 1285, 1544, 1747, 1853, 1865
AcoI	YGGCCR	1 cut(s)	1121
AcsI	RAATTY	4 cut(s)	400, 755, 1535, 1926
AcuI	CTGAAG	1 cut(s)	144
AcyI	GRCGYC	1 cut(s)	1512
AfaI	GTAC	8 cut(s)	91, 329, 952, 1230, 1356, 1462, 1565, 1940
AfeI	AGCGCT	1 cut(s)	1969
AfiI	CCNNNNNNNGG	8 cut(s)	324, 456, 597, 724, 1238, 1487, 2032, 2033
AflIII	ACRYGT	2 cut(s)	916, 1822
AhdI	GACNNNNNGTC	2 cut(s)	1153, 1193
AjnI	CCWGG	7 cut(s)	352, 596, 708, 1264, 1360, 1390, 1709
AluBI	AGCT	7 cut(s)	439, 613, 1058, 1139, 1262, 1322, 1975
AluI	AGCT	7 cut(s)	439, 613, 1058, 1139, 1262, 1322, 1975
AlwI	GGATC	8 cut(s)	435, 455, 468, 1285, 1544, 1747, 1853, 1865
Ama87I	CYCGRG	1 cut(s)	2007
Aor51HI	AGCGCT	1 cut(s)	1969
AoxI	GGCC	6 cut(s)	175, 572, 1018, 1121, 1489, 2065
ApeKI	GCWGC	2 cut(s)	1259, 1529
ApoI	RAATTY	4 cut(s)	400, 755, 1535, 1926
ArsI	GACNNNNNNTTYG	4 cut(s)	491, 523, 1566, 1598
Asp718I	GGTACC	1 cut(s)	89
AspLEI	GCGC	2 cut(s)	377, 1970
AspS9I	GGNCC	9 cut(s)	890, 923, 990, 1019, 1195, 1314, 1365, 1490, 2066
AsuC2I	CCSGG	3 cut(s)	719, 1233, 1984
AsuHPI	GGTGA	4 cut(s)	439, 922, 1415, 1457
AvaI	CYCGRG	1 cut(s)	2007
AvaII	GGWCC	6 cut(s)	890, 923, 990, 1195, 1314, 1365
BaeI	ACNNNNGTAYC	2 cut(s)	1452, 1485
BalI	TGGCCA	1 cut(s)	1123
BamHI	GGATCC	1 cut(s)	460
BanI	GGYRCC	1 cut(s)	89
BbvI	GCAGC	2 cut(s)	1271, 1541
BccI	CCATC	8 cut(s)	250, 382, 816, 935, 947, 1046, 1325, 1436
BceAI	ACGGC	1 cut(s)	1366
BcgI	CGANNNNNNTGC	2 cut(s)	1508, 1542
BciT130I	CCWGG	7 cut(s)	354, 598, 710, 1266, 1362, 1392, 1711
BcnI	CCSGG	3 cut(s)	719, 1233, 1984
BfaI	CTAG	2 cut(s)	1766, 1976
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	1 cut(s)	1971
BisI	GCNGC	3 cut(s)	1183, 1260, 1530
BlpI	GCTNAGC	2 cut(s)	1089, 1971
BlsI	GCNGC	3 cut(s)	1184, 1261, 1531
Bme18I	GGWCC	6 cut(s)	890, 923, 990, 1195, 1314, 1365
BmeRI	GACNNNNNGTC	2 cut(s)	1153, 1193
BmeT110I	CYCGRG	1 cut(s)	2007
BmgT120I	GGNCC	9 cut(s)	890, 923, 990, 1019, 1195, 1314, 1365, 1490, 2066
BmiI	GGNNCC	9 cut(s)	91, 462, 892, 924, 925, 991, 1366, 1389, 2068
BmrI	ACTGGG	2 cut(s)	340, 1016
BmsI	GCATC	2 cut(s)	291, 1075
BmuI	ACTGGG	2 cut(s)	340, 1016
BpmI	CTGGAG	4 cut(s)	97, 906, 1248, 1422
Bpu10I	CCTNAGC	2 cut(s)	1161, 1701
Bpu1102I	GCTNAGC	2 cut(s)	1089, 1971
BpuMI	CCSGG	3 cut(s)	719, 1233, 1984
Bsa29I	ATCGAT	1 cut(s)	685
BsaBI	GATNNNNATC	1 cut(s)	1554
BsaHI	GRCGYC	1 cut(s)	1512
BsaJI	CCNNGG	4 cut(s)	708, 1001, 1360, 1361
BsaWI	WCCGGW	2 cut(s)	742, 1886
Bsc4I	CCNNNNNNNGG	8 cut(s)	324, 456, 597, 724, 1238, 1487, 2032, 2033
Bse1I	ACTGG	5 cut(s)	268, 335, 1022, 1069, 1492
Bse8I	GATNNNNATC	1 cut(s)	1554
BseBI	CCWGG	7 cut(s)	354, 598, 710, 1266, 1362, 1392, 1711
BseCI	ATCGAT	1 cut(s)	685
BseDI	CCNNGG	4 cut(s)	708, 1001, 1360, 1361
BseGI	GGATG	9 cut(s)	136, 144, 261, 393, 778, 827, 1090, 1222, 1719
BseJI	GATNNNNATC	1 cut(s)	1554
BseLI	CCNNNNNNNGG	8 cut(s)	324, 456, 597, 724, 1238, 1487, 2032, 2033
BseMII	CTCAG	5 cut(s)	414, 628, 975, 1715, 1985
BseNI	ACTGG	5 cut(s)	268, 335, 1022, 1069, 1492
BseRI	GAGGAG	2 cut(s)	92, 95
BseXI	GCAGC	2 cut(s)	1271, 1541
BseYI	CCCAGC	1 cut(s)	866
BsgI	GTGCAG	1 cut(s)	333
Bsh1236I	CGCG	3 cut(s)	1200, 1483, 1916
Bsh1285I	CGRYCG	3 cut(s)	747, 1522, 1914
BshFI	GGCC	6 cut(s)	177, 574, 1020, 1123, 1491, 2067
BshNI	GGYRCC	1 cut(s)	89
BshVI	ATCGAT	1 cut(s)	685
BsiEI	CGRYCG	3 cut(s)	747, 1522, 1914
BsiHKCI	CYCGRG	1 cut(s)	2007
BsiSI	CCGG	5 cut(s)	719, 743, 1232, 1887, 1983
BsiWI	CGTACG	1 cut(s)	1354
BslFI	GGGAC	6 cut(s)	470, 876, 936, 1378, 1499, 1529
BslI	CCNNNNNNNGG	8 cut(s)	324, 456, 597, 724, 1238, 1487, 2032, 2033
BsmFI	GGGAC	6 cut(s)	470, 876, 936, 1378, 1499, 1529
BsmI	GAATGC	2 cut(s)	222, 1298
BsnI	GGCC	6 cut(s)	177, 574, 1020, 1123, 1491, 2067
BsoBI	CYCGRG	1 cut(s)	2007
Bsp1407I	TGTACA	1 cut(s)	1938
Bsp1720I	GCTNAGC	2 cut(s)	1089, 1971
Bsp19I	CCATGG	1 cut(s)	1001
Bsp68I	TCGCGA	1 cut(s)	1916
BspACI	CCGC	5 cut(s)	40, 725, 1182, 1198, 1481
BspANI	GGCC	6 cut(s)	177, 574, 1020, 1123, 1491, 2067
BspCNI	CTCAG	5 cut(s)	415, 627, 974, 1714, 1984
BspDI	ATCGAT	1 cut(s)	685
BspFNI	CGCG	3 cut(s)	1200, 1483, 1916
BspLI	GGNNCC	9 cut(s)	91, 462, 892, 924, 925, 991, 1366, 1389, 2068
BspMAI	CTGCAG	1 cut(s)	1531
BspPI	GGATC	8 cut(s)	435, 455, 468, 1285, 1544, 1747, 1853, 1865
BspT107I	GGYRCC	1 cut(s)	89
BsrGI	TGTACA	1 cut(s)	1938
BsrI	ACTGG	5 cut(s)	268, 335, 1022, 1069, 1492
BssECI	CCNNGG	4 cut(s)	708, 1001, 1360, 1361
BssNI	GRCGYC	1 cut(s)	1512
BssT1I	CCWWGG	1 cut(s)	1001
Bst2UI	CCWGG	7 cut(s)	354, 598, 710, 1266, 1362, 1392, 1711
Bst4CI	ACNGT	5 cut(s)	409, 604, 934, 1177, 1938
Bst6I	CTCTTC	2 cut(s)	113, 867
BstACI	GRCGYC	1 cut(s)	1512
BstAUI	TGTACA	1 cut(s)	1938
BstC8I	GCNNGC	4 cut(s)	179, 576, 656, 705
BstDEI	CTNAG	7 cut(s)	423, 614, 961, 1089, 1161, 1701, 1971
BstDSI	CCRYGG	1 cut(s)	1001
BstEII	GGTNACC	2 cut(s)	1301, 1705
BstF5I	GGATG	9 cut(s)	136, 144, 261, 393, 778, 827, 1090, 1222, 1719
BstFNI	CGCG	3 cut(s)	1200, 1483, 1916
BstH2I	RGCGCY	1 cut(s)	1971
BstHHI	GCGC	2 cut(s)	377, 1970
BstMCI	CGRYCG	3 cut(s)	747, 1522, 1914
BstNI	CCWGG	7 cut(s)	354, 598, 710, 1266, 1362, 1392, 1711
BstNSI	RCATGY	3 cut(s)	670, 920, 1826
BstPI	GGTNACC	2 cut(s)	1301, 1705
BstSFI	CTRYAG	1 cut(s)	1527
BstUI	CGCG	3 cut(s)	1200, 1483, 1916
BstV1I	GCAGC	2 cut(s)	1271, 1541
BstX2I	RGATCY	2 cut(s)	460, 1549
BstXI	CCANNNNNNTGG	1 cut(s)	1500
BstYI	RGATCY	2 cut(s)	460, 1549
Bsu15I	ATCGAT	1 cut(s)	685
BsuRI	GGCC	6 cut(s)	177, 574, 1020, 1123, 1491, 2067
BsuTUI	ATCGAT	1 cut(s)	685
BtgI	CCRYGG	1 cut(s)	1001
BtsCI	GGATG	9 cut(s)	136, 144, 261, 393, 778, 827, 1090, 1222, 1719
BtsI	GCAGTG	2 cut(s)	153, 908
BtsIMutI	CAGTG	4 cut(s)	153, 908, 1076, 1587
BtuMI	TCGCGA	1 cut(s)	1916
Cac8I	GCNNGC	4 cut(s)	179, 576, 656, 705
CfoI	GCGC	2 cut(s)	377, 1970
Cfr13I	GGNCC	9 cut(s)	890, 923, 990, 1019, 1195, 1314, 1365, 1490, 2066
ClaI	ATCGAT	1 cut(s)	685
CseI	GACGC	1 cut(s)	1501
Csp6I	GTAC	8 cut(s)	90, 328, 951, 1229, 1355, 1461, 1564, 1939
CviQI	GTAC	8 cut(s)	90, 328, 951, 1229, 1355, 1461, 1564, 1939
DdeI	CTNAG	7 cut(s)	423, 614, 961, 1089, 1161, 1701, 1971
DraI	TTTAAA	2 cut(s)	492, 880
DriI	GACNNNNNGTC	2 cut(s)	1153, 1193
EaeI	YGGCCR	1 cut(s)	1121
Eam1104I	CTCTTC	2 cut(s)	113, 867
Eam1105I	GACNNNNNGTC	2 cut(s)	1153, 1193
EarI	CTCTTC	2 cut(s)	113, 867
Eco130I	CCWWGG	1 cut(s)	1001
Eco147I	AGGCCT	1 cut(s)	177
Eco47I	GGWCC	6 cut(s)	890, 923, 990, 1195, 1314, 1365
Eco47III	AGCGCT	1 cut(s)	1969
Eco57I	CTGAAG	1 cut(s)	144
Eco88I	CYCGRG	1 cut(s)	2007
Eco91I	GGTNACC	2 cut(s)	1301, 1705
EcoO109I	RGGNCCY	4 cut(s)	890, 923, 1365, 2066
EcoO65I	GGTNACC	2 cut(s)	1301, 1705
EcoRI	GAATTC	2 cut(s)	755, 1926
EcoRII	CCWGG	7 cut(s)	352, 596, 708, 1264, 1360, 1390, 1709
EcoT14I	CCWWGG	1 cut(s)	1001
EcoT22I	ATGCAT	1 cut(s)	1384
ErhI	CCWWGG	1 cut(s)	1001
FalI	AAGNNNNNCTT	4 cut(s)	222, 254, 1676, 1708
FaqI	GGGAC	6 cut(s)	470, 876, 936, 1378, 1499, 1529
FauNDI	CATATG	1 cut(s)	1126
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	3 cut(s)	1183, 1260, 1530
FokI	GGATG	9 cut(s)	131, 143, 268, 400, 785, 834, 1097, 1229, 1726
Fsp4HI	GCNGC	3 cut(s)	1183, 1260, 1530
FspBI	CTAG	2 cut(s)	1766, 1976
GlaI	GCGC	2 cut(s)	376, 1969
GluI	GCNGC	3 cut(s)	1183, 1260, 1530
GsaI	CCCAGC	1 cut(s)	870
GsuI	CTGGAG	4 cut(s)	97, 906, 1248, 1422
HaeII	RGCGCY	1 cut(s)	1971
HaeIII	GGCC	6 cut(s)	177, 574, 1020, 1123, 1491, 2067
HapII	CCGG	5 cut(s)	719, 743, 1232, 1887, 1983
HgaI	GACGC	1 cut(s)	1501
HhaI	GCGC	2 cut(s)	377, 1970
Hin1I	GRCGYC	1 cut(s)	1512
Hin6I	GCGC	2 cut(s)	375, 1968
HinP1I	GCGC	2 cut(s)	375, 1968
HincII	GTYRAC	2 cut(s)	6, 1585
HindII	GTYRAC	2 cut(s)	6, 1585
HinfI	GANTC	3 cut(s)	97, 836, 2037
HpaII	CCGG	5 cut(s)	719, 743, 1232, 1887, 1983
HphI	GGTGA	4 cut(s)	439, 922, 1415, 1457
Hpy166II	GTNNAC	5 cut(s)	6, 1463, 1585, 1657, 1777
Hpy188I	TCNGA	8 cut(s)	163, 432, 617, 649, 691, 1423, 1831, 1845
Hpy8I	GTNNAC	5 cut(s)	6, 1463, 1585, 1657, 1777
Hpy99I	CGWCG	1 cut(s)	532
HpyAV	CCTTC	5 cut(s)	386, 559, 683, 904, 2057
HpyCH4III	ACNGT	5 cut(s)	409, 604, 934, 1177, 1938
HpyCH4IV	ACGT	4 cut(s)	1227, 1542, 1581, 1773
HpyCH4V	TGCA	9 cut(s)	181, 187, 350, 817, 1296, 1382, 1529, 1628, 1814
HpyF3I	CTNAG	7 cut(s)	423, 614, 961, 1089, 1161, 1701, 1971
HpySE526I	ACGT	4 cut(s)	1227, 1542, 1581, 1773
Hsp92I	GRCGYC	1 cut(s)	1512
HspAI	GCGC	2 cut(s)	375, 1968
KflI	GGGWCCC	1 cut(s)	923
KpnI	GGTACC	1 cut(s)	93
LmnI	GCTCC	3 cut(s)	32, 1055, 1267
Lsp1109I	GCAGC	2 cut(s)	1271, 1541
LweI	GCATC	2 cut(s)	291, 1075
MaeI	CTAG	2 cut(s)	1766, 1976
MaeII	ACGT	4 cut(s)	1227, 1542, 1581, 1773
MaeIII	GTNAC	6 cut(s)	259, 521, 1210, 1301, 1432, 1705
MboII	GAAGA	8 cut(s)	100, 146, 184, 320, 884, 1018, 1684, 2067
MfeI	CAATTG	1 cut(s)	1662
MflI	RGATCY	2 cut(s)	460, 1549
MlsI	TGGCCA	1 cut(s)	1123
MluNI	TGGCCA	1 cut(s)	1123
MlyI	GAGTC	1 cut(s)	830
MmeI	TCCRAC	2 cut(s)	826, 1255
Mox20I	TGGCCA	1 cut(s)	1123
Mph1103I	ATGCAT	1 cut(s)	1384
MscI	TGGCCA	1 cut(s)	1123
MseI	TTAA	6 cut(s)	491, 609, 879, 1038, 1569, 1761
MslI	CAYNNNNRTG	1 cut(s)	452
Msp20I	TGGCCA	1 cut(s)	1123
MspI	CCGG	5 cut(s)	719, 743, 1232, 1887, 1983
MunI	CAATTG	1 cut(s)	1662
Mva1269I	GAATGC	2 cut(s)	222, 1298
MvaI	CCWGG	7 cut(s)	354, 598, 710, 1266, 1362, 1392, 1711
MvnI	CGCG	3 cut(s)	1200, 1483, 1916
NciI	CCSGG	3 cut(s)	719, 1233, 1984
NcoI	CCATGG	1 cut(s)	1001
NdeI	CATATG	1 cut(s)	1126
NlaIV	GGNNCC	9 cut(s)	91, 462, 892, 924, 925, 991, 1366, 1389, 2068
NruI	TCGCGA	1 cut(s)	1916
NsiI	ATGCAT	1 cut(s)	1384
NspI	RCATGY	3 cut(s)	670, 920, 1826
PaeR7I	CTCGAG	1 cut(s)	2007
PasI	CCCWGGG	1 cut(s)	1361
PceI	AGGCCT	1 cut(s)	177
PciI	ACATGT	2 cut(s)	916, 1822
PctI	GAATGC	2 cut(s)	222, 1298
PfeI	GAWTC	2 cut(s)	97, 2037
Pfl23II	CGTACG	1 cut(s)	1354
PflMI	CCANNNNNTGG	1 cut(s)	456
PfoI	TCCNGGA	1 cut(s)	1264
PkrI	GCNGC	3 cut(s)	1184, 1261, 1531
Ple19I	CGATCG	2 cut(s)	1522, 1914
PleI	GAGTC	1 cut(s)	830
PpsI	GAGTC	1 cut(s)	830
PpuMI	RGGWCCY	3 cut(s)	890, 923, 1365
PscI	ACATGT	2 cut(s)	916, 1822
Psp5II	RGGWCCY	3 cut(s)	890, 923, 1365
Psp6I	CCWGG	7 cut(s)	352, 596, 708, 1264, 1360, 1390, 1709
PspEI	GGTNACC	2 cut(s)	1301, 1705
PspFI	CCCAGC	1 cut(s)	866
PspGI	CCWGG	7 cut(s)	352, 596, 708, 1264, 1360, 1390, 1709
PspLI	CGTACG	1 cut(s)	1354
PspN4I	GGNNCC	9 cut(s)	91, 462, 892, 924, 925, 991, 1366, 1389, 2068
PspPI	GGNCC	9 cut(s)	890, 923, 990, 1019, 1195, 1314, 1365, 1490, 2066
PspPPI	RGGWCCY	3 cut(s)	890, 923, 1365
PsrI	GAACNNNNNNTAC	6 cut(s)	388, 420, 963, 995, 1775, 1807
PstI	CTGCAG	1 cut(s)	1531
PsuI	RGATCY	2 cut(s)	460, 1549
PvuI	CGATCG	2 cut(s)	1522, 1914
RruI	TCGCGA	1 cut(s)	1916
RsaI	GTAC	8 cut(s)	91, 329, 952, 1230, 1356, 1462, 1565, 1940
RsaNI	GTAC	8 cut(s)	90, 328, 951, 1229, 1355, 1461, 1564, 1939
RseI	CAYNNNNRTG	1 cut(s)	452
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	6 cut(s)	491, 609, 879, 1038, 1569, 1761
SatI	GCNGC	3 cut(s)	1183, 1260, 1530
Sau96I	GGNCC	9 cut(s)	890, 923, 990, 1019, 1195, 1314, 1365, 1490, 2066
SchI	GAGTC	1 cut(s)	830
SfaNI	GCATC	2 cut(s)	291, 1075
SfcI	CTRYAG	1 cut(s)	1527
Sfr274I	CTCGAG	1 cut(s)	2007
SinI	GGWCC	6 cut(s)	890, 923, 990, 1195, 1314, 1365
SlaI	CTCGAG	1 cut(s)	2007
SmiMI	CAYNNNNRTG	1 cut(s)	452
SmlI	CTYRAG	1 cut(s)	2007
SmoI	CTYRAG	1 cut(s)	2007
SseBI	AGGCCT	1 cut(s)	177
SsiI	CCGC	5 cut(s)	40, 725, 1182, 1198, 1481
SspI	AATATT	2 cut(s)	788, 2095
SspMI	CTAG	2 cut(s)	1766, 1976
StuI	AGGCCT	1 cut(s)	177
StyI	CCWWGG	1 cut(s)	1001
TaaI	ACNGT	5 cut(s)	409, 604, 934, 1177, 1938
TaiI	ACGT	4 cut(s)	1230, 1545, 1584, 1776
TaqI	TCGA	7 cut(s)	5, 285, 685, 747, 791, 1522, 2008
TatI	WGTACW	2 cut(s)	1563, 1938
TauI	GCSGC	1 cut(s)	1185
TfiI	GAWTC	2 cut(s)	97, 2037
Tru1I	TTAA	6 cut(s)	491, 609, 879, 1038, 1569, 1761
Tru9I	TTAA	6 cut(s)	491, 609, 879, 1038, 1569, 1761
TscAI	CASTG	4 cut(s)	160, 908, 1076, 1594
TseI	GCWGC	2 cut(s)	1259, 1529
TspGWI	ACGGA	1 cut(s)	1229
TspRI	CASTG	4 cut(s)	160, 908, 1076, 1594
Van91I	CCANNNNNTGG	1 cut(s)	456
VpaK11BI	GGWCC	6 cut(s)	890, 923, 990, 1195, 1314, 1365
XapI	RAATTY	4 cut(s)	400, 755, 1535, 1926
XceI	RCATGY	3 cut(s)	670, 920, 1826
XhoI	CTCGAG	1 cut(s)	2007
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	2 cut(s)	1766, 1976
Zsp2I	ATGCAT	1 cut(s)	1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.