Rmu_co8502923.1_g000001
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8502923.1
Physical Location & Seq
Forward (+)
1 .. 3081
3081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8502923.1_g000001.1.cds

Sequence Viewer

Length: 1786 bp
ttttccaaactgtcggtccttctatgacagctggtgttttatcaatattgtttgttatgttatttggtggctttgttatgccaaagccttatatgccagtttggttgaagtggggattttgggtgtctcctttgacatatggagaaataggcataacagttaatgaatttctggcacctcggtgggaaaaggtgtctggaaacacaactcttgggaaacaagtgctggaaagccgcggattgcatttcgatgactatttttattggatatcagttggtgctttaatgggattcacattactattcaatattggtttcaccttggctttaactttcttgaagtctcctggaaagtccctttctcttatttcttatgaaaagtaccatcaactacaaggacaaagagacgacagaggcagtttagatgcagagggagaatccaccggtgaacctaagactagtgtagaacctaagaagggaaggatggttttaccatttgagcccctaactgttacattccaagatgtacaatactatgttgacacccctttggaaatgagaaagggaggctttgagcataacaagctccagcttctatctgatattacaggtgcattcaggccaggtgttctgacagcattaatgggtgtcagcggagctggcaaaacaactctcatggatgttctttgtggacgaaaaaccagtggtacaattgaaggagaaataagaatcagtgggtatcctaaggttcaagacacatttgcaaggatatcaggctactgtgagcaaaatgacatacattctccacaaataactgtggaagaatcagtagtatattctgcttggttgcggctcccgtctcagattgattcaaagaccaaagcagaatttgtaaacgaggttcttgaaactattgaacttgatgggattaaagattccttggtaggcatggcaggagttggtggtttatcgactgagcaacgtaaacggttgaccctagctgtggaacttgtagccaatccatctatcatgttcatggatgaaccaacttctggtttagatgcacgggcggctgctatcgttatgagagcagtgaagaatgttgttgcaacaggaagaacagttgtttgcaccatccatcaaccaagtattgacatttttgaggcatttgatgagttgattctcatgaaaattggaggacgcataatctattctggccaacttggacggcactcaagcatggttattgagtatcttgagagtatccctggggtgccctcaatcaaagacaattacaatccggcaacatggatgttagaagttacttcaaaatctgcagaagctgaccttggtatagattttgcacaaatttatagggaatcggccttgtatgagaagaacaaggagttagtcaagcaagcgagttcaccgtctcctggttcaaaggatttggagtttcctacccgctatccacaaaatggttgggggcagttcaaagcgtgcttttggaaacagaatttgtcttattggagaagtccctcgtataatctggcacggatccttttcatgtgtttctcagctgtgttgtttggaacactgtactggaatcaaggagagaaaataaataaccagcaggagctcttcaatgtgtttggttcaatgttcgtggcaataatcttcgttggcatttacaatagcacaacagttctaccatttgttgcaacagaacggaatgttctgtatcgagaaagatatgcaggaatgttctcttcatgggcctattcatt

Protein Analysis

594

Amino Acids

66.29

Weight (kDa)

5.88

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 174, 1272
AccB7I CCANNNNNTGG 2 cut(s) 1051, 1477
AccII CGCG 1 cut(s) 236
AciI CCGC 6 cut(s) 234, 236, 653, 849, 1069, 1464
AclWI GGATC 2 cut(s) 1551, 1564
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 4 cut(s) 166, 886, 1367, 1515
AfaI GTAC 4 cut(s) 382, 527, 708, 1600
AfiI CCNNNNNNNGG 5 cut(s) 475, 1002, 1051, 1435, 1477
AgeI ACCGGT 1 cut(s) 442
AhlI ACTAGT 1 cut(s) 457
AjnI CCWGG 4 cut(s) 345, 621, 1266, 1434
AjuI GAANNNNNNNTTGG 2 cut(s) 1331, 1363
AleI CACNNNNGTG 1 cut(s) 180
AluBI AGCT 8 cut(s) 31, 585, 591, 658, 1000, 1342, 1579, 1638
AluI AGCT 8 cut(s) 31, 585, 591, 658, 1000, 1342, 1579, 1638
Alw21I GWGCWC 1 cut(s) 1640
Alw26I GTCTC 5 cut(s) 131, 347, 398, 863, 1436
AlwI GGATC 2 cut(s) 1551, 1564
AlwNI CAGNNNCTG 1 cut(s) 1342
AoxI GGCC 4 cut(s) 619, 1215, 1382, 1775
ApeKI GCWGC 1 cut(s) 1072
ApoI RAATTY 4 cut(s) 166, 886, 1367, 1515
ArsI GACNNNNNNTTYG 1 cut(s) 32
AseI ATTAAT 1 cut(s) 640
AsiGI ACCGGT 1 cut(s) 442
AspS9I GGNCC 2 cut(s) 16, 1775
AsuHPI GGTGA 3 cut(s) 309, 457, 1418
AvaII GGWCC 1 cut(s) 16
AxyI CCTNAGG 1 cut(s) 743
BaeGI GKGCMC 1 cut(s) 1277
BalI TGGCCA 1 cut(s) 1217
BamHI GGATCC 1 cut(s) 1556
BanI GGYRCC 2 cut(s) 174, 1272
BanII GRGCYC 2 cut(s) 503, 1640
Bbv12I GWGCWC 1 cut(s) 1640
BbvI GCAGC 1 cut(s) 1059
BccI CCATC 6 cut(s) 392, 477, 916, 1029, 1141, 1145
BceAI ACGGC 1 cut(s) 1243
BciT130I CCWGG 4 cut(s) 347, 623, 1268, 1436
BciVI GTATCC 2 cut(s) 749, 1273
BcoDI GTCTC 5 cut(s) 131, 347, 398, 863, 1436
BcuI ACTAGT 1 cut(s) 457
BfaI CTAG 2 cut(s) 458, 997
BfmI CTRYAG 1 cut(s) 1334
BfuI GTATCC 2 cut(s) 749, 1273
BisI GCNGC 4 cut(s) 234, 850, 1070, 1073
BlsI GCNGC 4 cut(s) 235, 851, 1071, 1074
Bme1390I CCNGG 4 cut(s) 347, 623, 1268, 1436
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 16, 1775
BmiI GGNNCC 4 cut(s) 176, 853, 1274, 1558
BmrFI CCNGG 4 cut(s) 347, 623, 1268, 1436
BmsI GCATC 2 cut(s) 414, 1050
BpmI CTGGAG 1 cut(s) 571
BpuEI CTTGAG 2 cut(s) 1218, 1276
BsaJI CCNNGG 7 cut(s) 178, 234, 320, 938, 1266, 1267, 1347
BsaWI WCCGGW 1 cut(s) 442
Bsc4I CCNNNNNNNGG 5 cut(s) 475, 1002, 1051, 1435, 1477
Bse118I RCCGGY 1 cut(s) 442
Bse1I ACTGG 3 cut(s) 97, 701, 1606
Bse21I CCTNAGG 1 cut(s) 743
BseBI CCWGG 4 cut(s) 347, 623, 1268, 1436
BseDI CCNNGG 7 cut(s) 178, 234, 320, 938, 1266, 1267, 1347
BseGI GGATG 5 cut(s) 488, 684, 1044, 1133, 1316
BseLI CCNNNNNNNGG 5 cut(s) 475, 1002, 1051, 1435, 1477
BseMII CTCAG 3 cut(s) 874, 965, 1589
BseNI ACTGG 3 cut(s) 97, 701, 1606
BseSI GKGCMC 1 cut(s) 1277
BseXI GCAGC 1 cut(s) 1059
Bsh1236I CGCG 1 cut(s) 236
BshFI GGCC 4 cut(s) 621, 1217, 1384, 1777
BshNI GGYRCC 2 cut(s) 174, 1272
BshTI ACCGGT 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 1640
BsiSI CCGG 2 cut(s) 443, 1300
BslFI GGGAC 2 cut(s) 339, 1520
BslI CCNNNNNNNGG 5 cut(s) 475, 1002, 1051, 1435, 1477
BsmAI GTCTC 5 cut(s) 131, 347, 398, 863, 1436
BsmBI CGTCTC 3 cut(s) 398, 863, 1436
BsmFI GGGAC 2 cut(s) 339, 1520
BsmI GAATGC 1 cut(s) 613
BsnI GGCC 4 cut(s) 621, 1217, 1384, 1777
Bsp1286I GDGCHC 3 cut(s) 503, 1277, 1640
Bsp1407I TGTACA 1 cut(s) 525
Bsp143I GATC 1 cut(s) 1556
BspACI CCGC 6 cut(s) 234, 236, 653, 849, 1069, 1464
BspANI GGCC 4 cut(s) 621, 1217, 1384, 1777
BspCNI CTCAG 3 cut(s) 873, 966, 1588
BspFNI CGCG 1 cut(s) 236
BspHI TCATGA 1 cut(s) 1184
BspLI GGNNCC 4 cut(s) 176, 853, 1274, 1558
BspMAI CTGCAG 1 cut(s) 1338
BspPI GGATC 2 cut(s) 1551, 1564
BspQI GCTCTTC 1 cut(s) 1645
BspT107I GGYRCC 2 cut(s) 174, 1272
BsrFI RCCGGY 1 cut(s) 442
BsrGI TGTACA 1 cut(s) 525
BsrI ACTGG 3 cut(s) 97, 701, 1606
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 7 cut(s) 178, 234, 320, 938, 1266, 1267, 1347
BssMI GATC 1 cut(s) 1556
BssT1I CCWWGG 3 cut(s) 320, 938, 1347
Bst2UI CCWGG 4 cut(s) 347, 623, 1268, 1436
Bst6I CTCTTC 2 cut(s) 1645, 1773
BstAUI TGTACA 1 cut(s) 525
BstC8I GCNNGC 3 cut(s) 660, 1418, 1500
BstDEI CTNAG 6 cut(s) 452, 470, 743, 860, 974, 1575
BstDSI CCRYGG 1 cut(s) 234
BstF5I GGATG 5 cut(s) 488, 684, 1044, 1133, 1316
BstFNI CGCG 1 cut(s) 236
BstKTI GATC 1 cut(s) 1559
BstMAI GTCTC 5 cut(s) 131, 347, 398, 863, 1436
BstMBI GATC 1 cut(s) 1556
BstMWI GCNNNNNNNGC 4 cut(s) 93, 582, 659, 1069
BstNI CCWGG 4 cut(s) 347, 623, 1268, 1436
BstSCI CCNGG 4 cut(s) 345, 621, 1266, 1434
BstSFI CTRYAG 1 cut(s) 1334
BstSLI GKGCMC 1 cut(s) 1277
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 1 cut(s) 1059
BstX2I RGATCY 1 cut(s) 1556
BstYI RGATCY 1 cut(s) 1556
Bsu36I CCTNAGG 1 cut(s) 743
BsuI GTATCC 2 cut(s) 749, 1273
BsuRI GGCC 4 cut(s) 621, 1217, 1384, 1777
BtgI CCRYGG 1 cut(s) 234
BtsCI GGATG 5 cut(s) 488, 684, 1044, 1133, 1316
BtsI GCAGTG 1 cut(s) 1097
BtsIMutI CAGTG 4 cut(s) 708, 738, 1097, 1594
Cac8I GCNNGC 3 cut(s) 660, 1418, 1500
CaiI CAGNNNCTG 1 cut(s) 1342
CciI TCATGA 1 cut(s) 1184
Cfr10I RCCGGY 1 cut(s) 442
Cfr13I GGNCC 2 cut(s) 16, 1775
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 1 cut(s) 1208
Csp6I GTAC 4 cut(s) 381, 526, 707, 1599
CspAI ACCGGT 1 cut(s) 442
CspCI CAANNNNNGTGG 2 cut(s) 1646, 1681
CviAII CATG 9 cut(s) 675, 948, 1029, 1035, 1185, 1239, 1307, 1566, 1772
CviQI GTAC 4 cut(s) 381, 526, 707, 1599
DdeI CTNAG 6 cut(s) 452, 470, 743, 860, 974, 1575
DpnI GATC 1 cut(s) 1558
DpnII GATC 1 cut(s) 1556
EaeI YGGCCR 1 cut(s) 1215
Eam1104I CTCTTC 2 cut(s) 1645, 1773
EarI CTCTTC 2 cut(s) 1645, 1773
Ecl136II GAGCTC 1 cut(s) 1638
Eco130I CCWWGG 3 cut(s) 320, 938, 1347
Eco24I GRGCYC 2 cut(s) 503, 1640
Eco32I GATATC 2 cut(s) 269, 770
Eco47I GGWCC 1 cut(s) 16
Eco53kI GAGCTC 1 cut(s) 1638
Eco81I CCTNAGG 1 cut(s) 743
EcoICRI GAGCTC 1 cut(s) 1638
EcoRII CCWGG 4 cut(s) 345, 621, 1266, 1434
EcoRV GATATC 2 cut(s) 269, 770
EcoT14I CCWWGG 3 cut(s) 320, 938, 1347
EcoT38I GRGCYC 2 cut(s) 503, 1640
ErhI CCWWGG 3 cut(s) 320, 938, 1347
Esp3I CGTCTC 3 cut(s) 398, 863, 1436
FaeI CATG 9 cut(s) 678, 951, 1032, 1038, 1188, 1242, 1310, 1569, 1775
FalI AAGNNNNNCTT 4 cut(s) 553, 585, 1331, 1363
FaqI GGGAC 2 cut(s) 339, 1520
FatI CATG 9 cut(s) 674, 947, 1028, 1034, 1184, 1238, 1306, 1565, 1771
FauI CCCGC 1 cut(s) 1471
FauNDI CATATG 1 cut(s) 138
Fnu4HI GCNGC 4 cut(s) 234, 850, 1070, 1073
FokI GGATG 5 cut(s) 495, 691, 1051, 1120, 1323
FriOI GRGCYC 2 cut(s) 503, 1640
Fsp4HI GCNGC 4 cut(s) 234, 850, 1070, 1073
FspBI CTAG 2 cut(s) 458, 997
GluI GCNGC 4 cut(s) 234, 850, 1070, 1073
GsuI CTGGAG 1 cut(s) 571
HaeIII GGCC 4 cut(s) 621, 1217, 1384, 1777
HapII CCGG 2 cut(s) 443, 1300
HgaI GACGC 1 cut(s) 1208
Hin1II CATG 9 cut(s) 678, 951, 1032, 1038, 1188, 1242, 1310, 1569, 1775
HincII GTYRAC 2 cut(s) 540, 992
HindII GTYRAC 2 cut(s) 540, 992
HinfI GANTC 9 cut(s) 290, 436, 728, 823, 868, 934, 1179, 1378, 1605
HpaII CCGG 2 cut(s) 443, 1300
HphI GGTGA 3 cut(s) 309, 457, 1418
Hpy166II GTNNAC 7 cut(s) 448, 540, 691, 894, 985, 992, 1426
Hpy188I TCNGA 3 cut(s) 600, 632, 863
Hpy188III TCNNGA 7 cut(s) 197, 336, 751, 904, 1185, 1255, 1744
Hpy8I GTNNAC 7 cut(s) 448, 540, 691, 894, 985, 992, 1426
HpyAV CCTTC 4 cut(s) 29, 468, 473, 709
HpyCH4IV ACGT 1 cut(s) 981
HpyF10VI GCNNNNNNNGC 4 cut(s) 93, 582, 659, 1069
HpyF3I CTNAG 6 cut(s) 452, 470, 743, 860, 974, 1575
HpySE526I ACGT 1 cut(s) 981
Hsp92II CATG 9 cut(s) 678, 951, 1032, 1038, 1188, 1242, 1310, 1569, 1775
KspI CCGCGG 1 cut(s) 237
Kzo9I GATC 1 cut(s) 1556
LguI GCTCTTC 1 cut(s) 1645
LmnI GCTCC 4 cut(s) 590, 655, 857, 1635
Lsp1109I GCAGC 1 cut(s) 1059
LweI GCATC 2 cut(s) 414, 1050
MaeI CTAG 2 cut(s) 458, 997
MaeII ACGT 1 cut(s) 981
MaeIII GTNAC 2 cut(s) 510, 1320
MalI GATC 1 cut(s) 1558
MboI GATC 1 cut(s) 1556
MboII GAAGA 7 cut(s) 832, 1107, 1127, 1407, 1632, 1668, 1760
MfeI CAATTG 1 cut(s) 710
MflI RGATCY 1 cut(s) 1556
MhlI GDGCHC 3 cut(s) 503, 1277, 1640
MlsI TGGCCA 1 cut(s) 1217
MluCI AATT 7 cut(s) 166, 710, 886, 1190, 1290, 1367, 1515
MluNI TGGCCA 1 cut(s) 1217
MnlI CCTC 9 cut(s) 188, 406, 423, 559, 891, 1155, 1189, 1287, 1548
Mox20I TGGCCA 1 cut(s) 1217
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 5 cut(s) 161, 283, 328, 640, 929
MslI CAYNNNNRTG 3 cut(s) 180, 248, 1033
Msp20I TGGCCA 1 cut(s) 1217
MspA1I CMGCKG 4 cut(s) 31, 236, 653, 1579
MspI CCGG 2 cut(s) 443, 1300
MspR9I CCNGG 4 cut(s) 347, 623, 1268, 1436
MunI CAATTG 1 cut(s) 710
Mva1269I GAATGC 1 cut(s) 613
MvaI CCWGG 4 cut(s) 347, 623, 1268, 1436
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 4 cut(s) 93, 582, 659, 1069
NdeI CATATG 1 cut(s) 138
NdeII GATC 1 cut(s) 1556
NlaIII CATG 9 cut(s) 678, 951, 1032, 1038, 1188, 1242, 1310, 1569, 1775
NlaIV GGNNCC 4 cut(s) 176, 853, 1274, 1558
OliI CACNNNNGTG 1 cut(s) 180
PagI TCATGA 1 cut(s) 1184
PasI CCCWGGG 1 cut(s) 1267
PciSI GCTCTTC 1 cut(s) 1645
PctI GAATGC 1 cut(s) 613
PfeI GAWTC 9 cut(s) 290, 436, 728, 823, 868, 934, 1179, 1378, 1605
PflMI CCANNNNNTGG 2 cut(s) 1051, 1477
PfoI TCCNGGA 1 cut(s) 345
PinAI ACCGGT 1 cut(s) 442
PkrI GCNGC 4 cut(s) 235, 851, 1071, 1074
PshBI ATTAAT 1 cut(s) 640
Psp124BI GAGCTC 1 cut(s) 1640
Psp6I CCWGG 4 cut(s) 345, 621, 1266, 1434
PspGI CCWGG 4 cut(s) 345, 621, 1266, 1434
PspN4I GGNNCC 4 cut(s) 176, 853, 1274, 1558
PspPI GGNCC 2 cut(s) 16, 1775
PsrI GAACNNNNNNTAC 2 cut(s) 884, 916
PstI CTGCAG 1 cut(s) 1338
PstNI CAGNNNCTG 1 cut(s) 1342
PsuI RGATCY 1 cut(s) 1556
PvuII CAGCTG 2 cut(s) 31, 1579
RsaI GTAC 4 cut(s) 382, 527, 708, 1600
RsaNI GTAC 4 cut(s) 381, 526, 707, 1599
RseI CAYNNNNRTG 3 cut(s) 180, 248, 1033
SacI GAGCTC 1 cut(s) 1640
SacII CCGCGG 1 cut(s) 237
SapI GCTCTTC 1 cut(s) 1645
SaqAI TTAA 5 cut(s) 161, 283, 328, 640, 929
SatI GCNGC 4 cut(s) 234, 850, 1070, 1073
Sau3AI GATC 1 cut(s) 1556
Sau96I GGNCC 2 cut(s) 16, 1775
ScrFI CCNGG 4 cut(s) 347, 623, 1268, 1436
SduI GDGCHC 3 cut(s) 503, 1277, 1640
SfaNI GCATC 2 cut(s) 414, 1050
SfcI CTRYAG 1 cut(s) 1334
Sfr303I CCGCGG 1 cut(s) 237
SgrAI CRCCGGYG 1 cut(s) 442
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 1 cut(s) 16
SmiMI CAYNNNNRTG 3 cut(s) 180, 248, 1033
SmlI CTYRAG 2 cut(s) 1233, 1255
SmoI CTYRAG 2 cut(s) 1233, 1255
SpeI ACTAGT 1 cut(s) 457
Sse9I AATT 7 cut(s) 166, 710, 886, 1190, 1290, 1367, 1515
SsiI CCGC 6 cut(s) 234, 236, 653, 849, 1069, 1464
SspI AATATT 2 cut(s) 47, 309
SspMI CTAG 2 cut(s) 458, 997
SstI GAGCTC 1 cut(s) 1640
StyD4I CCNGG 4 cut(s) 345, 621, 1266, 1434
StyI CCWWGG 3 cut(s) 320, 938, 1347
TaiI ACGT 1 cut(s) 984
TaqI TCGA 3 cut(s) 248, 970, 1743
TaqII GACCGA 1 cut(s) 4
TasI AATT 7 cut(s) 166, 710, 886, 1190, 1290, 1367, 1515
TatI WGTACW 2 cut(s) 525, 1598
TauI GCSGC 3 cut(s) 236, 852, 1072
TfiI GAWTC 9 cut(s) 290, 436, 728, 823, 868, 934, 1179, 1378, 1605
Tru1I TTAA 5 cut(s) 161, 283, 328, 640, 929
Tru9I TTAA 5 cut(s) 161, 283, 328, 640, 929
TscAI CASTG 4 cut(s) 708, 738, 1097, 1601
TseI GCWGC 1 cut(s) 1072
TspDTI ATGAA 8 cut(s) 179, 389, 1023, 1055, 1201, 1554, 1760, 1772
TspGWI ACGGA 2 cut(s) 1569, 1743
TspRI CASTG 4 cut(s) 708, 738, 1097, 1601
Van91I CCANNNNNTGG 2 cut(s) 1051, 1477
VpaK11BI GGWCC 1 cut(s) 16
VspI ATTAAT 1 cut(s) 640
XapI RAATTY 4 cut(s) 166, 886, 1367, 1515
XcmI CCANNNNNNNNNTGG 1 cut(s) 1478
XspI CTAG 2 cut(s) 458, 997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.