pleiotropic drug resistance protein 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1044500.v1.1 |
| pyrus_communis | pycom04g16560 |
| rosa_chinensis | RchiOBHm_Chr2g0169401 |
| rosa_multiflora | Rmu_co8440651.1_g000001 Rmu_co8502923.1_g000001 Rmu_sc0019699.1_g000001 |
| rosa_samantha | Rh2BG624000 Rh2BG624200 Rh2BG624300 Rh2BG624400 Rh2CG592300 Rh2CG592600 Rh2CG592900 Rh2CG593100 Rh3BG089500 Rh3DG090500 Rh4BG278600 Rh4CG292700 Rh4CG292800 Rh4CG293900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1393 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 956, 2240, 2624 |
| AccBSI | CCGCTC | 1 cut(s) | 802 |
| AccI | GTMKAC | 1 cut(s) | 2502 |
| AccII | CGCG | 3 cut(s) | 307, 2922, 3162 |
| AciI | CCGC | 5 cut(s) | 305, 800, 1077, 2920, 2922 |
| AclWI | GGATC | 6 cut(s) | 449, 453, 1006, 2425, 3140, 3203 |
| AcsI | RAATTY | 2 cut(s) | 757, 888 |
| AcuI | CTGAAG | 6 cut(s) | 432, 1172, 1209, 2389, 2570, 2730 |
| AfaI | GTAC | 8 cut(s) | 747, 1665, 1873, 2528, 2666, 2680, 2891, 2916 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 956, 1021, 1814, 2198, 2240, 2624 |
| AflIII | ACRYGT | 1 cut(s) | 3160 |
| AhlI | ACTAGT | 1 cut(s) | 3019 |
| AjiI | CACGTC | 1 cut(s) | 1812 |
| AjnI | CCWGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| Alw21I | GWGCWC | 1 cut(s) | 2359 |
| Alw26I | GTCTC | 2 cut(s) | 873, 2270 |
| AlwI | GGATC | 6 cut(s) | 449, 453, 1006, 2425, 3140, 3203 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1318 |
| Ama87I | CYCGRG | 1 cut(s) | 2788 |
| AoxI | GGCC | 2 cut(s) | 67, 2112 |
| ApeKI | GCWGC | 7 cut(s) | 248, 349, 383, 503, 1832, 1835, 2333 |
| ApoI | RAATTY | 2 cut(s) | 757, 888 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 534, 786, 1665 |
| AspLEI | GCGC | 1 cut(s) | 2493 |
| AspS9I | GGNCC | 6 cut(s) | 17, 67, 73, 408, 944, 2862 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 2402, 2569 |
| AvaI | CYCGRG | 1 cut(s) | 2788 |
| AvaII | GGWCC | 5 cut(s) | 17, 73, 408, 944, 2862 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1029, 1062 |
| BanII | GRGCYC | 2 cut(s) | 625, 1266 |
| Bbv12I | GWGCWC | 1 cut(s) | 2359 |
| BbvI | GCAGC | 7 cut(s) | 260, 361, 370, 490, 1822, 1844, 2320 |
| BccI | CCATC | 7 cut(s) | 154, 167, 1399, 1432, 1627, 1792, 2238 |
| BciT130I | CCWGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| BciVI | GTATCC | 2 cut(s) | 1156, 2960 |
| BclI | TGATCA | 2 cut(s) | 574, 2559 |
| BcoDI | GTCTC | 2 cut(s) | 873, 2270 |
| BcuI | ACTAGT | 1 cut(s) | 3019 |
| BfaI | CTAG | 8 cut(s) | 215, 617, 884, 1641, 2171, 2414, 2984, 3020 |
| BfmI | CTRYAG | 3 cut(s) | 384, 1349, 2097 |
| BfuAI | ACCTGC | 1 cut(s) | 1393 |
| BfuI | GTATCC | 2 cut(s) | 1156, 2960 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2111 |
| BisI | GCNGC | 8 cut(s) | 249, 350, 384, 504, 800, 1833, 1836, 2334 |
| BlpI | GCTNAGC | 1 cut(s) | 2127 |
| BlsI | GCNGC | 8 cut(s) | 250, 351, 385, 505, 801, 1834, 1837, 2335 |
| BmcAI | AGTACT | 1 cut(s) | 1665 |
| Bme1390I | CCNGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| Bme18I | GGWCC | 5 cut(s) | 17, 73, 408, 944, 2862 |
| BmeT110I | CYCGRG | 1 cut(s) | 2788 |
| BmgBI | CACGTC | 1 cut(s) | 1812 |
| BmgT120I | GGNCC | 6 cut(s) | 17, 67, 73, 408, 944, 2862 |
| BmiI | GGNNCC | 5 cut(s) | 18, 75, 622, 1502, 2037 |
| BmrFI | CCNGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| BmsI | GCATC | 6 cut(s) | 437, 918, 1042, 1813, 2345, 2967 |
| BpmI | CTGGAG | 4 cut(s) | 24, 535, 1089, 1551 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2127 |
| BpuEI | CTTGAG | 4 cut(s) | 641, 855, 992, 3173 |
| Bsa29I | ATCGAT | 1 cut(s) | 296 |
| BsaJI | CCNNGG | 5 cut(s) | 128, 360, 624, 1015, 2920 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1087, 1117 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 956, 1021, 1814, 2198, 2240, 2624 |
| Bse1I | ACTGG | 7 cut(s) | 41, 1375, 1468, 2115, 2192, 2639, 2846 |
| Bse3DI | GCAATG | 4 cut(s) | 228, 243, 1062, 2500 |
| BseBI | CCWGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| BseCI | ATCGAT | 1 cut(s) | 296 |
| BseDI | CCNNGG | 5 cut(s) | 128, 360, 624, 1015, 2920 |
| BseGI | GGATG | 7 cut(s) | 933, 1057, 1447, 1619, 1807, 2079, 2249 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 956, 1021, 1814, 2198, 2240, 2624 |
| BseMI | GCAATG | 4 cut(s) | 228, 243, 1062, 2500 |
| BseMII | CTCAG | 6 cut(s) | 1310, 1614, 1638, 2141, 2197, 2478 |
| BseNI | ACTGG | 7 cut(s) | 41, 1375, 1468, 2115, 2192, 2639, 2846 |
| BseRI | GAGGAG | 5 cut(s) | 101, 1971, 2521, 3085, 3090 |
| BseXI | GCAGC | 7 cut(s) | 260, 361, 370, 490, 1822, 1844, 2320 |
| BseYI | CCCAGC | 4 cut(s) | 1984, 2062, 3128, 3171 |
| Bsh1236I | CGCG | 3 cut(s) | 307, 2922, 3162 |
| BshFI | GGCC | 2 cut(s) | 69, 2114 |
| BshVI | ATCGAT | 1 cut(s) | 296 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2359 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2788 |
| BsiSI | CCGG | 1 cut(s) | 1074 |
| BslFI | GGGAC | 4 cut(s) | 59, 342, 1496, 3070 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 956, 1021, 1814, 2198, 2240, 2624 |
| BsmAI | GTCTC | 2 cut(s) | 873, 2270 |
| BsmFI | GGGAC | 4 cut(s) | 59, 342, 1496, 3070 |
| BsmI | GAATGC | 3 cut(s) | 534, 1928, 2409 |
| BsnI | GGCC | 2 cut(s) | 69, 2114 |
| BsoBI | CYCGRG | 1 cut(s) | 2788 |
| Bsp1286I | GDGCHC | 3 cut(s) | 625, 1266, 2359 |
| Bsp1407I | TGTACA | 1 cut(s) | 2678 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2127 |
| BspACI | CCGC | 5 cut(s) | 305, 800, 1077, 2920, 2922 |
| BspANI | GGCC | 2 cut(s) | 69, 2114 |
| BspCNI | CTCAG | 6 cut(s) | 1311, 1613, 1639, 2140, 2196, 2479 |
| BspDI | ATCGAT | 1 cut(s) | 296 |
| BspFNI | CGCG | 3 cut(s) | 307, 2922, 3162 |
| BspHI | TCATGA | 2 cut(s) | 577, 1132 |
| BspLI | GGNNCC | 5 cut(s) | 18, 75, 622, 1502, 2037 |
| BspMAI | CTGCAG | 2 cut(s) | 388, 2101 |
| BspMI | ACCTGC | 1 cut(s) | 1393 |
| BspPI | GGATC | 6 cut(s) | 449, 453, 1006, 2425, 3140, 3203 |
| BsrBI | CCGCTC | 1 cut(s) | 802 |
| BsrDI | GCAATG | 4 cut(s) | 228, 243, 1062, 2500 |
| BsrGI | TGTACA | 1 cut(s) | 2678 |
| BsrI | ACTGG | 7 cut(s) | 41, 1375, 1468, 2115, 2192, 2639, 2846 |
| BssECI | CCNNGG | 5 cut(s) | 128, 360, 624, 1015, 2920 |
| BssNAI | GTATAC | 1 cut(s) | 2503 |
| BssT1I | CCWWGG | 3 cut(s) | 128, 360, 1015 |
| Bst1107I | GTATAC | 1 cut(s) | 2503 |
| Bst2UI | CCWGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| Bst4CI | ACNGT | 6 cut(s) | 739, 1579, 1976, 2459, 2889, 3001 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2330 |
| BstAUI | TGTACA | 1 cut(s) | 2678 |
| BstC8I | GCNNGC | 3 cut(s) | 426, 1547, 1616 |
| BstDEI | CTNAG | 9 cut(s) | 591, 1319, 1600, 1647, 2116, 2127, 2183, 2487, 2950 |
| BstDSI | CCRYGG | 1 cut(s) | 2920 |
| BstF5I | GGATG | 7 cut(s) | 933, 1057, 1447, 1619, 1807, 2079, 2249 |
| BstFNI | CGCG | 3 cut(s) | 307, 2922, 3162 |
| BstHHI | GCGC | 1 cut(s) | 2493 |
| BstMAI | GTCTC | 2 cut(s) | 873, 2270 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 218, 1601, 1832, 2111, 2330, 3125, 3168 |
| BstNI | CCWGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| BstNSI | RCATGY | 3 cut(s) | 428, 2265, 3099 |
| BstSCI | CCNGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| BstSFI | CTRYAG | 3 cut(s) | 384, 1349, 2097 |
| BstUI | CGCG | 3 cut(s) | 307, 2922, 3162 |
| BstV1I | GCAGC | 7 cut(s) | 260, 361, 370, 490, 1822, 1844, 2320 |
| BstX2I | RGATCY | 2 cut(s) | 458, 1011 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 813, 2070 |
| BstYI | RGATCY | 2 cut(s) | 458, 1011 |
| BstZ17I | GTATAC | 1 cut(s) | 2503 |
| Bsu15I | ATCGAT | 1 cut(s) | 296 |
| BsuI | GTATCC | 2 cut(s) | 1156, 2960 |
| BsuRI | GGCC | 2 cut(s) | 69, 2114 |
| BsuTUI | ATCGAT | 1 cut(s) | 296 |
| BtgI | CCRYGG | 1 cut(s) | 2920 |
| BtrI | CACGTC | 1 cut(s) | 1812 |
| BtsCI | GGATG | 7 cut(s) | 933, 1057, 1447, 1619, 1807, 2079, 2249 |
| BtsI | GCAGTG | 2 cut(s) | 503, 2681 |
| BtsIMutI | CAGTG | 7 cut(s) | 48, 503, 910, 1433, 2199, 2632, 2681 |
| BveI | ACCTGC | 1 cut(s) | 1393 |
| Cac8I | GCNNGC | 3 cut(s) | 426, 1547, 1616 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1318 |
| CciI | TCATGA | 2 cut(s) | 577, 1132 |
| CfoI | GCGC | 1 cut(s) | 2493 |
| Cfr13I | GGNCC | 6 cut(s) | 17, 67, 73, 408, 944, 2862 |
| Cfr42I | CCGCGG | 1 cut(s) | 2923 |
| ClaI | ATCGAT | 1 cut(s) | 296 |
| CseI | GACGC | 1 cut(s) | 3168 |
| CsiI | ACCWGGT | 1 cut(s) | 1714 |
| Csp6I | GTAC | 8 cut(s) | 746, 1664, 1872, 2527, 2665, 2679, 2890, 2915 |
| CviQI | GTAC | 8 cut(s) | 746, 1664, 1872, 2527, 2665, 2679, 2890, 2915 |
| DdeI | CTNAG | 9 cut(s) | 591, 1319, 1600, 1647, 2116, 2127, 2183, 2487, 2950 |
| DraI | TTTAAA | 3 cut(s) | 1170, 2257, 2901 |
| Eco130I | CCWWGG | 3 cut(s) | 128, 360, 1015 |
| Eco24I | GRGCYC | 2 cut(s) | 625, 1266 |
| Eco47I | GGWCC | 5 cut(s) | 17, 73, 408, 944, 2862 |
| Eco57I | CTGAAG | 6 cut(s) | 432, 1172, 1209, 2389, 2570, 2730 |
| Eco88I | CYCGRG | 1 cut(s) | 2788 |
| EcoO109I | RGGNCCY | 3 cut(s) | 17, 73, 408 |
| EcoRII | CCWGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| EcoT14I | CCWWGG | 3 cut(s) | 128, 360, 1015 |
| EcoT22I | ATGCAT | 2 cut(s) | 430, 2444 |
| EcoT38I | GRGCYC | 2 cut(s) | 625, 1266 |
| ErhI | CCWWGG | 3 cut(s) | 128, 360, 1015 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1650, 1682 |
| FaqI | GGGAC | 4 cut(s) | 59, 342, 1496, 3070 |
| FauI | CCCGC | 2 cut(s) | 312, 2915 |
| FauNDI | CATATG | 1 cut(s) | 1522 |
| FbaI | TGATCA | 2 cut(s) | 574, 2559 |
| FblI | GTMKAC | 1 cut(s) | 2502 |
| Fnu4HI | GCNGC | 8 cut(s) | 249, 350, 384, 504, 800, 1833, 1836, 2334 |
| FokI | GGATG | 7 cut(s) | 940, 1064, 1454, 1606, 1814, 2086, 2256 |
| FriOI | GRGCYC | 2 cut(s) | 625, 1266 |
| Fsp4HI | GCNGC | 8 cut(s) | 249, 350, 384, 504, 800, 1833, 1836, 2334 |
| FspBI | CTAG | 8 cut(s) | 215, 617, 884, 1641, 2171, 2414, 2984, 3020 |
| GlaI | GCGC | 1 cut(s) | 2492 |
| GluI | GCNGC | 8 cut(s) | 249, 350, 384, 504, 800, 1833, 1836, 2334 |
| GsaI | CCCAGC | 4 cut(s) | 1988, 2066, 3132, 3175 |
| GsuI | CTGGAG | 4 cut(s) | 24, 535, 1089, 1551 |
| HaeIII | GGCC | 2 cut(s) | 69, 2114 |
| HapII | CCGG | 1 cut(s) | 1074 |
| HgaI | GACGC | 1 cut(s) | 3168 |
| HhaI | GCGC | 1 cut(s) | 2493 |
| Hin6I | GCGC | 1 cut(s) | 2491 |
| HinP1I | GCGC | 1 cut(s) | 2491 |
| HincII | GTYRAC | 1 cut(s) | 1755 |
| HindII | GTYRAC | 1 cut(s) | 1755 |
| HindIII | AAGCTT | 3 cut(s) | 829, 2003, 3182 |
| HpaI | GTTAAC | 1 cut(s) | 1755 |
| HpaII | CCGG | 1 cut(s) | 1074 |
| HphI | GGTGA | 3 cut(s) | 23, 2402, 2569 |
| Hpy166II | GTNNAC | 6 cut(s) | 1755, 2393, 2503, 2665, 2681, 3093 |
| Hpy188I | TCNGA | 7 cut(s) | 451, 458, 1119, 1152, 1228, 2488, 3069 |
| Hpy8I | GTNNAC | 6 cut(s) | 1755, 2393, 2503, 2665, 2681, 3093 |
| Hpy99I | CGWCG | 3 cut(s) | 636, 1937, 3162 |
| HpyAV | CCTTC | 8 cut(s) | 30, 257, 575, 662, 930, 1472, 2103, 2956 |
| HpyCH4III | ACNGT | 6 cut(s) | 739, 1579, 1976, 2459, 2889, 3001 |
| HpyCH4IV | ACGT | 3 cut(s) | 542, 631, 1811 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 218, 1601, 1832, 2111, 2330, 3125, 3168 |
| HpyF3I | CTNAG | 9 cut(s) | 591, 1319, 1600, 1647, 2116, 2127, 2183, 2487, 2950 |
| HpySE526I | ACGT | 3 cut(s) | 542, 631, 1811 |
| HspAI | GCGC | 1 cut(s) | 2491 |
| Ksp22I | TGATCA | 2 cut(s) | 574, 2559 |
| KspAI | GTTAAC | 1 cut(s) | 1755 |
| KspI | CCGCGG | 1 cut(s) | 2923 |
| LmnI | GCTCC | 7 cut(s) | 136, 620, 807, 1108, 1418, 2248, 2354 |
| Lsp1109I | GCAGC | 7 cut(s) | 260, 361, 370, 490, 1822, 1844, 2320 |
| LweI | GCATC | 6 cut(s) | 437, 918, 1042, 1813, 2345, 2967 |
| MabI | ACCWGGT | 1 cut(s) | 1714 |
| MaeI | CTAG | 8 cut(s) | 215, 617, 884, 1641, 2171, 2414, 2984, 3020 |
| MaeII | ACGT | 3 cut(s) | 542, 631, 1811 |
| MaeIII | GTNAC | 9 cut(s) | 543, 607, 1251, 1553, 1608, 2083, 2453, 2479, 2637 |
| MbiI | CCGCTC | 1 cut(s) | 802 |
| MfeI | CAATTG | 1 cut(s) | 3114 |
| MflI | RGATCY | 2 cut(s) | 458, 1011 |
| MhlI | GDGCHC | 3 cut(s) | 625, 1266, 2359 |
| MluI | ACGCGT | 1 cut(s) | 3160 |
| MlyI | GAGTC | 2 cut(s) | 364, 925 |
| MmeI | TCCRAC | 1 cut(s) | 2642 |
| Mph1103I | ATGCAT | 2 cut(s) | 430, 2444 |
| MroXI | GAANNNNTTC | 3 cut(s) | 534, 786, 1665 |
| MseI | TTAA | 8 cut(s) | 996, 1169, 1196, 1754, 2256, 2867, 2900, 3165 |
| MslI | CAYNNNNRTG | 2 cut(s) | 423, 2149 |
| MspA1I | CMGCKG | 3 cut(s) | 196, 1835, 2922 |
| MspI | CCGG | 1 cut(s) | 1074 |
| MspR9I | CCNGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| MunI | CAATTG | 1 cut(s) | 3114 |
| Mva1269I | GAATGC | 3 cut(s) | 534, 1928, 2409 |
| MvaI | CCWGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| MvnI | CGCG | 3 cut(s) | 307, 2922, 3162 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 218, 1601, 1832, 2111, 2330, 3125, 3168 |
| NdeI | CATATG | 1 cut(s) | 1522 |
| NlaIV | GGNNCC | 5 cut(s) | 18, 75, 622, 1502, 2037 |
| NmuCI | GTSAC | 5 cut(s) | 543, 1553, 2083, 2479, 2637 |
| NsiI | ATGCAT | 2 cut(s) | 430, 2444 |
| NspI | RCATGY | 3 cut(s) | 428, 2265, 3099 |
| PaeI | GCATGC | 1 cut(s) | 428 |
| PagI | TCATGA | 2 cut(s) | 577, 1132 |
| PctI | GAATGC | 3 cut(s) | 534, 1928, 2409 |
| PdmI | GAANNNNTTC | 3 cut(s) | 534, 786, 1665 |
| PfeI | GAWTC | 8 cut(s) | 1068, 1140, 1229, 1390, 1586, 1994, 2141, 2793 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 956, 2240, 2624 |
| PkrI | GCNGC | 8 cut(s) | 250, 351, 385, 505, 801, 1834, 1837, 2335 |
| PleI | GAGTC | 2 cut(s) | 363, 925 |
| PpsI | GAGTC | 2 cut(s) | 363, 925 |
| PpuMI | RGGWCCY | 3 cut(s) | 17, 73, 408 |
| Psp5II | RGGWCCY | 3 cut(s) | 17, 73, 408 |
| Psp6I | CCWGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| PspFI | CCCAGC | 4 cut(s) | 1984, 2062, 3128, 3171 |
| PspGI | CCWGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| PspN4I | GGNNCC | 5 cut(s) | 18, 75, 622, 1502, 2037 |
| PspPI | GGNCC | 6 cut(s) | 17, 67, 73, 408, 944, 2862 |
| PspPPI | RGGWCCY | 3 cut(s) | 17, 73, 408 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2172, 2204, 2985, 3017 |
| PstI | CTGCAG | 2 cut(s) | 388, 2101 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1318 |
| PsuI | RGATCY | 2 cut(s) | 458, 1011 |
| PvuII | CAGCTG | 2 cut(s) | 196, 1835 |
| RsaI | GTAC | 8 cut(s) | 747, 1665, 1873, 2528, 2666, 2680, 2891, 2916 |
| RsaNI | GTAC | 8 cut(s) | 746, 1664, 1872, 2527, 2665, 2679, 2890, 2915 |
| RseI | CAYNNNNRTG | 2 cut(s) | 423, 2149 |
| SacII | CCGCGG | 1 cut(s) | 2923 |
| SaqAI | TTAA | 8 cut(s) | 996, 1169, 1196, 1754, 2256, 2867, 2900, 3165 |
| SatI | GCNGC | 8 cut(s) | 249, 350, 384, 504, 800, 1833, 1836, 2334 |
| Sau96I | GGNCC | 6 cut(s) | 17, 67, 73, 408, 944, 2862 |
| ScaI | AGTACT | 1 cut(s) | 1665 |
| SchI | GAGTC | 2 cut(s) | 364, 925 |
| ScrFI | CCNGG | 5 cut(s) | 71, 626, 1107, 1606, 1716 |
| SduI | GDGCHC | 3 cut(s) | 625, 1266, 2359 |
| SexAI | ACCWGGT | 1 cut(s) | 1714 |
| SfaNI | GCATC | 6 cut(s) | 437, 918, 1042, 1813, 2345, 2967 |
| SfcI | CTRYAG | 3 cut(s) | 384, 1349, 2097 |
| Sfr303I | CCGCGG | 1 cut(s) | 2923 |
| SgrBI | CCGCGG | 1 cut(s) | 2923 |
| SinI | GGWCC | 5 cut(s) | 17, 73, 408, 944, 2862 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 423, 2149 |
| SmlI | CTYRAG | 4 cut(s) | 656, 870, 1007, 3188 |
| SmoI | CTYRAG | 4 cut(s) | 656, 870, 1007, 3188 |
| SpeI | ACTAGT | 1 cut(s) | 3019 |
| SphI | GCATGC | 1 cut(s) | 428 |
| SsiI | CCGC | 5 cut(s) | 305, 800, 1077, 2920, 2922 |
| SspI | AATATT | 2 cut(s) | 1794, 2424 |
| SspMI | CTAG | 8 cut(s) | 215, 617, 884, 1641, 2171, 2414, 2984, 3020 |
| StyD4I | CCNGG | 5 cut(s) | 69, 624, 1105, 1604, 1714 |
| StyI | CCWWGG | 3 cut(s) | 128, 360, 1015 |
| TaaI | ACNGT | 6 cut(s) | 739, 1579, 1976, 2459, 2889, 3001 |
| TaiI | ACGT | 3 cut(s) | 545, 634, 1814 |
| TaqI | TCGA | 5 cut(s) | 296, 1345, 1733, 1932, 2603 |
| TatI | WGTACW | 5 cut(s) | 1663, 1871, 2526, 2678, 2914 |
| TauI | GCSGC | 1 cut(s) | 802 |
| TfiI | GAWTC | 8 cut(s) | 1068, 1140, 1229, 1390, 1586, 1994, 2141, 2793 |
| Tru1I | TTAA | 8 cut(s) | 996, 1169, 1196, 1754, 2256, 2867, 2900, 3165 |
| Tru9I | TTAA | 8 cut(s) | 996, 1169, 1196, 1754, 2256, 2867, 2900, 3165 |
| TscAI | CASTG | 7 cut(s) | 48, 503, 910, 1440, 2199, 2639, 2688 |
| TseFI | GTSAC | 5 cut(s) | 543, 1553, 2083, 2479, 2637 |
| TseI | GCWGC | 7 cut(s) | 248, 349, 383, 503, 1832, 1835, 2333 |
| Tsp45I | GTSAC | 5 cut(s) | 543, 1553, 2083, 2479, 2637 |
| TspDTI | ATGAA | 9 cut(s) | 479, 594, 631, 1149, 1701, 1786, 1818, 1889, 1964 |
| TspGWI | ACGGA | 2 cut(s) | 2562, 2907 |
| TspRI | CASTG | 7 cut(s) | 48, 503, 910, 1440, 2199, 2639, 2688 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 956, 2240, 2624 |
| VpaK11BI | GGWCC | 5 cut(s) | 17, 73, 408, 944, 2862 |
| XapI | RAATTY | 2 cut(s) | 757, 888 |
| XceI | RCATGY | 3 cut(s) | 428, 2265, 3099 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 200, 2241 |
| XmiI | GTMKAC | 1 cut(s) | 2502 |
| XmnI | GAANNNNTTC | 3 cut(s) | 534, 786, 1665 |
| XspI | CTAG | 8 cut(s) | 215, 617, 884, 1641, 2171, 2414, 2984, 3020 |
| ZrmI | AGTACT | 1 cut(s) | 1665 |
| Zsp2I | ATGCAT | 2 cut(s) | 430, 2444 |