Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000010.1

Orthogroup ID

OG0007672

Physical Location & Seq

Genomic Coordinates Forward (+)

54561 .. 63073

Gene Structure 8513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000010.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

atggcgttgtcaacaggcctcatcacctccaccaccttcctctccggcgagacgtcgtcgctggccaagccttctctcgccgcgtcctcctcctccgctctcaggttcgcctaccccaacttccctgctaacctccgcatgccgcgcaccccaacgcccctcgccgccgtgtcgaagcaggccaccaccaccccacgggagccacgtggcatcatgaagccgcgcaaggtgtcgccggagatgcaggcccttgtcggcgtccctgagatttctcgcacccaagctctgaagctgatttgggcccacattaagggcaacaatcttcaggaccctgaaaacaagaagatcatcgtttgtgatgacaagctgaagaagatttttgcagggaaggaccgtgttggctttcttgaggagggcaataaaatcggtcgccggactctgatcaccactggtcaccggaggttgccggagggggaagggggccttggtttccgtgatcttcatgctttcaataaagcaatgttagcaaagcagggatggcgggttttacataatccagattctcttattgccaaaatgtacaaagccagtttggatggatctgtggtgccttgggcaattggtgtggatgtcactttgcttatgcaggatcttcttttagctctagggaggtgggatatgaataaggtgcagcaactctttgttcttcaagatgtggcacttgtgaagtctcttgtactctcagaacgaaatttgaatgatagaagagtgtggcatcttgacccaaaaggccaatttacggtaaaaagtgcttgtaaactcttcttgggactacgacatgcaactaatggtgggggtgcagcagttatttcaaaggtttggaaaggtgtatggcaagcttgttttcctggaaatgctcgaatttgcatatggaaggtgcttcagaacatattgcttacggttgatagattggtgtcaaatagagtacaaattgagtcctatttgtgtatgctgtgtgggatggggaatgagtcctttgatcatctgtgtcgtttatgtccttttacgaagattttattggaatcggaggaggagctcaggcgagtttgttatgaggtagaggcccgggaaggtgatgtgtttttcagcttaaatgctaggcttactaacttccagttctataggaagccattgcctagtattgggagggggagttgtaggtggaaacctcctgctcaagtttggttaaaggtgaatatggacgaggctttttcaagctctagttctagtgcaggtattggtattgttgttagagatgctattggtacttgtgttgggggtttctatcaggctatggaggatgtttattctgcagaacatgtggaggctcttgctggtagagcagctgtgaattttgtacaagataaaaggttctttctggtagtatttgagacagattctttaactcttactaatgctactaagcaggctgtcattccctatacttccccattgggttgtgtgtatgatgacatcatacaagggttgaatttcattccaggttctatgttcaagcatgcttatcatcaagctaattggatttcggtccggtttccatgcccagctctgacgctgcccaatcctgctcaccggtgcggcctcgtcctgctcaccagtgtcccagtcgacttcatcttctccagtcgatcacctacagcccaccttgtttccacagcagtccactgcatgcagcaacgcagcctcgcctcgcctagcaaaccaccgcgcctggccagccctggcgacccctcacagcccagccccgcgccctgctgcaacccagccccacgcactgatgctgctactgcacctagctccgatcacagcagccccaagcaccgatcacctgtagctgcacacggaagaagacgcacctgcaaaccaaaaggaaggagagcagaaggaggaagaagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000120 GO:0000500 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005730 GO:0006355 GO:0006356 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045943 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SWIB

Protein Analysis

658

Amino Acids

72.4

Weight (kDa)

9.68

Isoelectric Point (pI)

50.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14880 AT2G14880 AT2G14880 AT4G34290
fragaria_vesca	FvH4_2g04600
malus_domestica	MD13G1205100.v1.1
prunus_persica	Prupe.8G139100_v2.0.a1
pyrus_communis	pycom05g09340 pycom10g08680
rosa_chinensis	RchiOBHm_Chr6g0254211
rosa_laevigata	RLG00000014934
rosa_multiflora	Rmu_sc0000010.1_g000013 Rmu_sc0003711.1_g000013 Rmu_sc0003711.1_g000014 Rmu_sc0005652.1_g000031
rosa_roxburghii	Rroxscaffold_7G00211060
rosa_rugosa	Rorug05G0089400 Rorug05G0550700 Rorug05G0551000
rosa_samantha	Rh6AG067100 Rh6BG060300 Rh6CG060200 Rh6DG057200
rosa_wichuraiana	Rw6G005900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1943
AatII	GACGTC	1 cut(s)	56
Acc36I	ACCTGC	2 cut(s)	1283, 1943
AccB1I	GGYRCC	1 cut(s)	607
AccBSI	CCGCTC	1 cut(s)	98
AccI	GTMKAC	1 cut(s)	1686
AccII	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
AclWI	GGATC	2 cut(s)	607, 657
AcoI	YGGCCR	2 cut(s)	63, 1791
AcsI	RAATTY	4 cut(s)	751, 921, 1411, 1549
AcuI	CTGAAG	4 cut(s)	308, 308, 389, 926
AcvI	CACGTG	1 cut(s)	206
AcyI	GRCGYC	2 cut(s)	53, 258
AfaI	GTAC	5 cut(s)	581, 738, 987, 1327, 1419
AfiI	CCNNNNNNNGG	5 cut(s)	102, 195, 310, 799, 1202
AflIII	ACRYGT	1 cut(s)	1378
AgeI	ACCGGT	1 cut(s)	1650
AgsI	TTSAA	7 cut(s)	511, 710, 757, 873, 1275, 1549, 1573
AjnI	CCWGG	4 cut(s)	907, 1558, 1788, 1798
AjuI	GAANNNNNNNTTGG	4 cut(s)	468, 500, 1061, 1093
Alw21I	GWGCWC	1 cut(s)	1098
Alw26I	GTCTC	3 cut(s)	44, 735, 1445
AlwI	GGATC	2 cut(s)	607, 657
Ama87I	CYCGRG	1 cut(s)	1125
ApaI	GGGCCC	1 cut(s)	304
ApoI	RAATTY	4 cut(s)	751, 921, 1411, 1549
AsiGI	ACCGGT	1 cut(s)	1650
AspLEI	GCGC	4 cut(s)	147, 225, 1788, 1828
AspS9I	GGNCC	8 cut(s)	247, 300, 301, 328, 391, 481, 1123, 1606
AsuC2I	CCSGG	2 cut(s)	1126, 1127
AsuHPI	GGTGA	9 cut(s)	16, 436, 446, 1145, 1264, 1640, 1663, 1701, 1896
AvaI	CYCGRG	1 cut(s)	1125
AvaII	GGWCC	3 cut(s)	328, 391, 1606
BaeGI	GKGCMC	1 cut(s)	304
BaeI	ACNNNNGTAYC	2 cut(s)	1317, 1350
BalI	TGGCCA	2 cut(s)	65, 1793
BanI	GGYRCC	1 cut(s)	607
BanII	GRGCYC	2 cut(s)	304, 1098
BbrPI	CACGTG	1 cut(s)	206
BbsI	GAAGAC	1 cut(s)	1933
Bbv12I	GWGCWC	1 cut(s)	1098
BccI	CCATC	3 cut(s)	531, 590, 1015
BceAI	ACGGC	1 cut(s)	152
BcgI	CGANNNNNNTGC	2 cut(s)	406, 440
BciT130I	CCWGG	4 cut(s)	909, 1560, 1790, 1800
BclI	TGATCA	2 cut(s)	441, 1039
BcnI	CCSGG	2 cut(s)	1126, 1127
BcoDI	GTCTC	3 cut(s)	44, 735, 1445
BfaI	CTAG	7 cut(s)	665, 1158, 1197, 1281, 1287, 1773, 1872
BfmI	CTRYAG	4 cut(s)	1180, 1371, 1713, 1908
BfuAI	ACCTGC	2 cut(s)	1283, 1943
Bme1390I	CCNGG	6 cut(s)	909, 1126, 1127, 1560, 1790, 1800
Bme18I	GGWCC	3 cut(s)	328, 391, 1606
BmeT110I	CYCGRG	1 cut(s)	1125
BmgT120I	GGNCC	8 cut(s)	247, 300, 301, 328, 391, 481, 1123, 1606
BmiI	GGNNCC	5 cut(s)	201, 302, 330, 482, 609
BmrFI	CCNGG	6 cut(s)	909, 1126, 1127, 1560, 1790, 1800
BmrI	ACTGGG	1 cut(s)	1676
BmsI	GCATC	5 cut(s)	219, 231, 784, 1306, 1846
BmuI	ACTGGG	1 cut(s)	1676
BpiI	GAAGAC	1 cut(s)	1933
BpmI	CTGGAG	1 cut(s)	1684
Bpu10I	CCTNAGC	1 cut(s)	1097
BpuEI	CTTGAG	2 cut(s)	428, 1221
BpuMI	CCSGG	2 cut(s)	1126, 1127
BsaAI	YACGTR	1 cut(s)	206
BsaHI	GRCGYC	2 cut(s)	53, 258
BsaJI	CCNNGG	5 cut(s)	194, 484, 611, 1125, 1798
BsaWI	WCCGGW	3 cut(s)	456, 1608, 1650
BsaXI	ACNNNNNCTCC	2 cut(s)	1198, 1228
Bsc4I	CCNNNNNNNGG	5 cut(s)	102, 195, 310, 799, 1202
Bse118I	RCCGGY	1 cut(s)	1650
Bse1I	ACTGG	6 cut(s)	454, 588, 1174, 1674, 1682, 1701
Bse3DI	GCAATG	2 cut(s)	525, 1190
BseBI	CCWGG	4 cut(s)	909, 1560, 1790, 1800
BseDI	CCNNGG	5 cut(s)	194, 484, 611, 1125, 1798
BseGI	GGATG	5 cut(s)	542, 601, 634, 1026, 1366
BseLI	CCNNNNNNNGG	5 cut(s)	102, 195, 310, 799, 1202
BseMI	GCAATG	2 cut(s)	525, 1190
BseMII	CTCAG	4 cut(s)	115, 255, 756, 1111
BseNI	ACTGG	6 cut(s)	454, 588, 1174, 1674, 1682, 1701
BseRI	GAGGAG	5 cut(s)	79, 82, 425, 1103, 1106
BseSI	GKGCMC	1 cut(s)	304
BseYI	CCCAGC	3 cut(s)	1621, 1817, 1840
BsgI	GTGCAG	5 cut(s)	710, 879, 1311, 1851, 1899
Bsh1236I	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
Bsh1285I	CGRYCG	1 cut(s)	430
BshNI	GGYRCC	1 cut(s)	607
BshTI	ACCGGT	1 cut(s)	1650
BsiEI	CGRYCG	1 cut(s)	430
BsiHKAI	GWGCWC	1 cut(s)	1098
BsiHKCI	CYCGRG	1 cut(s)	1125
BsiSI	CCGG	8 cut(s)	45, 236, 433, 457, 467, 1126, 1609, 1651
BslFI	GGGAC	3 cut(s)	245, 843, 1664
BslI	CCNNNNNNNGG	5 cut(s)	102, 195, 310, 799, 1202
BsmAI	GTCTC	3 cut(s)	44, 735, 1445
BsmBI	CGTCTC	1 cut(s)	44
BsmFI	GGGAC	3 cut(s)	245, 843, 1664
BsoBI	CYCGRG	1 cut(s)	1125
Bsp120I	GGGCCC	1 cut(s)	300
Bsp1286I	GDGCHC	2 cut(s)	304, 1098
Bsp1407I	TGTACA	2 cut(s)	579, 1417
Bsp143I	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
BspCNI	CTCAG	4 cut(s)	114, 256, 755, 1110
BspFNI	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
BspHI	TCATGA	1 cut(s)	213
BspLI	GGNNCC	5 cut(s)	201, 302, 330, 482, 609
BspMAI	CTGCAG	1 cut(s)	1375
BspMI	ACCTGC	2 cut(s)	1283, 1943
BspPI	GGATC	2 cut(s)	607, 657
BspT107I	GGYRCC	1 cut(s)	607
BsrBI	CCGCTC	1 cut(s)	98
BsrDI	GCAATG	2 cut(s)	525, 1190
BsrFI	RCCGGY	1 cut(s)	1650
BsrGI	TGTACA	2 cut(s)	579, 1417
BsrI	ACTGG	6 cut(s)	454, 588, 1174, 1674, 1682, 1701
BssAI	RCCGGY	1 cut(s)	1650
BssECI	CCNNGG	5 cut(s)	194, 484, 611, 1125, 1798
BssMI	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
BssNI	GRCGYC	2 cut(s)	53, 258
BssT1I	CCWWGG	2 cut(s)	484, 611
Bst2UI	CCWGG	4 cut(s)	909, 1560, 1790, 1800
Bst4CI	ACNGT	3 cut(s)	395, 802, 961
Bst6I	CTCTTC	2 cut(s)	760, 827
BstACI	GRCGYC	2 cut(s)	53, 258
BstAUI	TGTACA	2 cut(s)	579, 1417
BstBAI	YACGTR	1 cut(s)	206
BstC8I	GCNNGC	9 cut(s)	63, 140, 180, 246, 897, 1488, 1578, 1748, 1795
BstDEI	CTNAG	5 cut(s)	101, 264, 742, 1097, 1482
BstDSI	CCRYGG	1 cut(s)	194
BstEII	GGTNACC	1 cut(s)	452
BstF5I	GGATG	5 cut(s)	542, 601, 634, 1026, 1366
BstFNI	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
BstHHI	GCGC	4 cut(s)	147, 225, 1788, 1828
BstKTI	GATC	9 cut(s)	348, 444, 499, 602, 652, 1042, 1709, 1882, 1904
BstMAI	GTCTC	3 cut(s)	44, 735, 1445
BstMBI	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
BstMCI	CGRYCG	1 cut(s)	430
BstMWI	GCNNNNNNNGC	8 cut(s)	67, 144, 241, 524, 538, 1400, 1794, 1865
BstNI	CCWGG	4 cut(s)	909, 1560, 1790, 1800
BstNSI	RCATGY	5 cut(s)	142, 842, 1382, 1580, 1750
BstPI	GGTNACC	1 cut(s)	452
BstSCI	CCNGG	6 cut(s)	907, 1124, 1125, 1558, 1788, 1798
BstSFI	CTRYAG	4 cut(s)	1180, 1371, 1713, 1908
BstSLI	GKGCMC	1 cut(s)	304
BstUI	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
BstV2I	GAAGAC	1 cut(s)	1933
BstX2I	RGATCY	2 cut(s)	599, 649
BstYI	RGATCY	2 cut(s)	599, 649
BtgI	CCRYGG	1 cut(s)	194
BtsCI	GGATG	5 cut(s)	542, 601, 634, 1026, 1366
BtsI	GCAGTG	1 cut(s)	1741
BtsIMutI	CAGTG	4 cut(s)	447, 1681, 1741, 1851
BveI	ACCTGC	2 cut(s)	1283, 1943
Cac8I	GCNNGC	9 cut(s)	63, 140, 180, 246, 897, 1488, 1578, 1748, 1795
CciI	TCATGA	1 cut(s)	213
CfoI	GCGC	4 cut(s)	147, 225, 1788, 1828
Cfr10I	RCCGGY	1 cut(s)	1650
Cfr13I	GGNCC	8 cut(s)	247, 300, 301, 328, 391, 481, 1123, 1606
Cfr9I	CCCGGG	1 cut(s)	1125
CpoI	CGGWCCG	1 cut(s)	1606
CseI	GACGC	4 cut(s)	72, 247, 1639, 1938
Csp6I	GTAC	5 cut(s)	580, 737, 986, 1326, 1418
CspAI	ACCGGT	1 cut(s)	1650
CspCI	CAANNNNNGTGG	2 cut(s)	606, 641
CspI	CGGWCCG	1 cut(s)	1606
CviAII	CATG	8 cut(s)	139, 214, 503, 839, 1379, 1577, 1617, 1747
CviQI	GTAC	5 cut(s)	580, 737, 986, 1326, 1418
DdeI	CTNAG	5 cut(s)	101, 264, 742, 1097, 1482
DpnI	GATC	9 cut(s)	347, 443, 498, 601, 651, 1041, 1708, 1881, 1903
DpnII	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
EaeI	YGGCCR	2 cut(s)	63, 1791
Eam1104I	CTCTTC	2 cut(s)	760, 827
EarI	CTCTTC	2 cut(s)	760, 827
Ecl136II	GAGCTC	1 cut(s)	1096
Eco130I	CCWWGG	2 cut(s)	484, 611
Eco147I	AGGCCT	1 cut(s)	18
Eco24I	GRGCYC	2 cut(s)	304, 1098
Eco47I	GGWCC	3 cut(s)	328, 391, 1606
Eco53kI	GAGCTC	1 cut(s)	1096
Eco57I	CTGAAG	4 cut(s)	308, 308, 389, 926
Eco72I	CACGTG	1 cut(s)	206
Eco88I	CYCGRG	1 cut(s)	1125
Eco91I	GGTNACC	1 cut(s)	452
EcoICRI	GAGCTC	1 cut(s)	1096
EcoO109I	RGGNCCY	3 cut(s)	247, 328, 481
EcoO65I	GGTNACC	1 cut(s)	452
EcoRII	CCWGG	4 cut(s)	907, 1558, 1788, 1798
EcoT14I	CCWWGG	2 cut(s)	484, 611
EcoT38I	GRGCYC	2 cut(s)	304, 1098
ErhI	CCWWGG	2 cut(s)	484, 611
Esp3I	CGTCTC	1 cut(s)	44
FaeI	CATG	8 cut(s)	142, 217, 506, 842, 1382, 1580, 1620, 1750
FalI	AAGNNNNNCTT	2 cut(s)	468, 500
FaqI	GGGAC	3 cut(s)	245, 843, 1664
FatI	CATG	8 cut(s)	138, 213, 502, 838, 1378, 1576, 1616, 1746
FauI	CCCGC	2 cut(s)	534, 1831
FauNDI	CATATG	1 cut(s)	929
FbaI	TGATCA	2 cut(s)	441, 1039
FblI	GTMKAC	1 cut(s)	1686
FokI	GGATG	5 cut(s)	549, 608, 641, 1033, 1373
FriOI	GRGCYC	2 cut(s)	304, 1098
FspBI	CTAG	7 cut(s)	665, 1158, 1197, 1281, 1287, 1773, 1872
GlaI	GCGC	4 cut(s)	146, 224, 1787, 1827
GsaI	CCCAGC	3 cut(s)	1625, 1821, 1844
GsuI	CTGGAG	1 cut(s)	1684
HapII	CCGG	8 cut(s)	45, 236, 433, 457, 467, 1126, 1609, 1651
HgaI	GACGC	4 cut(s)	72, 247, 1639, 1938
HhaI	GCGC	4 cut(s)	147, 225, 1788, 1828
Hin1I	GRCGYC	2 cut(s)	53, 258
Hin1II	CATG	8 cut(s)	142, 217, 506, 842, 1382, 1580, 1620, 1750
Hin6I	GCGC	4 cut(s)	145, 223, 1786, 1826
HinP1I	GCGC	4 cut(s)	145, 223, 1786, 1826
HincII	GTYRAC	2 cut(s)	12, 1687
HindII	GTYRAC	2 cut(s)	12, 1687
HindIII	AAGCTT	1 cut(s)	897
HinfI	GANTC	6 cut(s)	436, 560, 995, 1031, 1082, 1457
HpaII	CCGG	8 cut(s)	45, 236, 433, 457, 467, 1126, 1609, 1651
HphI	GGTGA	9 cut(s)	16, 436, 446, 1145, 1264, 1640, 1663, 1701, 1896
Hpy166II	GTNNAC	4 cut(s)	12, 818, 1687, 1741
Hpy188I	TCNGA	7 cut(s)	288, 441, 745, 945, 1087, 1629, 1879
Hpy188III	TCNNGA	6 cut(s)	214, 326, 407, 557, 710, 779
Hpy8I	GTNNAC	4 cut(s)	12, 818, 1687, 1741
Hpy99I	CGWCG	2 cut(s)	58, 61
HpyAV	CCTTC	8 cut(s)	46, 81, 382, 470, 928, 1124, 1944, 1955
HpyCH4III	ACNGT	3 cut(s)	395, 802, 961
HpyCH4IV	ACGT	2 cut(s)	53, 205
HpyF10VI	GCNNNNNNNGC	8 cut(s)	67, 144, 241, 524, 538, 1400, 1794, 1865
HpyF3I	CTNAG	5 cut(s)	101, 264, 742, 1097, 1482
HpySE526I	ACGT	2 cut(s)	53, 205
Hsp92I	GRCGYC	2 cut(s)	53, 258
Hsp92II	CATG	8 cut(s)	142, 217, 506, 842, 1382, 1580, 1620, 1750
HspAI	GCGC	4 cut(s)	145, 223, 1786, 1826
Ksp22I	TGATCA	2 cut(s)	441, 1039
Kzo9I	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
LmnI	GCTCC	3 cut(s)	199, 1093, 1880
LweI	GCATC	5 cut(s)	219, 231, 784, 1306, 1846
MaeI	CTAG	7 cut(s)	665, 1158, 1197, 1281, 1287, 1773, 1872
MaeII	ACGT	2 cut(s)	53, 205
MaeIII	GTNAC	2 cut(s)	452, 631
MalI	GATC	9 cut(s)	347, 443, 498, 601, 651, 1041, 1708, 1881, 1903
MbiI	CCGCTC	1 cut(s)	98
MboI	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
MfeI	CAATTG	1 cut(s)	618
MflI	RGATCY	2 cut(s)	599, 649
MhlI	GDGCHC	2 cut(s)	304, 1098
MlsI	TGGCCA	2 cut(s)	65, 1793
MluCI	AATT	8 cut(s)	618, 751, 794, 921, 990, 1411, 1549, 1594
MluNI	TGGCCA	2 cut(s)	65, 1793
MlyI	GAGTC	3 cut(s)	430, 1004, 1040
Mox20I	TGGCCA	2 cut(s)	65, 1793
MscI	TGGCCA	2 cut(s)	65, 1793
MseI	TTAA	4 cut(s)	309, 1151, 1247, 1463
Msp20I	TGGCCA	2 cut(s)	65, 1793
MspA1I	CMGCKG	1 cut(s)	1406
MspI	CCGG	8 cut(s)	45, 236, 433, 457, 467, 1126, 1609, 1651
MspR9I	CCNGG	6 cut(s)	909, 1126, 1127, 1560, 1790, 1800
MunI	CAATTG	1 cut(s)	618
MvaI	CCWGG	4 cut(s)	909, 1560, 1790, 1800
MvnI	CGCG	5 cut(s)	83, 145, 223, 1786, 1826
MwoI	GCNNNNNNNGC	8 cut(s)	67, 144, 241, 524, 538, 1400, 1794, 1865
NciI	CCSGG	2 cut(s)	1126, 1127
NdeI	CATATG	1 cut(s)	929
NdeII	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
NlaIII	CATG	8 cut(s)	142, 217, 506, 842, 1382, 1580, 1620, 1750
NlaIV	GGNNCC	5 cut(s)	201, 302, 330, 482, 609
NmuCI	GTSAC	2 cut(s)	452, 631
NspI	RCATGY	5 cut(s)	142, 842, 1382, 1580, 1750
PaeI	GCATGC	3 cut(s)	142, 1580, 1750
PagI	TCATGA	1 cut(s)	213
PaqCI	CACCTGC	1 cut(s)	1943
PceI	AGGCCT	1 cut(s)	18
PciI	ACATGT	1 cut(s)	1378
PcsI	WCGNNNNNNNCGW	1 cut(s)	202
PfeI	GAWTC	3 cut(s)	560, 1082, 1457
PflFI	GACNNNGTC	1 cut(s)	55
PfoI	TCCNGGA	1 cut(s)	907
PinAI	ACCGGT	1 cut(s)	1650
PleI	GAGTC	3 cut(s)	430, 1003, 1039
PmaCI	CACGTG	1 cut(s)	206
PmlI	CACGTG	1 cut(s)	206
PpsI	GAGTC	3 cut(s)	430, 1003, 1039
Ppu21I	YACGTR	1 cut(s)	206
PpuMI	RGGWCCY	1 cut(s)	328
PscI	ACATGT	1 cut(s)	1378
Psp124BI	GAGCTC	1 cut(s)	1098
Psp5II	RGGWCCY	1 cut(s)	328
Psp6I	CCWGG	4 cut(s)	907, 1558, 1788, 1798
PspCI	CACGTG	1 cut(s)	206
PspEI	GGTNACC	1 cut(s)	452
PspFI	CCCAGC	3 cut(s)	1621, 1817, 1840
PspGI	CCWGG	4 cut(s)	907, 1558, 1788, 1798
PspN4I	GGNNCC	5 cut(s)	201, 302, 330, 482, 609
PspOMI	GGGCCC	1 cut(s)	300
PspPI	GGNCC	8 cut(s)	247, 300, 301, 328, 391, 481, 1123, 1606
PspPPI	RGGWCCY	1 cut(s)	328
PstI	CTGCAG	1 cut(s)	1375
PsuI	RGATCY	2 cut(s)	599, 649
PsyI	GACNNNGTC	1 cut(s)	55
PvuII	CAGCTG	1 cut(s)	1406
RsaI	GTAC	5 cut(s)	581, 738, 987, 1327, 1419
RsaNI	GTAC	5 cut(s)	580, 737, 986, 1326, 1418
Rsr2I	CGGWCCG	1 cut(s)	1606
RsrII	CGGWCCG	1 cut(s)	1606
SacI	GAGCTC	1 cut(s)	1098
SalI	GTCGAC	1 cut(s)	1685
SaqAI	TTAA	4 cut(s)	309, 1151, 1247, 1463
Sau3AI	GATC	9 cut(s)	345, 441, 496, 599, 649, 1039, 1706, 1879, 1901
Sau96I	GGNCC	8 cut(s)	247, 300, 301, 328, 391, 481, 1123, 1606
SchI	GAGTC	3 cut(s)	430, 1004, 1040
ScrFI	CCNGG	6 cut(s)	909, 1126, 1127, 1560, 1790, 1800
SduI	GDGCHC	2 cut(s)	304, 1098
SfaNI	GCATC	5 cut(s)	219, 231, 784, 1306, 1846
SfcI	CTRYAG	4 cut(s)	1180, 1371, 1713, 1908
SgrAI	CRCCGGYG	1 cut(s)	1650
SinI	GGWCC	3 cut(s)	328, 391, 1606
SmaI	CCCGGG	1 cut(s)	1127
SmlI	CTYRAG	2 cut(s)	407, 1236
SmoI	CTYRAG	2 cut(s)	407, 1236
SphI	GCATGC	3 cut(s)	142, 1580, 1750
Sse9I	AATT	8 cut(s)	618, 751, 794, 921, 990, 1411, 1549, 1594
SseBI	AGGCCT	1 cut(s)	18
SspMI	CTAG	7 cut(s)	665, 1158, 1197, 1281, 1287, 1773, 1872
SstI	GAGCTC	1 cut(s)	1098
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	6 cut(s)	907, 1124, 1125, 1558, 1788, 1798
StyI	CCWWGG	2 cut(s)	484, 611
TaaI	ACNGT	3 cut(s)	395, 802, 961
TaiI	ACGT	2 cut(s)	56, 208
TaqI	TCGA	4 cut(s)	173, 919, 1686, 1705
TaqII	GACCGA	2 cut(s)	416, 1594
TasI	AATT	8 cut(s)	618, 751, 794, 921, 990, 1411, 1549, 1594
TatI	WGTACW	4 cut(s)	579, 736, 985, 1417
TauI	GCSGC	5 cut(s)	83, 145, 167, 223, 1659
TfiI	GAWTC	3 cut(s)	560, 1082, 1457
Tru1I	TTAA	4 cut(s)	309, 1151, 1247, 1463
Tru9I	TTAA	4 cut(s)	309, 1151, 1247, 1463
TscAI	CASTG	4 cut(s)	454, 1681, 1748, 1858
TseFI	GTSAC	2 cut(s)	452, 631
Tsp45I	GTSAC	2 cut(s)	452, 631
TspDTI	ATGAA	5 cut(s)	230, 491, 695, 1543, 1681
TspGWI	ACGGA	2 cut(s)	482, 1935
TspMI	CCCGGG	1 cut(s)	1125
TspRI	CASTG	4 cut(s)	454, 1681, 1748, 1858
Tth111I	GACNNNGTC	1 cut(s)	55
VpaK11BI	GGWCC	3 cut(s)	328, 391, 1606
XapI	RAATTY	4 cut(s)	751, 921, 1411, 1549
XceI	RCATGY	5 cut(s)	142, 842, 1382, 1580, 1750
XmaI	CCCGGG	1 cut(s)	1125
XmiI	GTMKAC	1 cut(s)	1686
XspI	CTAG	7 cut(s)	665, 1158, 1197, 1281, 1287, 1773, 1872
ZraI	GACGTC	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.