Rmu_sc0000078.1_g000051

Targeting protein for Xklp2 (TPX2)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000078.1
Physical Location & Seq
Reverse (-)
220301 .. 226132
5832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000078.1_g000051.1.cds

Sequence Viewer

Length: 1524 bp
atggggagggaaattactggtatgaaggaagagaagaaaattaatggtgttgtagtgggtaccaatggtttttctactgctaaactccatgtctctcccaaaatttccgagagaatcagcaggatcgagtccaaggagtacaaggtgaaggactctaatgaagagaaagcagctgagggggaaggtcttgagaagcaagatatgctggctgttaagagcacgaatcttgatgatgacttgaccaaggagaataatgagaaacctgaaactcagaagtcaagcgagagtttaaattccagctcaccagtttcaaaatctgctgctgttgaaaatgggcactcaaatcagactgttcctcatcccaatgctctggtaactgaaagggctggtacatgtgaagagactgctggggctgaagttgccacttcagaaaactccagcactgcagagtctcctaatgcaactaagacttcacagactgccaatgcagagtcacctactaagagttcagagccaaattcacctcggtcatcacgacctgatactaagaagcatgctgaggaagaagataattggtctcttacttcctcaactgctgcatctgtgagaacaaataaattcaaggttacagttggacaagctccttcgtttaaatgcagtgaacgcgcacaaaaaagaaatgagtactactcgaagttaaaggaaaaacaagaagctctggaggcagagagattgcagtacgaatcaaggaccagggaagagcaagaagcagccatcaagcagctgaggaagtccttggtgatcaaagcaaagccagtacctagtttctattatgagccacctcctcctaaggctgaactcaagaagcttccacttacgcggcccaagtcaccaaaactgaacagtctaagcaggagaaagagctttggtgatgctctcaacacatctcatgacgaaaagggaagagtttgtcctcgagcacatcgtcacagcgttggttgccagaaagaatgcactgcatcgactactccaaagaataaggtgcagaacagggtgcggctcttcgaactaatacgcttggtatcccctgcaactttgatccgcacagaagggctggtatatgcggtgatcggttacttggagaaccctagcaagcatgacgaacgcaacccctgccatgcagccaagctcaacccctgcaacgccgccgccacaggtcttgcctccgttgccaataccagtagcacttctgtctatataaccagcagtagcaatgccaccgcaaaaccagatcctaccttggtcgtcttccacagcagcacctctcccaccagtactcgacaccagcaaaaccccacgcagaacctaatcccatccttcagtgtcgaaagccgatcgggacatcaacccgatgcaatcacttccatcatccacgggtcgaatatcgagtccctccctcgcagccatcctcaacagagagtccgcatcaatatcatatcggtcccagaaccaccatcacaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

507

Amino Acids

55.47

Weight (kDa)

9.18

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 59
AccB1I GGYRCC 1 cut(s) 59
AccII CGCG 2 cut(s) 666, 880
AciI CCGC 8 cut(s) 880, 1057, 1102, 1124, 1206, 1209, 1281, 1483
AclWI GGATC 3 cut(s) 131, 1093, 1286
AcsI RAATTY 4 cut(s) 102, 292, 517, 617
AcuI CTGAAG 3 cut(s) 411, 435, 1363
AfaI GTAC 7 cut(s) 61, 140, 391, 686, 740, 819, 1336
AflIII ACRYGT 1 cut(s) 392
AgsI TTSAA 3 cut(s) 312, 329, 622
AjnI CCWGG 1 cut(s) 752
AluBI AGCT 8 cut(s) 173, 300, 641, 716, 784, 868, 924, 1189
AluI AGCT 8 cut(s) 173, 300, 641, 716, 784, 868, 924, 1189
Alw21I GWGCWC 2 cut(s) 221, 982
Alw26I GTCTC 4 cut(s) 97, 395, 456, 582
AlwI GGATC 3 cut(s) 131, 1093, 1286
Ama87I CYCGRG 1 cut(s) 975
AoxI GGCC 1 cut(s) 881
ApeKI GCWGC 8 cut(s) 170, 320, 596, 770, 781, 1181, 1317, 1461
ApoI RAATTY 4 cut(s) 102, 292, 517, 617
ArsI GACNNNNNNTTYG 2 cut(s) 1433, 1465
AseI ATTAAT 1 cut(s) 42
Asp718I GGTACC 1 cut(s) 59
AspLEI GCGC 1 cut(s) 668
AspS9I GGNCC 3 cut(s) 750, 882, 1501
AsuHPI GGTGA 8 cut(s) 157, 294, 486, 513, 811, 882, 941, 1138
AsuII TTCGAA 1 cut(s) 1065
AvaI CYCGRG 1 cut(s) 975
AvaII GGWCC 2 cut(s) 750, 1501
AxyI CCTNAGG 1 cut(s) 849
BaeGI GKGCMC 1 cut(s) 339
BanI GGYRCC 1 cut(s) 59
BbsI GAAGAC 1 cut(s) 1300
Bbv12I GWGCWC 2 cut(s) 221, 982
BbvCI CCTCAGC 3 cut(s) 174, 558, 785
BbvI GCAGC 8 cut(s) 182, 307, 583, 782, 793, 1193, 1329, 1473
BccI CCATC 5 cut(s) 782, 1381, 1433, 1473, 1522
BciT130I CCWGG 1 cut(s) 754
BciVI GTATCC 1 cut(s) 1093
BclI TGATCA 1 cut(s) 801
BcoDI GTCTC 4 cut(s) 97, 395, 456, 582
BfaI CTAG 2 cut(s) 822, 1149
BfmI CTRYAG 1 cut(s) 444
BfuI GTATCC 1 cut(s) 1093
BmcAI AGTACT 2 cut(s) 686, 1336
Bme1390I CCNGG 1 cut(s) 754
Bme18I GGWCC 2 cut(s) 750, 1501
BmeT110I CYCGRG 1 cut(s) 975
BmgT120I GGNCC 3 cut(s) 750, 882, 1501
BmiI GGNNCC 2 cut(s) 61, 1503
BmrFI CCNGG 1 cut(s) 754
BmsI GCATC 5 cut(s) 608, 922, 1028, 1402, 1494
BpiI GAAGAC 1 cut(s) 1300
BplI GAGNNNNNCTC 2 cut(s) 674, 706
BpmI CTGGAG 2 cut(s) 421, 740
Bpu10I CCTNAGC 3 cut(s) 174, 558, 785
Bpu14I TTCGAA 1 cut(s) 1065
BpuEI CTTGAG 2 cut(s) 209, 845
BsaI GGTCTC 1 cut(s) 582
BsaJI CCNNGG 7 cut(s) 132, 243, 524, 753, 795, 1299, 1432
Bse1I ACTGG 5 cut(s) 22, 305, 815, 1239, 1332
Bse21I CCTNAGG 1 cut(s) 849
Bse3DI GCAATG 1 cut(s) 1279
BseBI CCWGG 1 cut(s) 754
BseDI CCNNGG 7 cut(s) 132, 243, 524, 753, 795, 1299, 1432
BseGI GGATG 4 cut(s) 358, 1373, 1428, 1465
BseMI GCAATG 1 cut(s) 1279
BseMII CTCAG 4 cut(s) 165, 284, 549, 776
BseNI ACTGG 5 cut(s) 22, 305, 815, 1239, 1332
BseRI GAGGAG 1 cut(s) 834
BseSI GKGCMC 1 cut(s) 339
BseXI GCAGC 8 cut(s) 182, 307, 583, 782, 793, 1193, 1329, 1473
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 1 cut(s) 1064
Bsh1236I CGCG 2 cut(s) 666, 880
Bsh1285I CGRYCG 1 cut(s) 1397
BshFI GGCC 1 cut(s) 883
BshNI GGYRCC 1 cut(s) 59
BsiEI CGRYCG 1 cut(s) 1397
BsiHKAI GWGCWC 2 cut(s) 221, 982
BsiHKCI CYCGRG 1 cut(s) 975
BslFI GGGAC 3 cut(s) 1413, 1435, 1487
BsmAI GTCTC 4 cut(s) 97, 395, 456, 582
BsmFI GGGAC 3 cut(s) 1413, 1435, 1487
BsmI GAATGC 1 cut(s) 1016
BsnI GGCC 1 cut(s) 883
Bso31I GGTCTC 1 cut(s) 582
BsoBI CYCGRG 1 cut(s) 975
Bsp119I TTCGAA 1 cut(s) 1065
Bsp1286I GDGCHC 3 cut(s) 221, 339, 982
Bsp143I GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
BspACI CCGC 8 cut(s) 880, 1057, 1102, 1124, 1206, 1209, 1281, 1483
BspANI GGCC 1 cut(s) 883
BspCNI CTCAG 4 cut(s) 166, 283, 550, 777
BspFNI CGCG 2 cut(s) 666, 880
BspHI TCATGA 1 cut(s) 949
BspLI GGNNCC 2 cut(s) 61, 1503
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 3 cut(s) 131, 1093, 1286
BspQI GCTCTTC 2 cut(s) 753, 1067
BspT104I TTCGAA 1 cut(s) 1065
BspT107I GGYRCC 1 cut(s) 59
BspTNI GGTCTC 1 cut(s) 582
BsrDI GCAATG 1 cut(s) 1279
BsrI ACTGG 5 cut(s) 22, 305, 815, 1239, 1332
BssECI CCNNGG 7 cut(s) 132, 243, 524, 753, 795, 1299, 1432
BssMI GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
BssT1I CCWWGG 4 cut(s) 132, 243, 795, 1299
Bst2UI CCWGG 1 cut(s) 754
Bst4CI ACNGT 3 cut(s) 352, 631, 905
Bst6I CTCTTC 6 cut(s) 24, 156, 393, 753, 958, 1067
BstAPI GCANNNNNTGC 2 cut(s) 202, 1173
BstBI TTCGAA 1 cut(s) 1065
BstC8I GCNNGC 3 cut(s) 207, 555, 1154
BstDEI CTNAG 9 cut(s) 174, 270, 465, 501, 546, 558, 785, 849, 908
BstDSI CCRYGG 1 cut(s) 1432
BstF5I GGATG 4 cut(s) 358, 1373, 1428, 1465
BstFNI CGCG 2 cut(s) 666, 880
BstHHI GCGC 1 cut(s) 668
BstKTI GATC 6 cut(s) 126, 804, 1101, 1131, 1294, 1397
BstMAI GTCTC 4 cut(s) 97, 395, 456, 582
BstMBI GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
BstMCI CGRYCG 1 cut(s) 1397
BstMWI GCNNNNNNNGC 7 cut(s) 202, 419, 663, 722, 999, 1173, 1229
BstNI CCWGG 1 cut(s) 754
BstNSI RCATGY 2 cut(s) 396, 557
BstSCI CCNGG 1 cut(s) 752
BstSFI CTRYAG 1 cut(s) 444
BstSLI GKGCMC 1 cut(s) 339
BstUI CGCG 2 cut(s) 666, 880
BstV1I GCAGC 8 cut(s) 182, 307, 583, 782, 793, 1193, 1329, 1473
BstV2I GAAGAC 1 cut(s) 1300
BstX2I RGATCY 1 cut(s) 1291
BstXI CCANNNNNNTGG 1 cut(s) 370
BstYI RGATCY 1 cut(s) 1291
Bsu36I CCTNAGG 1 cut(s) 849
BsuI GTATCC 1 cut(s) 1093
BsuRI GGCC 1 cut(s) 883
BtgI CCRYGG 1 cut(s) 1432
BtsCI GGATG 4 cut(s) 358, 1373, 1428, 1465
BtsI GCAGTG 3 cut(s) 441, 664, 1014
BtsIMutI CAGTG 4 cut(s) 441, 664, 1014, 1387
Cac8I GCNNGC 3 cut(s) 207, 555, 1154
CciI TCATGA 1 cut(s) 949
CfoI GCGC 1 cut(s) 668
Cfr13I GGNCC 3 cut(s) 750, 882, 1501
Csp6I GTAC 7 cut(s) 60, 139, 390, 685, 739, 818, 1335
CspCI CAANNNNNGTGG 2 cut(s) 1201, 1236
CviAII CATG 6 cut(s) 89, 393, 554, 950, 1157, 1178
CviQI GTAC 7 cut(s) 60, 139, 390, 685, 739, 818, 1335
DdeI CTNAG 9 cut(s) 174, 270, 465, 501, 546, 558, 785, 849, 908
DpnI GATC 6 cut(s) 125, 803, 1100, 1130, 1293, 1396
DpnII GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
DraI TTTAAA 2 cut(s) 291, 652
Eam1104I CTCTTC 6 cut(s) 24, 156, 393, 753, 958, 1067
EarI CTCTTC 6 cut(s) 24, 156, 393, 753, 958, 1067
Eco130I CCWWGG 4 cut(s) 132, 243, 795, 1299
Eco31I GGTCTC 1 cut(s) 582
Eco47I GGWCC 2 cut(s) 750, 1501
Eco57I CTGAAG 3 cut(s) 411, 435, 1363
Eco81I CCTNAGG 1 cut(s) 849
Eco88I CYCGRG 1 cut(s) 975
EcoRII CCWGG 1 cut(s) 752
EcoT14I CCWWGG 4 cut(s) 132, 243, 795, 1299
ErhI CCWWGG 4 cut(s) 132, 243, 795, 1299
FaeI CATG 6 cut(s) 92, 396, 557, 953, 1160, 1181
FaqI GGGAC 3 cut(s) 1413, 1435, 1487
FatI CATG 6 cut(s) 88, 392, 553, 949, 1156, 1177
FbaI TGATCA 1 cut(s) 801
FokI GGATG 4 cut(s) 345, 1360, 1415, 1452
FspBI CTAG 2 cut(s) 822, 1149
GlaI GCGC 1 cut(s) 667
GsaI CCCAGC 1 cut(s) 411
GsuI CTGGAG 2 cut(s) 421, 740
HaeIII GGCC 1 cut(s) 883
HhaI GCGC 1 cut(s) 668
Hin1II CATG 6 cut(s) 92, 396, 557, 953, 1160, 1181
Hin6I GCGC 1 cut(s) 666
HinP1I GCGC 1 cut(s) 666
HindIII AAGCTT 1 cut(s) 866
HinfI GANTC 9 cut(s) 114, 128, 152, 223, 449, 491, 743, 1448, 1479
HphI GGTGA 8 cut(s) 157, 294, 486, 513, 811, 882, 941, 1138
Hpy166II GTNNAC 1 cut(s) 662
Hpy188I TCNGA 5 cut(s) 109, 273, 348, 430, 511
Hpy188III TCNNGA 7 cut(s) 188, 227, 534, 719, 862, 950, 1398
Hpy8I GTNNAC 1 cut(s) 662
HpyAV CCTTC 6 cut(s) 19, 142, 176, 654, 1103, 1387
HpyCH4III ACNGT 3 cut(s) 352, 631, 905
HpyF10VI GCNNNNNNNGC 7 cut(s) 202, 419, 663, 722, 999, 1173, 1229
HpyF3I CTNAG 9 cut(s) 174, 270, 465, 501, 546, 558, 785, 849, 908
Hsp92II CATG 6 cut(s) 92, 396, 557, 953, 1160, 1181
HspAI GCGC 1 cut(s) 666
KpnI GGTACC 1 cut(s) 63
Ksp22I TGATCA 1 cut(s) 801
Kzo9I GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
LguI GCTCTTC 2 cut(s) 753, 1067
LmnI GCTCC 1 cut(s) 646
Lsp1109I GCAGC 8 cut(s) 182, 307, 583, 782, 793, 1193, 1329, 1473
LweI GCATC 5 cut(s) 608, 922, 1028, 1402, 1494
MaeI CTAG 2 cut(s) 822, 1149
MaeIII GTNAC 6 cut(s) 373, 492, 625, 888, 986, 1133
MalI GATC 6 cut(s) 125, 803, 1100, 1130, 1293, 1396
MboI GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
MflI RGATCY 1 cut(s) 1291
MhlI GDGCHC 3 cut(s) 221, 339, 982
MluCI AATT 7 cut(s) 12, 39, 102, 292, 517, 571, 617
MlyI GAGTC 6 cut(s) 137, 146, 458, 500, 1457, 1488
MmeI TCCRAC 1 cut(s) 613
MseI TTAA 5 cut(s) 42, 213, 290, 651, 698
MslI CAYNNNNRTG 1 cut(s) 363
MspA1I CMGCKG 2 cut(s) 173, 784
MspR9I CCNGG 1 cut(s) 754
Mva1269I GAATGC 1 cut(s) 1016
MvaI CCWGG 1 cut(s) 754
MvnI CGCG 2 cut(s) 666, 880
MwoI GCNNNNNNNGC 7 cut(s) 202, 419, 663, 722, 999, 1173, 1229
NdeII GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
NlaIII CATG 6 cut(s) 92, 396, 557, 953, 1160, 1181
NlaIV GGNNCC 2 cut(s) 61, 1503
NmuCI GTSAC 3 cut(s) 492, 888, 986
NspI RCATGY 2 cut(s) 396, 557
NspV TTCGAA 1 cut(s) 1065
PaeI GCATGC 1 cut(s) 557
PaeR7I CTCGAG 1 cut(s) 975
PagI TCATGA 1 cut(s) 949
PciI ACATGT 1 cut(s) 392
PciSI GCTCTTC 2 cut(s) 753, 1067
PcsI WCGNNNNNNNCGW 2 cut(s) 532, 982
PctI GAATGC 1 cut(s) 1016
PfeI GAWTC 3 cut(s) 114, 223, 743
Ple19I CGATCG 1 cut(s) 1397
PleI GAGTC 6 cut(s) 136, 146, 457, 499, 1456, 1487
PpsI GAGTC 6 cut(s) 136, 146, 457, 499, 1456, 1487
PscI ACATGT 1 cut(s) 392
PshBI ATTAAT 1 cut(s) 42
Psp6I CCWGG 1 cut(s) 752
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 1 cut(s) 752
PspN4I GGNNCC 2 cut(s) 61, 1503
PspPI GGNCC 3 cut(s) 750, 882, 1501
PspXI VCTCGAGB 1 cut(s) 975
PstI CTGCAG 1 cut(s) 448
PsuI RGATCY 1 cut(s) 1291
PvuI CGATCG 1 cut(s) 1397
PvuII CAGCTG 2 cut(s) 173, 784
RsaI GTAC 7 cut(s) 61, 140, 391, 686, 740, 819, 1336
RsaNI GTAC 7 cut(s) 60, 139, 390, 685, 739, 818, 1335
RseI CAYNNNNRTG 1 cut(s) 363
SapI GCTCTTC 2 cut(s) 753, 1067
SaqAI TTAA 5 cut(s) 42, 213, 290, 651, 698
Sau3AI GATC 6 cut(s) 123, 801, 1098, 1128, 1291, 1394
Sau96I GGNCC 3 cut(s) 750, 882, 1501
ScaI AGTACT 2 cut(s) 686, 1336
SchI GAGTC 6 cut(s) 137, 146, 458, 500, 1457, 1488
ScrFI CCNGG 1 cut(s) 754
SduI GDGCHC 3 cut(s) 221, 339, 982
SfaNI GCATC 5 cut(s) 608, 922, 1028, 1402, 1494
SfcI CTRYAG 1 cut(s) 444
Sfr274I CTCGAG 1 cut(s) 975
SfuI TTCGAA 1 cut(s) 1065
SinI GGWCC 2 cut(s) 750, 1501
SlaI CTCGAG 1 cut(s) 975
SmiMI CAYNNNNRTG 1 cut(s) 363
SmlI CTYRAG 3 cut(s) 188, 860, 975
SmoI CTYRAG 3 cut(s) 188, 860, 975
SphI GCATGC 1 cut(s) 557
Sse9I AATT 7 cut(s) 12, 39, 102, 292, 517, 571, 617
SsiI CCGC 8 cut(s) 880, 1057, 1102, 1124, 1206, 1209, 1281, 1483
SspMI CTAG 2 cut(s) 822, 1149
StyD4I CCNGG 1 cut(s) 752
StyI CCWWGG 4 cut(s) 132, 243, 795, 1299
TaaI ACNGT 3 cut(s) 352, 631, 905
TaqI TCGA 9 cut(s) 126, 692, 976, 1022, 1065, 1339, 1386, 1439, 1446
TaqII GACCGA 2 cut(s) 516, 1489
TasI AATT 7 cut(s) 12, 39, 102, 292, 517, 571, 617
TatI WGTACW 3 cut(s) 138, 684, 1334
TauI GCSGC 4 cut(s) 883, 1060, 1208, 1211
TfiI GAWTC 3 cut(s) 114, 223, 743
Tru1I TTAA 5 cut(s) 42, 213, 290, 651, 698
Tru9I TTAA 5 cut(s) 42, 213, 290, 651, 698
TscAI CASTG 4 cut(s) 448, 664, 1021, 1387
TseFI GTSAC 3 cut(s) 492, 888, 986
TseI GCWGC 8 cut(s) 170, 320, 596, 770, 781, 1181, 1317, 1461
Tsp45I GTSAC 3 cut(s) 492, 888, 986
TspDTI ATGAA 2 cut(s) 38, 174
TspGWI ACGGA 1 cut(s) 1216
TspRI CASTG 4 cut(s) 448, 664, 1021, 1387
VpaK11BI GGWCC 2 cut(s) 750, 1501
VspI ATTAAT 1 cut(s) 42
XapI RAATTY 4 cut(s) 102, 292, 517, 617
XceI RCATGY 2 cut(s) 396, 557
XhoI CTCGAG 1 cut(s) 975
XspI CTAG 2 cut(s) 822, 1149
ZrmI AGTACT 2 cut(s) 686, 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.