Rmu_sc0000487.1_g000079

Domain of unknown function (DUF4487)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000487.1
OG0006689
Physical Location & Seq
Reverse (-)
331600 .. 338006
6407 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2955 bp
atggagggagggagctcagaattgcagagcatacaagacgccatcagatcctcagatgtggtggagaatcggattgaattacttaagaagcttggcgatttgaaaataacagagaagtctgaattggcttcccttgccgagtgtttgacagtggctgcgaagcacctagaatcagacacatccaactgtctagcacatttccttgtccttgggaccaaggcaagcatatggtgtggaaagcacctaaaaatgactcttatgtcaaccgaggaatctcaagaagaagagcacgagaacctgttctttcagctgtttctggatctgctgagctttttgagggcttgcttttcagctttggcaagataccctgtttctgttgagaagatgacagtggatgtagttgaaacattctttgatgaagagttaaacttgatcaaagattctatatcagagataaagagaattcagtcatttgtatcagaagaagtcgtagtaaaggttacacaggaggtcattgattctgtaataagattgtgtggagcatatgcccgagctttgaattgggagtcttgggaagaaaaactcgagagggataaaactgacatggactttgaaggggccaatagtatgaatcatgttattaatgtaacaaagtgtacaatagaaaaactatgtgagatgggcattattgcagctaataatggcggaagtctggtaccgattattaatatgtcgtggaaaggtgtggtcactttgcttcagctcggtgatggggtattagcaacaaaggtgaatgtagcagctctaatatcaaatctaatctcattggttaatgaatctataagacatgcagctgaggcatggttttcatcactgaaggaaaacatctctgtgtcagaagctagaaaggcatttcttcctataaagttttatttggttaatgcagtaaaaatatcttccctatacccatatcaagcatatctggtgcaaagtgagataacaaaatgtatcctgatgatttcaaccttaaagatttcattgagcaatgaaaacctgttaaaaactgccagtgatgttttcacagaactcttggagaagacatccttggatttgcttattgctctactgaactcagttcaagtgaagcgggagctcaaggttgagattctagactatctcttcggtgaaggaagctgcacaaattctgttgatggagatccgactacatgtggggaagcattgcccggagaaaggaccttcttgattggccgtgtttcattgtttcttaattttctgagattttctctcgatcttgacgacgatgtaaagcttgggattgctggaaagcttggttggttctttgatatgttagtaaatgaagaggtatattcttccattcttcttttgcaagttcctgtgctatatggttctggaaaaactgtggaagttgtctggcaacctttgttttcttctcttttgaatgcattgcaaatctacatgcttgtcgtttcttctggtcctgcttggagggagctggagtcttttcttcttgagaatttatttcacccccactttctttgctgggagattgtaatggaactttggtgctttatggttcgccatgctgagtctgggatggtgagtggcattgctggtaaactttgctcattaatgaagttggtggcatctactgaatccgttcttgtagctgattctgctctgagaaaagtggcaaggtcaatcagcataattcttacttttggtgcacaatctatggtagaccaggtttacatggccattgtacgtgatgagggaacccaattgtcatcagttatgcgtctggcgttgttcatggagggcttcccactgaatttactgtcagacaagatgaaaagaattgcgacgcaaaggataattactgattactgtctcttcgttgaaaattttgatgagaagtcaatgaaatctcttgattgtggtctttttggggccccagtttttgctttgtcagcttcgttgcagtctcttcagatcagcacatctgatatcaatgtgaagaccttgaagtttttagttgccatcattcataactacagagtttgtgaagatcagctaatgaaggaccagtaccgtaagcttctgagtgaaacattagtgatcatctcaaatatgaagcacctatatgcatctcttgaaatggagaaagtaatctgtgagcttgaaaacctgtttatctcgggacctgctgtttctgatacccaattgtatgaatgcaaaccagatctggctcttttcatggcaggccttgctcacatggatatcaaagaagctgatgaaagttccaagatctctgctctatgggatttgtatcacatgttattgggagagcggcactgggcatttattcatttggcaatttcagcatttggatacttttctgctcggacaaattgcaataagctctggagattcgtgcctcagaatgcagcgctttcctatgatctgacttctggaaatgaggccaatctggagcgatttatgtctgagttcaaggtttttcttgagaaggaaacggcacttctcacaataacggctagctctgaccagcttggtctgcttgtgagggagggtctaaaactaaaagaaatgttccaaaagatttcaaaagtcgtcgttgagactgcggaatgtgactacatggaaattgatggtgaaaagcaggccatggagatgaacggtggaaaacaatccaataggaaaaggaaatttcctgatggaattgaaaagggaatggaactgctacaaagtggtatgaaggttattgtggatagtatttctcagttgcagcaaaatgatcaacccagttccaatgaactacccgacaacttcttgaccaccttttctcgccttgaagctgaaatttctcaactagttggcctggctggtggtgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4487

Protein Analysis

984

Amino Acids

110.1

Weight (kDa)

4.97

Isoelectric Point (pI)

38.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4487 PF14868 241 - 821 1.5e-150 Domain of unknown function (DUF4487)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 259
Acc36I ACCTGC 1 cut(s) 2251
Acc65I GGTACC 1 cut(s) 715
AccB1I GGYRCC 1 cut(s) 715
AccBSI CCGCTC 1 cut(s) 2389
AccI GTMKAC 1 cut(s) 1779
AciI CCGC 4 cut(s) 705, 1147, 2389, 2684
AclWI GGATC 3 cut(s) 42, 327, 1211
AcoI YGGCCR 2 cut(s) 1267, 1794
AcsI RAATTY 7 cut(s) 462, 1201, 1555, 1870, 1942, 2765, 2919
AcuI CTGAAG 3 cut(s) 743, 896, 2012
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 4 cut(s) 658, 717, 1803, 2129
AfeI AGCGCT 1 cut(s) 2490
AfiI CCNNNNNNNGG 1 cut(s) 1251
AflII CTTAAG 1 cut(s) 83
AflIII ACRYGT 2 cut(s) 1226, 2373
AhlI ACTAGT 1 cut(s) 2929
AjnI CCWGG 2 cut(s) 1782, 2937
AjuI GAANNNNNNNTTGG 6 cut(s) 107, 139, 1088, 1120, 1336, 1368
Alw21I GWGCWC 4 cut(s) 17, 291, 1155, 1768
Alw26I GTCTC 3 cut(s) 1934, 2028, 2672
Alw44I GTGCAC 1 cut(s) 1764
AlwI GGATC 3 cut(s) 42, 327, 1211
AlwNI CAGNNNCTG 1 cut(s) 155
Ama87I CYCGRG 3 cut(s) 549, 584, 2236
Aor51HI AGCGCT 1 cut(s) 2490
AoxI GGCC 8 cut(s) 618, 1267, 1794, 1989, 2302, 2520, 2721, 2935
ApaI GGGCCC 1 cut(s) 1993
ApaLI GTGCAC 1 cut(s) 1764
ApeKI GCWGC 7 cut(s) 155, 692, 800, 851, 1194, 2486, 2845
ApoI RAATTY 7 cut(s) 462, 1201, 1555, 1870, 1942, 2765, 2919
ArsI GACNNNNNNTTYG 4 cut(s) 593, 625, 1163, 1195
AseI ATTAAT 3 cut(s) 642, 726, 1670
Asp700I GAANNNNTTC 2 cut(s) 299, 1698
Asp718I GGTACC 1 cut(s) 715
AspLEI GCGC 1 cut(s) 2491
AspS9I GGNCC 8 cut(s) 213, 618, 1254, 1517, 1989, 1990, 2122, 2240
AsuC2I CCSGG 1 cut(s) 1245
AsuHPI GGTGA 6 cut(s) 779, 802, 1196, 1556, 1651, 2723
AsuNHI GCTAGC 1 cut(s) 2594
AvaI CYCGRG 3 cut(s) 549, 584, 2236
AvaII GGWCC 5 cut(s) 213, 1254, 1517, 2122, 2240
BaeGI GKGCMC 2 cut(s) 1768, 1993
BalI TGGCCA 1 cut(s) 1796
BanI GGYRCC 1 cut(s) 715
BanII GRGCYC 3 cut(s) 17, 1155, 1993
BarI GAAGNNNNNNTAC 2 cut(s) 2111, 2143
BauI CACGAG 1 cut(s) 290
BbsI GAAGAC 2 cut(s) 1103, 2063
Bbv12I GWGCWC 4 cut(s) 17, 291, 1155, 1768
BbvCI CCTCAGC 1 cut(s) 855
BbvI GCAGC 7 cut(s) 142, 704, 812, 863, 1181, 2498, 2857
BccI CCATC 8 cut(s) 50, 673, 764, 1205, 1630, 2087, 2702, 2768
BceAI ACGGC 3 cut(s) 1254, 2589, 2607
BciT130I CCWGG 2 cut(s) 1784, 2939
BciVI GTATCC 2 cut(s) 1019, 2423
BclI TGATCA 3 cut(s) 432, 2157, 2854
BcnI CCSGG 1 cut(s) 1245
BcoDI GTCTC 3 cut(s) 1934, 2028, 2672
BcuI ACTAGT 1 cut(s) 2929
BfaI CTAG 6 cut(s) 167, 191, 903, 1169, 2595, 2930
BfmI CTRYAG 1 cut(s) 2092
BfoI RGCGCY 1 cut(s) 2492
BfrI CTTAAG 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 2251
BfuI GTATCC 2 cut(s) 1019, 2423
BglII AGATCT 2 cut(s) 2281, 2346
BisI GCNGC 8 cut(s) 156, 693, 801, 852, 1195, 2390, 2487, 2846
BlpI GCTNAGC 1 cut(s) 326
BlsI GCNGC 8 cut(s) 157, 694, 802, 853, 1196, 2391, 2488, 2847
Bme1390I CCNGG 3 cut(s) 1245, 1784, 2939
Bme18I GGWCC 5 cut(s) 213, 1254, 1517, 2122, 2240
BmeT110I CYCGRG 3 cut(s) 549, 584, 2236
BmgT120I GGNCC 8 cut(s) 213, 618, 1254, 1517, 1989, 1990, 2122, 2240
BmiI GGNNCC 8 cut(s) 214, 619, 717, 1816, 1990, 1991, 1992, 2241
BmrFI CCNGG 3 cut(s) 1245, 1784, 2939
BmrI ACTGGG 3 cut(s) 1988, 2404, 2856
BmsI GCATC 2 cut(s) 1694, 2195
BmtI GCTAGC 1 cut(s) 2598
BmuI ACTGGG 3 cut(s) 1988, 2404, 2856
BpiI GAAGAC 2 cut(s) 1103, 2063
BplI GAGNNNNNCTC 2 cut(s) 1288, 1320
BpmI CTGGAG 3 cut(s) 1556, 2485, 2549
Bpu10I CCTNAGC 1 cut(s) 855
Bpu1102I GCTNAGC 1 cut(s) 326
BpuEI CTTGAG 4 cut(s) 261, 1139, 1571, 2582
BpuMI CCSGG 1 cut(s) 1245
BsaAI YACGTR 1 cut(s) 1805
BsaBI GATNNNNATC 2 cut(s) 1215, 2367
BsaHI GRCGYC 1 cut(s) 39
BsaJI CCNNGG 5 cut(s) 208, 216, 267, 1104, 2724
BsaXI ACNNNNNCTCC 2 cut(s) 1523, 1553
Bsc4I CCNNNNNNNGG 1 cut(s) 1251
Bse1I ACTGG 5 cut(s) 1068, 1994, 2125, 2399, 2862
Bse3DI GCAATG 4 cut(s) 1051, 1238, 1484, 1647
Bse8I GATNNNNATC 2 cut(s) 1215, 2367
BseBI CCWGG 2 cut(s) 1784, 2939
BseDI CCNNGG 5 cut(s) 208, 216, 267, 1104, 2724
BseGI GGATG 4 cut(s) 179, 400, 1100, 1641
BseJI GATNNNNATC 2 cut(s) 1215, 2367
BseLI CCNNNNNNNGG 1 cut(s) 1251
BseMI GCAATG 4 cut(s) 1051, 1238, 1484, 1647
BseNI ACTGG 5 cut(s) 1068, 1994, 2125, 2399, 2862
BseSI GKGCMC 2 cut(s) 1768, 1993
BseXI GCAGC 7 cut(s) 142, 704, 812, 863, 1181, 2498, 2857
BseYI CCCAGC 1 cut(s) 1581
BsgI GTGCAG 1 cut(s) 1180
BshFI GGCC 8 cut(s) 620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BshNI GGYRCC 1 cut(s) 715
BsiHKAI GWGCWC 4 cut(s) 17, 291, 1155, 1768
BsiHKCI CYCGRG 3 cut(s) 549, 584, 2236
BsiSI CCGG 1 cut(s) 1245
BslFI GGGAC 2 cut(s) 226, 2253
BslI CCNNNNNNNGG 1 cut(s) 1251
BsmAI GTCTC 3 cut(s) 1934, 2028, 2672
BsmFI GGGAC 2 cut(s) 226, 2253
BsmI GAATGC 3 cut(s) 1486, 2276, 2488
BsnI GGCC 8 cut(s) 620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BsoBI CYCGRG 3 cut(s) 549, 584, 2236
Bsp120I GGGCCC 1 cut(s) 1989
Bsp1286I GDGCHC 5 cut(s) 17, 291, 1155, 1768, 1993
Bsp1407I TGTACA 1 cut(s) 656
Bsp1720I GCTNAGC 1 cut(s) 326
Bsp19I CCATGG 1 cut(s) 2724
BspACI CCGC 4 cut(s) 705, 1147, 2389, 2684
BspANI GGCC 8 cut(s) 620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BspLI GGNNCC 8 cut(s) 214, 619, 717, 1816, 1990, 1991, 1992, 2241
BspMI ACCTGC 1 cut(s) 2251
BspOI GCTAGC 1 cut(s) 2598
BspPI GGATC 3 cut(s) 42, 327, 1211
BspQI GCTCTTC 1 cut(s) 279
BspT107I GGYRCC 1 cut(s) 715
BspTI CTTAAG 1 cut(s) 83
BsrBI CCGCTC 1 cut(s) 2389
BsrDI GCAATG 4 cut(s) 1051, 1238, 1484, 1647
BsrGI TGTACA 1 cut(s) 656
BsrI ACTGG 5 cut(s) 1068, 1994, 2125, 2399, 2862
BssECI CCNNGG 5 cut(s) 208, 216, 267, 1104, 2724
BssNI GRCGYC 1 cut(s) 39
BssSI CACGAG 1 cut(s) 290
BssT1I CCWWGG 4 cut(s) 208, 216, 1104, 2724
Bst2BI CACGAG 1 cut(s) 290
Bst2UI CCWGG 2 cut(s) 1784, 2939
Bst4CI ACNGT 8 cut(s) 151, 188, 391, 1441, 1878, 1928, 2132, 2738
Bst6I CTCTTC 6 cut(s) 279, 414, 1184, 1374, 1937, 2031
BstACI GRCGYC 1 cut(s) 39
BstAFI CTTAAG 1 cut(s) 83
BstAPI GCANNNNNTGC 1 cut(s) 2306
BstAUI TGTACA 1 cut(s) 656
BstBAI YACGTR 1 cut(s) 1805
BstC8I GCNNGC 5 cut(s) 223, 343, 2302, 2596, 2721
BstDSI CCRYGG 1 cut(s) 2724
BstF5I GGATG 4 cut(s) 179, 400, 1100, 1641
BstH2I RGCGCY 1 cut(s) 2492
BstHHI GCGC 1 cut(s) 2491
BstMAI GTCTC 3 cut(s) 1934, 2028, 2672
BstMWI GCNNNNNNNGC 8 cut(s) 134, 857, 908, 1715, 2009, 2306, 2420, 2614
BstNI CCWGG 2 cut(s) 1784, 2939
BstNSI RCATGY 4 cut(s) 851, 1230, 1501, 2377
BstSCI CCNGG 3 cut(s) 1243, 1782, 2937
BstSFI CTRYAG 1 cut(s) 2092
BstSLI GKGCMC 2 cut(s) 1768, 1993
BstV1I GCAGC 7 cut(s) 142, 704, 812, 863, 1181, 2498, 2857
BstV2I GAAGAC 2 cut(s) 1103, 2063
BstX2I RGATCY 5 cut(s) 47, 319, 1216, 2281, 2346
BstYI RGATCY 5 cut(s) 47, 319, 1216, 2281, 2346
BsuI GTATCC 2 cut(s) 1019, 2423
BsuRI GGCC 8 cut(s) 620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BtgI CCRYGG 1 cut(s) 2724
BtsCI GGATG 4 cut(s) 179, 400, 1100, 1641
BtsIMutI CAGTG 6 cut(s) 156, 396, 872, 1075, 1865, 2392
BveI ACCTGC 1 cut(s) 2251
Cac8I GCNNGC 5 cut(s) 223, 343, 2302, 2596, 2721
CaiI CAGNNNCTG 1 cut(s) 155
CfoI GCGC 1 cut(s) 2491
Cfr13I GGNCC 8 cut(s) 213, 618, 1254, 1517, 1989, 1990, 2122, 2240
CseI GACGC 3 cut(s) 47, 1826, 1912
CsiI ACCWGGT 1 cut(s) 1782
Csp6I GTAC 4 cut(s) 657, 716, 1802, 2128
CspCI CAANNNNNGTGG 2 cut(s) 1559, 1594
CviQI GTAC 4 cut(s) 657, 716, 1802, 2128
DrdI GACNNNNNNGTC 1 cut(s) 259
DseDI GACNNNNNNGTC 1 cut(s) 259
EaeI YGGCCR 2 cut(s) 1267, 1794
Eam1104I CTCTTC 6 cut(s) 279, 414, 1184, 1374, 1937, 2031
EarI CTCTTC 6 cut(s) 279, 414, 1184, 1374, 1937, 2031
EciI GGCGGA 1 cut(s) 720
Ecl136II GAGCTC 2 cut(s) 15, 1153
Eco130I CCWWGG 4 cut(s) 208, 216, 1104, 2724
Eco147I AGGCCT 1 cut(s) 2304
Eco24I GRGCYC 3 cut(s) 17, 1155, 1993
Eco32I GATATC 2 cut(s) 2047, 2320
Eco47I GGWCC 5 cut(s) 213, 1254, 1517, 2122, 2240
Eco47III AGCGCT 1 cut(s) 2490
Eco53kI GAGCTC 2 cut(s) 15, 1153
Eco57I CTGAAG 3 cut(s) 743, 896, 2012
Eco88I CYCGRG 3 cut(s) 549, 584, 2236
EcoICRI GAGCTC 2 cut(s) 15, 1153
EcoO109I RGGNCCY 4 cut(s) 1254, 1989, 1990, 2240
EcoRI GAATTC 1 cut(s) 462
EcoRII CCWGG 2 cut(s) 1782, 2937
EcoRV GATATC 2 cut(s) 2047, 2320
EcoT14I CCWWGG 4 cut(s) 208, 216, 1104, 2724
EcoT22I ATGCAT 2 cut(s) 1486, 2188
EcoT38I GRGCYC 3 cut(s) 17, 1155, 1993
ErhI CCWWGG 4 cut(s) 208, 216, 1104, 2724
FalI AAGNNNNNCTT 2 cut(s) 1088, 1120
FaqI GGGAC 2 cut(s) 226, 2253
FauI CCCGC 1 cut(s) 1140
FauNDI CATATG 2 cut(s) 227, 544
FbaI TGATCA 3 cut(s) 432, 2157, 2854
FblI GTMKAC 1 cut(s) 1779
Fnu4HI GCNGC 8 cut(s) 156, 693, 801, 852, 1195, 2390, 2487, 2846
FokI GGATG 4 cut(s) 166, 407, 1087, 1648
FriOI GRGCYC 3 cut(s) 17, 1155, 1993
Fsp4HI GCNGC 8 cut(s) 156, 693, 801, 852, 1195, 2390, 2487, 2846
FspBI CTAG 6 cut(s) 167, 191, 903, 1169, 2595, 2930
GlaI GCGC 1 cut(s) 2490
GluI GCNGC 8 cut(s) 156, 693, 801, 852, 1195, 2390, 2487, 2846
GsaI CCCAGC 1 cut(s) 1585
GsuI CTGGAG 3 cut(s) 1556, 2485, 2549
HaeII RGCGCY 1 cut(s) 2492
HaeIII GGCC 8 cut(s) 620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
HapII CCGG 1 cut(s) 1245
HgaI GACGC 3 cut(s) 47, 1826, 1912
HhaI GCGC 1 cut(s) 2491
Hin1I GRCGYC 1 cut(s) 39
Hin6I GCGC 1 cut(s) 2489
HinP1I GCGC 1 cut(s) 2489
HincII GTYRAC 1 cut(s) 264
HindII GTYRAC 1 cut(s) 264
HindIII AAGCTT 4 cut(s) 89, 1328, 1346, 2135
HpaII CCGG 1 cut(s) 1245
HphI GGTGA 6 cut(s) 779, 802, 1196, 1556, 1651, 2723
Hpy166II GTNNAC 6 cut(s) 264, 657, 1658, 1766, 1780, 1789
Hpy8I GTNNAC 6 cut(s) 264, 657, 1658, 1766, 1780, 1789
Hpy99I CGWCG 3 cut(s) 1322, 1906, 2675
HpyAV CCTTC 7 cut(s) 608, 871, 1181, 1267, 2113, 2560, 2809
HpyCH4III ACNGT 8 cut(s) 151, 188, 391, 1441, 1878, 1928, 2132, 2738
HpyCH4IV ACGT 1 cut(s) 1804
HpyF10VI GCNNNNNNNGC 8 cut(s) 134, 857, 908, 1715, 2009, 2306, 2420, 2614
HpySE526I ACGT 1 cut(s) 1804
Hsp92I GRCGYC 1 cut(s) 39
HspAI GCGC 1 cut(s) 2489
KpnI GGTACC 1 cut(s) 719
Ksp22I TGATCA 3 cut(s) 432, 2157, 2854
LguI GCTCTTC 1 cut(s) 279
LmnI GCTCC 5 cut(s) 12, 539, 1150, 1531, 2530
Lsp1109I GCAGC 7 cut(s) 142, 704, 812, 863, 1181, 2498, 2857
LweI GCATC 2 cut(s) 1694, 2195
MabI ACCWGGT 1 cut(s) 1782
MaeI CTAG 6 cut(s) 167, 191, 903, 1169, 2595, 2930
MaeII ACGT 1 cut(s) 1804
MaeIII GTNAC 4 cut(s) 499, 646, 748, 2690
MbiI CCGCTC 1 cut(s) 2389
MfeI CAATTG 2 cut(s) 1820, 2261
MflI RGATCY 5 cut(s) 47, 319, 1216, 2281, 2346
MhlI GDGCHC 5 cut(s) 17, 291, 1155, 1768, 1993
MlsI TGGCCA 1 cut(s) 1796
MluNI TGGCCA 1 cut(s) 1796
MlyI GAGTC 4 cut(s) 247, 575, 1547, 1637
MmeI TCCRAC 2 cut(s) 207, 1244
Mox20I TGGCCA 1 cut(s) 1796
Mph1103I ATGCAT 2 cut(s) 1486, 2188
MroXI GAANNNNTTC 2 cut(s) 299, 1698
MscI TGGCCA 1 cut(s) 1796
MslI CAYNNNNRTG 3 cut(s) 890, 2181, 2729
Msp20I TGGCCA 1 cut(s) 1796
MspA1I CMGCKG 2 cut(s) 310, 854
MspCI CTTAAG 1 cut(s) 83
MspI CCGG 1 cut(s) 1245
MspR9I CCNGG 3 cut(s) 1245, 1784, 2939
MunI CAATTG 2 cut(s) 1820, 2261
Mva1269I GAATGC 3 cut(s) 1486, 2276, 2488
MvaI CCWGG 2 cut(s) 1784, 2939
MwoI GCNNNNNNNGC 8 cut(s) 134, 857, 908, 1715, 2009, 2306, 2420, 2614
NciI CCSGG 1 cut(s) 1245
NcoI CCATGG 1 cut(s) 2724
NdeI CATATG 2 cut(s) 227, 544
NheI GCTAGC 1 cut(s) 2594
NlaIV GGNNCC 8 cut(s) 214, 619, 717, 1816, 1990, 1991, 1992, 2241
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 2 cut(s) 748, 2690
NsiI ATGCAT 2 cut(s) 1486, 2188
NspI RCATGY 4 cut(s) 851, 1230, 1501, 2377
PaeR7I CTCGAG 1 cut(s) 584
PceI AGGCCT 1 cut(s) 2304
PciI ACATGT 2 cut(s) 1226, 2373
PciSI GCTCTTC 1 cut(s) 279
PcsI WCGNNNNNNNCGW 1 cut(s) 1314
PctI GAATGC 3 cut(s) 1486, 2276, 2488
PdmI GAANNNNTTC 2 cut(s) 299, 1698
PkrI GCNGC 8 cut(s) 157, 694, 802, 853, 1196, 2391, 2488, 2847
PleI GAGTC 4 cut(s) 247, 574, 1546, 1636
PpsI GAGTC 4 cut(s) 247, 574, 1546, 1636
Ppu21I YACGTR 1 cut(s) 1805
PpuMI RGGWCCY 2 cut(s) 1254, 2240
PscI ACATGT 2 cut(s) 1226, 2373
PshBI ATTAAT 3 cut(s) 642, 726, 1670
Psp124BI GAGCTC 2 cut(s) 17, 1155
Psp5II RGGWCCY 2 cut(s) 1254, 2240
Psp6I CCWGG 2 cut(s) 1782, 2937
PspFI CCCAGC 1 cut(s) 1581
PspGI CCWGG 2 cut(s) 1782, 2937
PspN4I GGNNCC 8 cut(s) 214, 619, 717, 1816, 1990, 1991, 1992, 2241
PspOMI GGGCCC 1 cut(s) 1989
PspPI GGNCC 8 cut(s) 213, 618, 1254, 1517, 1989, 1990, 2122, 2240
PspPPI RGGWCCY 2 cut(s) 1254, 2240
PstNI CAGNNNCTG 1 cut(s) 155
PsuI RGATCY 5 cut(s) 47, 319, 1216, 2281, 2346
PvuII CAGCTG 2 cut(s) 310, 854
RsaI GTAC 4 cut(s) 658, 717, 1803, 2129
RsaNI GTAC 4 cut(s) 657, 716, 1802, 2128
RseI CAYNNNNRTG 3 cut(s) 890, 2181, 2729
SacI GAGCTC 2 cut(s) 17, 1155
SapI GCTCTTC 1 cut(s) 279
SatI GCNGC 8 cut(s) 156, 693, 801, 852, 1195, 2390, 2487, 2846
Sau96I GGNCC 8 cut(s) 213, 618, 1254, 1517, 1989, 1990, 2122, 2240
SchI GAGTC 4 cut(s) 247, 575, 1547, 1637
ScrFI CCNGG 3 cut(s) 1245, 1784, 2939
SduI GDGCHC 5 cut(s) 17, 291, 1155, 1768, 1993
SexAI ACCWGGT 1 cut(s) 1782
SfaNI GCATC 2 cut(s) 1694, 2195
SfcI CTRYAG 1 cut(s) 2092
Sfr274I CTCGAG 1 cut(s) 584
SinI GGWCC 5 cut(s) 213, 1254, 1517, 2122, 2240
SlaI CTCGAG 1 cut(s) 584
SmiMI CAYNNNNRTG 3 cut(s) 890, 2181, 2729
SmlI CTYRAG 6 cut(s) 83, 276, 584, 1154, 1550, 2561
SmoI CTYRAG 6 cut(s) 83, 276, 584, 1154, 1550, 2561
SpeI ACTAGT 1 cut(s) 2929
SseBI AGGCCT 1 cut(s) 2304
SsiI CCGC 4 cut(s) 705, 1147, 2389, 2684
SspMI CTAG 6 cut(s) 167, 191, 903, 1169, 2595, 2930
SstI GAGCTC 2 cut(s) 17, 1155
StuI AGGCCT 1 cut(s) 2304
StyD4I CCNGG 3 cut(s) 1243, 1782, 2937
StyI CCWWGG 4 cut(s) 208, 216, 1104, 2724
TaaI ACNGT 8 cut(s) 151, 188, 391, 1441, 1878, 1928, 2132, 2738
TaiI ACGT 1 cut(s) 1807
TaqI TCGA 2 cut(s) 585, 1308
TatI WGTACW 1 cut(s) 656
TauI GCSGC 1 cut(s) 2392
TscAI CASTG 6 cut(s) 156, 396, 879, 1075, 1872, 2399
TseFI GTSAC 2 cut(s) 748, 2690
TseI GCWGC 7 cut(s) 155, 692, 800, 851, 1194, 2486, 2845
Tsp45I GTSAC 2 cut(s) 748, 2690
TspGWI ACGGA 1 cut(s) 1687
TspRI CASTG 6 cut(s) 156, 396, 879, 1075, 1872, 2399
Vha464I CTTAAG 1 cut(s) 83
VneI GTGCAC 1 cut(s) 1764
VpaK11BI GGWCC 5 cut(s) 213, 1254, 1517, 2122, 2240
VspI ATTAAT 3 cut(s) 642, 726, 1670
XapI RAATTY 7 cut(s) 462, 1201, 1555, 1870, 1942, 2765, 2919
XbaI TCTAGA 1 cut(s) 1168
XceI RCATGY 4 cut(s) 851, 1230, 1501, 2377
XcmI CCANNNNNNNNNTGG 1 cut(s) 1628
XhoI CTCGAG 1 cut(s) 584
XmiI GTMKAC 1 cut(s) 1779
XmnI GAANNNNTTC 2 cut(s) 299, 1698
XspI CTAG 6 cut(s) 167, 191, 903, 1169, 2595, 2930
Zsp2I ATGCAT 2 cut(s) 1486, 2188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.