Rmu_sc0000597.1_g000001

DNA gyrase subunit A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000597.1
OG0010284
Physical Location & Seq
Reverse (-)
1 .. 12408
12408 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2274 bp
atggccttagcctccggtctccgcctctcttcctctatcctccgttaccgcctccctgcaccgctcaactccacccgcttctgcggcctccgccacagcctctccgacctccgtttcctctcagcttcctcctctcgtactaggccccagctccgctccatcaaagcgaggccccgcgacgacgacgacgacctcctcgcaggcggcgaggggcagaatgggaatgggagcgtccttgtcaaggactcagacgagagaatcgttcgtgttgagctccacaaggaggccaccgatgcctacatggcctatgctatgtctgtactgctcggccgtgccctgccggacgttcgcgacggtctcaagccagtgcaccgccgcattctgtatgcaatgcatgaattgaggctttcgtcccgaaaaccattcgtgaaatgtgctagagttgttggagaggttctaggaaagtttcatcctcatggagacactgctgtgtatgattccttggtgcgaatggctcaggatttctctttacgatccccactgattcaagggcatgggaattttggttcaattgatgctgatcctgcagctgccatgcgttacacagagtgcagattggaggcgctgaccgaagcaatgttgctgtcagatttagaacaggatacggttgattttgttccaaactttgataattcacaaaaagagccatcacttttacctgctcgccttccaaatttattattgaatggttcttcagggattgcggttggcatggcaacaaatatccctccgcataatcttggggaattggtggatgttctcagtgtgttgattcataatccagaagctacactgcaagaattgctggaatacatgccaggacctgattttccaactggaggagtgattatgggcaaccttggtatcttagaggcatatcgaactgggagaggacgtattgtggtcagaggaaaaactgatatagaatctcttgattctaaaggcaagcgaagtgcaatcatcataaaggaggtcccttaccaaactaacaaagcagctctggtggagaagattgcacaacttgtagaggataagattttagatggcattagtgatattagggatgagagtgaccgcactggaatgcgtgtagtgattgagctcaagcgaggatccgacccatctattgttctgaataatctatatcgcctcacatctctccagtccagcttcagctgtaacatggttggtattctcaacggtcaacctaaactgatgggtctaaaggaattgctgcaggcattcctagacttcagatgctctgttattgagagacgtgctaaattcaaactttcacaagcacaggacagaagacatattgttgagggtattgctgtaggccttgataatttgcaaagagtaatgcgtataagtttggaagcttctaataatgcaattgcatcatctcttctaagaaatgagttcaacctttctgagaaacaagctgaggcaatattagacttcaacttcagaaggcttaatgttatggagaggaaaaagtttgataatgaaagtgaatcgttgaaagagcaaatttcaaaattagaagaactattgtcaagcaaaaaacatatattacaggtggttgaacaagaagcaattgacataaaaaccaagtttgctagtcacaggcgttcgatgctggaggaaactgatggtggtcaacttgatgatattgatgttattccaaatgatgaaatgcttttggccttcagtgaaaaggggtatgttaagcggatgaagcccaacacgtttaatttgcaaaatcgaggtaccattggtaaatctgttgggaaattgagggtaaacgatgcaatgtcagactttattgtttgtcacgcacatgatcatgttttgtacttcagtgataaaggaacagtctactcagctcgtgcatataaaattcctgagtgcagccgcacagcagctggtacgccactggttcagatcttatctctgtcagatggcgagagaattacatctgttattcctgtgagtgagtttgctggagatcagtttttactaatgcttacagtgaatggctacataaagaaggtgtctttgagttctttttcatcaatcaggtcgaccggaatcatagcaattcaactggtccctggtgatgagctgaaatgggtccgttgctgcacaaatgatgaccttgtagcgatggcatccctaaacggaatggtcatcttatgttcgtctgatatt

Protein Analysis

758

Amino Acids

83.97

Weight (kDa)

6.96

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_topoisoIV PF00521 111 - 552 2.2e-156 DNA gyrase/topoisomerase IV, subunit A
DNA_gyraseA_C PF03989 586 - 632 1.9e-08 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C PF03989 636 - 686 2.7e-07 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C PF03989 693 - 736 3e-08 DNA gyrase C-terminal domain, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 727
Acc65I GGTACC 1 cut(s) 1832
AccB1I GGYRCC 1 cut(s) 1832
AccBSI CCGCTC 2 cut(s) 64, 156
AccI GTMKAC 2 cut(s) 1941, 2147
AccII CGCG 2 cut(s) 177, 351
AclWI GGATC 4 cut(s) 528, 575, 1167, 1180
AcoI YGGCCR 1 cut(s) 328
AcsI RAATTY 5 cut(s) 559, 733, 1343, 1593, 1962
AcuI CTGAAG 6 cut(s) 738, 1216, 1297, 1513, 1756, 1906
AdeI CACNNNGTG 1 cut(s) 609
AfaI GTAC 5 cut(s) 139, 321, 1834, 1919, 1993
AfiI CCNNNNNNNGG 3 cut(s) 241, 283, 899
AflIII ACRYGT 1 cut(s) 1809
AjiI CACGTC 1 cut(s) 1337
AjnI CCWGG 2 cut(s) 877, 2176
AleI CACNNNNGTG 1 cut(s) 488
AloI GAACNNNNNNTCC 2 cut(s) 550, 582
Alw21I GWGCWC 3 cut(s) 276, 372, 1164
Alw26I GTCTC 4 cut(s) 23, 362, 474, 1327
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 4 cut(s) 528, 575, 1167, 1180
AlwNI CAGNNNCTG 2 cut(s) 884, 1988
AoxI GGCC 9 cut(s) 3, 85, 143, 170, 285, 303, 328, 1399, 1767
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 7 cut(s) 587, 590, 1055, 1294, 1974, 1985, 2205
ApoI RAATTY 5 cut(s) 559, 733, 1343, 1593, 1962
Asp718I GGTACC 1 cut(s) 1832
AspLEI GCGC 1 cut(s) 625
AspS9I GGNCC 6 cut(s) 144, 171, 881, 1033, 2173, 2197
AsuHPI GGTGA 1 cut(s) 2192
AvaII GGWCC 4 cut(s) 881, 1033, 2173, 2197
BaeGI GKGCMC 2 cut(s) 337, 372
BaeI ACNNNNGTAYC 2 cut(s) 907, 940
BamHI GGATCC 1 cut(s) 1172
BanI GGYRCC 1 cut(s) 1832
BanII GRGCYC 2 cut(s) 276, 1164
BauI CACGAG 1 cut(s) 1950
BbsI GAAGAC 1 cut(s) 1378
Bbv12I GWGCWC 3 cut(s) 276, 372, 1164
BbvCI CCTCAGC 1 cut(s) 1506
BbvI GCAGC 7 cut(s) 577, 599, 1067, 1281, 1986, 1997, 2192
BccI CCATC 8 cut(s) 167, 715, 1097, 1189, 1270, 1709, 2018, 2224
BceAI ACGGC 1 cut(s) 315
BciT130I CCWGG 2 cut(s) 879, 2178
BciVI GTATCC 1 cut(s) 655
BclI TGATCA 1 cut(s) 1906
BcoDI GTCTC 4 cut(s) 23, 362, 474, 1327
BfaI CTAG 5 cut(s) 141, 438, 458, 1307, 1683
BfmI CTRYAG 3 cut(s) 585, 1295, 1395
BfoI RGCGCY 1 cut(s) 626
BfuAI ACCTGC 1 cut(s) 727
BfuI GTATCC 1 cut(s) 655
BglI GCCNNNNNGGC 1 cut(s) 302
BglII AGATCT 1 cut(s) 2007
Bme1390I CCNGG 2 cut(s) 879, 2178
Bme18I GGWCC 4 cut(s) 881, 1033, 2173, 2197
BmgBI CACGTC 1 cut(s) 1337
BmgT120I GGNCC 6 cut(s) 144, 171, 881, 1033, 2173, 2197
BmiI GGNNCC 7 cut(s) 146, 173, 1035, 1174, 1834, 2175, 2198
BmrFI CCNGG 2 cut(s) 879, 2178
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 7 cut(s) 283, 565, 1307, 1469, 1689, 1861, 2243
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 1 cut(s) 1378
BpmI CTGGAG 4 cut(s) 918, 1205, 1724, 2088
Bpu10I CCTNAGC 3 cut(s) 7, 516, 1506
BpuEI CTTGAG 2 cut(s) 344, 1148
BsaBI GATNNNNATC 1 cut(s) 579
BsaI GGTCTC 2 cut(s) 23, 362
BsaJI CCNNGG 3 cut(s) 501, 919, 2176
BsaWI WCCGGW 2 cut(s) 14, 2150
BsaXI ACNNNNNCTCC 4 cut(s) 86, 116, 940, 970
Bsc4I CCNNNNNNNGG 3 cut(s) 241, 283, 899
Bse1I ACTGG 7 cut(s) 365, 901, 949, 1144, 1222, 2004, 2175
Bse3DI GCAATG 3 cut(s) 396, 642, 1881
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 2 cut(s) 879, 2178
BseDI CCNNGG 3 cut(s) 501, 919, 2176
BseGI GGATG 5 cut(s) 469, 820, 1129, 1803, 2234
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 3 cut(s) 241, 283, 899
BseMI GCAATG 3 cut(s) 396, 642, 1881
BseMII CTCAG 8 cut(s) 135, 261, 530, 835, 1485, 1497, 1959, 1959
BseNI ACTGG 7 cut(s) 365, 901, 949, 1144, 1222, 2004, 2175
BseRI GAGGAG 3 cut(s) 121, 185, 915
BseSI GKGCMC 2 cut(s) 337, 372
BseX3I CGGCCG 1 cut(s) 328
BseXI GCAGC 7 cut(s) 577, 599, 1067, 1281, 1986, 1997, 2192
BseYI CCCAGC 1 cut(s) 147
BsgI GTGCAG 4 cut(s) 42, 631, 1993, 2191
Bsh1236I CGCG 2 cut(s) 177, 351
Bsh1285I CGRYCG 2 cut(s) 331, 2151
BshFI GGCC 9 cut(s) 5, 87, 145, 172, 287, 305, 330, 1401, 1769
BshNI GGYRCC 1 cut(s) 1832
BsiEI CGRYCG 2 cut(s) 331, 2151
BsiHKAI GWGCWC 3 cut(s) 276, 372, 1164
BsiSI CCGG 3 cut(s) 15, 341, 2151
BslFI GGGAC 3 cut(s) 397, 1019, 2159
BslI CCNNNNNNNGG 3 cut(s) 241, 283, 899
BsmAI GTCTC 4 cut(s) 23, 362, 474, 1327
BsmBI CGTCTC 1 cut(s) 1327
BsmFI GGGAC 3 cut(s) 397, 1019, 2159
BsmI GAATGC 3 cut(s) 378, 1149, 1301
BsnI GGCC 9 cut(s) 5, 87, 145, 172, 287, 305, 330, 1401, 1769
Bso31I GGTCTC 2 cut(s) 23, 362
Bsp1286I GDGCHC 4 cut(s) 276, 337, 372, 1164
Bsp143I GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
Bsp68I TCGCGA 1 cut(s) 351
BspANI GGCC 9 cut(s) 5, 87, 145, 172, 287, 305, 330, 1401, 1769
BspCNI CTCAG 8 cut(s) 134, 260, 529, 834, 1486, 1498, 1958, 1960
BspFNI CGCG 2 cut(s) 177, 351
BspLI GGNNCC 7 cut(s) 146, 173, 1035, 1174, 1834, 2175, 2198
BspMAI CTGCAG 2 cut(s) 589, 1299
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 4 cut(s) 528, 575, 1167, 1180
BspT107I GGYRCC 1 cut(s) 1832
BspTNI GGTCTC 2 cut(s) 23, 362
BsrBI CCGCTC 2 cut(s) 64, 156
BsrDI GCAATG 3 cut(s) 396, 642, 1881
BsrI ACTGG 7 cut(s) 365, 901, 949, 1144, 1222, 2004, 2175
BssECI CCNNGG 3 cut(s) 501, 919, 2176
BssMI GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
BssSI CACGAG 1 cut(s) 1950
BssT1I CCWWGG 2 cut(s) 501, 919
Bst2BI CACGAG 1 cut(s) 1950
Bst2UI CCWGG 2 cut(s) 879, 2178
Bst4CI ACNGT 5 cut(s) 356, 667, 1262, 1939, 2095
Bst6I CTCTTC 2 cut(s) 34, 1473
BstAPI GCANNNNNTGC 1 cut(s) 862
BstC8I GCNNGC 4 cut(s) 202, 724, 1007, 1299
BstENI CCTNNNNNAGG 1 cut(s) 239
BstF5I GGATG 5 cut(s) 469, 820, 1129, 1803, 2234
BstFNI CGCG 2 cut(s) 177, 351
BstH2I RGCGCY 1 cut(s) 626
BstHHI GCGC 1 cut(s) 625
BstKTI GATC 6 cut(s) 536, 583, 1175, 1909, 2010, 2074
BstMAI GTCTC 4 cut(s) 23, 362, 474, 1327
BstMBI GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
BstMCI CGRYCG 2 cut(s) 331, 2151
BstMWI GCNNNNNNNGC 8 cut(s) 84, 90, 293, 302, 584, 862, 1699, 1801
BstNI CCWGG 2 cut(s) 879, 2178
BstNSI RCATGY 1 cut(s) 877
BstSCI CCNGG 2 cut(s) 877, 2176
BstSFI CTRYAG 3 cut(s) 585, 1295, 1395
BstSLI GKGCMC 2 cut(s) 337, 372
BstUI CGCG 2 cut(s) 177, 351
BstV1I GCAGC 7 cut(s) 577, 599, 1067, 1281, 1986, 1997, 2192
BstV2I GAAGAC 1 cut(s) 1378
BstX2I RGATCY 2 cut(s) 1172, 2007
BstYI RGATCY 2 cut(s) 1172, 2007
BstZI CGGCCG 1 cut(s) 328
BsuI GTATCC 1 cut(s) 655
BsuRI GGCC 9 cut(s) 5, 87, 145, 172, 287, 305, 330, 1401, 1769
BtgZI GCGATG 1 cut(s) 2243
BtrI CACGTC 1 cut(s) 1337
BtsCI GGATG 5 cut(s) 469, 820, 1129, 1803, 2234
BtsI GCAGTG 2 cut(s) 483, 851
BtuMI TCGCGA 1 cut(s) 351
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 4 cut(s) 202, 724, 1007, 1299
CaiI CAGNNNCTG 2 cut(s) 884, 1988
CfoI GCGC 1 cut(s) 625
Cfr13I GGNCC 6 cut(s) 144, 171, 881, 1033, 2173, 2197
CseI GACGC 1 cut(s) 220
Csp6I GTAC 5 cut(s) 138, 320, 1833, 1918, 1992
CviQI GTAC 5 cut(s) 138, 320, 1833, 1918, 1992
DpnI GATC 6 cut(s) 535, 582, 1174, 1908, 2009, 2073
DpnII GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
DraIII CACNNNGTG 1 cut(s) 609
EaeI YGGCCR 1 cut(s) 328
EagI CGGCCG 1 cut(s) 328
Eam1104I CTCTTC 2 cut(s) 34, 1473
EarI CTCTTC 2 cut(s) 34, 1473
EciI GGCGGA 2 cut(s) 11, 80
Ecl136II GAGCTC 2 cut(s) 274, 1162
EclXI CGGCCG 1 cut(s) 328
Eco130I CCWWGG 2 cut(s) 501, 919
Eco147I AGGCCT 1 cut(s) 1401
Eco24I GRGCYC 2 cut(s) 276, 1164
Eco31I GGTCTC 2 cut(s) 23, 362
Eco47I GGWCC 4 cut(s) 881, 1033, 2173, 2197
Eco52I CGGCCG 1 cut(s) 328
Eco53kI GAGCTC 2 cut(s) 274, 1162
Eco57I CTGAAG 6 cut(s) 738, 1216, 1297, 1513, 1756, 1906
EcoICRI GAGCTC 2 cut(s) 274, 1162
EcoNI CCTNNNNNAGG 1 cut(s) 239
EcoO109I RGGNCCY 4 cut(s) 144, 171, 881, 1033
EcoRII CCWGG 2 cut(s) 877, 2176
EcoT14I CCWWGG 2 cut(s) 501, 919
EcoT22I ATGCAT 1 cut(s) 396
EcoT38I GRGCYC 2 cut(s) 276, 1164
ErhI CCWWGG 2 cut(s) 501, 919
Esp3I CGTCTC 1 cut(s) 1327
FaqI GGGAC 3 cut(s) 397, 1019, 2159
FauI CCCGC 2 cut(s) 83, 182
FbaI TGATCA 1 cut(s) 1906
FblI GTMKAC 2 cut(s) 1941, 2147
FokI GGATG 5 cut(s) 456, 827, 1136, 1810, 2221
FriOI GRGCYC 2 cut(s) 276, 1164
FspBI CTAG 5 cut(s) 141, 438, 458, 1307, 1683
GlaI GCGC 1 cut(s) 624
GsaI CCCAGC 1 cut(s) 151
GsuI CTGGAG 4 cut(s) 918, 1205, 1724, 2088
HaeII RGCGCY 1 cut(s) 626
HaeIII GGCC 9 cut(s) 5, 87, 145, 172, 287, 305, 330, 1401, 1769
HapII CCGG 3 cut(s) 15, 341, 2151
HgaI GACGC 1 cut(s) 220
HhaI GCGC 1 cut(s) 625
Hin6I GCGC 1 cut(s) 623
HinP1I GCGC 1 cut(s) 623
HincII GTYRAC 3 cut(s) 1265, 1724, 2148
HindII GTYRAC 3 cut(s) 1265, 1724, 2148
HindIII AAGCTT 1 cut(s) 1440
HinfI GANTC 9 cut(s) 245, 258, 497, 544, 832, 986, 995, 1577, 2154
HpaII CCGG 3 cut(s) 15, 341, 2151
HphI GGTGA 1 cut(s) 2192
Hpy166II GTNNAC 6 cut(s) 370, 1265, 1724, 1867, 1942, 2148
Hpy188III TCNNGA 7 cut(s) 350, 414, 427, 518, 842, 992, 1967
Hpy8I GTNNAC 6 cut(s) 370, 1265, 1724, 1867, 1942, 2148
Hpy99I CGWCG 5 cut(s) 182, 185, 188, 191, 356
HpyAV CCTTC 4 cut(s) 737, 1527, 1780, 2107
HpyCH4III ACNGT 5 cut(s) 356, 667, 1262, 1939, 2095
HpyCH4IV ACGT 4 cut(s) 345, 955, 1336, 1811
HpyF10VI GCNNNNNNNGC 8 cut(s) 84, 90, 293, 302, 584, 862, 1699, 1801
HpySE526I ACGT 4 cut(s) 345, 955, 1336, 1811
HspAI GCGC 1 cut(s) 623
KpnI GGTACC 1 cut(s) 1836
Ksp22I TGATCA 1 cut(s) 1906
Kzo9I GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
LmnI GCTCC 4 cut(s) 156, 161, 228, 279
Lsp1109I GCAGC 7 cut(s) 577, 599, 1067, 1281, 1986, 1997, 2192
LweI GCATC 7 cut(s) 283, 565, 1307, 1469, 1689, 1861, 2243
MaeI CTAG 5 cut(s) 141, 438, 458, 1307, 1683
MaeII ACGT 4 cut(s) 345, 955, 1336, 1811
MaeIII GTNAC 6 cut(s) 44, 599, 1130, 1238, 1685, 1895
MalI GATC 6 cut(s) 535, 582, 1174, 1908, 2009, 2073
MbiI CCGCTC 2 cut(s) 64, 156
MboI GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
MboII GAAGA 6 cut(s) 21, 744, 1081, 1383, 1460, 1619
MfeI CAATTG 3 cut(s) 570, 1455, 1659
MflI RGATCY 2 cut(s) 1172, 2007
MhlI GDGCHC 4 cut(s) 276, 337, 372, 1164
MlyI GAGTC 1 cut(s) 239
MmeI TCCRAC 4 cut(s) 129, 427, 917, 1200
Mph1103I ATGCAT 1 cut(s) 396
MseI TTAA 3 cut(s) 1539, 1791, 1815
MslI CAYNNNNRTG 5 cut(s) 474, 488, 1142, 1902, 1908
MspA1I CMGCKG 3 cut(s) 590, 1236, 1988
MspI CCGG 3 cut(s) 15, 341, 2151
MspR9I CCNGG 2 cut(s) 879, 2178
MunI CAATTG 3 cut(s) 570, 1455, 1659
Mva1269I GAATGC 3 cut(s) 378, 1149, 1301
MvaI CCWGG 2 cut(s) 879, 2178
MvnI CGCG 2 cut(s) 177, 351
MwoI GCNNNNNNNGC 8 cut(s) 84, 90, 293, 302, 584, 862, 1699, 1801
NdeII GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
NlaIV GGNNCC 7 cut(s) 146, 173, 1035, 1174, 1834, 2175, 2198
NmeAIII GCCGAG 1 cut(s) 306
NmuCI GTSAC 3 cut(s) 1130, 1685, 1895
NruI TCGCGA 1 cut(s) 351
NsiI ATGCAT 1 cut(s) 396
NspI RCATGY 1 cut(s) 877
OliI CACNNNNGTG 1 cut(s) 488
PceI AGGCCT 1 cut(s) 1401
PcsI WCGNNNNNNNCGW 3 cut(s) 186, 204, 258
PctI GAATGC 3 cut(s) 378, 1149, 1301
PfeI GAWTC 8 cut(s) 258, 497, 544, 832, 986, 995, 1577, 2154
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
PpuMI RGGWCCY 2 cut(s) 881, 1033
Psp124BI GAGCTC 2 cut(s) 276, 1164
Psp5II RGGWCCY 2 cut(s) 881, 1033
Psp6I CCWGG 2 cut(s) 877, 2176
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 2 cut(s) 877, 2176
PspN4I GGNNCC 7 cut(s) 146, 173, 1035, 1174, 1834, 2175, 2198
PspPI GGNCC 6 cut(s) 144, 171, 881, 1033, 2173, 2197
PspPPI RGGWCCY 2 cut(s) 881, 1033
PstI CTGCAG 2 cut(s) 589, 1299
PstNI CAGNNNCTG 2 cut(s) 884, 1988
PsuI RGATCY 2 cut(s) 1172, 2007
PvuII CAGCTG 3 cut(s) 590, 1236, 1988
RruI TCGCGA 1 cut(s) 351
RsaI GTAC 5 cut(s) 139, 321, 1834, 1919, 1993
RsaNI GTAC 5 cut(s) 138, 320, 1833, 1918, 1992
RseI CAYNNNNRTG 5 cut(s) 474, 488, 1142, 1902, 1908
SacI GAGCTC 2 cut(s) 276, 1164
SalI GTCGAC 1 cut(s) 2146
SaqAI TTAA 3 cut(s) 1539, 1791, 1815
Sau3AI GATC 6 cut(s) 533, 580, 1172, 1906, 2007, 2071
Sau96I GGNCC 6 cut(s) 144, 171, 881, 1033, 2173, 2197
SchI GAGTC 1 cut(s) 239
ScrFI CCNGG 2 cut(s) 879, 2178
SduI GDGCHC 4 cut(s) 276, 337, 372, 1164
SfaNI GCATC 7 cut(s) 283, 565, 1307, 1469, 1689, 1861, 2243
SfcI CTRYAG 3 cut(s) 585, 1295, 1395
SinI GGWCC 4 cut(s) 881, 1033, 2173, 2197
SmiMI CAYNNNNRTG 5 cut(s) 474, 488, 1142, 1902, 1908
SmlI CTYRAG 2 cut(s) 359, 1163
SmoI CTYRAG 2 cut(s) 359, 1163
SseBI AGGCCT 1 cut(s) 1401
SspI AATATT 1 cut(s) 1515
SspMI CTAG 5 cut(s) 141, 438, 458, 1307, 1683
SstI GAGCTC 2 cut(s) 276, 1164
StuI AGGCCT 1 cut(s) 1401
StyD4I CCNGG 2 cut(s) 877, 2176
StyI CCWWGG 2 cut(s) 501, 919
TaaI ACNGT 5 cut(s) 356, 667, 1262, 1939, 2095
TaiI ACGT 4 cut(s) 348, 958, 1339, 1814
TaqI TCGA 4 cut(s) 940, 1697, 1828, 2147
TaqII GACCGA 1 cut(s) 644
TatI WGTACW 2 cut(s) 319, 1917
TauI GCSGC 4 cut(s) 87, 207, 378, 1980
TfiI GAWTC 8 cut(s) 258, 497, 544, 832, 986, 995, 1577, 2154
Tru1I TTAA 3 cut(s) 1539, 1791, 1815
Tru9I TTAA 3 cut(s) 1539, 1791, 1815
TseFI GTSAC 3 cut(s) 1130, 1685, 1895
TseI GCWGC 7 cut(s) 587, 590, 1055, 1294, 1974, 1985, 2205
Tsp45I GTSAC 3 cut(s) 1130, 1685, 1895
TspDTI ATGAA 7 cut(s) 411, 458, 824, 1584, 1770, 1814, 2124
TspGWI ACGGA 4 cut(s) 32, 101, 2189, 2259
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 4 cut(s) 881, 1033, 2173, 2197
XagI CCTNNNNNAGG 1 cut(s) 239
XapI RAATTY 5 cut(s) 559, 733, 1343, 1593, 1962
XceI RCATGY 1 cut(s) 877
XmiI GTMKAC 2 cut(s) 1941, 2147
XspI CTAG 5 cut(s) 141, 438, 458, 1307, 1683
Zsp2I ATGCAT 1 cut(s) 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.