Rmu_sc0001035.1_g000030

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001035.1
OG0006395
Physical Location & Seq
Forward (+)
148033 .. 150989
2957 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1542 bp
atggcggaaatgaaacaaagcatagtgctatatccagcatcacctggatcgcactacttgggttccacagtcgaactaggaaagctcatctcccaacgccaccccaacttctccatcatagtcttggtcgacacatcttcccctaaagctctagccaattcctcatacatcaaccatcttctctcttctgatcaaacctccatctccttcttcactctcccctccctcaatctcccccaccccgacgcccaacccaaactcgaatacttcttaactgtccccaatgtcgtccaagccctcaagacaatctctctcacttccaaagtcctcgccttcatcacgtcagcagtgcaacagtaccctaacgacccggaaatcccaacttactattacttcccctcttgcgcctctgttcttgctctgcttctgtacctccccactttccatgatcaaacgccggagagcttcaaggacctaaacgacgacgttgtggagtttccgggattgccagcgctccgaggctcgcaaatgccggatcctattctcgaccgcaacgaggctggatatgatcactatctccatatggtttcctgtcttccaaaagcgaagggaattataataaacaccatccaagaacttgagcctcgagcaatcaaggccataaaggaaggtctttgtgttcctaatcatcgaactccgccgttatatcacatcggaccgttcatttccgatcgcgactctgaaaataggtcgatccaaggcggttcgcctatgccaactaactgttccacgttgttatggctggatgagcagccgagccggagtgtggtgtacctgtgctttggaagcagaggtacgttttctgaagagcagtttaaggaattggctttaggcttggagagaagcaagttgagatttttgtgggttgtgaggagtcagctggatttggaggtactgctaccccaagggttcttggagaggaccaaagatagaggtcttgtagtcacgtcttgggcgccacaggttgctattctaagtcatgaatctgtgggtgggtttgtgactcactgtgggtggaactcaatcactgaagcagtgacttatggagtgcctatggtggcttggcctttgtatgctgagcaggaagtgaacagtgtgtggatcgaagctagacaagttctgttacaaggactccgatggcaagtgcgtaatgggtctcagattgaaatttggaaccatagttggattcctgatgtgtatcctaggtgcccttctttaactcctccccgggatgctcctgtgtatgtgtccaagcttattgatccaattacacggagttgggatttaaatcttattaccagtgcgtactatgtggcgaaggatcttgtacttggggtagttttagcacctccattaccgattgatcctatgaaggcagtttggaaggctatatggaacgccaagatacccggaaaagtcgcactcaatgcttggagggcggcagcaaatatattgcctactagaattgagtcttggttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

513

Amino Acids

57.42

Weight (kDa)

6.19

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 270 - 391 1.7e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AccB1I GGYRCC 2 cut(s) 1015, 1266
AccI GTMKAC 1 cut(s) 129
AccII CGCG 1 cut(s) 735
AciI CCGC 5 cut(s) 5, 550, 698, 762, 1499
AclWI GGATC 8 cut(s) 55, 530, 543, 748, 1169, 1316, 1389, 1418
AcsI RAATTY 1 cut(s) 1227
AcuI CTGAAG 2 cut(s) 885, 1110
AcyI GRCGYC 2 cut(s) 246, 1016
AfaI GTAC 7 cut(s) 359, 431, 833, 856, 954, 1367, 1389
AfeI AGCGCT 1 cut(s) 513
AfiI CCNNNNNNNGG 2 cut(s) 556, 826
AgsI TTSAA 2 cut(s) 469, 1226
AjiI CACGTC 2 cut(s) 342, 1008
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 3 cut(s) 769, 801, 1516
AluBI AGCT 6 cut(s) 85, 149, 465, 940, 1169, 1315
AluI AGCT 6 cut(s) 85, 149, 465, 940, 1169, 1315
Alw26I GTCTC 1 cut(s) 1221
AlwI GGATC 8 cut(s) 55, 530, 543, 748, 1169, 1316, 1389, 1418
Ama87I CYCGRG 2 cut(s) 645, 1287
Aor51HI AGCGCT 1 cut(s) 513
AoxI GGCC 2 cut(s) 657, 1124
ApeKI GCWGC 2 cut(s) 811, 1502
ApoI RAATTY 1 cut(s) 1227
AspA2I CCTAGG 1 cut(s) 1262
AspLEI GCGC 3 cut(s) 407, 514, 1018
AspS9I GGNCC 3 cut(s) 472, 716, 981
AsuC2I CCSGG 5 cut(s) 371, 501, 1288, 1289, 1470
AsuHPI GGTGA 1 cut(s) 33
AvaI CYCGRG 2 cut(s) 645, 1287
AvaII GGWCC 3 cut(s) 472, 716, 981
AvrII CCTAGG 1 cut(s) 1262
BaeGI GKGCMC 1 cut(s) 1271
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 2 cut(s) 1015, 1266
BarI GAAGNNNNNNTAC 2 cut(s) 838, 870
BbsI GAAGAC 1 cut(s) 587
BbvI GCAGC 2 cut(s) 823, 1514
BccI CCATC 5 cut(s) 122, 183, 209, 635, 1191
BceAI ACGGC 1 cut(s) 685
BciT130I CCWGG 1 cut(s) 45
BciVI GTATCC 1 cut(s) 1269
BclI TGATCA 3 cut(s) 190, 448, 568
BcnI CCSGG 5 cut(s) 371, 501, 1288, 1289, 1470
BcoDI GTCTC 1 cut(s) 1221
BfaI CTAG 5 cut(s) 77, 152, 1170, 1263, 1521
BfoI RGCGCY 2 cut(s) 515, 1019
BfuI GTATCC 1 cut(s) 1269
BisI GCNGC 3 cut(s) 812, 1500, 1503
BlnI CCTAGG 1 cut(s) 1262
BlpI GCTNAGC 1 cut(s) 1137
BlsI GCNGC 3 cut(s) 813, 1501, 1504
Bme1390I CCNGG 6 cut(s) 45, 371, 501, 1288, 1289, 1470
Bme18I GGWCC 3 cut(s) 472, 716, 981
BmeT110I CYCGRG 2 cut(s) 645, 1287
BmgBI CACGTC 2 cut(s) 342, 1008
BmgT120I GGNCC 3 cut(s) 472, 716, 981
BmiI GGNNCC 5 cut(s) 64, 537, 1017, 1235, 1268
BmrFI CCNGG 6 cut(s) 45, 371, 501, 1288, 1289, 1470
BmsI GCATC 2 cut(s) 47, 1282
BpiI GAAGAC 1 cut(s) 587
Bpu1102I GCTNAGC 1 cut(s) 1137
BpuEI CTTGAG 2 cut(s) 284, 659
BpuMI CCSGG 5 cut(s) 371, 501, 1288, 1289, 1470
BsaBI GATNNNNATC 3 cut(s) 573, 1257, 1347
BsaHI GRCGYC 2 cut(s) 246, 1016
BsaI GGTCTC 1 cut(s) 1221
BsaJI CCNNGG 6 cut(s) 517, 757, 964, 1262, 1286, 1287
BsaXI ACNNNNNCTCC 2 cut(s) 1176, 1206
Bsc4I CCNNNNNNNGG 2 cut(s) 556, 826
Bse1I ACTGG 1 cut(s) 1359
Bse8I GATNNNNATC 3 cut(s) 573, 1257, 1347
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 6 cut(s) 517, 757, 964, 1262, 1286, 1287
BseGI GGATG 3 cut(s) 627, 811, 1297
BseJI GATNNNNATC 3 cut(s) 573, 1257, 1347
BseLI CCNNNNNNNGG 2 cut(s) 556, 826
BseMII CTCAG 2 cut(s) 1128, 1232
BseNI ACTGG 1 cut(s) 1359
BseRI GAGGAG 2 cut(s) 946, 1272
BseSI GKGCMC 1 cut(s) 1271
BseXI GCAGC 2 cut(s) 823, 1514
Bsh1236I CGCG 1 cut(s) 735
Bsh1285I CGRYCG 2 cut(s) 550, 733
BshFI GGCC 2 cut(s) 659, 1126
BshNI GGYRCC 2 cut(s) 1015, 1266
BsiEI CGRYCG 2 cut(s) 550, 733
BsiHKCI CYCGRG 2 cut(s) 645, 1287
BsiSI CCGG 7 cut(s) 371, 458, 500, 533, 820, 1288, 1470
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 2 cut(s) 556, 826
BsmAI GTCTC 1 cut(s) 1221
BsmFI GGGAC 1 cut(s) 263
BsnI GGCC 2 cut(s) 659, 1126
Bso31I GGTCTC 1 cut(s) 1221
BsoBI CYCGRG 2 cut(s) 645, 1287
Bsp1286I GDGCHC 1 cut(s) 1271
Bsp1720I GCTNAGC 1 cut(s) 1137
Bsp68I TCGCGA 1 cut(s) 735
BspACI CCGC 5 cut(s) 5, 550, 698, 762, 1499
BspANI GGCC 2 cut(s) 659, 1126
BspCNI CTCAG 2 cut(s) 1129, 1231
BspFNI CGCG 1 cut(s) 735
BspHI TCATGA 1 cut(s) 1039
BspLI GGNNCC 5 cut(s) 64, 537, 1017, 1235, 1268
BspPI GGATC 8 cut(s) 55, 530, 543, 748, 1169, 1316, 1389, 1418
BspQI GCTCTTC 1 cut(s) 861
BspT107I GGYRCC 2 cut(s) 1015, 1266
BspTNI GGTCTC 1 cut(s) 1221
BsrI ACTGG 1 cut(s) 1359
BssECI CCNNGG 6 cut(s) 517, 757, 964, 1262, 1286, 1287
BssNI GRCGYC 2 cut(s) 246, 1016
BssT1I CCWWGG 3 cut(s) 757, 964, 1262
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 7 cut(s) 70, 277, 357, 720, 785, 1070, 1154
Bst6I CTCTTC 2 cut(s) 190, 861
BstACI GRCGYC 2 cut(s) 246, 1016
BstAPI GCANNNNNTGC 1 cut(s) 1487
BstC8I GCNNGC 2 cut(s) 510, 524
BstDEI CTNAG 3 cut(s) 1034, 1137, 1218
BstF5I GGATG 3 cut(s) 627, 811, 1297
BstFNI CGCG 1 cut(s) 735
BstH2I RGCGCY 2 cut(s) 515, 1019
BstHHI GCGC 3 cut(s) 407, 514, 1018
BstMAI GTCTC 1 cut(s) 1221
BstMCI CGRYCG 2 cut(s) 550, 733
BstMWI GCNNNNNNNGC 5 cut(s) 656, 808, 846, 1487, 1496
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 6 cut(s) 43, 369, 499, 1286, 1287, 1468
BstSLI GKGCMC 1 cut(s) 1271
BstUI CGCG 1 cut(s) 735
BstV1I GCAGC 2 cut(s) 823, 1514
BstV2I GAAGAC 1 cut(s) 587
BstX2I RGATCY 2 cut(s) 535, 1381
BstYI RGATCY 2 cut(s) 535, 1381
BsuI GTATCC 1 cut(s) 1269
BsuRI GGCC 2 cut(s) 659, 1126
BtrI CACGTC 2 cut(s) 342, 1008
BtsCI GGATG 3 cut(s) 627, 811, 1297
BtsI GCAGTG 2 cut(s) 354, 1101
BtsIMutI CAGTG 6 cut(s) 354, 1066, 1086, 1101, 1159, 1366
BtuMI TCGCGA 1 cut(s) 735
Cac8I GCNNGC 2 cut(s) 510, 524
CciI TCATGA 1 cut(s) 1039
CfoI GCGC 3 cut(s) 407, 514, 1018
Cfr13I GGNCC 3 cut(s) 472, 716, 981
Cfr9I CCCGGG 1 cut(s) 1287
CpoI CGGWCCG 1 cut(s) 716
CseI GACGC 1 cut(s) 254
Csp6I GTAC 7 cut(s) 358, 430, 832, 855, 953, 1366, 1388
CspI CGGWCCG 1 cut(s) 716
CviAII CATG 2 cut(s) 446, 1040
CviQI GTAC 7 cut(s) 358, 430, 832, 855, 953, 1366, 1388
DdeI CTNAG 3 cut(s) 1034, 1137, 1218
DinI GGCGCC 1 cut(s) 1017
DraI TTTAAA 1 cut(s) 1347
Eam1104I CTCTTC 2 cut(s) 190, 861
EarI CTCTTC 2 cut(s) 190, 861
EciI GGCGGA 2 cut(s) 20, 687
Eco130I CCWWGG 3 cut(s) 757, 964, 1262
Eco31I GGTCTC 1 cut(s) 1221
Eco47I GGWCC 3 cut(s) 472, 716, 981
Eco47III AGCGCT 1 cut(s) 513
Eco57I CTGAAG 2 cut(s) 885, 1110
Eco88I CYCGRG 2 cut(s) 645, 1287
EcoO109I RGGNCCY 1 cut(s) 472
EcoRII CCWGG 1 cut(s) 43
EcoT14I CCWWGG 3 cut(s) 757, 964, 1262
EgeI GGCGCC 1 cut(s) 1017
EheI GGCGCC 1 cut(s) 1017
ErhI CCWWGG 3 cut(s) 757, 964, 1262
FaeI CATG 2 cut(s) 449, 1043
FaqI GGGAC 1 cut(s) 263
FatI CATG 2 cut(s) 445, 1039
FauNDI CATATG 1 cut(s) 582
FbaI TGATCA 3 cut(s) 190, 448, 568
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 3 cut(s) 812, 1500, 1503
FokI GGATG 3 cut(s) 614, 818, 1304
Fsp4HI GCNGC 3 cut(s) 812, 1500, 1503
FspBI CTAG 5 cut(s) 77, 152, 1170, 1263, 1521
GlaI GCGC 3 cut(s) 406, 513, 1017
GluI GCNGC 3 cut(s) 812, 1500, 1503
HaeII RGCGCY 2 cut(s) 515, 1019
HaeIII GGCC 2 cut(s) 659, 1126
HapII CCGG 7 cut(s) 371, 458, 500, 533, 820, 1288, 1470
HgaI GACGC 1 cut(s) 254
HhaI GCGC 3 cut(s) 407, 514, 1018
Hin1I GRCGYC 2 cut(s) 246, 1016
Hin1II CATG 2 cut(s) 449, 1043
Hin6I GCGC 3 cut(s) 405, 512, 1016
HinP1I GCGC 3 cut(s) 405, 512, 1016
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 1313
HinfI GANTC 7 cut(s) 737, 934, 1043, 1063, 1191, 1246, 1529
HpaII CCGG 7 cut(s) 371, 458, 500, 533, 820, 1288, 1470
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 3 cut(s) 130, 832, 1150
Hpy188I TCNGA 8 cut(s) 190, 518, 716, 730, 742, 865, 1196, 1221
Hpy188III TCNNGA 5 cut(s) 301, 545, 734, 1040, 1250
Hpy8I GTNNAC 3 cut(s) 130, 832, 1150
Hpy99I CGWCG 3 cut(s) 248, 485, 488
HpyAV CCTTC 8 cut(s) 217, 343, 601, 662, 1281, 1372, 1426, 1438
HpyCH4III ACNGT 7 cut(s) 70, 277, 357, 720, 785, 1070, 1154
HpyCH4IV ACGT 5 cut(s) 341, 486, 791, 857, 1007
HpyCH4V TGCA 1 cut(s) 352
HpyF10VI GCNNNNNNNGC 5 cut(s) 656, 808, 846, 1487, 1496
HpyF3I CTNAG 3 cut(s) 1034, 1137, 1218
HpySE526I ACGT 5 cut(s) 341, 486, 791, 857, 1007
Hsp92I GRCGYC 2 cut(s) 246, 1016
Hsp92II CATG 2 cut(s) 449, 1043
HspAI GCGC 3 cut(s) 405, 512, 1016
KasI GGCGCC 1 cut(s) 1015
Ksp22I TGATCA 3 cut(s) 190, 448, 568
LguI GCTCTTC 1 cut(s) 861
LmnI GCTCC 2 cut(s) 519, 1300
Lsp1109I GCAGC 2 cut(s) 823, 1514
LweI GCATC 2 cut(s) 47, 1282
MaeI CTAG 5 cut(s) 77, 152, 1170, 1263, 1521
MaeII ACGT 5 cut(s) 341, 486, 791, 857, 1007
MaeIII GTNAC 4 cut(s) 1003, 1060, 1096, 1182
MboII GAAGA 6 cut(s) 129, 170, 177, 202, 587, 878
MflI RGATCY 2 cut(s) 535, 1381
MhlI GDGCHC 1 cut(s) 1271
MluCI AATT 6 cut(s) 157, 612, 881, 1227, 1326, 1524
Mly113I GGCGCC 1 cut(s) 1016
MlyI GAGTC 5 cut(s) 731, 943, 1057, 1185, 1538
MmeI TCCRAC 1 cut(s) 1223
MseI TTAA 4 cut(s) 272, 876, 1277, 1346
MspA1I CMGCKG 1 cut(s) 940
MspI CCGG 7 cut(s) 371, 458, 500, 533, 820, 1288, 1470
MspR9I CCNGG 6 cut(s) 45, 371, 501, 1288, 1289, 1470
MvaI CCWGG 1 cut(s) 45
MvnI CGCG 1 cut(s) 735
MwoI GCNNNNNNNGC 5 cut(s) 656, 808, 846, 1487, 1496
NarI GGCGCC 1 cut(s) 1016
NciI CCSGG 5 cut(s) 371, 501, 1288, 1289, 1470
NdeI CATATG 1 cut(s) 582
NlaIII CATG 2 cut(s) 449, 1043
NlaIV GGNNCC 5 cut(s) 64, 537, 1017, 1235, 1268
NmeAIII GCCGAG 1 cut(s) 840
NmuCI GTSAC 3 cut(s) 1003, 1060, 1096
NruI TCGCGA 1 cut(s) 735
PaeR7I CTCGAG 1 cut(s) 645
PagI TCATGA 1 cut(s) 1039
PciSI GCTCTTC 1 cut(s) 861
PcsI WCGNNNNNNNCGW 1 cut(s) 552
PfeI GAWTC 2 cut(s) 1043, 1246
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 3 cut(s) 813, 1501, 1504
Ple19I CGATCG 1 cut(s) 733
PleI GAGTC 5 cut(s) 731, 942, 1057, 1185, 1537
PluTI GGCGCC 1 cut(s) 1019
PpsI GAGTC 5 cut(s) 731, 942, 1057, 1185, 1537
PpuMI RGGWCCY 1 cut(s) 472
PsiI TTATAA 1 cut(s) 617
Psp5II RGGWCCY 1 cut(s) 472
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 5 cut(s) 64, 537, 1017, 1235, 1268
PspPI GGNCC 3 cut(s) 472, 716, 981
PspPPI RGGWCCY 1 cut(s) 472
PspXI VCTCGAGB 1 cut(s) 645
PsuI RGATCY 2 cut(s) 535, 1381
PvuI CGATCG 1 cut(s) 733
PvuII CAGCTG 1 cut(s) 940
RruI TCGCGA 1 cut(s) 735
RsaI GTAC 7 cut(s) 359, 431, 833, 856, 954, 1367, 1389
RsaNI GTAC 7 cut(s) 358, 430, 832, 855, 953, 1366, 1388
Rsr2I CGGWCCG 1 cut(s) 716
RsrII CGGWCCG 1 cut(s) 716
SalI GTCGAC 1 cut(s) 128
SapI GCTCTTC 1 cut(s) 861
SaqAI TTAA 4 cut(s) 272, 876, 1277, 1346
SatI GCNGC 3 cut(s) 812, 1500, 1503
Sau96I GGNCC 3 cut(s) 472, 716, 981
SchI GAGTC 5 cut(s) 731, 943, 1057, 1185, 1538
ScrFI CCNGG 6 cut(s) 45, 371, 501, 1288, 1289, 1470
SduI GDGCHC 1 cut(s) 1271
SfaNI GCATC 2 cut(s) 47, 1282
SfoI GGCGCC 1 cut(s) 1017
Sfr274I CTCGAG 1 cut(s) 645
SinI GGWCC 3 cut(s) 472, 716, 981
SlaI CTCGAG 1 cut(s) 645
SmaI CCCGGG 1 cut(s) 1289
SmiI ATTTAAAT 1 cut(s) 1347
SmlI CTYRAG 3 cut(s) 299, 638, 645
SmoI CTYRAG 3 cut(s) 299, 638, 645
Sse9I AATT 6 cut(s) 157, 612, 881, 1227, 1326, 1524
SsiI CCGC 5 cut(s) 5, 550, 698, 762, 1499
SspDI GGCGCC 1 cut(s) 1015
SspMI CTAG 5 cut(s) 77, 152, 1170, 1263, 1521
StyD4I CCNGG 6 cut(s) 43, 369, 499, 1286, 1287, 1468
StyI CCWWGG 3 cut(s) 757, 964, 1262
SwaI ATTTAAAT 1 cut(s) 1347
TaaI ACNGT 7 cut(s) 70, 277, 357, 720, 785, 1070, 1154
TaiI ACGT 5 cut(s) 344, 489, 794, 860, 1010
TaqI TCGA 8 cut(s) 72, 129, 261, 546, 646, 691, 752, 1164
TasI AATT 6 cut(s) 157, 612, 881, 1227, 1326, 1524
TatI WGTACW 1 cut(s) 1387
TauI GCSGC 1 cut(s) 1502
TfiI GAWTC 2 cut(s) 1043, 1246
Tru1I TTAA 4 cut(s) 272, 876, 1277, 1346
Tru9I TTAA 4 cut(s) 272, 876, 1277, 1346
TscAI CASTG 6 cut(s) 354, 1073, 1093, 1101, 1159, 1366
TseFI GTSAC 3 cut(s) 1003, 1060, 1096
TseI GCWGC 2 cut(s) 811, 1502
Tsp45I GTSAC 3 cut(s) 1003, 1060, 1096
TspDTI ATGAA 5 cut(s) 26, 325, 712, 1056, 1445
TspGWI ACGGA 1 cut(s) 1348
TspMI CCCGGG 1 cut(s) 1287
TspRI CASTG 6 cut(s) 354, 1073, 1093, 1101, 1159, 1366
VpaK11BI GGWCC 3 cut(s) 472, 716, 981
XapI RAATTY 1 cut(s) 1227
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 645
XmaI CCCGGG 1 cut(s) 1287
XmaJI CCTAGG 1 cut(s) 1262
XmiI GTMKAC 1 cut(s) 129
XspI CTAG 5 cut(s) 77, 152, 1170, 1263, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.