No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1661 |
| Acc36I | ACCTGC | 4 cut(s) | 716, 975, 1661, 1712 |
| Acc65I | GGTACC | 1 cut(s) | 367 |
| AccB1I | GGYRCC | 2 cut(s) | 97, 367 |
| AccBSI | CCGCTC | 2 cut(s) | 159, 320 |
| AccI | GTMKAC | 2 cut(s) | 469, 826 |
| AccII | CGCG | 1 cut(s) | 300 |
| AclWI | GGATC | 1 cut(s) | 63 |
| AcsI | RAATTY | 8 cut(s) | 446, 496, 803, 853, 994, 1183, 1560, 1573 |
| AcyI | GRCGYC | 1 cut(s) | 98 |
| AfaI | GTAC | 5 cut(s) | 369, 730, 978, 1378, 1456 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 377 |
| AflII | CTTAAG | 1 cut(s) | 578 |
| AflIII | ACRYGT | 1 cut(s) | 90 |
| AgsI | TTSAA | 3 cut(s) | 621, 628, 1704 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1528 |
| AhlI | ACTAGT | 1 cut(s) | 343 |
| AluBI | AGCT | 8 cut(s) | 259, 434, 791, 1021, 1114, 1504, 1583, 1728 |
| AluI | AGCT | 8 cut(s) | 259, 434, 791, 1021, 1114, 1504, 1583, 1728 |
| Alw21I | GWGCWC | 2 cut(s) | 240, 261 |
| Alw26I | GTCTC | 3 cut(s) | 172, 395, 1155 |
| AlwI | GGATC | 1 cut(s) | 63 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1208 |
| AoxI | GGCC | 1 cut(s) | 1658 |
| ApeKI | GCWGC | 4 cut(s) | 965, 1279, 1321, 1667 |
| ApoI | RAATTY | 8 cut(s) | 446, 496, 803, 853, 994, 1183, 1560, 1573 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 314, 346 |
| AseI | ATTAAT | 1 cut(s) | 207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1183 |
| Asp718I | GGTACC | 1 cut(s) | 367 |
| AspLEI | GCGC | 1 cut(s) | 100 |
| AsuHPI | GGTGA | 3 cut(s) | 691, 1082, 1631 |
| AsuNHI | GCTAGC | 1 cut(s) | 953 |
| AxyI | CCTNAGG | 1 cut(s) | 1662 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 181, 214 |
| BanI | GGYRCC | 2 cut(s) | 97, 367 |
| BanII | GRGCYC | 1 cut(s) | 261 |
| BbsI | GAAGAC | 1 cut(s) | 606 |
| Bbv12I | GWGCWC | 2 cut(s) | 240, 261 |
| BbvI | GCAGC | 4 cut(s) | 977, 1266, 1333, 1654 |
| BclI | TGATCA | 1 cut(s) | 1555 |
| BcoDI | GTCTC | 3 cut(s) | 172, 395, 1155 |
| BcuI | ACTAGT | 1 cut(s) | 343 |
| BfaI | CTAG | 4 cut(s) | 135, 176, 344, 954 |
| BfmI | CTRYAG | 3 cut(s) | 1131, 1209, 1668 |
| BfoI | RGCGCY | 1 cut(s) | 101 |
| BfrI | CTTAAG | 1 cut(s) | 578 |
| BfuAI | ACCTGC | 4 cut(s) | 716, 975, 1661, 1712 |
| BmcAI | AGTACT | 2 cut(s) | 978, 1378 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1528 |
| BmiI | GGNNCC | 7 cut(s) | 99, 369, 537, 894, 1451, 1606, 1747 |
| BmsI | GCATC | 8 cut(s) | 110, 273, 481, 758, 838, 1214, 1291, 1499 |
| BmtI | GCTAGC | 1 cut(s) | 957 |
| BpiI | GAAGAC | 1 cut(s) | 606 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1729 |
| BsaHI | GRCGYC | 1 cut(s) | 98 |
| BsaJI | CCNNGG | 5 cut(s) | 103, 241, 744, 1052, 1655 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 377 |
| Bse1I | ACTGG | 5 cut(s) | 362, 944, 1093, 1260, 1633 |
| Bse21I | CCTNAGG | 1 cut(s) | 1662 |
| Bse3DI | GCAATG | 2 cut(s) | 247, 934 |
| BseDI | CCNNGG | 5 cut(s) | 103, 241, 744, 1052, 1655 |
| BseGI | GGATG | 6 cut(s) | 288, 427, 678, 1171, 1237, 1282 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 377 |
| BseMI | GCAATG | 2 cut(s) | 247, 934 |
| BseMII | CTCAG | 8 cut(s) | 52, 1166, 1172, 1215, 1394, 1470, 1676, 1743 |
| BseNI | ACTGG | 5 cut(s) | 362, 944, 1093, 1260, 1633 |
| BseXI | GCAGC | 4 cut(s) | 977, 1266, 1333, 1654 |
| BseYI | CCCAGC | 1 cut(s) | 1741 |
| Bsh1236I | CGCG | 1 cut(s) | 300 |
| BshFI | GGCC | 1 cut(s) | 1660 |
| BshNI | GGYRCC | 2 cut(s) | 97, 367 |
| BsiHKAI | GWGCWC | 2 cut(s) | 240, 261 |
| BsiSI | CCGG | 1 cut(s) | 289 |
| BslFI | GGGAC | 1 cut(s) | 1535 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 377 |
| BsmAI | GTCTC | 3 cut(s) | 172, 395, 1155 |
| BsmBI | CGTCTC | 1 cut(s) | 172 |
| BsmFI | GGGAC | 1 cut(s) | 1535 |
| BsnI | GGCC | 1 cut(s) | 1660 |
| Bsp1286I | GDGCHC | 2 cut(s) | 240, 261 |
| Bsp143I | GATC | 3 cut(s) | 68, 1339, 1555 |
| BspANI | GGCC | 1 cut(s) | 1660 |
| BspCNI | CTCAG | 8 cut(s) | 51, 1165, 1171, 1214, 1393, 1471, 1675, 1742 |
| BspFNI | CGCG | 1 cut(s) | 300 |
| BspHI | TCATGA | 1 cut(s) | 1515 |
| BspLI | GGNNCC | 7 cut(s) | 99, 369, 537, 894, 1451, 1606, 1747 |
| BspMAI | CTGCAG | 2 cut(s) | 1135, 1672 |
| BspMI | ACCTGC | 4 cut(s) | 716, 975, 1661, 1712 |
| BspOI | GCTAGC | 1 cut(s) | 957 |
| BspPI | GGATC | 1 cut(s) | 63 |
| BspT107I | GGYRCC | 2 cut(s) | 97, 367 |
| BspTI | CTTAAG | 1 cut(s) | 578 |
| BsrBI | CCGCTC | 2 cut(s) | 159, 320 |
| BsrDI | GCAATG | 2 cut(s) | 247, 934 |
| BsrI | ACTGG | 5 cut(s) | 362, 944, 1093, 1260, 1633 |
| BssECI | CCNNGG | 5 cut(s) | 103, 241, 744, 1052, 1655 |
| BssMI | GATC | 3 cut(s) | 68, 1339, 1555 |
| BssNI | GRCGYC | 1 cut(s) | 98 |
| BssT1I | CCWWGG | 1 cut(s) | 1052 |
| Bst4CI | ACNGT | 7 cut(s) | 372, 474, 733, 831, 1400, 1513, 1530 |
| BstACI | GRCGYC | 1 cut(s) | 98 |
| BstAFI | CTTAAG | 1 cut(s) | 578 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 491, 848 |
| BstC8I | GCNNGC | 3 cut(s) | 186, 955, 1585 |
| BstDSI | CCRYGG | 2 cut(s) | 103, 241 |
| BstEII | GGTNACC | 1 cut(s) | 1619 |
| BstF5I | GGATG | 6 cut(s) | 288, 427, 678, 1171, 1237, 1282 |
| BstFNI | CGCG | 1 cut(s) | 300 |
| BstH2I | RGCGCY | 1 cut(s) | 101 |
| BstHHI | GCGC | 1 cut(s) | 100 |
| BstKTI | GATC | 3 cut(s) | 71, 1342, 1558 |
| BstMAI | GTCTC | 3 cut(s) | 172, 395, 1155 |
| BstMBI | GATC | 3 cut(s) | 68, 1339, 1555 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 10, 270, 491, 683, 848, 1045 |
| BstNSI | RCATGY | 4 cut(s) | 524, 765, 881, 1392 |
| BstPI | GGTNACC | 1 cut(s) | 1619 |
| BstSFI | CTRYAG | 3 cut(s) | 1131, 1209, 1668 |
| BstUI | CGCG | 1 cut(s) | 300 |
| BstV1I | GCAGC | 4 cut(s) | 977, 1266, 1333, 1654 |
| BstV2I | GAAGAC | 1 cut(s) | 606 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1662 |
| BsuRI | GGCC | 1 cut(s) | 1660 |
| BtgI | CCRYGG | 2 cut(s) | 103, 241 |
| BtgZI | GCGATG | 1 cut(s) | 441 |
| BtsCI | GGATG | 6 cut(s) | 288, 427, 678, 1171, 1237, 1282 |
| BtsI | GCAGTG | 2 cut(s) | 126, 1491 |
| BtsIMutI | CAGTG | 6 cut(s) | 126, 355, 738, 951, 1491, 1509 |
| BveI | ACCTGC | 4 cut(s) | 716, 975, 1661, 1712 |
| Cac8I | GCNNGC | 3 cut(s) | 186, 955, 1585 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1208 |
| CciI | TCATGA | 1 cut(s) | 1515 |
| CfoI | GCGC | 1 cut(s) | 100 |
| Csp6I | GTAC | 5 cut(s) | 368, 729, 977, 1377, 1455 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 230, 265 |
| CviAII | CATG | 8 cut(s) | 193, 338, 521, 762, 878, 1389, 1516, 1750 |
| CviQI | GTAC | 5 cut(s) | 368, 729, 977, 1377, 1455 |
| DinI | GGCGCC | 1 cut(s) | 99 |
| DpnI | GATC | 3 cut(s) | 70, 1341, 1557 |
| DpnII | GATC | 3 cut(s) | 68, 1339, 1555 |
| DraI | TTTAAA | 1 cut(s) | 1303 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1528 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1528 |
| Ecl136II | GAGCTC | 1 cut(s) | 259 |
| Eco130I | CCWWGG | 1 cut(s) | 1052 |
| Eco147I | AGGCCT | 1 cut(s) | 1660 |
| Eco24I | GRGCYC | 1 cut(s) | 261 |
| Eco53kI | GAGCTC | 1 cut(s) | 259 |
| Eco81I | CCTNAGG | 1 cut(s) | 1662 |
| Eco91I | GGTNACC | 1 cut(s) | 1619 |
| EcoICRI | GAGCTC | 1 cut(s) | 259 |
| EcoO65I | GGTNACC | 1 cut(s) | 1619 |
| EcoRI | GAATTC | 1 cut(s) | 1183 |
| EcoT14I | CCWWGG | 1 cut(s) | 1052 |
| EcoT22I | ATGCAT | 2 cut(s) | 522, 879 |
| EcoT38I | GRGCYC | 1 cut(s) | 261 |
| EgeI | GGCGCC | 1 cut(s) | 99 |
| EheI | GGCGCC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 1052 |
| Esp3I | CGTCTC | 1 cut(s) | 172 |
| FaeI | CATG | 8 cut(s) | 196, 341, 524, 765, 881, 1392, 1519, 1753 |
| FaqI | GGGAC | 1 cut(s) | 1535 |
| FatI | CATG | 8 cut(s) | 192, 337, 520, 761, 877, 1388, 1515, 1749 |
| FauI | CCCGC | 1 cut(s) | 293 |
| FauNDI | CATATG | 1 cut(s) | 1084 |
| FbaI | TGATCA | 1 cut(s) | 1555 |
| FblI | GTMKAC | 2 cut(s) | 469, 826 |
| FokI | GGATG | 6 cut(s) | 295, 434, 685, 1178, 1244, 1269 |
| FriOI | GRGCYC | 1 cut(s) | 261 |
| FspBI | CTAG | 4 cut(s) | 135, 176, 344, 954 |
| GlaI | GCGC | 1 cut(s) | 99 |
| GsaI | CCCAGC | 1 cut(s) | 1745 |
| HaeII | RGCGCY | 1 cut(s) | 101 |
| HaeIII | GGCC | 1 cut(s) | 1660 |
| HapII | CCGG | 1 cut(s) | 289 |
| HhaI | GCGC | 1 cut(s) | 100 |
| Hin1I | GRCGYC | 1 cut(s) | 98 |
| Hin1II | CATG | 8 cut(s) | 196, 341, 524, 765, 881, 1392, 1519, 1753 |
| Hin6I | GCGC | 1 cut(s) | 98 |
| HinP1I | GCGC | 1 cut(s) | 98 |
| HincII | GTYRAC | 2 cut(s) | 222, 1098 |
| HindII | GTYRAC | 2 cut(s) | 222, 1098 |
| HindIII | AAGCTT | 1 cut(s) | 1581 |
| HinfI | GANTC | 2 cut(s) | 266, 1127 |
| HpaI | GTTAAC | 1 cut(s) | 222 |
| HpaII | CCGG | 1 cut(s) | 289 |
| HphI | GGTGA | 3 cut(s) | 691, 1082, 1631 |
| Hpy166II | GTNNAC | 4 cut(s) | 222, 470, 827, 1098 |
| Hpy188III | TCNNGA | 7 cut(s) | 315, 392, 643, 1239, 1382, 1516, 1731 |
| Hpy8I | GTNNAC | 4 cut(s) | 222, 470, 827, 1098 |
| Hpy99I | CGWCG | 3 cut(s) | 69, 118, 300 |
| HpyAV | CCTTC | 4 cut(s) | 943, 1051, 1548, 1619 |
| HpyCH4III | ACNGT | 7 cut(s) | 372, 474, 733, 831, 1400, 1513, 1530 |
| HpyCH4IV | ACGT | 3 cut(s) | 64, 90, 1100 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 10, 270, 491, 683, 848, 1045 |
| HpySE526I | ACGT | 3 cut(s) | 64, 90, 1100 |
| Hsp92I | GRCGYC | 1 cut(s) | 98 |
| Hsp92II | CATG | 8 cut(s) | 196, 341, 524, 765, 881, 1392, 1519, 1753 |
| HspAI | GCGC | 1 cut(s) | 98 |
| KasI | GGCGCC | 1 cut(s) | 97 |
| KpnI | GGTACC | 1 cut(s) | 371 |
| Ksp22I | TGATCA | 1 cut(s) | 1555 |
| KspAI | GTTAAC | 1 cut(s) | 222 |
| Kzo9I | GATC | 3 cut(s) | 68, 1339, 1555 |
| Lsp1109I | GCAGC | 4 cut(s) | 977, 1266, 1333, 1654 |
| LweI | GCATC | 8 cut(s) | 110, 273, 481, 758, 838, 1214, 1291, 1499 |
| MaeI | CTAG | 4 cut(s) | 135, 176, 344, 954 |
| MaeII | ACGT | 3 cut(s) | 64, 90, 1100 |
| MaeIII | GTNAC | 5 cut(s) | 711, 733, 1243, 1262, 1619 |
| MalI | GATC | 3 cut(s) | 70, 1341, 1557 |
| MbiI | CCGCTC | 2 cut(s) | 159, 320 |
| MboI | GATC | 3 cut(s) | 68, 1339, 1555 |
| MboII | GAAGA | 8 cut(s) | 521, 524, 606, 609, 878, 881, 1075, 1179 |
| MhlI | GDGCHC | 2 cut(s) | 240, 261 |
| Mly113I | GGCGCC | 1 cut(s) | 98 |
| MmeI | TCCRAC | 4 cut(s) | 389, 640, 1143, 1313 |
| Mph1103I | ATGCAT | 2 cut(s) | 522, 879 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1183 |
| MseI | TTAA | 8 cut(s) | 207, 221, 476, 579, 833, 992, 1076, 1302 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1514 |
| MspCI | CTTAAG | 1 cut(s) | 578 |
| MspI | CCGG | 1 cut(s) | 289 |
| MvnI | CGCG | 1 cut(s) | 300 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 10, 270, 491, 683, 848, 1045 |
| NarI | GGCGCC | 1 cut(s) | 98 |
| NdeI | CATATG | 1 cut(s) | 1084 |
| NdeII | GATC | 3 cut(s) | 68, 1339, 1555 |
| NheI | GCTAGC | 1 cut(s) | 953 |
| NlaIII | CATG | 8 cut(s) | 196, 341, 524, 765, 881, 1392, 1519, 1753 |
| NlaIV | GGNNCC | 7 cut(s) | 99, 369, 537, 894, 1451, 1606, 1747 |
| NmuCI | GTSAC | 3 cut(s) | 711, 733, 1619 |
| NsiI | ATGCAT | 2 cut(s) | 522, 879 |
| NspI | RCATGY | 4 cut(s) | 524, 765, 881, 1392 |
| PagI | TCATGA | 1 cut(s) | 1515 |
| PaqCI | CACCTGC | 1 cut(s) | 1661 |
| PceI | AGGCCT | 1 cut(s) | 1660 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1183 |
| PfeI | GAWTC | 2 cut(s) | 266, 1127 |
| PluTI | GGCGCC | 1 cut(s) | 101 |
| PshBI | ATTAAT | 1 cut(s) | 207 |
| Psp124BI | GAGCTC | 1 cut(s) | 261 |
| PspEI | GGTNACC | 1 cut(s) | 1619 |
| PspFI | CCCAGC | 1 cut(s) | 1741 |
| PspN4I | GGNNCC | 7 cut(s) | 99, 369, 537, 894, 1451, 1606, 1747 |
| PstI | CTGCAG | 2 cut(s) | 1135, 1672 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1208 |
| RsaI | GTAC | 5 cut(s) | 369, 730, 978, 1378, 1456 |
| RsaNI | GTAC | 5 cut(s) | 368, 729, 977, 1377, 1455 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1514 |
| SacI | GAGCTC | 1 cut(s) | 261 |
| SaqAI | TTAA | 8 cut(s) | 207, 221, 476, 579, 833, 992, 1076, 1302 |
| Sau3AI | GATC | 3 cut(s) | 68, 1339, 1555 |
| ScaI | AGTACT | 2 cut(s) | 978, 1378 |
| SduI | GDGCHC | 2 cut(s) | 240, 261 |
| SfaNI | GCATC | 8 cut(s) | 110, 273, 481, 758, 838, 1214, 1291, 1499 |
| SfcI | CTRYAG | 3 cut(s) | 1131, 1209, 1668 |
| SfoI | GGCGCC | 1 cut(s) | 99 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1514 |
| SmlI | CTYRAG | 1 cut(s) | 578 |
| SmoI | CTYRAG | 1 cut(s) | 578 |
| SpeI | ACTAGT | 1 cut(s) | 343 |
| SseBI | AGGCCT | 1 cut(s) | 1660 |
| SspDI | GGCGCC | 1 cut(s) | 97 |
| SspMI | CTAG | 4 cut(s) | 135, 176, 344, 954 |
| SstI | GAGCTC | 1 cut(s) | 261 |
| StuI | AGGCCT | 1 cut(s) | 1660 |
| StyI | CCWWGG | 1 cut(s) | 1052 |
| TaaI | ACNGT | 7 cut(s) | 372, 474, 733, 831, 1400, 1513, 1530 |
| TaiI | ACGT | 3 cut(s) | 67, 93, 1103 |
| TaqI | TCGA | 4 cut(s) | 67, 393, 644, 783 |
| TaqII | GACCGA | 1 cut(s) | 154 |
| TatI | WGTACW | 2 cut(s) | 976, 1376 |
| TauI | GCSGC | 7 cut(s) | 126, 156, 159, 230, 355, 455, 812 |
| TfiI | GAWTC | 2 cut(s) | 266, 1127 |
| Tru1I | TTAA | 8 cut(s) | 207, 221, 476, 579, 833, 992, 1076, 1302 |
| Tru9I | TTAA | 8 cut(s) | 207, 221, 476, 579, 833, 992, 1076, 1302 |
| TscAI | CASTG | 6 cut(s) | 133, 362, 738, 951, 1491, 1516 |
| TseFI | GTSAC | 3 cut(s) | 711, 733, 1619 |
| TseI | GCWGC | 4 cut(s) | 965, 1279, 1321, 1667 |
| Tsp45I | GTSAC | 3 cut(s) | 711, 733, 1619 |
| TspDTI | ATGAA | 3 cut(s) | 444, 801, 1196 |
| TspGWI | ACGGA | 3 cut(s) | 120, 258, 1442 |
| TspRI | CASTG | 6 cut(s) | 133, 362, 738, 951, 1491, 1516 |
| Vha464I | CTTAAG | 1 cut(s) | 578 |
| VspI | ATTAAT | 1 cut(s) | 207 |
| XapI | RAATTY | 8 cut(s) | 446, 496, 803, 853, 994, 1183, 1560, 1573 |
| XceI | RCATGY | 4 cut(s) | 524, 765, 881, 1392 |
| XmiI | GTMKAC | 2 cut(s) | 469, 826 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1183 |
| XspI | CTAG | 4 cut(s) | 135, 176, 344, 954 |
| ZrmI | AGTACT | 2 cut(s) | 978, 1378 |
| Zsp2I | ATGCAT | 2 cut(s) | 522, 879 |