Rmu_sc0002105.1_g000025

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002105.1
OG0005295
Physical Location & Seq
Reverse (-)
123601 .. 129593
5993 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3246 bp
atggaaatttttaagaacaataaggatactctagatcttgaagcgcaccggatctctccttctcttgatgaaccaatccccttcttctccagaaacgcactgattgcgccgcctctacaaggtacaagattttggaggtctgagcaaggaaggatgagagtgagttcgacgatcaatgagggagggggagcggcggcggcttcggcttctagggacgcggaagggctgttccgcaccaaaggcatcaccgagattcgcaatgtcgaatcgacgacgcggaagcagatccaagccaagaaggaggagctccgtcaactcgtcggcactcgctaccgcgacctcatcgactccgccgactccatcgtcctcatgaagcgctccgcccactccatctcccgcaacctctcctccgtccaccacgccatcatccactccctctctctttcttcttcttcttcttcttctctctccaattccaagtcctcctccgactcctccgtccgcatctacggaatcgcctgccgggtcaagtacctggtcgacacccccgagaacatctggggctgcctcgacgagtccatgttcctcgagtccgccgcccgctacgtccgcgccagccacgtccacttcaccctcaccaccctccacaagcccttcctctctcactttcctctcctccagcaccaatggcagatcgtcgacagcttcaagtcccagatctcccagcgcgcccgcgaccgcctctccgatcaccgccaatccaacctccccgtctcctcctacgccgacgctttggctgccgtcgctctcatcgacgacctccctccccaacacgtcctctccctcttcctcgacacccgcaaggcctgggtttcccacattttgaatacttccacttcctcagttgaatgctcccaagttgtttcggtcctttgcgaggccctcagggttattcaggtcactgtcggccaggttggggaattgtttctccgggttttcaacgacatgcccctgttttacaaggtggtcttgggttgccctcctgcatctcaactcttcggcggcattcccaacccagatgaggaggtcaagctttggaattccttcagggacaagttggagtctgccatggtaatgctggacaaagatgatattgcgaaagcttcttcttcatggcttgcggactgtggagctcagatggtggataagatcaatggcaggtatctcattgatgctattggcagcggcaaagagcttgcctccgccgagaggttgataagggagactatgaatagcaaagaggtcttggaaggaagcttggactggctcaagaaagttttcggctcccaaattgacctgccatggagtagaatgagtgaacttgttctgggagatgattcagacctctgggacagtatctttgaaagtggatttgttgggaggatgaaggtgattgtggactccaggtttgagaagctcaagacagctgccaatattaatgatggtgaggccattgaattcctaggtgcaggtggtggagtttggtttatagaatccaaatccaatagtaagaaggctactgctctgccatgtgaagagaactgtctcaatttctatttcggtcctcaagttagtgatattagggatgcggtggatagcagctgtcaggatgtgcttgatgacctcctctcttttctggaatctccaaaggcagctgtcagattaaagaatctggcaccctatctacaagacaagtgtttccaaactatatccatcatattggagcaactgagtagtgagcttgataatttggaaaagggcagcaacaagcaaaagctgctaaccgttgaaagggctctattcattgggagactcttgtttgcattgcagaatcactccaagcacattcccttagtacttggccctccaaggtcttgggtgaatgaaagtgagtctgcagttttcgacaagttaccatccttattgagacagtctagagcccccaccgattctcatgtgcttgatagccccttgggctctaaaagacacacctcatctgctactgctgcactgcttggagccagccaaagtgcaagccctaaacttgaagagcttaatgtgactatgcgaaatctccgcattagagcgcacactttctggatgacttggctatccgatgagctctcagttatacttgcccgtgatctagaaaaggacgatgctttgtcatcctcaactcccctgaggggttgggaagagacagtagttaggcaagagcagtctgatgataaccaatcagagatgaaaatatggctcccatccatgccttctctctatgttgtctcatttctattccgtatatgtgaagaagttcatcgaataggaggtcatgtccttgacaaaataattctgcaaaaatttgcattactactgttggaaaaggtcattggcatttatggcgacttcctttctaatctagatgctggtgggtctcaagtgtcagaaaaaggagttttgcagattttgttagacttgagatttgtttttgatgtcctctctgggggtgattctaatttgaatgaggagcggaagacaaaaagtactttcagaaggaagcaggaccaaagccgtatgaagtcagctactagagagcgttttgatgggttgatacatcatttttcacaaagattggatcccatagactggcttacgtacgagccgtatctctgggaaaatgagaagcagtcctacctccggcatgccgtcctttttggattctttgtgcaacttaatcgcatgtacacagacactgttcagaaacttcctactaattcagagtccaatatcatgagatgctcttcagttcctcgctttaagtaccttccaatcagtgccccagcattgtcttcaagggggacagcagctaagacatccattcaaacatcttccgatgatatttcttcaagaagtagctggaaagcttatacaaatggagagctgtccagaagtattgatttggatgataactcaagttttggggttgcagtaccaatcttaaaatctttcatgcaggctggaagtagatttggagagagcacattaaaactgggatccatgctaacagatgggcaagtgggcatattcaaggatagatcagccgccgccatgtcgacatttggtgacattctacctgcccatgctgcaggtcttctttcatcattcacagcttccagatcagactcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

1081

Amino Acids

120.41

Weight (kDa)

6.35

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 68 - 141 3.8e-14 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1520
AasI GACNNNNNNGTC 2 cut(s) 362, 497
Acc36I ACCTGC 5 cut(s) 1209, 1365, 1520, 3194, 3199
AccB1I GGYRCC 1 cut(s) 1735
AccB7I CCANNNNNTGG 1 cut(s) 2703
AccBSI CCGCTC 2 cut(s) 191, 2587
AccI GTMKAC 3 cut(s) 540, 699, 3170
AccII CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
AclWI GGATC 6 cut(s) 59, 280, 2687, 2700, 3105, 3118
AcoI YGGCCR 1 cut(s) 967
AcsI RAATTY 4 cut(s) 6, 1099, 1517, 2417
AcuI CTGAAG 2 cut(s) 1090, 2844
AfaI GTAC 8 cut(s) 124, 533, 1917, 2602, 2714, 2801, 2879, 3048
AfeI AGCGCT 1 cut(s) 377
AflIII ACRYGT 1 cut(s) 832
AjiI CACGTC 2 cut(s) 622, 835
AjnI CCWGG 4 cut(s) 534, 866, 969, 1463
AjuI GAANNNNNNNTTGG 2 cut(s) 2430, 2462
AloI GAACNNNNNNTCC 2 cut(s) 212, 244
Alw21I GWGCWC 4 cut(s) 309, 1195, 2184, 3098
Alw26I GTCTC 8 cut(s) 778, 1277, 1610, 1864, 1981, 2252, 2347, 2496
AlwI GGATC 6 cut(s) 59, 280, 2687, 2700, 3105, 3118
AlwNI CAGNNNCTG 1 cut(s) 2810
Ama87I CYCGRG 2 cut(s) 548, 587
Aor51HI AGCGCT 1 cut(s) 377
AoxI GGCC 5 cut(s) 864, 939, 967, 1509, 1921
ApoI RAATTY 4 cut(s) 6, 1099, 1517, 2417
ArsI GACNNNNNNTTYG 8 cut(s) 1403, 1435, 1451, 1483, 2371, 2403, 2522, 2554
AseI ATTAAT 1 cut(s) 1497
Asp700I GAANNNNTTC 5 cut(s) 984, 1103, 1337, 1383, 2370
AspA2I CCTAGG 1 cut(s) 1522
AspLEI GCGC 7 cut(s) 46, 109, 378, 614, 729, 731, 2149
AspS9I GGNCC 5 cut(s) 928, 940, 1622, 1922, 2620
AsuC2I CCSGG 2 cut(s) 524, 992
AsuHPI GGTGA 9 cut(s) 238, 622, 628, 743, 1462, 1517, 1951, 2576, 3191
AvaI CYCGRG 2 cut(s) 548, 587
AvaII GGWCC 3 cut(s) 928, 1622, 2620
AvrII CCTAGG 1 cut(s) 1522
AxyI CCTNAGG 2 cut(s) 944, 2243
BaeGI GKGCMC 1 cut(s) 2896
BamHI GGATCC 2 cut(s) 2692, 3110
BanI GGYRCC 1 cut(s) 1735
BanII GRGCYC 6 cut(s) 309, 1195, 1858, 2002, 2039, 2184
BarI GAAGNNNNNNTAC 2 cut(s) 2732, 2764
BbsI GAAGAC 3 cut(s) 2597, 2898, 3200
Bbv12I GWGCWC 4 cut(s) 309, 1195, 2184, 3098
BceAI ACGGC 4 cut(s) 785, 2613, 2704, 2747
BcgI CGANNNNNNTGC 2 cut(s) 2774, 2808
BciT130I CCWGG 4 cut(s) 536, 868, 971, 1465
BciVI GTATCC 1 cut(s) 19
BcnI CCSGG 2 cut(s) 524, 992
BcoDI GTCTC 8 cut(s) 778, 1277, 1610, 1864, 1981, 2252, 2347, 2496
BfaI CTAG 7 cut(s) 32, 210, 1523, 1995, 2207, 2477, 2646
BfmI CTRYAG 2 cut(s) 1956, 3201
BfoI RGCGCY 1 cut(s) 379
BfuAI ACCTGC 5 cut(s) 1209, 1365, 1520, 3194, 3199
BfuI GTATCC 1 cut(s) 19
BglI GCCNNNNNGGC 1 cut(s) 2034
BglII AGATCT 2 cut(s) 34, 717
BlnI CCTAGG 1 cut(s) 1522
BmcAI AGTACT 2 cut(s) 1917, 2602
Bme1390I CCNGG 6 cut(s) 524, 536, 868, 971, 992, 1465
Bme18I GGWCC 3 cut(s) 928, 1622, 2620
BmeT110I CYCGRG 2 cut(s) 548, 587
BmgBI CACGTC 2 cut(s) 622, 835
BmgT120I GGNCC 5 cut(s) 928, 940, 1622, 1922, 2620
BmiI GGNNCC 6 cut(s) 1345, 1737, 2080, 2315, 2694, 3112
BmrFI CCNGG 6 cut(s) 524, 536, 868, 971, 992, 1465
BmrI ACTGGG 1 cut(s) 3116
BmsI GCATC 8 cut(s) 252, 513, 1055, 1222, 1636, 2209, 2470, 2843
BmuI ACTGGG 1 cut(s) 3116
BpiI GAAGAC 3 cut(s) 2597, 2898, 3200
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 3 cut(s) 73, 662, 1447
BpuEI CTTGAG 6 cut(s) 1313, 1463, 1611, 2478, 2554, 3013
BpuMI CCSGG 2 cut(s) 524, 992
BsaAI YACGTR 1 cut(s) 2712
BsaI GGTCTC 1 cut(s) 2496
BsaJI CCNNGG 6 cut(s) 867, 1128, 1361, 1522, 1928, 2031
BsaWI WCCGGW 1 cut(s) 48
Bse1I ACTGG 3 cut(s) 1328, 2708, 3111
Bse21I CCTNAGG 2 cut(s) 944, 2243
Bse3DI GCAATG 2 cut(s) 265, 1883
BseBI CCWGG 4 cut(s) 536, 868, 971, 1465
BseDI CCNNGG 6 cut(s) 867, 1128, 1361, 1522, 1928, 2031
BseMI GCAATG 2 cut(s) 265, 1883
BseMII CTCAG 7 cut(s) 132, 915, 958, 1208, 1781, 2199, 2234
BseNI ACTGG 3 cut(s) 1328, 2708, 3111
BsePI GCGCGC 1 cut(s) 727
BseRI GAGGAG 9 cut(s) 317, 397, 475, 484, 665, 766, 1097, 1676, 2597
BseSI GKGCMC 1 cut(s) 2896
BseYI CCCAGC 2 cut(s) 723, 2896
BsgI GTGCAG 2 cut(s) 1548, 2052
Bsh1236I CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
Bsh1285I CGRYCG 1 cut(s) 739
BshFI GGCC 5 cut(s) 866, 941, 969, 1511, 1923
BshNI GGYRCC 1 cut(s) 1735
BsiEI CGRYCG 1 cut(s) 739
BsiHKAI GWGCWC 4 cut(s) 309, 1195, 2184, 3098
BsiHKCI CYCGRG 2 cut(s) 548, 587
BsiSI CCGG 4 cut(s) 49, 523, 991, 2755
BsiWI CGTACG 1 cut(s) 2712
BslFI GGGAC 5 cut(s) 227, 697, 1124, 1424, 2929
BsmAI GTCTC 8 cut(s) 778, 1277, 1610, 1864, 1981, 2252, 2347, 2496
BsmBI CGTCTC 1 cut(s) 778
BsmFI GGGAC 5 cut(s) 227, 697, 1124, 1424, 2929
BsmI GAATGC 2 cut(s) 914, 1065
BsnI GGCC 5 cut(s) 866, 941, 969, 1511, 1923
Bso31I GGTCTC 1 cut(s) 2496
BsoBI CYCGRG 2 cut(s) 548, 587
Bsp1286I GDGCHC 8 cut(s) 309, 1195, 1858, 2002, 2039, 2184, 2896, 3098
Bsp1407I TGTACA 1 cut(s) 2799
Bsp19I CCATGG 2 cut(s) 1128, 1361
BspANI GGCC 5 cut(s) 866, 941, 969, 1511, 1923
BspCNI CTCAG 7 cut(s) 133, 914, 957, 1207, 1782, 2198, 2235
BspFNI CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
BspHI TCATGA 2 cut(s) 369, 2847
BspLI GGNNCC 6 cut(s) 1345, 1737, 2080, 2315, 2694, 3112
BspMAI CTGCAG 2 cut(s) 1960, 3205
BspMI ACCTGC 5 cut(s) 1209, 1365, 1520, 3194, 3199
BspPI GGATC 6 cut(s) 59, 280, 2687, 2700, 3105, 3118
BspQI GCTCTTC 2 cut(s) 2103, 2863
BspT107I GGYRCC 1 cut(s) 1735
BspTNI GGTCTC 1 cut(s) 2496
BsrBI CCGCTC 2 cut(s) 191, 2587
BsrDI GCAATG 2 cut(s) 265, 1883
BsrGI TGTACA 1 cut(s) 2799
BsrI ACTGG 3 cut(s) 1328, 2708, 3111
BssECI CCNNGG 6 cut(s) 867, 1128, 1361, 1522, 1928, 2031
BssHII GCGCGC 1 cut(s) 727
BssT1I CCWWGG 5 cut(s) 1128, 1361, 1522, 1928, 2031
Bst2UI CCWGG 4 cut(s) 536, 868, 971, 1465
Bst4CI ACNGT 9 cut(s) 964, 1187, 1415, 1604, 1846, 1992, 2263, 2433, 2812
Bst6I CTCTTC 6 cut(s) 851, 1061, 1590, 2103, 2250, 2863
BstAPI GCANNNNNTGC 2 cut(s) 104, 1837
BstAUI TGTACA 1 cut(s) 2799
BstBAI YACGTR 1 cut(s) 2712
BstDEI CTNAG 9 cut(s) 141, 901, 944, 1194, 1790, 1912, 2185, 2243, 2925
BstDSI CCRYGG 2 cut(s) 1128, 1361
BstENI CCTNNNNNAGG 2 cut(s) 117, 935
BstFNI CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
BstH2I RGCGCY 1 cut(s) 379
BstHHI GCGC 7 cut(s) 46, 109, 378, 614, 729, 731, 2149
BstMAI GTCTC 8 cut(s) 778, 1277, 1610, 1864, 1981, 2252, 2347, 2496
BstMCI CGRYCG 1 cut(s) 739
BstNI CCWGG 4 cut(s) 536, 868, 971, 1465
BstNSI RCATGY 3 cut(s) 1009, 2762, 2800
BstSCI CCNGG 6 cut(s) 522, 534, 866, 969, 990, 1463
BstSFI CTRYAG 2 cut(s) 1956, 3201
BstSLI GKGCMC 1 cut(s) 2896
BstSNI TACGTA 1 cut(s) 2712
BstUI CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
BstV2I GAAGAC 3 cut(s) 2597, 2898, 3200
BstX2I RGATCY 6 cut(s) 34, 51, 285, 717, 2692, 3110
BstXI CCANNNNNNTGG 2 cut(s) 1780, 1935
BstYI RGATCY 6 cut(s) 34, 51, 285, 717, 2692, 3110
Bsu36I CCTNAGG 2 cut(s) 944, 2243
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 5 cut(s) 866, 941, 969, 1511, 1923
BtgI CCRYGG 2 cut(s) 1128, 1361
BtrI CACGTC 2 cut(s) 622, 835
BtsI GCAGTG 1 cut(s) 2069
BtsIMutI CAGTG 5 cut(s) 98, 960, 2069, 2808, 2896
BveI ACCTGC 5 cut(s) 1209, 1365, 1520, 3194, 3199
CaiI CAGNNNCTG 1 cut(s) 2810
CciI TCATGA 2 cut(s) 369, 2847
CfoI GCGC 7 cut(s) 46, 109, 378, 614, 729, 731, 2149
Cfr13I GGNCC 5 cut(s) 928, 940, 1622, 1922, 2620
CseI GACGC 3 cut(s) 224, 283, 797
CsiI ACCWGGT 1 cut(s) 534
Csp6I GTAC 8 cut(s) 123, 532, 1916, 2601, 2713, 2800, 2878, 3047
CviQI GTAC 8 cut(s) 123, 532, 1916, 2601, 2713, 2800, 2878, 3047
DdeI CTNAG 9 cut(s) 141, 901, 944, 1194, 1790, 1912, 2185, 2243, 2925
DrdI GACNNNNNNGTC 2 cut(s) 362, 497
DseDI GACNNNNNNGTC 2 cut(s) 362, 497
EaeI YGGCCR 1 cut(s) 967
Eam1104I CTCTTC 6 cut(s) 851, 1061, 1590, 2103, 2250, 2863
EarI CTCTTC 6 cut(s) 851, 1061, 1590, 2103, 2250, 2863
EciI GGCGGA 4 cut(s) 340, 370, 583, 1252
Ecl136II GAGCTC 3 cut(s) 307, 1193, 2182
Eco105I TACGTA 1 cut(s) 2712
Eco130I CCWWGG 5 cut(s) 1128, 1361, 1522, 1928, 2031
Eco147I AGGCCT 1 cut(s) 866
Eco24I GRGCYC 6 cut(s) 309, 1195, 1858, 2002, 2039, 2184
Eco31I GGTCTC 1 cut(s) 2496
Eco47I GGWCC 3 cut(s) 928, 1622, 2620
Eco47III AGCGCT 1 cut(s) 377
Eco53kI GAGCTC 3 cut(s) 307, 1193, 2182
Eco57I CTGAAG 2 cut(s) 1090, 2844
Eco81I CCTNAGG 2 cut(s) 944, 2243
Eco88I CYCGRG 2 cut(s) 548, 587
EcoICRI GAGCTC 3 cut(s) 307, 1193, 2182
EcoNI CCTNNNNNAGG 2 cut(s) 117, 935
EcoO109I RGGNCCY 1 cut(s) 940
EcoRI GAATTC 2 cut(s) 1099, 1517
EcoRII CCWGG 4 cut(s) 534, 866, 969, 1463
EcoT14I CCWWGG 5 cut(s) 1128, 1361, 1522, 1928, 2031
EcoT38I GRGCYC 6 cut(s) 309, 1195, 1858, 2002, 2039, 2184
ErhI CCWWGG 5 cut(s) 1128, 1361, 1522, 1928, 2031
Esp3I CGTCTC 1 cut(s) 778
FalI AAGNNNNNCTT 2 cut(s) 1013, 1045
FaqI GGGAC 5 cut(s) 227, 697, 1124, 1424, 2929
FauI CCCGC 4 cut(s) 404, 608, 740, 866
FblI GTMKAC 3 cut(s) 540, 699, 3170
FriOI GRGCYC 6 cut(s) 309, 1195, 1858, 2002, 2039, 2184
FspBI CTAG 7 cut(s) 32, 210, 1523, 1995, 2207, 2477, 2646
GlaI GCGC 7 cut(s) 45, 108, 377, 613, 728, 730, 2148
GsaI CCCAGC 2 cut(s) 727, 2900
GsuI CTGGAG 3 cut(s) 73, 662, 1447
HaeII RGCGCY 1 cut(s) 379
HaeIII GGCC 5 cut(s) 866, 941, 969, 1511, 1923
HapII CCGG 4 cut(s) 49, 523, 991, 2755
HgaI GACGC 3 cut(s) 224, 283, 797
HhaI GCGC 7 cut(s) 46, 109, 378, 614, 729, 731, 2149
Hin6I GCGC 7 cut(s) 44, 107, 376, 612, 727, 729, 2147
HinP1I GCGC 7 cut(s) 44, 107, 376, 612, 727, 729, 2147
HincII GTYRAC 4 cut(s) 314, 541, 700, 3171
HindII GTYRAC 4 cut(s) 314, 541, 700, 3171
HindIII AAGCTT 4 cut(s) 1091, 1161, 1315, 2979
HpaII CCGG 4 cut(s) 49, 523, 991, 2755
HphI GGTGA 9 cut(s) 238, 622, 628, 743, 1462, 1517, 1951, 2576, 3191
Hpy166II GTNNAC 9 cut(s) 314, 415, 541, 625, 700, 1379, 1459, 2802, 3171
Hpy8I GTNNAC 9 cut(s) 314, 415, 541, 625, 700, 1379, 1459, 2802, 3171
Hpy99I CGWCG 9 cut(s) 172, 274, 277, 323, 575, 701, 791, 806, 818
HpyCH4III ACNGT 9 cut(s) 964, 1187, 1415, 1604, 1846, 1992, 2263, 2433, 2812
HpyCH4IV ACGT 4 cut(s) 606, 621, 834, 2711
HpyF3I CTNAG 9 cut(s) 141, 901, 944, 1194, 1790, 1912, 2185, 2243, 2925
HpySE526I ACGT 4 cut(s) 606, 621, 834, 2711
HspAI GCGC 7 cut(s) 44, 107, 376, 612, 727, 729, 2147
LguI GCTCTTC 2 cut(s) 2103, 2863
LweI GCATC 8 cut(s) 252, 513, 1055, 1222, 1636, 2209, 2470, 2843
MabI ACCWGGT 1 cut(s) 534
MaeI CTAG 7 cut(s) 32, 210, 1523, 1995, 2207, 2477, 2646
MaeII ACGT 4 cut(s) 606, 621, 834, 2711
MaeIII GTNAC 4 cut(s) 958, 1971, 2119, 3179
MbiI CCGCTC 2 cut(s) 191, 2587
MflI RGATCY 6 cut(s) 34, 51, 285, 717, 2692, 3110
MhlI GDGCHC 8 cut(s) 309, 1195, 1858, 2002, 2039, 2184, 2896, 3098
MmeI TCCRAC 4 cut(s) 513, 786, 1098, 2415
MroXI GAANNNNTTC 5 cut(s) 984, 1103, 1337, 1383, 2370
MseI TTAA 8 cut(s) 12, 1497, 1724, 2115, 2790, 2874, 3056, 3101
MslI CAYNNNNRTG 1 cut(s) 1133
MspA1I CMGCKG 4 cut(s) 1245, 1487, 1662, 1715
MspI CCGG 4 cut(s) 49, 523, 991, 2755
MspR9I CCNGG 6 cut(s) 524, 536, 868, 971, 992, 1465
Mva1269I GAATGC 2 cut(s) 914, 1065
MvaI CCWGG 4 cut(s) 536, 868, 971, 1465
MvnI CGCG 6 cut(s) 218, 277, 336, 612, 729, 735
NciI CCSGG 2 cut(s) 524, 992
NcoI CCATGG 2 cut(s) 1128, 1361
NlaIV GGNNCC 6 cut(s) 1345, 1737, 2080, 2315, 2694, 3112
NmeAIII GCCGAG 1 cut(s) 1291
NmuCI GTSAC 3 cut(s) 958, 2119, 3179
NspI RCATGY 3 cut(s) 1009, 2762, 2800
PaeI GCATGC 1 cut(s) 2762
PaeR7I CTCGAG 1 cut(s) 587
PagI TCATGA 2 cut(s) 369, 2847
PaqCI CACCTGC 1 cut(s) 1520
PauI GCGCGC 1 cut(s) 727
PceI AGGCCT 1 cut(s) 866
PciSI GCTCTTC 2 cut(s) 2103, 2863
PcsI WCGNNNNNNNCGW 4 cut(s) 351, 546, 810, 2717
PctI GAATGC 2 cut(s) 914, 1065
PdmI GAANNNNTTC 5 cut(s) 984, 1103, 1337, 1383, 2370
Pfl23II CGTACG 1 cut(s) 2712
PflMI CCANNNNNTGG 1 cut(s) 2703
Ppu21I YACGTR 1 cut(s) 2712
PshBI ATTAAT 1 cut(s) 1497
Psp124BI GAGCTC 3 cut(s) 309, 1195, 2184
Psp6I CCWGG 4 cut(s) 534, 866, 969, 1463
PspFI CCCAGC 2 cut(s) 723, 2896
PspGI CCWGG 4 cut(s) 534, 866, 969, 1463
PspLI CGTACG 1 cut(s) 2712
PspN4I GGNNCC 6 cut(s) 1345, 1737, 2080, 2315, 2694, 3112
PspPI GGNCC 5 cut(s) 928, 940, 1622, 1922, 2620
PspXI VCTCGAGB 1 cut(s) 587
PstI CTGCAG 2 cut(s) 1960, 3205
PstNI CAGNNNCTG 1 cut(s) 2810
PsuI RGATCY 6 cut(s) 34, 51, 285, 717, 2692, 3110
PteI GCGCGC 1 cut(s) 727
PvuII CAGCTG 3 cut(s) 1487, 1662, 1715
RsaI GTAC 8 cut(s) 124, 533, 1917, 2602, 2714, 2801, 2879, 3048
RsaNI GTAC 8 cut(s) 123, 532, 1916, 2601, 2713, 2800, 2878, 3047
RseI CAYNNNNRTG 1 cut(s) 1133
SacI GAGCTC 3 cut(s) 309, 1195, 2184
SalI GTCGAC 3 cut(s) 539, 698, 3169
SapI GCTCTTC 2 cut(s) 2103, 2863
SaqAI TTAA 8 cut(s) 12, 1497, 1724, 2115, 2790, 2874, 3056, 3101
Sau96I GGNCC 5 cut(s) 928, 940, 1622, 1922, 2620
ScaI AGTACT 2 cut(s) 1917, 2602
ScrFI CCNGG 6 cut(s) 524, 536, 868, 971, 992, 1465
SduI GDGCHC 8 cut(s) 309, 1195, 1858, 2002, 2039, 2184, 2896, 3098
SexAI ACCWGGT 1 cut(s) 534
SfaNI GCATC 8 cut(s) 252, 513, 1055, 1222, 1636, 2209, 2470, 2843
SfcI CTRYAG 2 cut(s) 1956, 3201
Sfr274I CTCGAG 1 cut(s) 587
SinI GGWCC 3 cut(s) 928, 1622, 2620
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 1 cut(s) 1133
SmlI CTYRAG 7 cut(s) 587, 1328, 1478, 1626, 2493, 2533, 3028
SmoI CTYRAG 7 cut(s) 587, 1328, 1478, 1626, 2493, 2533, 3028
SnaBI TACGTA 1 cut(s) 2712
SphI GCATGC 1 cut(s) 2762
SseBI AGGCCT 1 cut(s) 866
SspI AATATT 1 cut(s) 1495
SspMI CTAG 7 cut(s) 32, 210, 1523, 1995, 2207, 2477, 2646
SstI GAGCTC 3 cut(s) 309, 1195, 2184
StuI AGGCCT 1 cut(s) 866
StyD4I CCNGG 6 cut(s) 522, 534, 866, 969, 990, 1463
StyI CCWWGG 5 cut(s) 1128, 1361, 1522, 1928, 2031
TaaI ACNGT 9 cut(s) 964, 1187, 1415, 1604, 1846, 1992, 2263, 2433, 2812
TaiI ACGT 4 cut(s) 609, 624, 837, 2714
TaqII GACCGA 2 cut(s) 916, 1610
TatI WGTACW 3 cut(s) 1915, 2600, 2799
TauI GCSGC 9 cut(s) 112, 194, 197, 200, 599, 1065, 1248, 3161, 3164
Tru1I TTAA 8 cut(s) 12, 1497, 1724, 2115, 2790, 2874, 3056, 3101
Tru9I TTAA 8 cut(s) 12, 1497, 1724, 2115, 2790, 2874, 3056, 3101
TscAI CASTG 5 cut(s) 105, 967, 2076, 2815, 2896
TseFI GTSAC 3 cut(s) 958, 2119, 3179
Tsp45I GTSAC 3 cut(s) 958, 2119, 3179
TspGWI ACGGA 5 cut(s) 299, 400, 487, 525, 2345
TspRI CASTG 5 cut(s) 105, 967, 2076, 2815, 2896
Van91I CCANNNNNTGG 1 cut(s) 2703
VpaK11BI GGWCC 3 cut(s) 928, 1622, 2620
VspI ATTAAT 1 cut(s) 1497
XagI CCTNNNNNAGG 2 cut(s) 117, 935
XapI RAATTY 4 cut(s) 6, 1099, 1517, 2417
XbaI TCTAGA 4 cut(s) 31, 1994, 2206, 2476
XceI RCATGY 3 cut(s) 1009, 2762, 2800
XcmI CCANNNNNNNNNTGG 1 cut(s) 1135
XhoI CTCGAG 1 cut(s) 587
XmaJI CCTAGG 1 cut(s) 1522
XmiI GTMKAC 3 cut(s) 540, 699, 3170
XmnI GAANNNNTTC 5 cut(s) 984, 1103, 1337, 1383, 2370
XspI CTAG 7 cut(s) 32, 210, 1523, 1995, 2207, 2477, 2646
ZrmI AGTACT 2 cut(s) 1917, 2602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.