Rmu_sc0002115.1_g000004

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002115.1
OG0011045
Physical Location & Seq
Reverse (-)
19784 .. 24789
5006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002115.1_g000004.1.cds

Sequence Viewer

Length: 1899 bp
atggcagaccctcactatgtgcatcttgacgatgtagatctacaggaagaggatgaagaagcctcagaagaaccatccgtcatcggcgacgttgaagactcagaacaagaagacgaagaagaagaagaaccagacgcccaaacggatcccaattatgctctctatctttccagaatgggacccactcatgaggccgaagaagccgactcggattttgaacggcatctggtcagaaccgcttgctttctgagcggcggcggcggcggctgcgacggcaagcggaggagaatcggaaggcaggaaacggcggcgtttgacaccggagagagctctcagagcagtcagtggaatccgagtgaaattgatggcctgttttgcccaatttgcttggaggcttggactaatgacggtgatcactacatctgctgtcttccttgtggacacattttcggtatgtcctgcatcgaaaaatggctaggccagagtaaaagacagggaaagtgtcctcaatgcaatgccaaatgcaagttgaatgatgtcaggaaacttttcacgtcacgagttatttctgttgacgaagaatcacaaaagaggattcgttcacttgaggctaaatgtgcttcttttgagaaggagcgagcagaatggcataagagggaggcagtattgctaaagggacagcatgtactagaactcaaaattcgactacttatggagagcaaagcatcaggatcaatcaatgctactgggacctttgaaagaagattcgtatctggtaataacatcttagagggaaggtcttatgggctaacatttggctctaatacctgtggacaagcatctccttgcagcttcaaattagagaaggagttacctgtagctggtgctcatttgtttgacgttgatgcgtctaaccaaattttgttaatttcgcgaaggcatgctgggataggtggaaaagatgtgcttaccaaaatgagcctgatacctccatatgacagagatgatattgttcttcctagctctttaaattctatcagggacctacgtctttctccttctaacactaaccttgcactctttgcttgcctagggaagaaattggcagttctcagtacggagaacaacaacatcattgtttcctatgacgtaccggctgctgcttggacatgctcatgggatctcaacgattcaaattatatgtatgctggattacagaatggctatcttctggtgtttgacatgcgccaaacctcagggcctgttgaatccctgaaggggctgacaagaaacccaattcataccgtgcattccctttcatataattcagctcttcccactggtgttagaacagtgatgtccgcatcgtcaattggcttatgtctctggaattttggtggtgctgcaaaggggccaattttggtccctgaaacagagaaccaaggagtttgtatatctcttgcatattgccctagaacagatgacattgttgcttcctatcgccccaaagtcgagttttctgatgaggcagttcttacacaaccaactccttcacgtgccatcggacaaggaacagttggttcccatgttcttttaaagagagcaggcagcagcagtcattttctaaagttgggatcttcatccggcaacgtgtgtgatatcggactgccaaaatctgcaattatcaacatagaaaattgtggcagtttgtttgcatctgaagataaactatcttctgaactagttttagaagagctgtcgtcttttactactgttcagcgccttaacttacagcgaagtcctgttcaggatgtgaagtacacatccttcttaaggaaaggtctcctcagttgtttgaatggtaacacgctgcaactcttcagtaccaagctttcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000724 GO:0000725 GO:0002039 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0007093 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0010564 GO:0010948 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0031297 GO:0031570 GO:0031571 GO:0031974 GO:0031981 GO:0032446 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045005 GO:0045786 GO:0045930 GO:0046483 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0051726 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080134 GO:0080135 GO:0090304 GO:0090734 GO:0097371 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901976 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902806 GO:1902807 GO:1903047 GO:2000001 GO:2000045 GO:2000134 GO:2001020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

632

Amino Acids

69.25

Weight (kDa)

5.27

Isoelectric Point (pI)

60.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011045)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03450 AT5G03750
fragaria_vesca FvH4_6g16560 FvH4_6g16560
malus_domestica MD12G1109200.v1.1
prunus_persica Prupe.7G127800_v2.0.a1
pyrus_communis pycom12g10940
rosa_chinensis RchiOBHm_Chr3g0470481
rosa_laevigata RLG00000024263
rosa_multiflora Rmu_sc0002115.1_g000004 Rmu_sc0003381.1_g000011
rosa_roxburghii Rroxscaffold_4G00302270 Rroxscaffold_6G00410770
rosa_rugosa Rorug03G0109400 Rorug03G0109500
rosa_samantha Rh3AG159800 Rh3BG184300 Rh3CG174800 Rh3DG190600
rosa_wichuraiana Rw3G015120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 252
AccII CGCG 1 cut(s) 934
AciI CCGC 9 cut(s) 237, 252, 255, 258, 261, 264, 280, 308, 1362
AclWI GGATC 5 cut(s) 140, 153, 739, 1188, 1642
AcsI RAATTY 4 cut(s) 699, 918, 1030, 1390
AcuI CTGAAG 3 cut(s) 1295, 1740, 1864
AcvI CACGTG 1 cut(s) 1556
AcyI GRCGYC 1 cut(s) 135
AdeI CACNNNGTG 1 cut(s) 19
AfaI GTAC 5 cut(s) 687, 1117, 1152, 1820, 1885
AfiI CCNNNNNNNGG 3 cut(s) 881, 1278, 1833
AflII CTTAAG 1 cut(s) 1831
AflIII ACRYGT 1 cut(s) 1650
AgsI TTSAA 8 cut(s) 95, 218, 532, 758, 856, 1194, 1268, 1858
AhlI ACTAGT 1 cut(s) 1741
AjiI CACGTC 1 cut(s) 555
AluBI AGCT 7 cut(s) 330, 852, 881, 1023, 1331, 1756, 1891
AluI AGCT 7 cut(s) 330, 852, 881, 1023, 1331, 1756, 1891
Alw21I GWGCWC 2 cut(s) 332, 889
Alw26I GTCTC 2 cut(s) 1388, 1847
AlwI GGATC 5 cut(s) 140, 153, 739, 1188, 1642
AlwNI CAGNNNCTG 1 cut(s) 1262
AoxI GGCC 5 cut(s) 192, 367, 478, 1259, 1412
ApeKI GCWGC 8 cut(s) 267, 849, 1157, 1160, 1403, 1608, 1611, 1870
ApoI RAATTY 4 cut(s) 699, 918, 1030, 1390
ArsI GACNNNNNNTTYG 2 cut(s) 197, 229
Asp700I GAANNNNTTC 1 cut(s) 548
AspA2I CCTAGG 1 cut(s) 1090
AspLEI GCGC 2 cut(s) 1248, 1782
AspS9I GGNCC 6 cut(s) 179, 750, 1042, 1259, 1412, 1423
AsuHPI GGTGA 1 cut(s) 422
AvaII GGWCC 4 cut(s) 179, 750, 1042, 1423
AvrII CCTAGG 1 cut(s) 1090
AxyI CCTNAGG 1 cut(s) 1255
BamHI GGATCC 1 cut(s) 145
BanII GRGCYC 1 cut(s) 332
BarI GAAGNNNNNNTAC 2 cut(s) 1811, 1843
BauI CACGAG 1 cut(s) 558
BbrPI CACGTG 1 cut(s) 1556
BbsI GAAGAC 3 cut(s) 102, 117, 422
Bbv12I GWGCWC 2 cut(s) 332, 889
BbvI GCAGC 8 cut(s) 254, 861, 1144, 1147, 1390, 1620, 1623, 1857
BccI CCATC 3 cut(s) 82, 359, 1568
BceAI ACGGC 3 cut(s) 236, 289, 321
BclI TGATCA 1 cut(s) 412
BcoDI GTCTC 2 cut(s) 1388, 1847
BcuI ACTAGT 1 cut(s) 1741
BfaI CTAG 6 cut(s) 476, 689, 1020, 1091, 1473, 1742
BfmI CTRYAG 2 cut(s) 41, 876
BfoI RGCGCY 1 cut(s) 1783
BfrI CTTAAG 1 cut(s) 1831
BglII AGATCT 1 cut(s) 37
BlnI CCTAGG 1 cut(s) 1090
Bme18I GGWCC 4 cut(s) 179, 750, 1042, 1423
BmgBI CACGTC 1 cut(s) 555
BmgT120I GGNCC 6 cut(s) 179, 750, 1042, 1259, 1412, 1423
BmiI GGNNCC 8 cut(s) 147, 180, 181, 751, 1043, 1413, 1425, 1582
BmrI ACTGGG 1 cut(s) 756
BmsI GCATC 8 cut(s) 31, 232, 471, 734, 848, 895, 1373, 1724
BmuI ACTGGG 1 cut(s) 756
BoxI GACNNNNGTC 1 cut(s) 1047
BpiI GAAGAC 3 cut(s) 102, 117, 422
BpuEI CTTGAG 1 cut(s) 626
BsaAI YACGTR 1 cut(s) 1556
BsaBI GATNNNNATC 3 cut(s) 36, 769, 1639
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 1 cut(s) 1847
BsaJI CCNNGG 2 cut(s) 1090, 1441
BsaWI WCCGGW 1 cut(s) 320
Bsc4I CCNNNNNNNGG 3 cut(s) 881, 1278, 1833
Bse118I RCCGGY 1 cut(s) 1153
Bse1I ACTGG 2 cut(s) 751, 1345
Bse21I CCTNAGG 1 cut(s) 1255
Bse3DI GCAATG 1 cut(s) 520
Bse8I GATNNNNATC 3 cut(s) 36, 769, 1639
BseDI CCNNGG 2 cut(s) 1090, 1441
BseGI GGATG 5 cut(s) 58, 74, 1640, 1816, 1823
BseJI GATNNNNATC 3 cut(s) 36, 769, 1639
BseLI CCNNNNNNNGG 3 cut(s) 881, 1278, 1833
BseMI GCAATG 1 cut(s) 520
BseMII CTCAG 7 cut(s) 78, 114, 239, 347, 1126, 1269, 1861
BseNI ACTGG 2 cut(s) 751, 1345
BseRI GAGGAG 2 cut(s) 298, 1835
BseXI GCAGC 8 cut(s) 254, 861, 1144, 1147, 1390, 1620, 1623, 1857
BseYI CCCAGC 1 cut(s) 944
Bsh1236I CGCG 1 cut(s) 934
BshFI GGCC 5 cut(s) 194, 369, 480, 1261, 1414
BsiHKAI GWGCWC 2 cut(s) 332, 889
BsiSI CCGG 3 cut(s) 321, 1154, 1644
BslFI GGGAC 5 cut(s) 192, 690, 763, 1055, 1409
BslI CCNNNNNNNGG 3 cut(s) 881, 1278, 1833
BsmAI GTCTC 2 cut(s) 1388, 1847
BsmFI GGGAC 5 cut(s) 192, 690, 763, 1055, 1409
BsmI GAATGC 1 cut(s) 1309
BsnI GGCC 5 cut(s) 194, 369, 480, 1261, 1414
Bso31I GGTCTC 1 cut(s) 1847
Bsp1286I GDGCHC 2 cut(s) 332, 889
Bsp143I GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
Bsp68I TCGCGA 1 cut(s) 934
BspACI CCGC 9 cut(s) 237, 252, 255, 258, 261, 264, 280, 308, 1362
BspANI GGCC 5 cut(s) 194, 369, 480, 1261, 1414
BspCNI CTCAG 7 cut(s) 77, 113, 240, 346, 1125, 1268, 1860
BspFNI CGCG 1 cut(s) 934
BspHI TCATGA 2 cut(s) 187, 1895
BspLI GGNNCC 8 cut(s) 147, 180, 181, 751, 1043, 1413, 1425, 1582
BspPI GGATC 5 cut(s) 140, 153, 739, 1188, 1642
BspQI GCTCTTC 2 cut(s) 1338, 1746
BspTI CTTAAG 1 cut(s) 1831
BspTNI GGTCTC 1 cut(s) 1847
BsrBI CCGCTC 1 cut(s) 252
BsrDI GCAATG 1 cut(s) 520
BsrFI RCCGGY 1 cut(s) 1153
BsrI ACTGG 2 cut(s) 751, 1345
BssAI RCCGGY 1 cut(s) 1153
BssECI CCNNGG 2 cut(s) 1090, 1441
BssMI GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
BssNI GRCGYC 1 cut(s) 135
BssSI CACGAG 1 cut(s) 558
BssT1I CCWWGG 2 cut(s) 1090, 1441
Bst2BI CACGAG 1 cut(s) 558
Bst4CI ACNGT 5 cut(s) 410, 1306, 1354, 1576, 1774
Bst6I CTCTTC 4 cut(s) 42, 1338, 1746, 1883
BstACI GRCGYC 1 cut(s) 135
BstAFI CTTAAG 1 cut(s) 1831
BstAPI GCANNNNNTGC 1 cut(s) 1082
BstBAI YACGTR 1 cut(s) 1556
BstC8I GCNNGC 6 cut(s) 241, 278, 639, 942, 1087, 1606
BstDEI CTNAG 8 cut(s) 64, 100, 248, 333, 787, 1112, 1255, 1847
BstENI CCTNNNNNAGG 1 cut(s) 1831
BstF5I GGATG 5 cut(s) 58, 74, 1640, 1816, 1823
BstFNI CGCG 1 cut(s) 934
BstH2I RGCGCY 1 cut(s) 1783
BstHHI GCGC 2 cut(s) 1248, 1782
BstKTI GATC 6 cut(s) 40, 148, 415, 734, 1183, 1637
BstMAI GTCTC 2 cut(s) 1388, 1847
BstMBI GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
BstNSI RCATGY 4 cut(s) 686, 944, 1173, 1246
BstPAI GACNNNNGTC 1 cut(s) 1047
BstSFI CTRYAG 2 cut(s) 41, 876
BstUI CGCG 1 cut(s) 934
BstV1I GCAGC 8 cut(s) 254, 861, 1144, 1147, 1390, 1620, 1623, 1857
BstV2I GAAGAC 3 cut(s) 102, 117, 422
BstX2I RGATCY 4 cut(s) 37, 145, 1180, 1634
BstYI RGATCY 4 cut(s) 37, 145, 1180, 1634
Bsu36I CCTNAGG 1 cut(s) 1255
BsuRI GGCC 5 cut(s) 194, 369, 480, 1261, 1414
BtrI CACGTC 1 cut(s) 555
BtsCI GGATG 5 cut(s) 58, 74, 1640, 1816, 1823
BtsIMutI CAGTG 3 cut(s) 350, 1338, 1359
BtuMI TCGCGA 1 cut(s) 934
Cac8I GCNNGC 6 cut(s) 241, 278, 639, 942, 1087, 1606
CaiI CAGNNNCTG 1 cut(s) 1262
CciI TCATGA 2 cut(s) 187, 1895
CfoI GCGC 2 cut(s) 1248, 1782
Cfr10I RCCGGY 1 cut(s) 1153
Cfr13I GGNCC 6 cut(s) 179, 750, 1042, 1259, 1412, 1423
CseI GACGC 2 cut(s) 143, 897
Csp6I GTAC 5 cut(s) 686, 1116, 1151, 1819, 1884
CviAII CATG 8 cut(s) 188, 683, 941, 1170, 1176, 1243, 1586, 1896
CviQI GTAC 5 cut(s) 686, 1116, 1151, 1819, 1884
DdeI CTNAG 8 cut(s) 64, 100, 248, 333, 787, 1112, 1255, 1847
DpnI GATC 6 cut(s) 39, 147, 414, 733, 1182, 1636
DpnII GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
DraI TTTAAA 2 cut(s) 1029, 1596
DraIII CACNNNGTG 1 cut(s) 19
Eam1104I CTCTTC 4 cut(s) 42, 1338, 1746, 1883
EarI CTCTTC 4 cut(s) 42, 1338, 1746, 1883
Ecl136II GAGCTC 1 cut(s) 330
Eco130I CCWWGG 2 cut(s) 1090, 1441
Eco24I GRGCYC 1 cut(s) 332
Eco31I GGTCTC 1 cut(s) 1847
Eco32I GATATC 1 cut(s) 1660
Eco47I GGWCC 4 cut(s) 179, 750, 1042, 1423
Eco53kI GAGCTC 1 cut(s) 330
Eco57I CTGAAG 3 cut(s) 1295, 1740, 1864
Eco72I CACGTG 1 cut(s) 1556
Eco81I CCTNAGG 1 cut(s) 1255
EcoICRI GAGCTC 1 cut(s) 330
EcoNI CCTNNNNNAGG 1 cut(s) 1831
EcoO109I RGGNCCY 4 cut(s) 179, 750, 1042, 1259
EcoRV GATATC 1 cut(s) 1660
EcoT14I CCWWGG 2 cut(s) 1090, 1441
EcoT38I GRGCYC 1 cut(s) 332
ErhI CCWWGG 2 cut(s) 1090, 1441
FaeI CATG 8 cut(s) 191, 686, 944, 1173, 1179, 1246, 1589, 1899
FalI AAGNNNNNCTT 2 cut(s) 951, 983
FaqI GGGAC 5 cut(s) 192, 690, 763, 1055, 1409
FatI CATG 8 cut(s) 187, 682, 940, 1169, 1175, 1242, 1585, 1895
FauNDI CATATG 1 cut(s) 994
FbaI TGATCA 1 cut(s) 412
FokI GGATG 5 cut(s) 61, 65, 1627, 1810, 1823
FriOI GRGCYC 1 cut(s) 332
FspBI CTAG 6 cut(s) 476, 689, 1020, 1091, 1473, 1742
GlaI GCGC 2 cut(s) 1247, 1781
GsaI CCCAGC 1 cut(s) 948
HaeII RGCGCY 1 cut(s) 1783
HaeIII GGCC 5 cut(s) 194, 369, 480, 1261, 1414
HapII CCGG 3 cut(s) 321, 1154, 1644
HgaI GACGC 2 cut(s) 143, 897
HhaI GCGC 2 cut(s) 1248, 1782
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 8 cut(s) 191, 686, 944, 1173, 1179, 1246, 1589, 1899
Hin6I GCGC 2 cut(s) 1246, 1780
HinP1I GCGC 2 cut(s) 1246, 1780
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HindIII AAGCTT 1 cut(s) 1889
HinfI GANTC 9 cut(s) 98, 206, 288, 349, 581, 595, 765, 1190, 1268
HpaII CCGG 3 cut(s) 321, 1154, 1644
HphI GGTGA 1 cut(s) 422
Hpy166II GTNNAC 5 cut(s) 440, 574, 602, 833, 1821
Hpy8I GTNNAC 5 cut(s) 440, 574, 602, 833, 1821
Hpy99I CGWCG 2 cut(s) 92, 275
HpyAV CCTTC 9 cut(s) 288, 625, 789, 859, 930, 1068, 1270, 1560, 1837
HpyCH4III ACNGT 5 cut(s) 410, 1306, 1354, 1576, 1774
HpyCH4IV ACGT 7 cut(s) 90, 554, 900, 1048, 1149, 1555, 1650
HpyF3I CTNAG 8 cut(s) 64, 100, 248, 333, 787, 1112, 1255, 1847
HpySE526I ACGT 7 cut(s) 90, 554, 900, 1048, 1149, 1555, 1650
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 8 cut(s) 191, 686, 944, 1173, 1179, 1246, 1589, 1899
HspAI GCGC 2 cut(s) 1246, 1780
KflI GGGWCCC 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
LguI GCTCTTC 2 cut(s) 1338, 1746
LmnI GCTCC 1 cut(s) 634
Lsp1109I GCAGC 8 cut(s) 254, 861, 1144, 1147, 1390, 1620, 1623, 1857
LweI GCATC 8 cut(s) 31, 232, 471, 734, 848, 895, 1373, 1724
MaeI CTAG 6 cut(s) 476, 689, 1020, 1091, 1473, 1742
MaeII ACGT 7 cut(s) 90, 554, 900, 1048, 1149, 1555, 1650
MaeIII GTNAC 3 cut(s) 555, 870, 1862
MalI GATC 6 cut(s) 39, 147, 414, 733, 1182, 1636
MbiI CCGCTC 1 cut(s) 252
MboI GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
MfeI CAATTG 1 cut(s) 1371
MflI RGATCY 4 cut(s) 37, 145, 1180, 1634
MhlI GDGCHC 2 cut(s) 332, 889
MlyI GAGTC 2 cut(s) 92, 200
MroXI GAANNNNTTC 1 cut(s) 548
MseI TTAA 5 cut(s) 926, 1028, 1595, 1785, 1832
MslI CAYNNNNRTG 1 cut(s) 1174
MspCI CTTAAG 1 cut(s) 1831
MspI CCGG 3 cut(s) 321, 1154, 1644
MunI CAATTG 1 cut(s) 1371
Mva1269I GAATGC 1 cut(s) 1309
MvnI CGCG 1 cut(s) 934
NdeI CATATG 1 cut(s) 994
NdeII GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
NlaIII CATG 8 cut(s) 191, 686, 944, 1173, 1179, 1246, 1589, 1899
NlaIV GGNNCC 8 cut(s) 147, 180, 181, 751, 1043, 1413, 1425, 1582
NmuCI GTSAC 1 cut(s) 555
NruI TCGCGA 1 cut(s) 934
NspI RCATGY 4 cut(s) 686, 944, 1173, 1246
PaeI GCATGC 1 cut(s) 944
PagI TCATGA 2 cut(s) 187, 1895
PciSI GCTCTTC 2 cut(s) 1338, 1746
PctI GAATGC 1 cut(s) 1309
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 7 cut(s) 288, 349, 581, 595, 765, 1190, 1268
PleI GAGTC 2 cut(s) 92, 200
PmaCI CACGTG 1 cut(s) 1556
PmlI CACGTG 1 cut(s) 1556
PpsI GAGTC 2 cut(s) 92, 200
Ppu21I YACGTR 1 cut(s) 1556
PpuMI RGGWCCY 3 cut(s) 179, 750, 1042
PshAI GACNNNNGTC 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 332
Psp5II RGGWCCY 3 cut(s) 179, 750, 1042
PspCI CACGTG 1 cut(s) 1556
PspFI CCCAGC 1 cut(s) 944
PspN4I GGNNCC 8 cut(s) 147, 180, 181, 751, 1043, 1413, 1425, 1582
PspPI GGNCC 6 cut(s) 179, 750, 1042, 1259, 1412, 1423
PspPPI RGGWCCY 3 cut(s) 179, 750, 1042
PstNI CAGNNNCTG 1 cut(s) 1262
PsuI RGATCY 4 cut(s) 37, 145, 1180, 1634
RruI TCGCGA 1 cut(s) 934
RsaI GTAC 5 cut(s) 687, 1117, 1152, 1820, 1885
RsaNI GTAC 5 cut(s) 686, 1116, 1151, 1819, 1884
RseI CAYNNNNRTG 1 cut(s) 1174
SacI GAGCTC 1 cut(s) 332
SapI GCTCTTC 2 cut(s) 1338, 1746
SaqAI TTAA 5 cut(s) 926, 1028, 1595, 1785, 1832
Sau3AI GATC 6 cut(s) 37, 145, 412, 731, 1180, 1634
Sau96I GGNCC 6 cut(s) 179, 750, 1042, 1259, 1412, 1423
SchI GAGTC 2 cut(s) 92, 200
SduI GDGCHC 2 cut(s) 332, 889
SfaNI GCATC 8 cut(s) 31, 232, 471, 734, 848, 895, 1373, 1724
SfcI CTRYAG 2 cut(s) 41, 876
SinI GGWCC 4 cut(s) 179, 750, 1042, 1423
SmiMI CAYNNNNRTG 1 cut(s) 1174
SmlI CTYRAG 2 cut(s) 605, 1831
SmoI CTYRAG 2 cut(s) 605, 1831
SpeI ACTAGT 1 cut(s) 1741
SphI GCATGC 1 cut(s) 944
SsiI CCGC 9 cut(s) 237, 252, 255, 258, 261, 264, 280, 308, 1362
SspMI CTAG 6 cut(s) 476, 689, 1020, 1091, 1473, 1742
SstI GAGCTC 1 cut(s) 332
StyI CCWWGG 2 cut(s) 1090, 1441
TaaI ACNGT 5 cut(s) 410, 1306, 1354, 1576, 1774
TaiI ACGT 7 cut(s) 93, 557, 903, 1051, 1152, 1558, 1653
TaqI TCGA 3 cut(s) 465, 703, 1512
TatI WGTACW 2 cut(s) 685, 1818
TauI GCSGC 6 cut(s) 255, 258, 261, 264, 267, 311
TfiI GAWTC 7 cut(s) 288, 349, 581, 595, 765, 1190, 1268
Tru1I TTAA 5 cut(s) 926, 1028, 1595, 1785, 1832
Tru9I TTAA 5 cut(s) 926, 1028, 1595, 1785, 1832
TscAI CASTG 3 cut(s) 350, 1345, 1359
TseFI GTSAC 1 cut(s) 555
TseI GCWGC 8 cut(s) 267, 849, 1157, 1160, 1403, 1608, 1611, 1870
Tsp45I GTSAC 1 cut(s) 555
TspDTI ATGAA 5 cut(s) 69, 1289, 1308, 1629, 1884
TspGWI ACGGA 3 cut(s) 67, 158, 1133
TspRI CASTG 3 cut(s) 350, 1345, 1359
Vha464I CTTAAG 1 cut(s) 1831
VpaK11BI GGWCC 4 cut(s) 179, 750, 1042, 1423
XagI CCTNNNNNAGG 1 cut(s) 1831
XapI RAATTY 4 cut(s) 699, 918, 1030, 1390
XceI RCATGY 4 cut(s) 686, 944, 1173, 1246
XmaJI CCTAGG 1 cut(s) 1090
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 6 cut(s) 476, 689, 1020, 1091, 1473, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.