Topless-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27030 AT5G27030 |
| fragaria_vesca | FvH4_6g07000 FvH4_6g07000 |
| malus_domestica | MD04G1197000.v1.1 MD12G1209900.v1.1 |
| prunus_persica | Prupe.6G317500_v2.0.a1 Prupe.6G317500_v2.0.a1 Prupe.6G317500_v2.0.a1 |
| pyrus_communis | pycom04g17420 pycom12g19730 |
| rosa_chinensis | RchiOBHm_Chr3g0456531 |
| rosa_laevigata | RLG00000025297 |
| rosa_multiflora | Rmu_sc0002607.1_g000006 Rmu_sc0017908.1_g000014 Rmu_sc0023184.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00422660 |
| rosa_rugosa | Rorug03G0013400 Rorug03G0013500 Rorug03G0013600 Rorug03G0013700 Rorug03G0013800 |
| rosa_samantha | Rh3AG074300 Rh3BG076000 Rh3CG075700 Rh3DG077800 |
| rosa_wichuraiana | Rw3G006360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 531 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 500 |
| Acc65I | GGTACC | 1 cut(s) | 1076 |
| AccB1I | GGYRCC | 1 cut(s) | 1076 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2271 |
| AccI | GTMKAC | 1 cut(s) | 2634 |
| AccII | CGCG | 1 cut(s) | 182 |
| AccIII | TCCGGA | 1 cut(s) | 1594 |
| AcoI | YGGCCR | 2 cut(s) | 2929, 3124 |
| AcsI | RAATTY | 5 cut(s) | 884, 1086, 1312, 1701, 2445 |
| AcuI | CTGAAG | 2 cut(s) | 1749, 3420 |
| AcyI | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| AfeI | AGCGCT | 1 cut(s) | 2559 |
| AflIII | ACRYGT | 3 cut(s) | 1054, 1372, 1454 |
| AjiI | CACGTC | 2 cut(s) | 2969, 3047 |
| AjnI | CCWGG | 5 cut(s) | 937, 1109, 1517, 1561, 1842 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 906, 933, 938, 965 |
| Alw21I | GWGCWC | 3 cut(s) | 651, 1226, 3237 |
| Alw26I | GTCTC | 7 cut(s) | 41, 1632, 2524, 2946, 3018, 3066, 3262 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2416 |
| Ama87I | CYCGRG | 1 cut(s) | 2393 |
| Aor13HI | TCCGGA | 1 cut(s) | 1594 |
| Aor51HI | AGCGCT | 1 cut(s) | 2559 |
| AoxI | GGCC | 9 cut(s) | 5, 486, 933, 2064, 2426, 2454, 2929, 3124, 3305 |
| ApeKI | GCWGC | 6 cut(s) | 63, 754, 964, 2476, 2619, 3279 |
| ApoI | RAATTY | 5 cut(s) | 884, 1086, 1312, 1701, 2445 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1403, 1435 |
| AseI | ATTAAT | 1 cut(s) | 735 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 948, 1705 |
| Asp718I | GGTACC | 1 cut(s) | 1076 |
| AspA2I | CCTAGG | 2 cut(s) | 1210, 3290 |
| AspLEI | GCGC | 3 cut(s) | 33, 2462, 2560 |
| AsuC2I | CCSGG | 1 cut(s) | 776 |
| AsuHPI | GGTGA | 6 cut(s) | 136, 247, 1187, 1859, 2494, 3251 |
| AvaI | CYCGRG | 1 cut(s) | 2393 |
| AvaII | GGWCC | 7 cut(s) | 772, 839, 1538, 1810, 2498, 2977, 3091 |
| AvrII | CCTAGG | 2 cut(s) | 1210, 3290 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2593, 2616, 2626, 2649 |
| BamHI | GGATCC | 1 cut(s) | 2293 |
| BanI | GGYRCC | 1 cut(s) | 1076 |
| BanII | GRGCYC | 2 cut(s) | 651, 2090 |
| BauI | CACGAG | 1 cut(s) | 3321 |
| BbsI | GAAGAC | 3 cut(s) | 1245, 1889, 2971 |
| Bbv12I | GWGCWC | 3 cut(s) | 651, 1226, 3237 |
| BbvI | GCAGC | 6 cut(s) | 50, 766, 976, 2488, 2631, 3291 |
| BceAI | ACGGC | 4 cut(s) | 18, 625, 1245, 3111 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1030, 1040, 1064, 1074, 3224, 3258 |
| BciT130I | CCWGG | 5 cut(s) | 939, 1111, 1519, 1563, 1844 |
| BciVI | GTATCC | 1 cut(s) | 178 |
| BclI | TGATCA | 1 cut(s) | 2878 |
| BcnI | CCSGG | 1 cut(s) | 776 |
| BcoDI | GTCTC | 7 cut(s) | 41, 1632, 2524, 2946, 3018, 3066, 3262 |
| BfmI | CTRYAG | 1 cut(s) | 1164 |
| BfoI | RGCGCY | 2 cut(s) | 2463, 2561 |
| BfuI | GTATCC | 1 cut(s) | 178 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2387 |
| BglII | AGATCT | 1 cut(s) | 1544 |
| BisI | GCNGC | 9 cut(s) | 5, 55, 64, 156, 755, 965, 2477, 2620, 3280 |
| BlnI | CCTAGG | 2 cut(s) | 1210, 3290 |
| BlsI | GCNGC | 9 cut(s) | 6, 56, 65, 157, 756, 966, 2478, 2621, 3281 |
| BmcAI | AGTACT | 2 cut(s) | 329, 1012 |
| Bme1390I | CCNGG | 6 cut(s) | 776, 939, 1111, 1519, 1563, 1844 |
| Bme18I | GGWCC | 7 cut(s) | 772, 839, 1538, 1810, 2498, 2977, 3091 |
| BmeT110I | CYCGRG | 1 cut(s) | 2393 |
| BmgBI | CACGTC | 2 cut(s) | 2969, 3047 |
| BmrFI | CCNGG | 6 cut(s) | 776, 939, 1111, 1519, 1563, 1844 |
| BmsI | GCATC | 4 cut(s) | 1546, 2039, 3291, 3428 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2496 |
| BpiI | GAAGAC | 3 cut(s) | 1245, 1889, 2971 |
| BpmI | CTGGAG | 6 cut(s) | 77, 103, 229, 372, 497, 960 |
| BpuEI | CTTGAG | 2 cut(s) | 314, 1894 |
| BpuMI | CCSGG | 1 cut(s) | 776 |
| Bsa29I | ATCGAT | 1 cut(s) | 409 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1185, 3135, 3183 |
| BsaHI | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| BsaJI | CCNNGG | 9 cut(s) | 264, 937, 1210, 1842, 1843, 2270, 2926, 3290, 3332 |
| BsaWI | WCCGGW | 2 cut(s) | 1032, 1594 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 101, 131, 906, 933, 936, 963, 3205, 3235 |
| Bse118I | RCCGGY | 1 cut(s) | 1356 |
| Bse1I | ACTGG | 7 cut(s) | 355, 755, 841, 1018, 1574, 2463, 2638 |
| Bse3DI | GCAATG | 3 cut(s) | 770, 1580, 2763 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1185, 3135, 3183 |
| BseAI | TCCGGA | 1 cut(s) | 1594 |
| BseBI | CCWGG | 5 cut(s) | 939, 1111, 1519, 1563, 1844 |
| BseCI | ATCGAT | 1 cut(s) | 409 |
| BseDI | CCNNGG | 9 cut(s) | 264, 937, 1210, 1842, 1843, 2270, 2926, 3290, 3332 |
| BseJI | GATNNNNATC | 3 cut(s) | 1185, 3135, 3183 |
| BseMI | GCAATG | 3 cut(s) | 770, 1580, 2763 |
| BseMII | CTCAG | 6 cut(s) | 180, 617, 1949, 2535, 3095, 3381 |
| BseNI | ACTGG | 7 cut(s) | 355, 755, 841, 1018, 1574, 2463, 2638 |
| BseXI | GCAGC | 6 cut(s) | 50, 766, 976, 2488, 2631, 3291 |
| Bsh1236I | CGCG | 1 cut(s) | 182 |
| Bsh1285I | CGRYCG | 2 cut(s) | 469, 1064 |
| BshFI | GGCC | 9 cut(s) | 7, 488, 935, 2066, 2428, 2456, 2931, 3126, 3307 |
| BshNI | GGYRCC | 1 cut(s) | 1076 |
| BshVI | ATCGAT | 1 cut(s) | 409 |
| BsiEI | CGRYCG | 2 cut(s) | 469, 1064 |
| BsiHKAI | GWGCWC | 3 cut(s) | 651, 1226, 3237 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2393 |
| BsiSI | CCGG | 5 cut(s) | 24, 776, 1033, 1357, 1595 |
| BslFI | GGGAC | 4 cut(s) | 2504, 2990, 3098, 3104 |
| BsmAI | GTCTC | 7 cut(s) | 41, 1632, 2524, 2946, 3018, 3066, 3262 |
| BsmBI | CGTCTC | 1 cut(s) | 41 |
| BsmFI | GGGAC | 4 cut(s) | 2504, 2990, 3098, 3104 |
| BsnI | GGCC | 9 cut(s) | 7, 488, 935, 2066, 2428, 2456, 2931, 3126, 3307 |
| BsoBI | CYCGRG | 1 cut(s) | 2393 |
| Bsp1286I | GDGCHC | 4 cut(s) | 651, 1226, 2090, 3237 |
| Bsp13I | TCCGGA | 1 cut(s) | 1594 |
| Bsp1407I | TGTACA | 2 cut(s) | 2407, 2655 |
| BspANI | GGCC | 9 cut(s) | 7, 488, 935, 2066, 2428, 2456, 2931, 3126, 3307 |
| BspCNI | CTCAG | 6 cut(s) | 181, 616, 1950, 2534, 3096, 3382 |
| BspDI | ATCGAT | 1 cut(s) | 409 |
| BspEI | TCCGGA | 1 cut(s) | 1594 |
| BspFNI | CGCG | 1 cut(s) | 182 |
| BspHI | TCATGA | 1 cut(s) | 1929 |
| BspT107I | GGYRCC | 1 cut(s) | 1076 |
| BsrDI | GCAATG | 3 cut(s) | 770, 1580, 2763 |
| BsrFI | RCCGGY | 1 cut(s) | 1356 |
| BsrGI | TGTACA | 2 cut(s) | 2407, 2655 |
| BsrI | ACTGG | 7 cut(s) | 355, 755, 841, 1018, 1574, 2463, 2638 |
| BssAI | RCCGGY | 1 cut(s) | 1356 |
| BssECI | CCNNGG | 9 cut(s) | 264, 937, 1210, 1842, 1843, 2270, 2926, 3290, 3332 |
| BssNI | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| BssSI | CACGAG | 1 cut(s) | 3321 |
| BssT1I | CCWWGG | 3 cut(s) | 1210, 2270, 3290 |
| Bst2BI | CACGAG | 1 cut(s) | 3321 |
| Bst2UI | CCWGG | 5 cut(s) | 939, 1111, 1519, 1563, 1844 |
| Bst4CI | ACNGT | 7 cut(s) | 821, 1168, 1384, 1443, 2242, 2375, 2927 |
| Bst6I | CTCTTC | 3 cut(s) | 134, 2532, 2856 |
| BstACI | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| BstAUI | TGTACA | 2 cut(s) | 2407, 2655 |
| BstC8I | GCNNGC | 5 cut(s) | 29, 1151, 2156, 2458, 3277 |
| BstDEI | CTNAG | 8 cut(s) | 189, 499, 603, 1343, 1958, 2521, 3104, 3390 |
| BstDSI | CCRYGG | 1 cut(s) | 2926 |
| BstEII | GGTNACC | 1 cut(s) | 1601 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2537 |
| BstFNI | CGCG | 1 cut(s) | 182 |
| BstH2I | RGCGCY | 2 cut(s) | 2463, 2561 |
| BstHHI | GCGC | 3 cut(s) | 33, 2462, 2560 |
| BstMAI | GTCTC | 7 cut(s) | 41, 1632, 2524, 2946, 3018, 3066, 3262 |
| BstMCI | CGRYCG | 2 cut(s) | 469, 1064 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 60, 63, 655, 760, 2027, 2160, 2387, 3172, 3304 |
| BstNI | CCWGG | 5 cut(s) | 939, 1111, 1519, 1563, 1844 |
| BstNSI | RCATGY | 6 cut(s) | 31, 1058, 1153, 1376, 1458, 3275 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2496 |
| BstPI | GGTNACC | 1 cut(s) | 1601 |
| BstSCI | CCNGG | 6 cut(s) | 774, 937, 1109, 1517, 1561, 1842 |
| BstSFI | CTRYAG | 1 cut(s) | 1164 |
| BstUI | CGCG | 1 cut(s) | 182 |
| BstV1I | GCAGC | 6 cut(s) | 50, 766, 976, 2488, 2631, 3291 |
| BstV2I | GAAGAC | 3 cut(s) | 1245, 1889, 2971 |
| BstX2I | RGATCY | 5 cut(s) | 248, 1160, 1544, 2002, 2293 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1400 |
| BstYI | RGATCY | 5 cut(s) | 248, 1160, 1544, 2002, 2293 |
| Bsu15I | ATCGAT | 1 cut(s) | 409 |
| BsuI | GTATCC | 1 cut(s) | 178 |
| BsuRI | GGCC | 9 cut(s) | 7, 488, 935, 2066, 2428, 2456, 2931, 3126, 3307 |
| BsuTUI | ATCGAT | 1 cut(s) | 409 |
| BtgI | CCRYGG | 1 cut(s) | 2926 |
| BtrI | CACGTC | 2 cut(s) | 2969, 3047 |
| BtsI | GCAGTG | 1 cut(s) | 2016 |
| BtsIMutI | CAGTG | 4 cut(s) | 416, 2016, 2065, 2470 |
| Cac8I | GCNNGC | 5 cut(s) | 29, 1151, 2156, 2458, 3277 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2416 |
| CciI | TCATGA | 1 cut(s) | 1929 |
| CfoI | GCGC | 3 cut(s) | 33, 2462, 2560 |
| Cfr10I | RCCGGY | 1 cut(s) | 1356 |
| ClaI | ATCGAT | 1 cut(s) | 409 |
| CseI | GACGC | 6 cut(s) | 234, 1142, 1397, 1847, 1962, 2582 |
| DdeI | CTNAG | 8 cut(s) | 189, 499, 603, 1343, 1958, 2521, 3104, 3390 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 500 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 500 |
| EaeI | YGGCCR | 2 cut(s) | 2929, 3124 |
| Eam1104I | CTCTTC | 3 cut(s) | 134, 2532, 2856 |
| EarI | CTCTTC | 3 cut(s) | 134, 2532, 2856 |
| Ecl136II | GAGCTC | 1 cut(s) | 649 |
| Eco130I | CCWWGG | 3 cut(s) | 1210, 2270, 3290 |
| Eco24I | GRGCYC | 2 cut(s) | 651, 2090 |
| Eco47I | GGWCC | 7 cut(s) | 772, 839, 1538, 1810, 2498, 2977, 3091 |
| Eco47III | AGCGCT | 1 cut(s) | 2559 |
| Eco53kI | GAGCTC | 1 cut(s) | 649 |
| Eco57I | CTGAAG | 2 cut(s) | 1749, 3420 |
| Eco88I | CYCGRG | 1 cut(s) | 2393 |
| Eco91I | GGTNACC | 1 cut(s) | 1601 |
| EcoICRI | GAGCTC | 1 cut(s) | 649 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2537 |
| EcoO109I | RGGNCCY | 3 cut(s) | 772, 934, 1538 |
| EcoO65I | GGTNACC | 1 cut(s) | 1601 |
| EcoRII | CCWGG | 5 cut(s) | 937, 1109, 1517, 1561, 1842 |
| EcoT14I | CCWWGG | 3 cut(s) | 1210, 2270, 3290 |
| EcoT38I | GRGCYC | 2 cut(s) | 651, 2090 |
| ErhI | CCWWGG | 3 cut(s) | 1210, 2270, 3290 |
| Esp3I | CGTCTC | 1 cut(s) | 41 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1881, 1913 |
| FaqI | GGGAC | 4 cut(s) | 2504, 2990, 3098, 3104 |
| FauI | CCCGC | 1 cut(s) | 3284 |
| FauNDI | CATATG | 1 cut(s) | 2578 |
| FbaI | TGATCA | 1 cut(s) | 2878 |
| FblI | GTMKAC | 1 cut(s) | 2634 |
| Fnu4HI | GCNGC | 9 cut(s) | 5, 55, 64, 156, 755, 965, 2477, 2620, 3280 |
| FriOI | GRGCYC | 2 cut(s) | 651, 2090 |
| Fsp4HI | GCNGC | 9 cut(s) | 5, 55, 64, 156, 755, 965, 2477, 2620, 3280 |
| GlaI | GCGC | 3 cut(s) | 32, 2461, 2559 |
| GluI | GCNGC | 9 cut(s) | 5, 55, 64, 156, 755, 965, 2477, 2620, 3280 |
| GsuI | CTGGAG | 6 cut(s) | 77, 103, 229, 372, 497, 960 |
| HaeII | RGCGCY | 2 cut(s) | 2463, 2561 |
| HaeIII | GGCC | 9 cut(s) | 7, 488, 935, 2066, 2428, 2456, 2931, 3126, 3307 |
| HapII | CCGG | 5 cut(s) | 24, 776, 1033, 1357, 1595 |
| HgaI | GACGC | 6 cut(s) | 234, 1142, 1397, 1847, 1962, 2582 |
| HhaI | GCGC | 3 cut(s) | 33, 2462, 2560 |
| Hin1I | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| Hin6I | GCGC | 3 cut(s) | 31, 2460, 2558 |
| HinP1I | GCGC | 3 cut(s) | 31, 2460, 2558 |
| HincII | GTYRAC | 4 cut(s) | 1387, 2280, 2530, 2709 |
| HindII | GTYRAC | 4 cut(s) | 1387, 2280, 2530, 2709 |
| HindIII | AAGCTT | 1 cut(s) | 689 |
| HpaII | CCGG | 5 cut(s) | 24, 776, 1033, 1357, 1595 |
| HphI | GGTGA | 6 cut(s) | 136, 247, 1187, 1859, 2494, 3251 |
| Hpy99I | CGWCG | 1 cut(s) | 275 |
| HpyCH4III | ACNGT | 7 cut(s) | 821, 1168, 1384, 1443, 2242, 2375, 2927 |
| HpyCH4IV | ACGT | 4 cut(s) | 2698, 2968, 3040, 3046 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 60, 63, 655, 760, 2027, 2160, 2387, 3172, 3304 |
| HpyF3I | CTNAG | 8 cut(s) | 189, 499, 603, 1343, 1958, 2521, 3104, 3390 |
| HpySE526I | ACGT | 4 cut(s) | 2698, 2968, 3040, 3046 |
| Hsp92I | GRCGYC | 3 cut(s) | 1389, 1839, 1954 |
| HspAI | GCGC | 3 cut(s) | 31, 2460, 2558 |
| Kpn2I | TCCGGA | 1 cut(s) | 1594 |
| KpnI | GGTACC | 1 cut(s) | 1080 |
| Ksp22I | TGATCA | 1 cut(s) | 2878 |
| Lsp1109I | GCAGC | 6 cut(s) | 50, 766, 976, 2488, 2631, 3291 |
| LweI | GCATC | 4 cut(s) | 1546, 2039, 3291, 3428 |
| MaeII | ACGT | 4 cut(s) | 2698, 2968, 3040, 3046 |
| MaeIII | GTNAC | 7 cut(s) | 1168, 1264, 1601, 1906, 1988, 2369, 2969 |
| MfeI | CAATTG | 2 cut(s) | 879, 2805 |
| MflI | RGATCY | 5 cut(s) | 248, 1160, 1544, 2002, 2293 |
| MhlI | GDGCHC | 4 cut(s) | 651, 1226, 2090, 3237 |
| MlyI | GAGTC | 7 cut(s) | 721, 751, 1282, 1980, 2349, 2704, 2788 |
| MmeI | TCCRAC | 1 cut(s) | 2796 |
| MroI | TCCGGA | 1 cut(s) | 1594 |
| MroXI | GAANNNNTTC | 2 cut(s) | 948, 1705 |
| MseI | TTAA | 7 cut(s) | 176, 566, 735, 747, 1680, 2886, 3441 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1175, 1326, 1398, 1818, 2718, 2768 |
| MspA1I | CMGCKG | 2 cut(s) | 158, 2479 |
| MspI | CCGG | 5 cut(s) | 24, 776, 1033, 1357, 1595 |
| MspR9I | CCNGG | 6 cut(s) | 776, 939, 1111, 1519, 1563, 1844 |
| MunI | CAATTG | 2 cut(s) | 879, 2805 |
| MvaI | CCWGG | 5 cut(s) | 939, 1111, 1519, 1563, 1844 |
| MvnI | CGCG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 60, 63, 655, 760, 2027, 2160, 2387, 3172, 3304 |
| NciI | CCSGG | 1 cut(s) | 776 |
| NdeI | CATATG | 1 cut(s) | 2578 |
| NmeAIII | GCCGAG | 1 cut(s) | 3357 |
| NmuCI | GTSAC | 4 cut(s) | 1168, 1906, 1988, 2969 |
| NspI | RCATGY | 6 cut(s) | 31, 1058, 1153, 1376, 1458, 3275 |
| PaeI | GCATGC | 2 cut(s) | 31, 1153 |
| PagI | TCATGA | 1 cut(s) | 1929 |
| PasI | CCCWGGG | 1 cut(s) | 1843 |
| PciI | ACATGT | 3 cut(s) | 1054, 1372, 1454 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 276, 471 |
| PdmI | GAANNNNTTC | 2 cut(s) | 948, 1705 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2271 |
| PkrI | GCNGC | 9 cut(s) | 6, 56, 65, 157, 756, 966, 2478, 2621, 3281 |
| Ple19I | CGATCG | 2 cut(s) | 469, 1064 |
| PleI | GAGTC | 7 cut(s) | 721, 750, 1281, 1979, 2349, 2704, 2788 |
| PpsI | GAGTC | 7 cut(s) | 721, 750, 1281, 1979, 2349, 2704, 2788 |
| PpuMI | RGGWCCY | 2 cut(s) | 772, 1538 |
| PscI | ACATGT | 3 cut(s) | 1054, 1372, 1454 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2496 |
| PshBI | ATTAAT | 1 cut(s) | 735 |
| PsiI | TTATAA | 1 cut(s) | 531 |
| Psp124BI | GAGCTC | 1 cut(s) | 651 |
| Psp5II | RGGWCCY | 2 cut(s) | 772, 1538 |
| Psp6I | CCWGG | 5 cut(s) | 937, 1109, 1517, 1561, 1842 |
| PspEI | GGTNACC | 1 cut(s) | 1601 |
| PspGI | CCWGG | 5 cut(s) | 937, 1109, 1517, 1561, 1842 |
| PspPPI | RGGWCCY | 2 cut(s) | 772, 1538 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2416 |
| PsuI | RGATCY | 5 cut(s) | 248, 1160, 1544, 2002, 2293 |
| PvuI | CGATCG | 2 cut(s) | 469, 1064 |
| PvuII | CAGCTG | 1 cut(s) | 2479 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1175, 1326, 1398, 1818, 2718, 2768 |
| SacI | GAGCTC | 1 cut(s) | 651 |
| SaqAI | TTAA | 7 cut(s) | 176, 566, 735, 747, 1680, 2886, 3441 |
| SatI | GCNGC | 9 cut(s) | 5, 55, 64, 156, 755, 965, 2477, 2620, 3280 |
| ScaI | AGTACT | 2 cut(s) | 329, 1012 |
| SchI | GAGTC | 7 cut(s) | 721, 751, 1282, 1980, 2349, 2704, 2788 |
| ScrFI | CCNGG | 6 cut(s) | 776, 939, 1111, 1519, 1563, 1844 |
| SduI | GDGCHC | 4 cut(s) | 651, 1226, 2090, 3237 |
| SfaNI | GCATC | 4 cut(s) | 1546, 2039, 3291, 3428 |
| SfcI | CTRYAG | 1 cut(s) | 1164 |
| SinI | GGWCC | 7 cut(s) | 772, 839, 1538, 1810, 2498, 2977, 3091 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1175, 1326, 1398, 1818, 2718, 2768 |
| SmlI | CTYRAG | 2 cut(s) | 293, 1873 |
| SmoI | CTYRAG | 2 cut(s) | 293, 1873 |
| SphI | GCATGC | 2 cut(s) | 31, 1153 |
| SstI | GAGCTC | 1 cut(s) | 651 |
| StyD4I | CCNGG | 6 cut(s) | 774, 937, 1109, 1517, 1561, 1842 |
| StyI | CCWWGG | 3 cut(s) | 1210, 2270, 3290 |
| TaaI | ACNGT | 7 cut(s) | 821, 1168, 1384, 1443, 2242, 2375, 2927 |
| TaiI | ACGT | 4 cut(s) | 2701, 2971, 3043, 3049 |
| TaqII | GACCGA | 2 cut(s) | 2994, 3108 |
| TatI | WGTACW | 7 cut(s) | 171, 327, 1010, 1479, 1574, 2407, 2655 |
| TauI | GCSGC | 3 cut(s) | 7, 57, 158 |
| Tru1I | TTAA | 7 cut(s) | 176, 566, 735, 747, 1680, 2886, 3441 |
| Tru9I | TTAA | 7 cut(s) | 176, 566, 735, 747, 1680, 2886, 3441 |
| TscAI | CASTG | 4 cut(s) | 423, 2023, 2065, 2470 |
| TseFI | GTSAC | 4 cut(s) | 1168, 1906, 1988, 2969 |
| TseI | GCWGC | 6 cut(s) | 63, 754, 964, 2476, 2619, 3279 |
| Tsp45I | GTSAC | 4 cut(s) | 1168, 1906, 1988, 2969 |
| TspGWI | ACGGA | 3 cut(s) | 915, 1850, 2248 |
| TspRI | CASTG | 4 cut(s) | 423, 2023, 2065, 2470 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2271 |
| VpaK11BI | GGWCC | 7 cut(s) | 772, 839, 1538, 1810, 2498, 2977, 3091 |
| VspI | ATTAAT | 1 cut(s) | 735 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2537 |
| XapI | RAATTY | 5 cut(s) | 884, 1086, 1312, 1701, 2445 |
| XbaI | TCTAGA | 1 cut(s) | 1091 |
| XceI | RCATGY | 6 cut(s) | 31, 1058, 1153, 1376, 1458, 3275 |
| XmaJI | CCTAGG | 2 cut(s) | 1210, 3290 |
| XmiI | GTMKAC | 1 cut(s) | 2634 |
| XmnI | GAANNNNTTC | 2 cut(s) | 948, 1705 |
| ZrmI | AGTACT | 2 cut(s) | 329, 1012 |