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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g16175 |
| rosa_multiflora | Rmu_sc0000633.1_g000011 Rmu_sc0001320.1_g000013 Rmu_sc0002244.1_g000023 Rmu_sc0002662.1_g000007 Rmu_sc0003152.1_g000001 Rmu_sc0004596.1_g000037 |
| rosa_roxburghii | Rroxscaffold_2G00105670 Rroxscaffold_5G00368480 |
| rosa_samantha | Rh2DG504200 Rh3CG072100 Rh5CG263500 Rh5CG466600 Rh5DG558700 Rh6CG061600 Rh7BG187700 |
| rosa_wichuraiana | Rw7G035340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 33 |
| AclWI | GGATC | 1 cut(s) | 98 |
| AcuI | CTGAAG | 1 cut(s) | 249 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 278 |
| AgsI | TTSAA | 3 cut(s) | 52, 167, 209 |
| AjnI | CCWGG | 1 cut(s) | 250 |
| AluBI | AGCT | 1 cut(s) | 355 |
| AluI | AGCT | 1 cut(s) | 355 |
| AlwI | GGATC | 1 cut(s) | 98 |
| BciT130I | CCWGG | 1 cut(s) | 252 |
| Bme1390I | CCNGG | 1 cut(s) | 252 |
| BmiI | GGNNCC | 1 cut(s) | 249 |
| BmrFI | CCNGG | 1 cut(s) | 252 |
| BmsI | GCATC | 2 cut(s) | 187, 208 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 278 |
| BseBI | CCWGG | 1 cut(s) | 252 |
| BseGI | GGATG | 2 cut(s) | 142, 202 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 278 |
| BseRI | GAGGAG | 1 cut(s) | 308 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 278 |
| Bsp143I | GATC | 2 cut(s) | 87, 103 |
| BspLI | GGNNCC | 1 cut(s) | 249 |
| BspPI | GGATC | 1 cut(s) | 98 |
| BspQI | GCTCTTC | 1 cut(s) | 261 |
| BssMI | GATC | 2 cut(s) | 87, 103 |
| Bst2UI | CCWGG | 1 cut(s) | 252 |
| Bst4CI | ACNGT | 1 cut(s) | 349 |
| Bst6I | CTCTTC | 1 cut(s) | 261 |
| BstF5I | GGATG | 2 cut(s) | 142, 202 |
| BstKTI | GATC | 2 cut(s) | 90, 106 |
| BstMBI | GATC | 2 cut(s) | 87, 103 |
| BstNI | CCWGG | 1 cut(s) | 252 |
| BstSCI | CCNGG | 1 cut(s) | 250 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| BtsCI | GGATG | 2 cut(s) | 142, 202 |
| BtsIMutI | CAGTG | 1 cut(s) | 354 |
| CviAII | CATG | 3 cut(s) | 126, 131, 379 |
| CviJI | RGCY | 3 cut(s) | 271, 321, 355 |
| CviKI_1 | RGCY | 3 cut(s) | 271, 321, 355 |
| DpnI | GATC | 2 cut(s) | 89, 105 |
| DpnII | GATC | 2 cut(s) | 87, 103 |
| Eam1104I | CTCTTC | 1 cut(s) | 261 |
| EarI | CTCTTC | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 1 cut(s) | 249 |
| EcoRII | CCWGG | 1 cut(s) | 250 |
| EcoT22I | ATGCAT | 1 cut(s) | 223 |
| FaeI | CATG | 3 cut(s) | 129, 134, 382 |
| FatI | CATG | 3 cut(s) | 125, 130, 378 |
| FokI | GGATG | 2 cut(s) | 149, 209 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| Hin1II | CATG | 3 cut(s) | 129, 134, 382 |
| HinfI | GANTC | 2 cut(s) | 7, 19 |
| Hpy166II | GTNNAC | 1 cut(s) | 123 |
| Hpy188I | TCNGA | 1 cut(s) | 229 |
| Hpy188III | TCNNGA | 1 cut(s) | 194 |
| Hpy8I | GTNNAC | 1 cut(s) | 123 |
| HpyCH4III | ACNGT | 1 cut(s) | 349 |
| HpyCH4IV | ACGT | 2 cut(s) | 283, 304 |
| HpyCH4V | TGCA | 2 cut(s) | 200, 221 |
| HpySE526I | ACGT | 2 cut(s) | 283, 304 |
| Hsp92II | CATG | 3 cut(s) | 129, 134, 382 |
| Kzo9I | GATC | 2 cut(s) | 87, 103 |
| LguI | GCTCTTC | 1 cut(s) | 261 |
| LmnI | GCTCC | 1 cut(s) | 352 |
| LpnPI | CCDG | 7 cut(s) | 98, 165, 179, 186, 237, 264, 285 |
| LweI | GCATC | 2 cut(s) | 187, 208 |
| MaeII | ACGT | 2 cut(s) | 283, 304 |
| MalI | GATC | 2 cut(s) | 89, 105 |
| MboI | GATC | 2 cut(s) | 87, 103 |
| MboII | GAAGA | 3 cut(s) | 221, 242, 278 |
| MfeI | CAATTG | 1 cut(s) | 37 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MluCI | AATT | 1 cut(s) | 37 |
| MnlI | CCTC | 5 cut(s) | 117, 127, 286, 289, 363 |
| Mph1103I | ATGCAT | 1 cut(s) | 223 |
| MseI | TTAA | 1 cut(s) | 66 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MspR9I | CCNGG | 1 cut(s) | 252 |
| MunI | CAATTG | 1 cut(s) | 37 |
| MvaI | CCWGG | 1 cut(s) | 252 |
| NdeII | GATC | 2 cut(s) | 87, 103 |
| NlaIII | CATG | 3 cut(s) | 129, 134, 382 |
| NlaIV | GGNNCC | 1 cut(s) | 249 |
| NsiI | ATGCAT | 1 cut(s) | 223 |
| PciSI | GCTCTTC | 1 cut(s) | 261 |
| PfeI | GAWTC | 2 cut(s) | 7, 19 |
| PsiI | TTATAA | 1 cut(s) | 33 |
| Psp6I | CCWGG | 1 cut(s) | 250 |
| PspGI | CCWGG | 1 cut(s) | 250 |
| PspN4I | GGNNCC | 1 cut(s) | 249 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 132, 164 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| SapI | GCTCTTC | 1 cut(s) | 261 |
| SaqAI | TTAA | 1 cut(s) | 66 |
| Sau3AI | GATC | 2 cut(s) | 87, 103 |
| ScrFI | CCNGG | 1 cut(s) | 252 |
| SetI | ASST | 6 cut(s) | 87, 122, 253, 286, 307, 357 |
| SfaNI | GCATC | 2 cut(s) | 187, 208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| Sse9I | AATT | 1 cut(s) | 37 |
| StyD4I | CCNGG | 1 cut(s) | 250 |
| TaaI | ACNGT | 1 cut(s) | 349 |
| TaiI | ACGT | 2 cut(s) | 286, 307 |
| TasI | AATT | 1 cut(s) | 37 |
| TfiI | GAWTC | 2 cut(s) | 7, 19 |
| Tru1I | TTAA | 1 cut(s) | 66 |
| Tru9I | TTAA | 1 cut(s) | 66 |
| TscAI | CASTG | 1 cut(s) | 354 |
| TspDTI | ATGAA | 3 cut(s) | 153, 171, 273 |
| TspRI | CASTG | 1 cut(s) | 354 |
| Zsp2I | ATGCAT | 1 cut(s) | 223 |