Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002909.1

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

121392 .. 127433

Gene Structure 6042 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

atgccagcttgtccaggaccacgcctccaaccgccatggcctgcacgtcgtcggcgccgacagtcgatggtaattcgtttgcagcccagaagtcggcgatcctctctctctatctccgtgaagcctcgtgtgattgtggacttgtttaaggaaatgtgcattggtggttttgaagctagtgtaatcactgttctgtatcttttatcagccattgggggcaaaaaaactttccggtgggtggtagccggtgatcggaatccggcgaaaattggcaggattcttgcgaatttggccggaatccggcggccggtgaccggaatccggttgccgcatataatgcatcctcgtcttcctctcaccctccagagcagaatccacatccatctctctcttcaaatccaacgccctagcctattctccgccgccttcaatagttcaattgatccccaaactcctccgcctccctcttccgcttcctctccgccgcgcagggctcgaaattcctggtcgcgccgactcaatccaatagtccgagttccgcgaaattgtgagctcgctaataacattgttatcgttagagagcacagaggtagaagttggacaagcagtgttggccgcagattctcccagatcttctctcagattataagatcaaactgcgctgaaatgacttcccttcaaatctcccccaacacaattactcgacctctcaatctccgccgtcaattcagctcaaacttggaccaaggggtccgactaatcaatggccggagacctgtgatggcttgccttagccttgacgtggaagcaccagttactgcatcaaaatcagggttttcgaagagcaaggaggtcatagagacagaagcgaaggttctggtggggacatacgcaagaactccagtggtgttggccagtggcaaaggttgtaaattgtacgacatcgaggggagagagtatttggatttgagctcagggattgcggtgaatgcacttggacatggtgatgaggactggttgaaggctgtggttgaacaggccaataccctcactcatgtcagcaatgtctactactccatccctcaggtggaactagcagagcgtttggtgggctcttgttttgcagaccgtgtgttcttcactaattctggaactgaagcaaacgaagcagccattaaatttgcgaggaagtttcagagacacaatcatcccgatgtgaaagagcctgccacaaacttcatatctttcactaacagcttccatggcaggaccataggtgcgcttgccttgactagcaaagagtattacaggtctccgtttgagcccgtcatgcctggagtcacatttgcagagtatggaaatatagaagctaccagaaaattgattcagcctggaaaaactgctgcagtttttgttgaacctatccagggtgaagggggcatatacagtgctaccaaggagtttctgcaatttctgcgtactgcttgtgatgaggctggggctcttctggtgttcgacgaggttcaatgtggtttaggccgaactgggtatctgtgggcgcatgaggcatttggtgtgttcccagatataatgacactagctaagccactagctggaggcctacccattggagctgcattggtgactgaaagagttgcttctgccatagctttcggtgaccatggaagtacttttgccggtgcacctctcgtgtgcaatgctgccttagccgttctcaaaaagatatcaaatcccaattttctggacagtgtctctaagaaaggtctctacttcaaacatatcttaaatcagaagctgggaggaaaccctcatgtgagagaaatacgcggttttgggcttattattggagttgaattggatgtccctgcctcacctcttgtggatgcatgtagaagtgccggccttctagtgttaactgctggaaaaggcaatgttgtgaggctagtgcctccattgatcataagtgagcaggagcttgatcgtgcagctgagattttgtaccaagcgttgcctgtacttgaccaaaaaaattcaatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

686

Amino Acids

75.1

Weight (kDa)

9.92

Isoelectric Point (pI)

54.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	300 - 677	4.2e-113	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	647
AasI	GACNNNNNNGTC	1 cut(s)	749
AccB1I	GGYRCC	1 cut(s)	54
AccB7I	CCANNNNNTGG	1 cut(s)	1613
AccI	GTMKAC	1 cut(s)	1068
AccII	CGCG	4 cut(s)	487, 511, 541, 1848
AclWI	GGATC	2 cut(s)	93, 437
AcoI	YGGCCR	5 cut(s)	291, 305, 613, 766, 912
AcsI	RAATTY	4 cut(s)	286, 499, 1178, 2050
AcuI	CTGAAG	1 cut(s)	1176
AcyI	GRCGYC	1 cut(s)	55
AfaI	GTAC	5 cut(s)	938, 1480, 1690, 2021, 2037
AjiI	CACGTC	2 cut(s)	47, 802
AjnI	CCWGG	5 cut(s)	13, 503, 1333, 1390, 1425
AjuI	GAANNNNNNNTTGG	2 cut(s)	144, 176
Alw21I	GWGCWC	4 cut(s)	555, 585, 974, 1705
Alw26I	GTCTC	6 cut(s)	766, 854, 1192, 1317, 1777, 1790
Alw44I	GTGCAC	1 cut(s)	1701
AlwI	GGATC	2 cut(s)	93, 437
AlwNI	CAGNNNCTG	2 cut(s)	818, 1816
ApaLI	GTGCAC	1 cut(s)	1701
ApeKI	GCWGC	6 cut(s)	82, 1169, 1403, 1634, 1721, 2006
ApoI	RAATTY	4 cut(s)	286, 499, 1178, 2050
AspLEI	GCGC	6 cut(s)	57, 489, 513, 662, 1282, 1561
AspS9I	GGNCC	4 cut(s)	17, 742, 751, 1269
AsuHPI	GGTGA	9 cut(s)	260, 322, 349, 997, 1016, 1442, 1654, 1688, 1884
AsuII	TTCGAA	1 cut(s)	839
AvaII	GGWCC	4 cut(s)	17, 742, 751, 1269
AxyI	CCTNAGG	1 cut(s)	1083
BaeGI	GKGCMC	1 cut(s)	1705
BalI	TGGCCA	1 cut(s)	914
BanI	GGYRCC	1 cut(s)	54
BanII	GRGCYC	6 cut(s)	496, 555, 974, 1115, 1326, 1504
BauI	CACGAG	2 cut(s)	126, 1709
BbsI	GAAGAC	1 cut(s)	341
Bbv12I	GWGCWC	4 cut(s)	555, 585, 974, 1705
BbvI	GCAGC	6 cut(s)	94, 1181, 1390, 1621, 1708, 2018
BccI	CCATC	4 cut(s)	61, 390, 775, 1085
BceAI	ACGGC	2 cut(s)	705, 1715
BciT130I	CCWGG	5 cut(s)	15, 505, 1335, 1392, 1427
BclI	TGATCA	1 cut(s)	1977
BcoDI	GTCTC	6 cut(s)	766, 854, 1192, 1317, 1777, 1790
BfaI	CTAG	8 cut(s)	177, 408, 1094, 1293, 1598, 1610, 1928, 1964
BfmI	CTRYAG	1 cut(s)	1404
BfoI	RGCGCY	1 cut(s)	58
BglII	AGATCT	1 cut(s)	630
BlpI	GCTNAGC	1 cut(s)	1602
BmcAI	AGTACT	1 cut(s)	1690
Bme1390I	CCNGG	5 cut(s)	15, 505, 1335, 1392, 1427
Bme18I	GGWCC	4 cut(s)	17, 742, 751, 1269
BmgBI	CACGTC	2 cut(s)	47, 802
BmgT120I	GGNCC	4 cut(s)	17, 742, 751, 1269
BmiI	GGNNCC	2 cut(s)	56, 752
BmrFI	CCNGG	5 cut(s)	15, 505, 1335, 1392, 1427
BmrI	ACTGGG	1 cut(s)	1554
BmsI	GCATC	3 cut(s)	349, 830, 1894
BmuI	ACTGGG	1 cut(s)	1554
BpiI	GAAGAC	1 cut(s)	341
BpmI	CTGGAG	4 cut(s)	347, 885, 1356, 1635
Bpu10I	CCTNAGC	3 cut(s)	791, 973, 1726
Bpu1102I	GCTNAGC	1 cut(s)	1602
Bpu14I	TTCGAA	1 cut(s)	839
BsaBI	GATNNNNATC	1 cut(s)	255
BsaHI	GRCGYC	1 cut(s)	55
BsaI	GGTCTC	3 cut(s)	766, 1317, 1790
BsaJI	CCNNGG	6 cut(s)	35, 745, 1261, 1426, 1455, 1681
BsaWI	WCCGGW	3 cut(s)	231, 314, 321
BsaXI	ACNNNNNCTCC	2 cut(s)	9, 39
Bse118I	RCCGGY	4 cut(s)	245, 307, 1697, 1919
Bse1I	ACTGG	5 cut(s)	812, 902, 915, 1019, 1549
Bse21I	CCTNAGG	1 cut(s)	1083
Bse3DI	GCAATG	3 cut(s)	1069, 1723, 1957
Bse8I	GATNNNNATC	1 cut(s)	255
BseBI	CCWGG	5 cut(s)	15, 505, 1335, 1392, 1427
BseDI	CCNNGG	6 cut(s)	35, 745, 1261, 1426, 1455, 1681
BseGI	GGATG	6 cut(s)	340, 378, 1077, 1207, 1885, 1909
BseJI	GATNNNNATC	1 cut(s)	255
BseMI	GCAATG	3 cut(s)	1069, 1723, 1957
BseMII	CTCAG	4 cut(s)	653, 987, 1097, 2001
BseNI	ACTGG	5 cut(s)	812, 902, 915, 1019, 1549
BseRI	GAGGAG	1 cut(s)	444
BseSI	GKGCMC	1 cut(s)	1705
BseX3I	CGGCCG	1 cut(s)	305
BseXI	GCAGC	6 cut(s)	94, 1181, 1390, 1621, 1708, 2018
BseYI	CCCAGC	2 cut(s)	1496, 1816
BsgI	GTGCAG	2 cut(s)	27, 2025
Bsh1236I	CGCG	4 cut(s)	487, 511, 541, 1848
Bsh1285I	CGRYCG	1 cut(s)	308
BshNI	GGYRCC	1 cut(s)	54
BsiEI	CGRYCG	1 cut(s)	308
BsiHKAI	GWGCWC	4 cut(s)	555, 585, 974, 1705
BslFI	GGGAC	2 cut(s)	898, 1868
BsmAI	GTCTC	6 cut(s)	766, 854, 1192, 1317, 1777, 1790
BsmFI	GGGAC	2 cut(s)	898, 1868
BsmI	GAATGC	1 cut(s)	994
Bso31I	GGTCTC	3 cut(s)	766, 1317, 1790
Bsp119I	TTCGAA	1 cut(s)	839
Bsp1286I	GDGCHC	8 cut(s)	496, 555, 585, 974, 1115, 1326, 1504, 1705
Bsp143I	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
Bsp1720I	GCTNAGC	1 cut(s)	1602
Bsp19I	CCATGG	3 cut(s)	35, 1261, 1681
BspCNI	CTCAG	4 cut(s)	652, 986, 1096, 2002
BspFNI	CGCG	4 cut(s)	487, 511, 541, 1848
BspLI	GGNNCC	2 cut(s)	56, 752
BspMAI	CTGCAG	1 cut(s)	1408
BspPI	GGATC	2 cut(s)	93, 437
BspQI	GCTCTTC	2 cut(s)	836, 1509
BspT104I	TTCGAA	1 cut(s)	839
BspT107I	GGYRCC	1 cut(s)	54
BspTNI	GGTCTC	3 cut(s)	766, 1317, 1790
BsrDI	GCAATG	3 cut(s)	1069, 1723, 1957
BsrFI	RCCGGY	4 cut(s)	245, 307, 1697, 1919
BsrI	ACTGG	5 cut(s)	812, 902, 915, 1019, 1549
BssAI	RCCGGY	4 cut(s)	245, 307, 1697, 1919
BssECI	CCNNGG	6 cut(s)	35, 745, 1261, 1426, 1455, 1681
BssMI	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
BssNI	GRCGYC	1 cut(s)	55
BssSI	CACGAG	2 cut(s)	126, 1709
BssT1I	CCWWGG	5 cut(s)	35, 745, 1261, 1455, 1681
Bst2BI	CACGAG	2 cut(s)	126, 1709
Bst2UI	CCWGG	5 cut(s)	15, 505, 1335, 1392, 1427
Bst4CI	ACNGT	5 cut(s)	63, 190, 1130, 1448, 1769
Bst6I	CTCTTC	4 cut(s)	396, 472, 836, 1509
BstACI	GRCGYC	1 cut(s)	55
BstAPI	GCANNNNNTGC	2 cut(s)	337, 1474
BstBI	TTCGAA	1 cut(s)	839
BstC8I	GCNNGC	7 cut(s)	6, 42, 555, 787, 1227, 1284, 1921
BstDEI	CTNAG	8 cut(s)	639, 791, 973, 1083, 1602, 1726, 1776, 2010
BstDSI	CCRYGG	3 cut(s)	35, 1261, 1681
BstEII	GGTNACC	2 cut(s)	310, 1676
BstF5I	GGATG	6 cut(s)	340, 378, 1077, 1207, 1885, 1909
BstFNI	CGCG	4 cut(s)	487, 511, 541, 1848
BstH2I	RGCGCY	1 cut(s)	58
BstHHI	GCGC	6 cut(s)	57, 489, 513, 662, 1282, 1561
BstKTI	GATC	7 cut(s)	101, 253, 445, 633, 653, 1980, 2002
BstMAI	GTCTC	6 cut(s)	766, 854, 1192, 1317, 1777, 1790
BstMBI	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
BstMCI	CGRYCG	1 cut(s)	308
BstNI	CCWGG	5 cut(s)	15, 505, 1335, 1392, 1427
BstNSI	RCATGY	1 cut(s)	1911
BstPI	GGTNACC	2 cut(s)	310, 1676
BstSCI	CCNGG	5 cut(s)	13, 503, 1333, 1390, 1425
BstSFI	CTRYAG	1 cut(s)	1404
BstSLI	GKGCMC	1 cut(s)	1705
BstUI	CGCG	4 cut(s)	487, 511, 541, 1848
BstV1I	GCAGC	6 cut(s)	94, 1181, 1390, 1621, 1708, 2018
BstV2I	GAAGAC	1 cut(s)	341
BstX2I	RGATCY	1 cut(s)	630
BstXI	CCANNNNNNTGG	1 cut(s)	1762
BstYI	RGATCY	1 cut(s)	630
BstZI	CGGCCG	1 cut(s)	305
Bsu36I	CCTNAGG	1 cut(s)	1083
BtgI	CCRYGG	3 cut(s)	35, 1261, 1681
BtrI	CACGTC	2 cut(s)	47, 802
BtsCI	GGATG	6 cut(s)	340, 378, 1077, 1207, 1885, 1909
BtsI	GCAGTG	1 cut(s)	613
BtsIMutI	CAGTG	6 cut(s)	186, 613, 909, 922, 1453, 1774
Cac8I	GCNNGC	7 cut(s)	6, 42, 555, 787, 1227, 1284, 1921
CaiI	CAGNNNCTG	2 cut(s)	818, 1816
CfoI	GCGC	6 cut(s)	57, 489, 513, 662, 1282, 1561
Cfr10I	RCCGGY	4 cut(s)	245, 307, 1697, 1919
Cfr13I	GGNCC	4 cut(s)	17, 742, 751, 1269
Csp6I	GTAC	5 cut(s)	937, 1479, 1689, 2020, 2036
CviAII	CATG	9 cut(s)	36, 1001, 1055, 1262, 1330, 1562, 1682, 1832, 1908
CviQI	GTAC	5 cut(s)	937, 1479, 1689, 2020, 2036
DdeI	CTNAG	8 cut(s)	639, 791, 973, 1083, 1602, 1726, 1776, 2010
DinI	GGCGCC	1 cut(s)	56
DpnI	GATC	7 cut(s)	100, 252, 444, 632, 652, 1979, 2001
DpnII	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
DrdI	GACNNNNNNGTC	1 cut(s)	749
DseDI	GACNNNNNNGTC	1 cut(s)	749
EaeI	YGGCCR	5 cut(s)	291, 305, 613, 766, 912
EagI	CGGCCG	1 cut(s)	305
Eam1104I	CTCTTC	4 cut(s)	396, 472, 836, 1509
EarI	CTCTTC	4 cut(s)	396, 472, 836, 1509
EciI	GGCGGA	4 cut(s)	409, 447, 471, 707
Ecl136II	GAGCTC	2 cut(s)	553, 972
EclXI	CGGCCG	1 cut(s)	305
Eco130I	CCWWGG	5 cut(s)	35, 745, 1261, 1455, 1681
Eco147I	AGGCCT	1 cut(s)	1620
Eco24I	GRGCYC	6 cut(s)	496, 555, 974, 1115, 1326, 1504
Eco31I	GGTCTC	3 cut(s)	766, 1317, 1790
Eco32I	GATATC	1 cut(s)	1746
Eco47I	GGWCC	4 cut(s)	17, 742, 751, 1269
Eco52I	CGGCCG	1 cut(s)	305
Eco53kI	GAGCTC	2 cut(s)	553, 972
Eco57I	CTGAAG	1 cut(s)	1176
Eco81I	CCTNAGG	1 cut(s)	1083
Eco91I	GGTNACC	2 cut(s)	310, 1676
EcoICRI	GAGCTC	2 cut(s)	553, 972
EcoO65I	GGTNACC	2 cut(s)	310, 1676
EcoRII	CCWGG	5 cut(s)	13, 503, 1333, 1390, 1425
EcoRV	GATATC	1 cut(s)	1746
EcoT14I	CCWWGG	5 cut(s)	35, 745, 1261, 1455, 1681
EcoT22I	ATGCAT	2 cut(s)	342, 1909
EcoT38I	GRGCYC	6 cut(s)	496, 555, 974, 1115, 1326, 1504
EgeI	GGCGCC	1 cut(s)	56
EheI	GGCGCC	1 cut(s)	56
ErhI	CCWWGG	5 cut(s)	35, 745, 1261, 1455, 1681
FaeI	CATG	9 cut(s)	39, 1004, 1058, 1265, 1333, 1565, 1685, 1835, 1911
FalI	AAGNNNNNCTT	2 cut(s)	1642, 1674
FaqI	GGGAC	2 cut(s)	898, 1868
FatI	CATG	9 cut(s)	35, 1000, 1054, 1261, 1329, 1561, 1681, 1831, 1907
FbaI	TGATCA	1 cut(s)	1977
FblI	GTMKAC	1 cut(s)	1068
FokI	GGATG	6 cut(s)	327, 365, 1064, 1194, 1892, 1916
FriOI	GRGCYC	6 cut(s)	496, 555, 974, 1115, 1326, 1504
FspBI	CTAG	8 cut(s)	177, 408, 1094, 1293, 1598, 1610, 1928, 1964
GlaI	GCGC	6 cut(s)	56, 488, 512, 661, 1281, 1560
GsaI	CCCAGC	2 cut(s)	1500, 1820
GsuI	CTGGAG	4 cut(s)	347, 885, 1356, 1635
HaeII	RGCGCY	1 cut(s)	58
HhaI	GCGC	6 cut(s)	57, 489, 513, 662, 1282, 1561
Hin1I	GRCGYC	1 cut(s)	55
Hin1II	CATG	9 cut(s)	39, 1004, 1058, 1265, 1333, 1565, 1685, 1835, 1911
Hin6I	GCGC	6 cut(s)	55, 487, 511, 660, 1280, 1559
HinP1I	GCGC	6 cut(s)	55, 487, 511, 660, 1280, 1559
HincII	GTYRAC	1 cut(s)	1935
HindII	GTYRAC	1 cut(s)	1935
HinfI	GANTC	9 cut(s)	256, 277, 297, 318, 372, 516, 621, 1338, 1384
HpaI	GTTAAC	1 cut(s)	1935
HphI	GGTGA	9 cut(s)	260, 322, 349, 997, 1016, 1442, 1654, 1688, 1884
Hpy166II	GTNNAC	4 cut(s)	139, 1069, 1703, 1935
Hpy188I	TCNGA	6 cut(s)	255, 533, 642, 755, 1197, 1812
Hpy188III	TCNNGA	4 cut(s)	364, 1149, 1211, 1763
Hpy8I	GTNNAC	4 cut(s)	139, 1069, 1703, 1935
Hpy99I	CGWCG	3 cut(s)	51, 54, 1520
HpyAV	CCTTC	6 cut(s)	436, 686, 865, 1015, 1427, 1934
HpyCH4III	ACNGT	5 cut(s)	63, 190, 1130, 1448, 1769
HpyCH4IV	ACGT	2 cut(s)	46, 801
HpyF3I	CTNAG	8 cut(s)	639, 791, 973, 1083, 1602, 1726, 1776, 2010
HpySE526I	ACGT	2 cut(s)	46, 801
Hsp92I	GRCGYC	1 cut(s)	55
Hsp92II	CATG	9 cut(s)	39, 1004, 1058, 1265, 1333, 1565, 1685, 1835, 1911
HspAI	GCGC	6 cut(s)	55, 487, 511, 660, 1280, 1559
KasI	GGCGCC	1 cut(s)	54
KroI	GCCGGC	1 cut(s)	1919
KroNI	GCCGGC	1 cut(s)	1921
Ksp22I	TGATCA	1 cut(s)	1977
KspAI	GTTAAC	1 cut(s)	1935
Kzo9I	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
LguI	GCTCTTC	2 cut(s)	836, 1509
LmnI	GCTCC	2 cut(s)	1631, 1993
Lsp1109I	GCAGC	6 cut(s)	94, 1181, 1390, 1621, 1708, 2018
LweI	GCATC	3 cut(s)	349, 830, 1894
MaeI	CTAG	8 cut(s)	177, 408, 1094, 1293, 1598, 1610, 1928, 1964
MaeII	ACGT	2 cut(s)	46, 801
MaeIII	GTNAC	5 cut(s)	310, 814, 1339, 1642, 1676
MalI	GATC	7 cut(s)	100, 252, 444, 632, 652, 1979, 2001
MboI	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
MboII	GAAGA	7 cut(s)	341, 383, 459, 625, 853, 1129, 1496
MfeI	CAATTG	1 cut(s)	438
MflI	RGATCY	1 cut(s)	630
MhlI	GDGCHC	8 cut(s)	496, 555, 585, 974, 1115, 1326, 1504, 1705
MlsI	TGGCCA	1 cut(s)	914
MluNI	TGGCCA	1 cut(s)	914
Mly113I	GGCGCC	1 cut(s)	55
MlyI	GAGTC	2 cut(s)	510, 1347
MmeI	TCCRAC	4 cut(s)	52, 424, 578, 778
Mox20I	TGGCCA	1 cut(s)	914
Mph1103I	ATGCAT	2 cut(s)	342, 1909
MroNI	GCCGGC	1 cut(s)	1919
MscI	TGGCCA	1 cut(s)	914
MseI	TTAA	4 cut(s)	147, 1176, 1805, 1934
MslI	CAYNNNNRTG	2 cut(s)	1005, 1212
Msp20I	TGGCCA	1 cut(s)	914
MspA1I	CMGCKG	1 cut(s)	2009
MspR9I	CCNGG	5 cut(s)	15, 505, 1335, 1392, 1427
MunI	CAATTG	1 cut(s)	438
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	5 cut(s)	15, 505, 1335, 1392, 1427
MvnI	CGCG	4 cut(s)	487, 511, 541, 1848
NaeI	GCCGGC	1 cut(s)	1921
NarI	GGCGCC	1 cut(s)	55
NcoI	CCATGG	3 cut(s)	35, 1261, 1681
NdeII	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
NgoMIV	GCCGGC	1 cut(s)	1919
NlaIII	CATG	9 cut(s)	39, 1004, 1058, 1265, 1333, 1565, 1685, 1835, 1911
NlaIV	GGNNCC	2 cut(s)	56, 752
NmuCI	GTSAC	4 cut(s)	310, 1339, 1642, 1676
NsiI	ATGCAT	2 cut(s)	342, 1909
NspI	RCATGY	1 cut(s)	1911
NspV	TTCGAA	1 cut(s)	839
PceI	AGGCCT	1 cut(s)	1620
PciSI	GCTCTTC	2 cut(s)	836, 1509
PcsI	WCGNNNNNNNCGW	1 cut(s)	55
PctI	GAATGC	1 cut(s)	994
PdiI	GCCGGC	1 cut(s)	1921
PfeI	GAWTC	7 cut(s)	256, 277, 297, 318, 372, 621, 1384
PflFI	GACNNNGTC	1 cut(s)	1769
PflMI	CCANNNNNTGG	1 cut(s)	1613
PfoI	TCCNGGA	1 cut(s)	13
PleI	GAGTC	2 cut(s)	510, 1346
PluTI	GGCGCC	1 cut(s)	58
PpsI	GAGTC	2 cut(s)	510, 1346
PsiI	TTATAA	1 cut(s)	647
Psp124BI	GAGCTC	2 cut(s)	555, 974
Psp6I	CCWGG	5 cut(s)	13, 503, 1333, 1390, 1425
PspEI	GGTNACC	2 cut(s)	310, 1676
PspFI	CCCAGC	2 cut(s)	1496, 1816
PspGI	CCWGG	5 cut(s)	13, 503, 1333, 1390, 1425
PspN4I	GGNNCC	2 cut(s)	56, 752
PspPI	GGNCC	4 cut(s)	17, 742, 751, 1269
PsrI	GAACNNNNNNTAC	2 cut(s)	174, 206
PstI	CTGCAG	1 cut(s)	1408
PstNI	CAGNNNCTG	2 cut(s)	818, 1816
PsuI	RGATCY	1 cut(s)	630
PsyI	GACNNNGTC	1 cut(s)	1769
PvuII	CAGCTG	1 cut(s)	2009
RsaI	GTAC	5 cut(s)	938, 1480, 1690, 2021, 2037
RsaNI	GTAC	5 cut(s)	937, 1479, 1689, 2020, 2036
RseI	CAYNNNNRTG	2 cut(s)	1005, 1212
SacI	GAGCTC	2 cut(s)	555, 974
SapI	GCTCTTC	2 cut(s)	836, 1509
SaqAI	TTAA	4 cut(s)	147, 1176, 1805, 1934
Sau3AI	GATC	7 cut(s)	98, 250, 442, 630, 650, 1977, 1999
Sau96I	GGNCC	4 cut(s)	17, 742, 751, 1269
ScaI	AGTACT	1 cut(s)	1690
SchI	GAGTC	2 cut(s)	510, 1347
ScrFI	CCNGG	5 cut(s)	15, 505, 1335, 1392, 1427
SduI	GDGCHC	8 cut(s)	496, 555, 585, 974, 1115, 1326, 1504, 1705
SfaNI	GCATC	3 cut(s)	349, 830, 1894
SfcI	CTRYAG	1 cut(s)	1404
SfoI	GGCGCC	1 cut(s)	56
SfuI	TTCGAA	1 cut(s)	839
SinI	GGWCC	4 cut(s)	17, 742, 751, 1269
SmiMI	CAYNNNNRTG	2 cut(s)	1005, 1212
SseBI	AGGCCT	1 cut(s)	1620
SspDI	GGCGCC	1 cut(s)	54
SspMI	CTAG	8 cut(s)	177, 408, 1094, 1293, 1598, 1610, 1928, 1964
SstI	GAGCTC	2 cut(s)	555, 974
StuI	AGGCCT	1 cut(s)	1620
StyD4I	CCNGG	5 cut(s)	13, 503, 1333, 1390, 1425
StyI	CCWWGG	5 cut(s)	35, 745, 1261, 1455, 1681
TaaI	ACNGT	5 cut(s)	63, 190, 1130, 1448, 1769
TaiI	ACGT	2 cut(s)	49, 804
TaqI	TCGA	6 cut(s)	65, 496, 703, 839, 945, 1515
TatI	WGTACW	2 cut(s)	1688, 2035
TauI	GCSGC	5 cut(s)	307, 331, 425, 487, 618
TfiI	GAWTC	7 cut(s)	256, 277, 297, 318, 372, 621, 1384
Tru1I	TTAA	4 cut(s)	147, 1176, 1805, 1934
Tru9I	TTAA	4 cut(s)	147, 1176, 1805, 1934
TscAI	CASTG	6 cut(s)	193, 613, 909, 922, 1453, 1774
TseFI	GTSAC	4 cut(s)	310, 1339, 1642, 1676
TseI	GCWGC	6 cut(s)	82, 1169, 1403, 1634, 1721, 2006
Tsp45I	GTSAC	4 cut(s)	310, 1339, 1642, 1676
TspDTI	ATGAA	1 cut(s)	1228
TspGWI	ACGGA	2 cut(s)	106, 1305
TspRI	CASTG	6 cut(s)	193, 613, 909, 922, 1453, 1774
Tth111I	GACNNNGTC	1 cut(s)	1769
Van91I	CCANNNNNTGG	1 cut(s)	1613
VneI	GTGCAC	1 cut(s)	1701
VpaK11BI	GGWCC	4 cut(s)	17, 742, 751, 1269
XapI	RAATTY	4 cut(s)	286, 499, 1178, 2050
XceI	RCATGY	1 cut(s)	1911
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1084
XmiI	GTMKAC	1 cut(s)	1068
XspI	CTAG	8 cut(s)	177, 408, 1094, 1293, 1598, 1610, 1928, 1964
ZrmI	AGTACT	1 cut(s)	1690
Zsp2I	ATGCAT	2 cut(s)	342, 1909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.