Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003551.1

Orthogroup ID

OG0005611

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 3831

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003551.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

atcggtggagttcagttgcagctgaagagcaagttccctttcgatgtaatgtggagtgaagacccacattttcatgcaaagtcgaagtcggaccatgagaatgggcactttgtgtttgaaggtgaagcatcgtgtagctcttattcggatgggaagttgctagatgtggctgggagggcttgctctgtttcggggaatgaaatgagttttgagtctggtgcggtgaatttggaaaaatgctttgatcataagggaaagaaggttggtggtcgaaggccaagtcatagtctgcgccgccggcgcaagggggcctctttggattatggaaagctgttttcagtttcctcaagtgatatggtacagtcagattcccaagacatggctggacctccttacagaaatagtaaaatgggggacgaggttactgaagttcccgtcaattcaggaaggccaagtcatggtattcaccgccgccgcaaggggcgttctgttgattatggaaagatattttcggtttcaccatatgatagttcagatagaagagacattcctacacctccttccagcataagtaaagtggggaacaacggtagtgaagttccttccagttcagatggcatggaagctccaacagacactggtgggtcagaaagagtttcacatcttgagttgaatgaacatgttggtaaaactaaatcaattcagaatgatgcttcttctgttgaaaatttaggctgcaatgagcaagagaagccagtttatgacggtaatgataaaactatggttcgggtattggaacaagcactagacgaagagcatactgctcgtactgctctttattatgaattggagaaggagagaagtgctgctgctactgcggcagatgaggccatggcaatgatattgcgtctgcaagaagagaaggcatcaattgaaatggaggcaaggcaataccagaggatgatacaggaaaaatcagcttatgatgctgaggaaatgaacattctcaaagagatcttacttaggagagaaagggaaaagcatttcttggagaaggaagttgaatactacaggcaaatactttttgggaacgatcaagttgatgatgacatgcatgatgttgctgccacacaagcacaaagtatttctctgcattcaagtgaagagctggtgtcgatgcaggagcggacaaactattcaattagtgagaagtcaaagttgaaaatggcaaatagttctccagattacggggccctatcaagtgactcacaaaatcgcactctggccttggggaaagaactaccagttctggatttggaagaagatgacacttcgaagcatgtggacatgcacttgcttccaagcactgacagccattcacatatcttaaatagtaggtatgagatcagtcacgagtttcaagagaagggaatggtgtctgtggatgagagaccagtttctcggggaaaagaggtccaggtagtgaatgctgagggacttgaattggttgaaaaaactattcctccgaacgaacaggaacttgctttagctggtagcaatgtggatcatggaagcaaagatccacctcgcttaacgtctaatacagagcctcgtgttcatgatattcatgttattgacgataagtctgatttgtataatgaaaagagggcagagaaaagtgaacagctagtagcaaatgctaccttagatatttctgaaaaacacaagagtatgacagggttgggaaccgagcttaaagtgcacaaagttggttcagacagtggattgccaatagtggatggctctcaaggcaaagctttaccttacaatatgcggaggaattccatgtctgaggttgattatgaaagatcgaaaatagacagtaaactgcaccgaggtggtccagacatggcacctaattgcatgcggaggaattccatgtctgcaattgattatgacagatggaaaattgacaacaaagtggacagaggtagctcagacacggaacctaaagatgtgcggaggaattccatgactgcagttgattatgaaagatggaaaatggccaataaatcatacagaggtagttcagacacgtcgccatcaccttctgtcatgcgaagaaattccatgtctgcagttgattatgaaagatgcaaacttgacaatgaagttgagtggcttagagaaaggttaaggattgtgcaagagggaagagagaagctcaacctctcagtgggccacagagaaagggaaaaagttcagctgaaacttttggaagatatagcaggccaactccaagagattcggcaattgacggaacctggaaaggtcaagtgccaggctgcattgccgcctccatcatctaaggttatgtcaaagaaaagacgatggcgaactttgtctctaggagtgcatagaagtacctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zein-binding

Protein Analysis

809

Amino Acids

90.89

Weight (kDa)

5.99

Isoelectric Point (pI)

55.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005611)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04890 AT4G13630 AT4G13630
fragaria_vesca	FvH4_4g15740 FvH4_4g15740
malus_domestica	MD04G1008700.v1.1 MD13G1285200.v1.1
prunus_persica	Prupe.1G008000_v2.0.a1 Prupe.1G008000_v2.0.a1 Prupe.1G008000_v2.0.a1 Prupe.1G008000_v2.0.a1
pyrus_communis	pycom04g00640 pycom04g00650 pycom420g01380
rosa_chinensis	RchiOBHm_Chr4g0415341
rosa_laevigata	RLG00000008078
rosa_multiflora	Rmu_sc0003551.1_g000001 Rmu_sc0028326.1_g000005
rosa_roxburghii	Rroxscaffold_5G00359120
rosa_rugosa	Rorug04G0133000 Rorug04G0133100 Rorug04G0133100 Rorug04G0133200
rosa_samantha	Rh4AG194100 Rh4BG192500 Rh4CG205100 Rh4DG191800
rosa_wichuraiana	Rw4G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1912
AccB7I	CCANNNNNTGG	2 cut(s)	379, 458
AccBSI	CCGCTC	1 cut(s)	1186
AclWI	GGATC	2 cut(s)	1572, 1574
AcoI	YGGCCR	1 cut(s)	2064
AcsI	RAATTY	6 cut(s)	226, 727, 1840, 1933, 2026, 2125
AcuI	CTGAAG	2 cut(s)	44, 447
AdeI	CACNNNGTG	1 cut(s)	112
AfaI	GTAC	3 cut(s)	360, 829, 2425
AfiI	CCNNNNNNNGG	6 cut(s)	304, 379, 458, 478, 1247, 2236
AflIII	ACRYGT	2 cut(s)	679, 2094
AhdI	GACNNNNNGTC	1 cut(s)	1642
AjiI	CACGTC	1 cut(s)	2097
AjnI	CCWGG	3 cut(s)	1476, 2323, 2340
AleI	CACNNNNGTG	1 cut(s)	1896
Alw21I	GWGCWC	1 cut(s)	1764
Alw26I	GTCTC	3 cut(s)	537, 1444, 2409
Alw44I	GTGCAC	1 cut(s)	1760
AlwI	GGATC	2 cut(s)	1572, 1574
AlwNI	CAGNNNCTG	1 cut(s)	638
Ama87I	CYCGRG	1 cut(s)	1461
AoxI	GGCC	9 cut(s)	275, 309, 449, 888, 1251, 1284, 2064, 2239, 2290
ApaI	GGGCCC	1 cut(s)	1255
ApaLI	GTGCAC	1 cut(s)	1760
ApeKI	GCWGC	6 cut(s)	19, 735, 866, 869, 1124, 2345
ApoI	RAATTY	6 cut(s)	226, 727, 1840, 1933, 2026, 2125
ArsI	GACNNNNNNTTYG	4 cut(s)	71, 103, 265, 297
Asp700I	GAANNNNTTC	2 cut(s)	2125, 2259
AspLEI	GCGC	2 cut(s)	294, 303
AspS9I	GGNCC	8 cut(s)	91, 309, 386, 1251, 1252, 1474, 1901, 2239
AsuHPI	GGTGA	5 cut(s)	134, 235, 458, 510, 2097
AsuII	TTCGAA	1 cut(s)	1334
AvaI	CYCGRG	1 cut(s)	1461
AvaII	GGWCC	4 cut(s)	91, 386, 1474, 1901
BaeGI	GKGCMC	3 cut(s)	108, 1255, 1764
BalI	TGGCCA	1 cut(s)	2066
BanI	GGYRCC	1 cut(s)	1912
BanII	GRGCYC	1 cut(s)	1255
BauI	CACGAG	2 cut(s)	1412, 1611
BbsI	GAAGAC	1 cut(s)	66
Bbv12I	GWGCWC	1 cut(s)	1764
BbvCI	CCTCAGC	2 cut(s)	990, 1491
BbvI	GCAGC	6 cut(s)	31, 722, 853, 856, 1111, 2332
BccI	CCATC	8 cut(s)	143, 608, 1793, 1956, 2049, 2110, 2368, 2385
BcgI	CGANNNNNNTGC	2 cut(s)	806, 840
BciT130I	CCWGG	3 cut(s)	1478, 2325, 2342
BclI	TGATCA	1 cut(s)	244
BcoDI	GTCTC	3 cut(s)	537, 1444, 2409
BfaI	CTAG	4 cut(s)	161, 806, 1688, 2408
BfmI	CTRYAG	3 cut(s)	1069, 2037, 2136
BglII	AGATCT	1 cut(s)	1014
Bme1390I	CCNGG	3 cut(s)	1478, 2325, 2342
Bme18I	GGWCC	4 cut(s)	91, 386, 1474, 1901
BmeRI	GACNNNNNGTC	1 cut(s)	1642
BmeT110I	CYCGRG	1 cut(s)	1461
BmgBI	CACGTC	1 cut(s)	2097
BmgT120I	GGNCC	8 cut(s)	91, 309, 386, 1251, 1252, 1474, 1901, 2239
BmiI	GGNNCC	7 cut(s)	310, 1252, 1253, 1747, 1914, 2007, 2322
BmrFI	CCNGG	3 cut(s)	1478, 2325, 2342
BmsI	GCATC	6 cut(s)	137, 700, 935, 976, 1167, 2144
BpiI	GAAGAC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	2208, 2240
BpmI	CTGGAG	1 cut(s)	1224
Bpu10I	CCTNAGC	2 cut(s)	990, 1491
Bpu14I	TTCGAA	1 cut(s)	1334
BpuEI	CTTGAG	3 cut(s)	331, 686, 1791
BsaI	GGTCTC	1 cut(s)	1444
BsaJI	CCNNGG	3 cut(s)	891, 1287, 1894
BsaXI	ACNNNNNCTCC	2 cut(s)	1507, 1537
Bsc4I	CCNNNNNNNGG	6 cut(s)	304, 379, 458, 478, 1247, 2236
Bse118I	RCCGGY	1 cut(s)	297
Bse1I	ACTGG	5 cut(s)	606, 643, 755, 1304, 1454
Bse3DI	GCAATG	4 cut(s)	745, 903, 1564, 2348
BseBI	CCWGG	3 cut(s)	1478, 2325, 2342
BseDI	CCNNGG	3 cut(s)	891, 1287, 1894
BseGI	GGATG	4 cut(s)	154, 966, 1450, 1804
BseLI	CCNNNNNNNGG	6 cut(s)	304, 379, 458, 478, 1247, 2236
BseMI	GCAATG	4 cut(s)	745, 903, 1564, 2348
BseMII	CTCAG	5 cut(s)	981, 1482, 1842, 2010, 2247
BseNI	ACTGG	5 cut(s)	606, 643, 755, 1304, 1454
BseSI	GKGCMC	3 cut(s)	108, 1255, 1764
BseXI	GCAGC	6 cut(s)	31, 722, 853, 856, 1111, 2332
BseYI	CCCAGC	1 cut(s)	170
BsgI	GTGCAG	1 cut(s)	1874
BshFI	GGCC	9 cut(s)	277, 311, 451, 890, 1253, 1286, 2066, 2241, 2292
BshNI	GGYRCC	1 cut(s)	1912
BsiHKAI	GWGCWC	1 cut(s)	1764
BsiHKCI	CYCGRG	1 cut(s)	1461
BsiSI	CCGG	1 cut(s)	298
BslFI	GGGAC	2 cut(s)	428, 1509
BslI	CCNNNNNNNGG	6 cut(s)	304, 379, 458, 478, 1247, 2236
BsmAI	GTCTC	3 cut(s)	537, 1444, 2409
BsmFI	GGGAC	2 cut(s)	428, 1509
BsmI	GAATGC	2 cut(s)	1153, 1492
BsnI	GGCC	9 cut(s)	277, 311, 451, 890, 1253, 1286, 2066, 2241, 2292
Bso31I	GGTCTC	1 cut(s)	1444
BsoBI	CYCGRG	1 cut(s)	1461
Bsp119I	TTCGAA	1 cut(s)	1334
Bsp120I	GGGCCC	1 cut(s)	1251
Bsp1286I	GDGCHC	3 cut(s)	108, 1255, 1764
Bsp143I	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
Bsp19I	CCATGG	1 cut(s)	891
BspANI	GGCC	9 cut(s)	277, 311, 451, 890, 1253, 1286, 2066, 2241, 2292
BspCNI	CTCAG	5 cut(s)	982, 1483, 1843, 2009, 2246
BspHI	TCATGA	1 cut(s)	1618
BspLI	GGNNCC	7 cut(s)	310, 1252, 1253, 1747, 1914, 2007, 2322
BspMAI	CTGCAG	2 cut(s)	2041, 2140
BspPI	GGATC	2 cut(s)	1572, 1574
BspQI	GCTCTTC	3 cut(s)	20, 807, 1158
BspT104I	TTCGAA	1 cut(s)	1334
BspT107I	GGYRCC	1 cut(s)	1912
BspTNI	GGTCTC	1 cut(s)	1444
BsrBI	CCGCTC	1 cut(s)	1186
BsrDI	GCAATG	4 cut(s)	745, 903, 1564, 2348
BsrFI	RCCGGY	1 cut(s)	297
BsrI	ACTGG	5 cut(s)	606, 643, 755, 1304, 1454
BssAI	RCCGGY	1 cut(s)	297
BssECI	CCNNGG	3 cut(s)	891, 1287, 1894
BssMI	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
BssSI	CACGAG	2 cut(s)	1412, 1611
BssT1I	CCWWGG	2 cut(s)	891, 1287
Bst2BI	CACGAG	2 cut(s)	1412, 1611
Bst2UI	CCWGG	3 cut(s)	1478, 2325, 2342
Bst4CI	ACNGT	5 cut(s)	363, 590, 767, 1781, 1883
Bst6I	CTCTTC	6 cut(s)	20, 535, 807, 912, 1158, 2209
BstBI	TTCGAA	1 cut(s)	1334
BstC8I	GCNNGC	4 cut(s)	181, 299, 1925, 2290
BstDEI	CTNAG	9 cut(s)	990, 1022, 1491, 1705, 1851, 1996, 2183, 2233, 2367
BstDSI	CCRYGG	1 cut(s)	891
BstF5I	GGATG	4 cut(s)	154, 966, 1450, 1804
BstHHI	GCGC	2 cut(s)	294, 303
BstKTI	GATC	7 cut(s)	247, 1017, 1096, 1407, 1567, 1582, 1871
BstMAI	GTCTC	3 cut(s)	537, 1444, 2409
BstMBI	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
BstNI	CCWGG	3 cut(s)	1478, 2325, 2342
BstNSI	RCATGY	5 cut(s)	683, 1114, 1343, 1351, 1927
BstSCI	CCNGG	3 cut(s)	1476, 2323, 2340
BstSFI	CTRYAG	3 cut(s)	1069, 2037, 2136
BstSLI	GKGCMC	3 cut(s)	108, 1255, 1764
BstV1I	GCAGC	6 cut(s)	31, 722, 853, 856, 1111, 2332
BstV2I	GAAGAC	1 cut(s)	66
BstX2I	RGATCY	2 cut(s)	1014, 1579
BstXI	CCANNNNNNTGG	1 cut(s)	101
BstYI	RGATCY	2 cut(s)	1014, 1579
BsuRI	GGCC	9 cut(s)	277, 311, 451, 890, 1253, 1286, 2066, 2241, 2292
BtgI	CCRYGG	1 cut(s)	891
BtrI	CACGTC	1 cut(s)	2097
BtsCI	GGATG	4 cut(s)	154, 966, 1450, 1804
BtsIMutI	CAGTG	4 cut(s)	636, 1365, 1786, 2241
Cac8I	GCNNGC	4 cut(s)	181, 299, 1925, 2290
CaiI	CAGNNNCTG	1 cut(s)	638
CciI	TCATGA	1 cut(s)	1618
CfoI	GCGC	2 cut(s)	294, 303
Cfr10I	RCCGGY	1 cut(s)	297
Cfr13I	GGNCC	8 cut(s)	91, 309, 386, 1251, 1252, 1474, 1901, 2239
CseI	GACGC	1 cut(s)	896
Csp6I	GTAC	3 cut(s)	359, 828, 2424
CviQI	GTAC	3 cut(s)	359, 828, 2424
DdeI	CTNAG	9 cut(s)	990, 1022, 1491, 1705, 1851, 1996, 2183, 2233, 2367
DpnI	GATC	7 cut(s)	246, 1016, 1095, 1406, 1566, 1581, 1870
DpnII	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
DraIII	CACNNNGTG	1 cut(s)	112
DriI	GACNNNNNGTC	1 cut(s)	1642
EaeI	YGGCCR	1 cut(s)	2064
Eam1104I	CTCTTC	6 cut(s)	20, 535, 807, 912, 1158, 2209
Eam1105I	GACNNNNNGTC	1 cut(s)	1642
EarI	CTCTTC	6 cut(s)	20, 535, 807, 912, 1158, 2209
Eco130I	CCWWGG	2 cut(s)	891, 1287
Eco24I	GRGCYC	1 cut(s)	1255
Eco31I	GGTCTC	1 cut(s)	1444
Eco47I	GGWCC	4 cut(s)	91, 386, 1474, 1901
Eco57I	CTGAAG	2 cut(s)	44, 447
Eco88I	CYCGRG	1 cut(s)	1461
EcoO109I	RGGNCCY	3 cut(s)	309, 1251, 1252
EcoRI	GAATTC	3 cut(s)	1840, 1933, 2026
EcoRII	CCWGG	3 cut(s)	1476, 2323, 2340
EcoT14I	CCWWGG	2 cut(s)	891, 1287
EcoT22I	ATGCAT	1 cut(s)	1116
EcoT38I	GRGCYC	1 cut(s)	1255
ErhI	CCWWGG	2 cut(s)	891, 1287
FalI	AAGNNNNNCTT	2 cut(s)	1031, 1063
FaqI	GGGAC	2 cut(s)	428, 1509
FauNDI	CATATG	1 cut(s)	523
FbaI	TGATCA	1 cut(s)	244
FokI	GGATG	4 cut(s)	161, 973, 1457, 1811
FriOI	GRGCYC	1 cut(s)	1255
FspBI	CTAG	4 cut(s)	161, 806, 1688, 2408
GlaI	GCGC	2 cut(s)	293, 302
GsaI	CCCAGC	1 cut(s)	174
GsuI	CTGGAG	1 cut(s)	1224
HaeIII	GGCC	9 cut(s)	277, 311, 451, 890, 1253, 1286, 2066, 2241, 2292
HapII	CCGG	1 cut(s)	298
HgaI	GACGC	1 cut(s)	896
HhaI	GCGC	2 cut(s)	294, 303
Hin6I	GCGC	2 cut(s)	292, 301
HinP1I	GCGC	2 cut(s)	292, 301
HindIII	AAGCTT	1 cut(s)	1815
HinfI	GANTC	4 cut(s)	212, 368, 1265, 2305
HpaII	CCGG	1 cut(s)	298
HphI	GGTGA	5 cut(s)	134, 235, 458, 510, 2097
Hpy166II	GTNNAC	5 cut(s)	1345, 1682, 1762, 1886, 1984
Hpy188III	TCNNGA	8 cut(s)	444, 665, 1241, 1310, 1412, 1421, 1619, 1904
Hpy8I	GTNNAC	5 cut(s)	1345, 1682, 1762, 1886, 1984
Hpy99I	CGWCG	1 cut(s)	2101
HpyCH4III	ACNGT	5 cut(s)	363, 590, 767, 1781, 1883
HpyCH4IV	ACGT	2 cut(s)	1595, 2096
HpyF3I	CTNAG	9 cut(s)	990, 1022, 1491, 1705, 1851, 1996, 2183, 2233, 2367
HpySE526I	ACGT	2 cut(s)	1595, 2096
HspAI	GCGC	2 cut(s)	292, 301
KroI	GCCGGC	1 cut(s)	297
KroNI	GCCGGC	1 cut(s)	299
Ksp22I	TGATCA	1 cut(s)	244
Kzo9I	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
LguI	GCTCTTC	3 cut(s)	20, 807, 1158
LmnI	GCTCC	2 cut(s)	631, 1183
Lsp1109I	GCAGC	6 cut(s)	31, 722, 853, 856, 1111, 2332
LweI	GCATC	6 cut(s)	137, 700, 935, 976, 1167, 2144
MaeI	CTAG	4 cut(s)	161, 806, 1688, 2408
MaeII	ACGT	2 cut(s)	1595, 2096
MaeIII	GTNAC	3 cut(s)	421, 1262, 1409
MalI	GATC	7 cut(s)	246, 1016, 1095, 1406, 1566, 1581, 1870
MbiI	CCGCTC	1 cut(s)	1186
MboI	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
MfeI	CAATTG	3 cut(s)	930, 1947, 2312
MflI	RGATCY	2 cut(s)	1014, 1579
MhlI	GDGCHC	3 cut(s)	108, 1255, 1764
MlsI	TGGCCA	1 cut(s)	2066
MluNI	TGGCCA	1 cut(s)	2066
MlyI	GAGTC	2 cut(s)	221, 1259
MmeI	TCCRAC	2 cut(s)	69, 653
Mox20I	TGGCCA	1 cut(s)	2066
Mph1103I	ATGCAT	1 cut(s)	1116
MreI	CGCCGGCG	1 cut(s)	297
MroNI	GCCGGC	1 cut(s)	297
MroXI	GAANNNNTTC	2 cut(s)	2125, 2259
MscI	TGGCCA	1 cut(s)	2066
MseI	TTAA	4 cut(s)	1388, 1592, 1755, 2195
MslI	CAYNNNNRTG	5 cut(s)	72, 99, 896, 1158, 1896
Msp20I	TGGCCA	1 cut(s)	2066
MspA1I	CMGCKG	2 cut(s)	22, 2266
MspI	CCGG	1 cut(s)	298
MspR9I	CCNGG	3 cut(s)	1478, 2325, 2342
MunI	CAATTG	3 cut(s)	930, 1947, 2312
Mva1269I	GAATGC	2 cut(s)	1153, 1492
MvaI	CCWGG	3 cut(s)	1478, 2325, 2342
NaeI	GCCGGC	1 cut(s)	299
NcoI	CCATGG	1 cut(s)	891
NdeI	CATATG	1 cut(s)	523
NdeII	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
NgoMIV	GCCGGC	1 cut(s)	297
NlaIV	GGNNCC	7 cut(s)	310, 1252, 1253, 1747, 1914, 2007, 2322
NmuCI	GTSAC	2 cut(s)	1262, 1409
NsiI	ATGCAT	1 cut(s)	1116
NspI	RCATGY	5 cut(s)	683, 1114, 1343, 1351, 1927
NspV	TTCGAA	1 cut(s)	1334
OliI	CACNNNNGTG	1 cut(s)	1896
PaeI	GCATGC	1 cut(s)	1927
PagI	TCATGA	1 cut(s)	1618
PciI	ACATGT	1 cut(s)	679
PciSI	GCTCTTC	3 cut(s)	20, 807, 1158
PctI	GAATGC	2 cut(s)	1153, 1492
PdiI	GCCGGC	1 cut(s)	299
PdmI	GAANNNNTTC	2 cut(s)	2125, 2259
PfeI	GAWTC	2 cut(s)	368, 2305
PflMI	CCANNNNNTGG	2 cut(s)	379, 458
PleI	GAGTC	2 cut(s)	220, 1259
PpsI	GAGTC	2 cut(s)	220, 1259
PscI	ACATGT	1 cut(s)	679
Psp6I	CCWGG	3 cut(s)	1476, 2323, 2340
PspFI	CCCAGC	1 cut(s)	170
PspGI	CCWGG	3 cut(s)	1476, 2323, 2340
PspN4I	GGNNCC	7 cut(s)	310, 1252, 1253, 1747, 1914, 2007, 2322
PspOMI	GGGCCC	1 cut(s)	1251
PspPI	GGNCC	8 cut(s)	91, 309, 386, 1251, 1252, 1474, 1901, 2239
PstI	CTGCAG	2 cut(s)	2041, 2140
PstNI	CAGNNNCTG	1 cut(s)	638
PsuI	RGATCY	2 cut(s)	1014, 1579
PvuII	CAGCTG	2 cut(s)	22, 2266
RsaI	GTAC	3 cut(s)	360, 829, 2425
RsaNI	GTAC	3 cut(s)	359, 828, 2424
RseI	CAYNNNNRTG	5 cut(s)	72, 99, 896, 1158, 1896
SapI	GCTCTTC	3 cut(s)	20, 807, 1158
SaqAI	TTAA	4 cut(s)	1388, 1592, 1755, 2195
Sau3AI	GATC	7 cut(s)	244, 1014, 1093, 1404, 1564, 1579, 1868
Sau96I	GGNCC	8 cut(s)	91, 309, 386, 1251, 1252, 1474, 1901, 2239
SchI	GAGTC	2 cut(s)	221, 1259
ScrFI	CCNGG	3 cut(s)	1478, 2325, 2342
SduI	GDGCHC	3 cut(s)	108, 1255, 1764
SfaNI	GCATC	6 cut(s)	137, 700, 935, 976, 1167, 2144
SfcI	CTRYAG	3 cut(s)	1069, 2037, 2136
SfuI	TTCGAA	1 cut(s)	1334
SgrAI	CRCCGGYG	1 cut(s)	297
SinI	GGWCC	4 cut(s)	91, 386, 1474, 1901
SmiMI	CAYNNNNRTG	5 cut(s)	72, 99, 896, 1158, 1896
SmlI	CTYRAG	3 cut(s)	346, 665, 1806
SmoI	CTYRAG	3 cut(s)	346, 665, 1806
SphI	GCATGC	1 cut(s)	1927
SspMI	CTAG	4 cut(s)	161, 806, 1688, 2408
StyD4I	CCNGG	3 cut(s)	1476, 2323, 2340
StyI	CCWWGG	2 cut(s)	891, 1287
TaaI	ACNGT	5 cut(s)	363, 590, 767, 1781, 1883
TaiI	ACGT	2 cut(s)	1598, 2099
TaqI	TCGA	6 cut(s)	42, 83, 271, 1175, 1334, 1871
TauI	GCSGC	5 cut(s)	297, 474, 477, 881, 2356
TfiI	GAWTC	2 cut(s)	368, 2305
Tru1I	TTAA	4 cut(s)	1388, 1592, 1755, 2195
Tru9I	TTAA	4 cut(s)	1388, 1592, 1755, 2195
TscAI	CASTG	4 cut(s)	643, 1372, 1786, 2241
TseFI	GTSAC	2 cut(s)	1262, 1409
TseI	GCWGC	6 cut(s)	19, 735, 866, 869, 1124, 2345
Tsp45I	GTSAC	2 cut(s)	1262, 1409
TspGWI	ACGGA	2 cut(s)	2018, 2333
TspRI	CASTG	4 cut(s)	643, 1372, 1786, 2241
Van91I	CCANNNNNTGG	2 cut(s)	379, 458
VneI	GTGCAC	1 cut(s)	1760
VpaK11BI	GGWCC	4 cut(s)	91, 386, 1474, 1901
XapI	RAATTY	6 cut(s)	226, 727, 1840, 1933, 2026, 2125
XceI	RCATGY	5 cut(s)	683, 1114, 1343, 1351, 1927
XcmI	CCANNNNNNNNNTGG	1 cut(s)	380
XmnI	GAANNNNTTC	2 cut(s)	2125, 2259
XspI	CTAG	4 cut(s)	161, 806, 1688, 2408
Zsp2I	ATGCAT	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.