Rmu_sc0004080.1_g000016
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004080.1
Physical Location & Seq
Reverse (-)
64527 .. 65172
646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004080.1_g000016.1.cds

Sequence Viewer

Length: 384 bp
atgaaacgtgaggatgcaactgatgttcacgattttggagtaatattgctggaaatgatcaaggggagaccagtcgagtctatgactcaagtgggagttttgaaagatcagctacaagtggttattgcagctgatgatgcagctcgaagaagcatggttgatccacgagttaagcagacatgcttggatcaatcattgaagacaatgatggaaatttgcgtcaggtgtctgcacaacgagccggcagatagaccttctttcgatgatattctgtggaacttgcagtatgctgcacaggttcaggatgcatggcagcagggagaatgcttgagcagtgatggttctccagtttcacctccacaacctccacgcctcaccttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

127

Amino Acids

14.27

Weight (kDa)

4.76

Isoelectric Point (pI)

70.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 155, 195
AcsI RAATTY 1 cut(s) 213
AgsI TTSAA 2 cut(s) 103, 199
AluBI AGCT 3 cut(s) 112, 131, 143
AluI AGCT 3 cut(s) 112, 131, 143
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 2 cut(s) 155, 195
ApeKI GCWGC 4 cut(s) 128, 140, 290, 313
ApoI RAATTY 1 cut(s) 213
AsuHPI GGTGA 2 cut(s) 345, 367
BauI CACGAG 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 206
BbvI GCAGC 4 cut(s) 140, 152, 277, 325
BccI CCATC 2 cut(s) 202, 332
BclI TGATCA 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 61
BisI GCNGC 4 cut(s) 129, 141, 291, 314
BlsI GCNGC 4 cut(s) 130, 142, 292, 315
BmsI GCATC 3 cut(s) 4, 127, 295
BpiI GAAGAC 1 cut(s) 206
BpmI CTGGAG 1 cut(s) 330
BpuEI CTTGAG 2 cut(s) 72, 349
BsaI GGTCTC 1 cut(s) 61
Bse118I RCCGGY 1 cut(s) 241
Bse1I ACTGG 2 cut(s) 71, 347
BseGI GGATG 2 cut(s) 19, 310
BseNI ACTGG 2 cut(s) 71, 347
BseXI GCAGC 4 cut(s) 140, 152, 277, 325
BsgI GTGCAG 2 cut(s) 215, 276
BsiSI CCGG 1 cut(s) 242
BsmAI GTCTC 1 cut(s) 61
BsmI GAATGC 1 cut(s) 329
Bso31I GGTCTC 1 cut(s) 61
Bsp143I GATC 4 cut(s) 57, 106, 160, 187
BspPI GGATC 2 cut(s) 155, 195
BspTNI GGTCTC 1 cut(s) 61
BsrFI RCCGGY 1 cut(s) 241
BsrI ACTGG 2 cut(s) 71, 347
BssAI RCCGGY 1 cut(s) 241
BssMI GATC 4 cut(s) 57, 106, 160, 187
BssSI CACGAG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 243
BstF5I GGATG 2 cut(s) 19, 310
BstKTI GATC 4 cut(s) 60, 109, 163, 190
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 4 cut(s) 57, 106, 160, 187
BstMWI GCNNNNNNNGC 2 cut(s) 137, 238
BstNSI RCATGY 1 cut(s) 183
BstV1I GCAGC 4 cut(s) 140, 152, 277, 325
BstV2I GAAGAC 1 cut(s) 206
BtsCI GGATG 2 cut(s) 19, 310
BtsI GCAGTG 1 cut(s) 340
BtsIMutI CAGTG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 243
Cfr10I RCCGGY 1 cut(s) 241
CseI GACGC 1 cut(s) 208
CviAII CATG 3 cut(s) 154, 180, 309
CviJI RGCY 4 cut(s) 112, 131, 143, 241
CviKI_1 RGCY 4 cut(s) 112, 131, 143, 241
DpnI GATC 4 cut(s) 59, 108, 162, 189
DpnII GATC 4 cut(s) 57, 106, 160, 187
Eco31I GGTCTC 1 cut(s) 61
EcoT22I ATGCAT 1 cut(s) 310
FaeI CATG 3 cut(s) 157, 183, 312
FaiI YATR 5 cut(s) 83, 155, 181, 288, 310
FatI CATG 3 cut(s) 153, 179, 308
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 4 cut(s) 129, 141, 291, 314
FokI GGATG 2 cut(s) 26, 317
Fsp4HI GCNGC 4 cut(s) 129, 141, 291, 314
GluI GCNGC 4 cut(s) 129, 141, 291, 314
GsuI CTGGAG 1 cut(s) 330
HapII CCGG 1 cut(s) 242
HgaI GACGC 1 cut(s) 208
Hin1II CATG 3 cut(s) 157, 183, 312
HinfI GANTC 2 cut(s) 77, 85
HpaII CCGG 1 cut(s) 242
HphI GGTGA 2 cut(s) 345, 367
Hpy166II GTNNAC 1 cut(s) 28
Hpy188III TCNNGA 2 cut(s) 29, 302
Hpy8I GTNNAC 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 264
HpyCH4IV ACGT 1 cut(s) 7
HpyCH4V TGCA 7 cut(s) 17, 128, 140, 232, 283, 293, 308
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 238
HpySE526I ACGT 1 cut(s) 7
Hsp92II CATG 3 cut(s) 157, 183, 312
KroI GCCGGC 1 cut(s) 241
KroNI GCCGGC 1 cut(s) 243
Ksp22I TGATCA 1 cut(s) 57
Kzo9I GATC 4 cut(s) 57, 106, 160, 187
LpnPI CCDG 8 cut(s) 35, 84, 208, 255, 281, 287, 302, 360
Lsp1109I GCAGC 4 cut(s) 140, 152, 277, 325
LweI GCATC 3 cut(s) 4, 127, 295
MaeII ACGT 1 cut(s) 7
MalI GATC 4 cut(s) 59, 108, 162, 189
MboI GATC 4 cut(s) 57, 106, 160, 187
MboII GAAGA 2 cut(s) 159, 211
MluCI AATT 1 cut(s) 213
MlyI GAGTC 2 cut(s) 79, 86
MnlI CCTC 4 cut(s) 4, 366, 375, 383
Mph1103I ATGCAT 1 cut(s) 310
MroNI GCCGGC 1 cut(s) 241
MseI TTAA 1 cut(s) 171
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 1 cut(s) 242
Mva1269I GAATGC 1 cut(s) 329
MwoI GCNNNNNNNGC 2 cut(s) 137, 238
NaeI GCCGGC 1 cut(s) 243
NdeII GATC 4 cut(s) 57, 106, 160, 187
NgoMIV GCCGGC 1 cut(s) 241
NlaIII CATG 3 cut(s) 157, 183, 312
NsiI ATGCAT 1 cut(s) 310
NspI RCATGY 1 cut(s) 183
PctI GAATGC 1 cut(s) 329
PdiI GCCGGC 1 cut(s) 243
PkrI GCNGC 4 cut(s) 130, 142, 292, 315
PleI GAGTC 2 cut(s) 79, 85
PpsI GAGTC 2 cut(s) 79, 85
PvuII CAGCTG 1 cut(s) 131
SaqAI TTAA 1 cut(s) 171
SatI GCNGC 4 cut(s) 129, 141, 291, 314
Sau3AI GATC 4 cut(s) 57, 106, 160, 187
SchI GAGTC 2 cut(s) 79, 86
SfaNI GCATC 3 cut(s) 4, 127, 295
SmlI CTYRAG 2 cut(s) 87, 328
SmoI CTYRAG 2 cut(s) 87, 328
Sse9I AATT 1 cut(s) 213
SspI AATATT 1 cut(s) 45
TaiI ACGT 1 cut(s) 10
TaqI TCGA 3 cut(s) 75, 145, 261
TasI AATT 1 cut(s) 213
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 1 cut(s) 340
TseI GCWGC 4 cut(s) 128, 140, 290, 313
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 340
XapI RAATTY 1 cut(s) 213
XceI RCATGY 1 cut(s) 183
Zsp2I ATGCAT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.