Rmu_sc0005397.1_g000001

Plasma membrane ATPase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005397.1
Physical Location & Seq
Forward (+)
1 .. 3264
3264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005397.1_g000001.1.cds

Sequence Viewer

Length: 1383 bp
gaagtacctgctggaaccaaagacagtcctggtggaccttgggagtttgttggtcttctacctttgtttgatccaccacgtcacgacagtgctgaaactattagaagagctctagatcttggtgtgagtgttaagatgattacaggcgatcaactggcaattgccaaagagacagggagacgacttgggatgggctcaaacatgtatccatcatcttcattgcttggtgaaaataagaatggcttagatgcaagtctacaaattgatgaactcattgagaatgctgatggttttgctggtgtctttccagagcataaatatgagatcgttcagcgattacaaattaagaagcacatagttggaatgaccggtgatggagttaatgatgcacctgccttgaagaaagcagacataggaattgctgtggcagatgccacagatgctgctcgtagtgcatctgatatagtactgacagagcctggattgagtgttattattagtgctgttctgacaagccgtgcaatctttcaaagaatgaagaactacacacttggtttcttgttgctaactgcattctggcgatttgatttccctccttttatggtcctcatcatagccattcttaatgacgggcctaaatataattgtgagcgctcatattctagacttgatgacaatgaagaagttattaacatatctctctgtgtctctcagaaacacttccatctagacctggacttcaagaaactcgctgatctcaatgagtcgagttatacagagacactgaatggccagctagcatctgttgtgtaccttcaagttagcaccatcagccaggctctaatttttgtaactcgctccagaggttggtcattcatggaaagacctggtcttcttcttgttggtgccttcatagttgctcaaatggttgcaacagtaatatctgctcaggcaacatggaaatttgctcaaattcatagcgttggctggggttggactggagctgtatggatttacaacattataatctatatgcttcttgatcctatcaagttttttgtgcgatatgcactcagtgggagggcctggagtttggtactgaacaaaaggacggctttcaccacccaaaaggactttggtagggaagctcgtgaggctgcatgggcaacagaacagcgcacacttcatggcctcccaactatggacaaaagtatcttccatgagaggcacacattcagggatgttagcatgatggctgaagaagcccgacgacgtgcagagattgcaagactaagggaaattcacactctcaaagggaaggtagagtcctttgcaaagctaaggggtttggacattgacgtcaatccacattacacagtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

51.34

Weight (kDa)

6.94

Isoelectric Point (pI)

39.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1025
AarI CACCTGC 1 cut(s) 400
AasI GACNNNNNNGTC 1 cut(s) 1358
AatII GACGTC 1 cut(s) 1362
Acc36I ACCTGC 2 cut(s) 16, 400
AccB1I GGYRCC 1 cut(s) 905
AccB7I CCANNNNNTGG 1 cut(s) 867
AccI GTMKAC 1 cut(s) 256
AclWI GGATC 2 cut(s) 65, 1037
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 3 cut(s) 962, 972, 1299
AcuI CTGAAG 1 cut(s) 1278
AcyI GRCGYC 1 cut(s) 1359
AdeI CACNNNGTG 1 cut(s) 1076
AfaI GTAC 4 cut(s) 6, 468, 812, 1098
AfeI AGCGCT 1 cut(s) 653
AfiI CCNNNNNNNGG 2 cut(s) 867, 1201
AflIII ACRYGT 1 cut(s) 201
AgeI ACCGGT 1 cut(s) 368
AgsI TTSAA 4 cut(s) 400, 530, 742, 818
AjiI CACGTC 2 cut(s) 80, 1274
AjnI CCWGG 6 cut(s) 28, 478, 732, 834, 886, 1085
AleI CACNNNNGTG 1 cut(s) 87
AluBI AGCT 5 cut(s) 110, 796, 1004, 1148, 1339
AluI AGCT 5 cut(s) 110, 796, 1004, 1148, 1339
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 4 cut(s) 164, 172, 712, 773
AlwI GGATC 2 cut(s) 65, 1037
AlwNI CAGNNNCTG 2 cut(s) 443, 479
Aor51HI AGCGCT 1 cut(s) 653
AoxI GGCC 4 cut(s) 632, 790, 1083, 1189
ApeKI GCWGC 2 cut(s) 443, 1157
ApoI RAATTY 3 cut(s) 962, 972, 1299
AsiGI ACCGGT 1 cut(s) 368
Asp700I GAANNNNTTC 1 cut(s) 719
AspLEI GCGC 2 cut(s) 654, 1179
AspS9I GGNCC 4 cut(s) 35, 604, 632, 1083
AsuHPI GGTGA 3 cut(s) 239, 383, 1111
AsuNHI GCTAGC 1 cut(s) 796
AvaII GGWCC 2 cut(s) 35, 604
BaeI ACNNNNGTAYC 2 cut(s) 1195, 1228
BalI TGGCCA 1 cut(s) 792
BanI GGYRCC 1 cut(s) 905
BanII GRGCYC 2 cut(s) 112, 197
BauI CACGAG 1 cut(s) 1149
BbsI GAAGAC 2 cut(s) 47, 884
Bbv12I GWGCWC 1 cut(s) 112
BbvI GCAGC 2 cut(s) 430, 1144
BccI CCATC 7 cut(s) 184, 217, 281, 368, 732, 836, 1246
BceAI ACGGC 2 cut(s) 501, 1128
BciT130I CCWGG 6 cut(s) 30, 480, 734, 836, 888, 1087
BciVI GTATCC 1 cut(s) 216
BcoDI GTCTC 4 cut(s) 164, 172, 712, 773
BfaI CTAG 4 cut(s) 113, 663, 728, 797
BfoI RGCGCY 1 cut(s) 655
BfuAI ACCTGC 2 cut(s) 16, 400
BfuI GTATCC 1 cut(s) 216
BglII AGATCT 1 cut(s) 115
BisI GCNGC 2 cut(s) 444, 1158
BlsI GCNGC 2 cut(s) 445, 1159
BmcAI AGTACT 1 cut(s) 468
Bme1390I CCNGG 6 cut(s) 30, 480, 734, 836, 888, 1087
Bme18I GGWCC 2 cut(s) 35, 604
BmgBI CACGTC 2 cut(s) 80, 1274
BmgT120I GGNCC 4 cut(s) 35, 604, 632, 1083
BmiI GGNNCC 2 cut(s) 16, 907
BmrFI CCNGG 6 cut(s) 30, 480, 734, 836, 888, 1087
BmsI GCATC 6 cut(s) 238, 376, 421, 430, 464, 809
BmtI GCTAGC 1 cut(s) 800
BpiI GAAGAC 2 cut(s) 47, 884
BpmI CTGGAG 3 cut(s) 844, 1020, 1108
Bpu10I CCTNAGC 2 cut(s) 948, 1340
BsaHI GRCGYC 1 cut(s) 1359
BsaJI CCNNGG 1 cut(s) 38
BsaWI WCCGGW 1 cut(s) 368
Bsc4I CCNNNNNNNGG 2 cut(s) 867, 1201
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 2 cut(s) 159, 1003
Bse3DI GCAATG 1 cut(s) 218
BseBI CCWGG 6 cut(s) 30, 480, 734, 836, 888, 1087
BseDI CCNNGG 1 cut(s) 38
BseGI GGATG 2 cut(s) 195, 1246
BseLI CCNNNNNNNGG 2 cut(s) 867, 1201
BseMI GCAATG 1 cut(s) 218
BseMII CTCAG 3 cut(s) 725, 962, 1087
BseNI ACTGG 2 cut(s) 159, 1003
BseXI GCAGC 2 cut(s) 430, 1144
BseYI CCCAGC 1 cut(s) 987
BsgI GTGCAG 1 cut(s) 1296
BshFI GGCC 4 cut(s) 634, 792, 1085, 1191
BshNI GGYRCC 1 cut(s) 905
BshTI ACCGGT 1 cut(s) 368
BsiHKAI GWGCWC 1 cut(s) 112
BsiSI CCGG 1 cut(s) 369
BslI CCNNNNNNNGG 2 cut(s) 867, 1201
BsmAI GTCTC 4 cut(s) 164, 172, 712, 773
BsmBI CGTCTC 1 cut(s) 172
BsmI GAATGC 2 cut(s) 286, 572
BsnI GGCC 4 cut(s) 634, 792, 1085, 1191
Bsp1286I GDGCHC 2 cut(s) 112, 197
Bsp143I GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
BspANI GGCC 4 cut(s) 634, 792, 1085, 1191
BspCNI CTCAG 3 cut(s) 724, 961, 1086
BspLI GGNNCC 2 cut(s) 16, 907
BspMI ACCTGC 2 cut(s) 16, 400
BspOI GCTAGC 1 cut(s) 800
BspPI GGATC 2 cut(s) 65, 1037
BspQI GCTCTTC 1 cut(s) 100
BspT107I GGYRCC 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 218
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 2 cut(s) 159, 1003
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 1 cut(s) 38
BssMI GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
BssNI GRCGYC 1 cut(s) 1359
BssSI CACGAG 1 cut(s) 1149
BssT1I CCWWGG 1 cut(s) 38
Bst2BI CACGAG 1 cut(s) 1149
Bst2UI CCWGG 6 cut(s) 30, 480, 734, 836, 888, 1087
Bst4CI ACNGT 4 cut(s) 26, 89, 937, 1378
Bst6I CTCTTC 1 cut(s) 100
BstACI GRCGYC 1 cut(s) 1359
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstC8I GCNNGC 2 cut(s) 794, 798
BstDEI CTNAG 6 cut(s) 244, 711, 948, 1073, 1292, 1340
BstF5I GGATG 2 cut(s) 195, 1246
BstH2I RGCGCY 1 cut(s) 655
BstHHI GCGC 2 cut(s) 654, 1179
BstKTI GATC 6 cut(s) 73, 118, 151, 327, 757, 1045
BstMAI GTCTC 4 cut(s) 164, 172, 712, 773
BstMBI GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
BstMWI GCNNNNNNNGC 7 cut(s) 440, 452, 831, 1154, 1163, 1262, 1283
BstNI CCWGG 6 cut(s) 30, 480, 734, 836, 888, 1087
BstNSI RCATGY 1 cut(s) 205
BstSCI CCNGG 6 cut(s) 28, 478, 732, 834, 886, 1085
BstV1I GCAGC 2 cut(s) 430, 1144
BstV2I GAAGAC 2 cut(s) 47, 884
BstX2I RGATCY 1 cut(s) 115
BstYI RGATCY 1 cut(s) 115
BsuI GTATCC 1 cut(s) 216
BsuRI GGCC 4 cut(s) 634, 792, 1085, 1191
BtrI CACGTC 2 cut(s) 80, 1274
BtsCI GGATG 2 cut(s) 195, 1246
BtsIMutI CAGTG 3 cut(s) 94, 782, 1081
BveI ACCTGC 2 cut(s) 16, 400
Cac8I GCNNGC 2 cut(s) 794, 798
CaiI CAGNNNCTG 2 cut(s) 443, 479
CfoI GCGC 2 cut(s) 654, 1179
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 4 cut(s) 35, 604, 632, 1083
CsiI ACCWGGT 1 cut(s) 886
Csp6I GTAC 4 cut(s) 5, 467, 811, 1097
CspAI ACCGGT 1 cut(s) 368
CviAII CATG 7 cut(s) 202, 877, 957, 1161, 1187, 1220, 1249
CviQI GTAC 4 cut(s) 5, 467, 811, 1097
DdeI CTNAG 6 cut(s) 244, 711, 948, 1073, 1292, 1340
DpnI GATC 6 cut(s) 72, 117, 150, 326, 756, 1044
DpnII GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
DraIII CACNNNGTG 1 cut(s) 1076
DrdI GACNNNNNNGTC 1 cut(s) 1358
DseDI GACNNNNNNGTC 1 cut(s) 1358
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 1 cut(s) 100
EarI CTCTTC 1 cut(s) 100
Ecl136II GAGCTC 1 cut(s) 110
Eco130I CCWWGG 1 cut(s) 38
Eco24I GRGCYC 2 cut(s) 112, 197
Eco47I GGWCC 2 cut(s) 35, 604
Eco47III AGCGCT 1 cut(s) 653
Eco53kI GAGCTC 1 cut(s) 110
Eco57I CTGAAG 1 cut(s) 1278
EcoICRI GAGCTC 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 1083
EcoRII CCWGG 6 cut(s) 28, 478, 732, 834, 886, 1085
EcoT14I CCWWGG 1 cut(s) 38
EcoT38I GRGCYC 2 cut(s) 112, 197
ErhI CCWWGG 1 cut(s) 38
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 7 cut(s) 205, 880, 960, 1164, 1190, 1223, 1252
FalI AAGNNNNNCTT 4 cut(s) 227, 259, 1099, 1131
FatI CATG 7 cut(s) 201, 876, 956, 1160, 1186, 1219, 1248
FblI GTMKAC 1 cut(s) 256
Fnu4HI GCNGC 2 cut(s) 444, 1158
FokI GGATG 2 cut(s) 202, 1253
FriOI GRGCYC 2 cut(s) 112, 197
Fsp4HI GCNGC 2 cut(s) 444, 1158
FspBI CTAG 4 cut(s) 113, 663, 728, 797
GlaI GCGC 2 cut(s) 653, 1178
GluI GCNGC 2 cut(s) 444, 1158
GsaI CCCAGC 1 cut(s) 991
GsuI CTGGAG 3 cut(s) 844, 1020, 1108
HaeII RGCGCY 1 cut(s) 655
HaeIII GGCC 4 cut(s) 634, 792, 1085, 1191
HapII CCGG 1 cut(s) 369
HhaI GCGC 2 cut(s) 654, 1179
Hin1I GRCGYC 1 cut(s) 1359
Hin1II CATG 7 cut(s) 205, 880, 960, 1164, 1190, 1223, 1252
Hin6I GCGC 2 cut(s) 652, 1177
HinP1I GCGC 2 cut(s) 652, 1177
HinfI GANTC 2 cut(s) 764, 1325
HpaII CCGG 1 cut(s) 369
HphI GGTGA 3 cut(s) 239, 383, 1111
Hpy166II GTNNAC 3 cut(s) 35, 257, 811
Hpy188I TCNGA 3 cut(s) 460, 510, 714
Hpy188III TCNNGA 9 cut(s) 83, 113, 308, 663, 728, 742, 861, 1040, 1151
Hpy8I GTNNAC 3 cut(s) 35, 257, 811
Hpy99I CGWCG 2 cut(s) 1272, 1275
HpyAV CCTTC 3 cut(s) 824, 919, 1312
HpyCH4III ACNGT 4 cut(s) 26, 89, 937, 1378
HpyCH4IV ACGT 3 cut(s) 79, 1273, 1359
HpyF10VI GCNNNNNNNGC 7 cut(s) 440, 452, 831, 1154, 1163, 1262, 1283
HpyF3I CTNAG 6 cut(s) 244, 711, 948, 1073, 1292, 1340
HpySE526I ACGT 3 cut(s) 79, 1273, 1359
Hsp92I GRCGYC 1 cut(s) 1359
Hsp92II CATG 7 cut(s) 205, 880, 960, 1164, 1190, 1223, 1252
HspAI GCGC 2 cut(s) 652, 1177
Kzo9I GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
LguI GCTCTTC 1 cut(s) 100
LmnI GCTCC 2 cut(s) 863, 1001
Lsp1109I GCAGC 2 cut(s) 430, 1144
LweI GCATC 6 cut(s) 238, 376, 421, 430, 464, 809
MabI ACCWGGT 1 cut(s) 886
MaeI CTAG 4 cut(s) 113, 663, 728, 797
MaeII ACGT 3 cut(s) 79, 1273, 1359
MaeIII GTNAC 2 cut(s) 80, 850
MalI GATC 6 cut(s) 72, 117, 150, 326, 756, 1044
MboI GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
MfeI CAATTG 1 cut(s) 159
MflI RGATCY 1 cut(s) 115
MhlI GDGCHC 2 cut(s) 112, 197
MlsI TGGCCA 1 cut(s) 792
MluCI AATT 9 cut(s) 159, 261, 342, 417, 643, 843, 962, 972, 1299
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 2 cut(s) 773, 1334
MmeI TCCRAC 2 cut(s) 340, 974
MnlI CCTC 7 cut(s) 603, 617, 857, 1074, 1147, 1202, 1218
Mox20I TGGCCA 1 cut(s) 792
MroXI GAANNNNTTC 1 cut(s) 719
MscI TGGCCA 1 cut(s) 792
MseI TTAA 5 cut(s) 132, 345, 381, 624, 690
MslI CAYNNNNRTG 2 cut(s) 87, 318
Msp20I TGGCCA 1 cut(s) 792
MspI CCGG 1 cut(s) 369
MspR9I CCNGG 6 cut(s) 30, 480, 734, 836, 888, 1087
MunI CAATTG 1 cut(s) 159
Mva1269I GAATGC 2 cut(s) 286, 572
MvaI CCWGG 6 cut(s) 30, 480, 734, 836, 888, 1087
MwoI GCNNNNNNNGC 7 cut(s) 440, 452, 831, 1154, 1163, 1262, 1283
NdeII GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
NheI GCTAGC 1 cut(s) 796
NlaIII CATG 7 cut(s) 205, 880, 960, 1164, 1190, 1223, 1252
NlaIV GGNNCC 2 cut(s) 16, 907
NmuCI GTSAC 1 cut(s) 80
NspI RCATGY 1 cut(s) 205
OliI CACNNNNGTG 1 cut(s) 87
PaqCI CACCTGC 1 cut(s) 400
PciI ACATGT 1 cut(s) 201
PciSI GCTCTTC 1 cut(s) 100
PctI GAATGC 2 cut(s) 286, 572
PdmI GAANNNNTTC 1 cut(s) 719
PflFI GACNNNGTC 1 cut(s) 888
PflMI CCANNNNNTGG 1 cut(s) 867
PinAI ACCGGT 1 cut(s) 368
PkrI GCNGC 2 cut(s) 445, 1159
PleI GAGTC 2 cut(s) 772, 1333
PpsI GAGTC 2 cut(s) 772, 1333
PscI ACATGT 1 cut(s) 201
PsiI TTATAA 1 cut(s) 1025
Psp124BI GAGCTC 1 cut(s) 112
Psp6I CCWGG 6 cut(s) 28, 478, 732, 834, 886, 1085
PspFI CCCAGC 1 cut(s) 987
PspGI CCWGG 6 cut(s) 28, 478, 732, 834, 886, 1085
PspN4I GGNNCC 2 cut(s) 16, 907
PspPI GGNCC 4 cut(s) 35, 604, 632, 1083
PstNI CAGNNNCTG 2 cut(s) 443, 479
PsuI RGATCY 1 cut(s) 115
PsyI GACNNNGTC 1 cut(s) 888
RsaI GTAC 4 cut(s) 6, 468, 812, 1098
RsaNI GTAC 4 cut(s) 5, 467, 811, 1097
RseI CAYNNNNRTG 2 cut(s) 87, 318
SacI GAGCTC 1 cut(s) 112
SapI GCTCTTC 1 cut(s) 100
SaqAI TTAA 5 cut(s) 132, 345, 381, 624, 690
SatI GCNGC 2 cut(s) 444, 1158
Sau3AI GATC 6 cut(s) 70, 115, 148, 324, 754, 1042
Sau96I GGNCC 4 cut(s) 35, 604, 632, 1083
ScaI AGTACT 1 cut(s) 468
SchI GAGTC 2 cut(s) 773, 1334
ScrFI CCNGG 6 cut(s) 30, 480, 734, 836, 888, 1087
SduI GDGCHC 2 cut(s) 112, 197
SexAI ACCWGGT 1 cut(s) 886
SfaNI GCATC 6 cut(s) 238, 376, 421, 430, 464, 809
SinI GGWCC 2 cut(s) 35, 604
SmiMI CAYNNNNRTG 2 cut(s) 87, 318
Sse9I AATT 9 cut(s) 159, 261, 342, 417, 643, 843, 962, 972, 1299
SspMI CTAG 4 cut(s) 113, 663, 728, 797
SstI GAGCTC 1 cut(s) 112
StyD4I CCNGG 6 cut(s) 28, 478, 732, 834, 886, 1085
StyI CCWWGG 1 cut(s) 38
TaaI ACNGT 4 cut(s) 26, 89, 937, 1378
TaiI ACGT 3 cut(s) 82, 1276, 1362
TaqI TCGA 1 cut(s) 767
TasI AATT 9 cut(s) 159, 261, 342, 417, 643, 843, 962, 972, 1299
TatI WGTACW 1 cut(s) 466
Tru1I TTAA 5 cut(s) 132, 345, 381, 624, 690
Tru9I TTAA 5 cut(s) 132, 345, 381, 624, 690
TscAI CASTG 3 cut(s) 94, 789, 1081
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 2 cut(s) 443, 1157
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 8 cut(s) 207, 282, 551, 693, 865, 901, 965, 1175
TspRI CASTG 3 cut(s) 94, 789, 1081
Tth111I GACNNNGTC 1 cut(s) 888
Van91I CCANNNNNTGG 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 35, 604
XapI RAATTY 3 cut(s) 962, 972, 1299
XbaI TCTAGA 3 cut(s) 112, 662, 727
XceI RCATGY 1 cut(s) 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 1133
XmiI GTMKAC 1 cut(s) 256
XmnI GAANNNNTTC 1 cut(s) 719
XspI CTAG 4 cut(s) 113, 663, 728, 797
ZraI GACGTC 1 cut(s) 1360
ZrmI AGTACT 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.