Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006811.1

Orthogroup ID

OG0006276

Physical Location & Seq

Genomic Coordinates Reverse (-)

46382 .. 52294

Gene Structure 5913 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006811.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

atggtgaacgttcccaagactaagaagacctactgcaagaacaaggcgtgcaagaagcacaccttgcacaaggttacacagtacaagaagggcaaggacagtcttgctgctcagggaaagcgtcgttacgatcgcaagcagtctggttatggaggtcagaccaagccagtctttcacaagaaggccaagactaccaagaagattgttctaaggctccaatgccagggatgcaagcatgtttctcagcatccaatcaagaggtgcaagcactttgagattgaatttgaaattagacttgaaatacagctcatctctggtacttgtgcatctgtttcagtgtgctcatcagcaccgaggggcgtggggcgtgggccctctctctcgctctccgatcccgccgtcgagtctccgcctttcattcaattccggctgtgtttgtcttctatttcggagtgtgtttttactatgattgccaccgaaacaaccatgttatcgggcagcaagctgaagatcaaattttcctgcaaaagaatagaagttgagcccgatgacgggaaagtgtcgcgtgactttgggaatacagtgtcagccaggggtttgagctctgttgcacaaacttctcttccgggtggtaagaagaggggaccctcaggggacattgaggctccgagagagaagaagttgaagatggatcgtaaagtgaagggtcagtgctcaacaattctgaattcactgatttctcataaggactcttgggccttcagaaaaccagttgatcctgttgagctacaaattcctgattattttgatgtcatctcttctcccatggatttgggaacgatcaaatcaaagctggacagaaatttgtattttggcgctggagagttcgcagctgatgtcagattgaccttttctaatgccatgctctataatcccccgggcaatccttttcatcagatggcaaaagacctaaatacaaagtttgagatgaaatggagacaagtggatgtgaagtggagtcagggaagctcgaaggttgatatggggaaaaattcgtgtgggcaagttaagaaaataactgaaataactgatacgagactgaattcccataaaactactctgtttcagagtgtatcagtgtccaaaagcccagtcctcagcagagagaatgttggagctgcttttggtgcaagtgatggtgaggtagagcttgccaaaacagtcaagaacgccactccaaaaatgtcgggaaagaacttcaatagaggctgcgatagtggtggcagacaatcttctggctctagaagtgcaaagcagccaccaagcttggttggtagcaaatgtggaacatgtggcaacattacatgccgatgcagcctgcgcactgactatcgctcctcaagtgacatatcttctgagaggtctgtaggcagagaacaaaatcatcatttgtctattgccaatgtatccggactggattgtcaagcaaaaggctcttctacatcccatatgagcaagtcagatccagagtctgatggggccgtaagtgctctggatgaggaaaccatatgtcccagttctcagcttacaaccccagttacagatgctgcttctggagaagaatggagcacacctatttttagtgttccactatcaccaaaaaaggctctccgtgctgcaatgctgaagagtcgctttgcggatactattttgaaagctcaacagaaaagtctgcttgatcaaggtaatagaagtgatccactgaagatgcaacaagaaaaggcgagattagagcggaagcagcgtgaagagaaggcaaggattgaagccgaaataagagctgcggaagctgcagcacaaaggcaggctgagcttgaattgaaggagcgacaagaaagagagagagaagaagctcgtattgcccttgaaaagatggagaggactgttgtgtttgagcagaattgctatatcttagaggaacttaaaagattagccggatataatggtggctcttggggatcacacttccgttcaccactggagcgacttggtttatttatcaaggaagagtatacagtagatgttgatgaattggaggaaggggaggaaggggagattttgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

707

Amino Acids

78.2

Weight (kDa)

9.34

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006276)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46550
fragaria_vesca	FvH4_3g06490 FvH4_3g06490 FvH4_3g06490 FvH4_3g06490 FvH4_3g25510 FvH4_3g25881 FvH4_7g09881
malus_domestica	MD05G1292900.v1.1 MD10G1268800.v1.1
prunus_persica	Prupe.4G072500_v2.0.a1
pyrus_communis	pycom05g26940 pycom10g22530
rosa_chinensis	RchiOBHm_Chr5g0012791
rosa_laevigata	RLG00000031956
rosa_multiflora	Rmu_co8165396.1_g000001 Rmu_sc0006811.1_g000013
rosa_roxburghii	Rroxscaffold_1G00063800
rosa_rugosa	Rorug05G0004000 Rorug05G0004100 Rorug05G0004200.1 Rorug05G0004300
rosa_samantha	Rh5AG098000 Rh5BG095000 Rh5CG106900 Rh5DG093700
rosa_wichuraiana	Rw5G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1479
Acc16I	TGCGCA	1 cut(s)	1382
AccBSI	CCGCTC	1 cut(s)	1795
AccI	GTMKAC	1 cut(s)	2072
AccII	CGCG	1 cut(s)	565
AccIII	TCCGGA	1 cut(s)	1469
AciI	CCGC	5 cut(s)	396, 410, 1700, 1795, 1844
AclI	AACGTT	1 cut(s)	9
AclWI	GGATC	6 cut(s)	386, 699, 770, 1517, 1751, 2026
AcsI	RAATTY	7 cut(s)	281, 515, 727, 792, 862, 1051, 1102
AcuI	CTGAAG	4 cut(s)	527, 745, 1706, 1784
AfaI	GTAC	2 cut(s)	83, 319
AfiI	CCNNNNNNNGG	3 cut(s)	223, 551, 552
AflIII	ACRYGT	1 cut(s)	1349
AjnI	CCWGG	2 cut(s)	222, 590
Alw21I	GWGCWC	5 cut(s)	344, 605, 716, 1552, 1631
Alw26I	GTCTC	3 cut(s)	411, 991, 1090
AlwI	GGATC	6 cut(s)	386, 699, 770, 1517, 1751, 2026
AlwNI	CAGNNNCTG	2 cut(s)	1532, 1607
Ama87I	CYCGRG	1 cut(s)	937
Aor13HI	TCCGGA	1 cut(s)	1469
AoxI	GGCC	4 cut(s)	183, 371, 756, 1539
ApaI	GGGCCC	1 cut(s)	375
ApoI	RAATTY	7 cut(s)	281, 515, 727, 792, 862, 1051, 1102
ArsI	GACNNNNNNTTYG	2 cut(s)	1137, 1169
AspLEI	GCGC	2 cut(s)	878, 1383
AspS9I	GGNCC	5 cut(s)	371, 372, 644, 756, 1539
AsuC2I	CCSGG	3 cut(s)	627, 938, 939
AsuHPI	GGTGA	4 cut(s)	16, 1211, 1647, 2025
AvaI	CYCGRG	1 cut(s)	937
AvaII	GGWCC	1 cut(s)	644
AxyI	CCTNAGG	1 cut(s)	649
BaeGI	GKGCMC	1 cut(s)	375
BanII	GRGCYC	3 cut(s)	375, 546, 605
BbsI	GAAGAC	2 cut(s)	32, 432
Bbv12I	GWGCWC	5 cut(s)	344, 605, 716, 1552, 1631
BbvCI	CCTCAGC	1 cut(s)	1157
BccI	CCATC	5 cut(s)	682, 952, 1190, 1529, 1927
BceAI	ACGGC	2 cut(s)	383, 1526
BciT130I	CCWGG	2 cut(s)	224, 592
BciVI	GTATCC	2 cut(s)	1477, 1696
BclI	TGATCA	1 cut(s)	1738
BcnI	CCSGG	3 cut(s)	627, 938, 939
BcoDI	GTCTC	3 cut(s)	411, 991, 1090
BfaI	CTAG	1 cut(s)	1302
BfmI	CTRYAG	2 cut(s)	1425, 1851
BfoI	RGCGCY	1 cut(s)	879
BfuI	GTATCC	2 cut(s)	1477, 1696
BlpI	GCTNAGC	1 cut(s)	1869
Bme1390I	CCNGG	5 cut(s)	224, 592, 627, 938, 939
Bme18I	GGWCC	1 cut(s)	644
BmeT110I	CYCGRG	1 cut(s)	937
BmgT120I	GGNCC	5 cut(s)	371, 372, 644, 756, 1539
BmiI	GGNNCC	6 cut(s)	215, 373, 645, 646, 666, 1540
BmrFI	CCNGG	5 cut(s)	224, 592, 627, 938, 939
BmrI	ACTGGG	3 cut(s)	1145, 1569, 1589
BmsI	GCATC	6 cut(s)	218, 256, 335, 1361, 1594, 1758
BmuI	ACTGGG	3 cut(s)	1145, 1569, 1589
BpiI	GAAGAC	2 cut(s)	32, 432
BpmI	CTGGAG	3 cut(s)	900, 1635, 2060
Bpu10I	CCTNAGC	2 cut(s)	111, 1157
Bpu1102I	GCTNAGC	1 cut(s)	1869
BpuEI	CTTGAG	1 cut(s)	1384
BpuMI	CCSGG	3 cut(s)	627, 938, 939
BsaJI	CCNNGG	6 cut(s)	223, 353, 591, 825, 936, 937
BsaWI	WCCGGW	1 cut(s)	1469
BsaXI	ACNNNNNCTCC	3 cut(s)	1379, 1409, 2105
Bsc4I	CCNNNNNNNGG	3 cut(s)	223, 551, 552
Bse1I	ACTGG	7 cut(s)	167, 770, 1151, 1479, 1575, 1595, 2043
Bse21I	CCTNAGG	1 cut(s)	649
Bse3DI	GCAATG	1 cut(s)	1686
BseAI	TCCGGA	1 cut(s)	1469
BseBI	CCWGG	2 cut(s)	224, 592
BseDI	CCNNGG	6 cut(s)	223, 353, 591, 825, 936, 937
BseGI	GGATG	5 cut(s)	233, 247, 1012, 1502, 1561
BseLI	CCNNNNNNNGG	3 cut(s)	223, 551, 552
BseMI	GCAATG	1 cut(s)	1686
BseMII	CTCAG	7 cut(s)	125, 257, 663, 1171, 1407, 1595, 1860
BseNI	ACTGG	7 cut(s)	167, 770, 1151, 1479, 1575, 1595, 2043
BseRI	GAGGAG	1 cut(s)	1387
BseSI	GKGCMC	1 cut(s)	375
Bsh1236I	CGCG	1 cut(s)	565
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	4 cut(s)	185, 373, 758, 1541
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	5 cut(s)	344, 605, 716, 1552, 1631
BsiHKCI	CYCGRG	1 cut(s)	937
BsiSI	CCGG	5 cut(s)	427, 626, 938, 1470, 1995
BslFI	GGGAC	3 cut(s)	657, 668, 1557
BslI	CCNNNNNNNGG	3 cut(s)	223, 551, 552
BsmAI	GTCTC	3 cut(s)	411, 991, 1090
BsmFI	GGGAC	3 cut(s)	657, 668, 1557
BsnI	GGCC	4 cut(s)	185, 373, 758, 1541
BsoBI	CYCGRG	1 cut(s)	937
Bsp120I	GGGCCC	1 cut(s)	371
Bsp1286I	GDGCHC	7 cut(s)	344, 375, 546, 605, 716, 1552, 1631
Bsp13I	TCCGGA	1 cut(s)	1469
Bsp1720I	GCTNAGC	1 cut(s)	1869
Bsp19I	CCATGG	1 cut(s)	825
BspACI	CCGC	5 cut(s)	396, 410, 1700, 1795, 1844
BspANI	GGCC	4 cut(s)	185, 373, 758, 1541
BspCNI	CTCAG	7 cut(s)	124, 256, 662, 1170, 1408, 1594, 1861
BspEI	TCCGGA	1 cut(s)	1469
BspFNI	CGCG	1 cut(s)	565
BspLI	GGNNCC	6 cut(s)	215, 373, 645, 646, 666, 1540
BspMAI	CTGCAG	1 cut(s)	1855
BspPI	GGATC	6 cut(s)	386, 699, 770, 1517, 1751, 2026
BspQI	GCTCTTC	1 cut(s)	1501
BsrBI	CCGCTC	1 cut(s)	1795
BsrDI	GCAATG	1 cut(s)	1686
BsrI	ACTGG	7 cut(s)	167, 770, 1151, 1479, 1575, 1595, 2043
BssECI	CCNNGG	6 cut(s)	223, 353, 591, 825, 936, 937
BssNAI	GTATAC	1 cut(s)	2073
BssT1I	CCWWGG	1 cut(s)	825
Bst1107I	GTATAC	1 cut(s)	2073
Bst2UI	CCWGG	2 cut(s)	224, 592
Bst4CI	ACNGT	6 cut(s)	81, 101, 583, 1222, 1945, 2077
Bst6I	CTCTTC	7 cut(s)	627, 632, 823, 1501, 1682, 1803, 2061
BstAPI	GCANNNNNTGC	1 cut(s)	64
BstC8I	GCNNGC	8 cut(s)	49, 137, 233, 266, 503, 1212, 1379, 1866
BstDSI	CCRYGG	1 cut(s)	825
BstF5I	GGATG	5 cut(s)	233, 247, 1012, 1502, 1561
BstFNI	CGCG	1 cut(s)	565
BstH2I	RGCGCY	1 cut(s)	879
BstHHI	GCGC	2 cut(s)	878, 1383
BstMAI	GTCTC	3 cut(s)	411, 991, 1090
BstMCI	CGRYCG	1 cut(s)	133
BstNI	CCWGG	2 cut(s)	224, 592
BstNSI	RCATGY	3 cut(s)	239, 1353, 1368
BstSCI	CCNGG	5 cut(s)	222, 590, 625, 936, 937
BstSFI	CTRYAG	2 cut(s)	1425, 1851
BstSLI	GKGCMC	1 cut(s)	375
BstUI	CGCG	1 cut(s)	565
BstV2I	GAAGAC	2 cut(s)	32, 432
BstX2I	RGATCY	1 cut(s)	1522
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstYI	RGATCY	1 cut(s)	1522
BstZ17I	GTATAC	1 cut(s)	2073
Bsu36I	CCTNAGG	1 cut(s)	649
BsuI	GTATCC	2 cut(s)	1477, 1696
BsuRI	GGCC	4 cut(s)	185, 373, 758, 1541
BtgI	CCRYGG	1 cut(s)	825
BtsCI	GGATG	5 cut(s)	233, 247, 1012, 1502, 1561
BtsIMutI	CAGTG	8 cut(s)	342, 588, 716, 731, 1143, 1383, 1760, 2036
Cac8I	GCNNGC	8 cut(s)	49, 137, 233, 266, 503, 1212, 1379, 1866
CaiI	CAGNNNCTG	2 cut(s)	1532, 1607
CfoI	GCGC	2 cut(s)	878, 1383
Cfr13I	GGNCC	5 cut(s)	371, 372, 644, 756, 1539
Cfr9I	CCCGGG	1 cut(s)	937
CseI	GACGC	1 cut(s)	110
Csp6I	GTAC	2 cut(s)	82, 318
CspCI	CAANNNNNGTGG	2 cut(s)	1308, 1343
CviAII	CATG	6 cut(s)	236, 487, 826, 922, 1350, 1365
CviQI	GTAC	2 cut(s)	82, 318
DrdI	GACNNNNNNGTC	1 cut(s)	1479
DseDI	GACNNNNNNGTC	1 cut(s)	1479
Eam1104I	CTCTTC	7 cut(s)	627, 632, 823, 1501, 1682, 1803, 2061
EarI	CTCTTC	7 cut(s)	627, 632, 823, 1501, 1682, 1803, 2061
EciI	GGCGGA	1 cut(s)	399
Ecl136II	GAGCTC	1 cut(s)	603
Eco130I	CCWWGG	1 cut(s)	825
Eco24I	GRGCYC	3 cut(s)	375, 546, 605
Eco47I	GGWCC	1 cut(s)	644
Eco53kI	GAGCTC	1 cut(s)	603
Eco57I	CTGAAG	4 cut(s)	527, 745, 1706, 1784
Eco81I	CCTNAGG	1 cut(s)	649
Eco88I	CYCGRG	1 cut(s)	937
EcoICRI	GAGCTC	1 cut(s)	603
EcoO109I	RGGNCCY	2 cut(s)	372, 644
EcoRI	GAATTC	2 cut(s)	727, 1102
EcoRII	CCWGG	2 cut(s)	222, 590
EcoT14I	CCWWGG	1 cut(s)	825
EcoT38I	GRGCYC	3 cut(s)	375, 546, 605
ErhI	CCWWGG	1 cut(s)	825
FaeI	CATG	6 cut(s)	239, 490, 829, 925, 1353, 1368
FalI	AAGNNNNNCTT	6 cut(s)	47, 79, 155, 187, 1679, 1711
FaqI	GGGAC	3 cut(s)	657, 668, 1557
FatI	CATG	6 cut(s)	235, 486, 825, 921, 1349, 1364
FauI	CCCGC	1 cut(s)	403
FauNDI	CATATG	2 cut(s)	1509, 1568
FbaI	TGATCA	1 cut(s)	1738
FblI	GTMKAC	1 cut(s)	2072
FokI	GGATG	5 cut(s)	234, 240, 1019, 1489, 1568
FriOI	GRGCYC	3 cut(s)	375, 546, 605
FspBI	CTAG	1 cut(s)	1302
FspI	TGCGCA	1 cut(s)	1382
GlaI	GCGC	2 cut(s)	877, 1382
GsuI	CTGGAG	3 cut(s)	900, 1635, 2060
HaeII	RGCGCY	1 cut(s)	879
HaeIII	GGCC	4 cut(s)	185, 373, 758, 1541
HapII	CCGG	5 cut(s)	427, 626, 938, 1470, 1995
HgaI	GACGC	1 cut(s)	110
HhaI	GCGC	2 cut(s)	878, 1383
Hin1II	CATG	6 cut(s)	239, 490, 829, 925, 1353, 1368
Hin6I	GCGC	2 cut(s)	876, 1381
HinP1I	GCGC	2 cut(s)	876, 1381
HindIII	AAGCTT	1 cut(s)	1324
HinfI	GANTC	5 cut(s)	404, 749, 1018, 1529, 1690
HpaII	CCGG	5 cut(s)	427, 626, 938, 1470, 1995
HphI	GGTGA	4 cut(s)	16, 1211, 1647, 2025
Hpy166II	GTNNAC	3 cut(s)	7, 2033, 2073
Hpy188III	TCNNGA	9 cut(s)	256, 797, 1225, 1248, 1302, 1470, 1526, 1553, 1614
Hpy8I	GTNNAC	3 cut(s)	7, 2033, 2073
Hpy99I	CGWCG	2 cut(s)	126, 404
HpyAV	CCTTC	9 cut(s)	82, 175, 697, 769, 1027, 1807, 1876, 2093, 2102
HpyCH4III	ACNGT	6 cut(s)	81, 101, 583, 1222, 1945, 2077
HpyCH4IV	ACGT	1 cut(s)	9
HpySE526I	ACGT	1 cut(s)	9
Hsp92II	CATG	6 cut(s)	239, 490, 829, 925, 1353, 1368
HspAI	GCGC	2 cut(s)	876, 1381
KflI	GGGWCCC	1 cut(s)	644
Kpn2I	TCCGGA	1 cut(s)	1469
Ksp22I	TGATCA	1 cut(s)	1738
LguI	GCTCTTC	1 cut(s)	1501
LmnI	GCTCC	7 cut(s)	219, 670, 1175, 1400, 1626, 1885, 2041
LweI	GCATC	6 cut(s)	218, 256, 335, 1361, 1594, 1758
MaeI	CTAG	1 cut(s)	1302
MaeII	ACGT	1 cut(s)	9
MaeIII	GTNAC	5 cut(s)	73, 125, 566, 1403, 1597
MbiI	CCGCTC	1 cut(s)	1795
MflI	RGATCY	1 cut(s)	1522
MhlI	GDGCHC	7 cut(s)	344, 375, 546, 605, 716, 1552, 1631
MlyI	GAGTC	5 cut(s)	413, 743, 1027, 1538, 1699
MmeI	TCCRAC	1 cut(s)	1153
MroI	TCCGGA	1 cut(s)	1469
MseI	TTAA	2 cut(s)	1068, 1983
MslI	CAYNNNNRTG	1 cut(s)	1369
MspA1I	CMGCKG	1 cut(s)	893
MspI	CCGG	5 cut(s)	427, 626, 938, 1470, 1995
MspR9I	CCNGG	5 cut(s)	224, 592, 627, 938, 939
MvaI	CCWGG	2 cut(s)	224, 592
MvnI	CGCG	1 cut(s)	565
NciI	CCSGG	3 cut(s)	627, 938, 939
NcoI	CCATGG	1 cut(s)	825
NdeI	CATATG	2 cut(s)	1509, 1568
NlaIII	CATG	6 cut(s)	239, 490, 829, 925, 1353, 1368
NlaIV	GGNNCC	6 cut(s)	215, 373, 645, 646, 666, 1540
NmuCI	GTSAC	2 cut(s)	566, 1403
NsbI	TGCGCA	1 cut(s)	1382
NspI	RCATGY	3 cut(s)	239, 1353, 1368
PciI	ACATGT	1 cut(s)	1349
PciSI	GCTCTTC	1 cut(s)	1501
Ple19I	CGATCG	1 cut(s)	133
PleI	GAGTC	5 cut(s)	412, 743, 1026, 1537, 1698
PpsI	GAGTC	5 cut(s)	412, 743, 1026, 1537, 1698
PpuMI	RGGWCCY	1 cut(s)	644
PscI	ACATGT	1 cut(s)	1349
Psp124BI	GAGCTC	1 cut(s)	605
Psp1406I	AACGTT	1 cut(s)	9
Psp5II	RGGWCCY	1 cut(s)	644
Psp6I	CCWGG	2 cut(s)	222, 590
PspGI	CCWGG	2 cut(s)	222, 590
PspN4I	GGNNCC	6 cut(s)	215, 373, 645, 646, 666, 1540
PspOMI	GGGCCC	1 cut(s)	371
PspPI	GGNCC	5 cut(s)	371, 372, 644, 756, 1539
PspPPI	RGGWCCY	1 cut(s)	644
PstI	CTGCAG	1 cut(s)	1855
PstNI	CAGNNNCTG	2 cut(s)	1532, 1607
PsuI	RGATCY	1 cut(s)	1522
PvuI	CGATCG	1 cut(s)	133
PvuII	CAGCTG	1 cut(s)	893
RsaI	GTAC	2 cut(s)	83, 319
RsaNI	GTAC	2 cut(s)	82, 318
RseI	CAYNNNNRTG	1 cut(s)	1369
SacI	GAGCTC	1 cut(s)	605
SapI	GCTCTTC	1 cut(s)	1501
SaqAI	TTAA	2 cut(s)	1068, 1983
Sau96I	GGNCC	5 cut(s)	371, 372, 644, 756, 1539
SchI	GAGTC	5 cut(s)	413, 743, 1027, 1538, 1699
ScrFI	CCNGG	5 cut(s)	224, 592, 627, 938, 939
SduI	GDGCHC	7 cut(s)	344, 375, 546, 605, 716, 1552, 1631
SfaNI	GCATC	6 cut(s)	218, 256, 335, 1361, 1594, 1758
SfcI	CTRYAG	2 cut(s)	1425, 1851
SinI	GGWCC	1 cut(s)	644
SmaI	CCCGGG	1 cut(s)	939
SmiMI	CAYNNNNRTG	1 cut(s)	1369
SmlI	CTYRAG	1 cut(s)	1399
SmoI	CTYRAG	1 cut(s)	1399
SsiI	CCGC	5 cut(s)	396, 410, 1700, 1795, 1844
SspMI	CTAG	1 cut(s)	1302
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	5 cut(s)	222, 590, 625, 936, 937
StyI	CCWWGG	1 cut(s)	825
TaaI	ACNGT	6 cut(s)	81, 101, 583, 1222, 1945, 2077
TaiI	ACGT	1 cut(s)	12
TaqI	TCGA	2 cut(s)	402, 1031
TatI	WGTACW	1 cut(s)	81
Tru1I	TTAA	2 cut(s)	1068, 1983
Tru9I	TTAA	2 cut(s)	1068, 1983
TscAI	CASTG	8 cut(s)	342, 588, 716, 738, 1143, 1390, 1767, 2043
TseFI	GTSAC	2 cut(s)	566, 1403
Tsp45I	GTSAC	2 cut(s)	566, 1403
TspDTI	ATGAA	4 cut(s)	406, 941, 1004, 2103
TspGWI	ACGGA	2 cut(s)	1661, 2018
TspMI	CCCGGG	1 cut(s)	937
TspRI	CASTG	8 cut(s)	342, 588, 716, 738, 1143, 1390, 1767, 2043
VpaK11BI	GGWCC	1 cut(s)	644
XapI	RAATTY	7 cut(s)	281, 515, 727, 792, 862, 1051, 1102
XbaI	TCTAGA	1 cut(s)	1301
XceI	RCATGY	3 cut(s)	239, 1353, 1368
XmaI	CCCGGG	1 cut(s)	937
XmiI	GTMKAC	1 cut(s)	2072
XspI	CTAG	1 cut(s)	1302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.