Huntingtin-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101441 RchiOBHm_Chr5g0023271 |
| rosa_laevigata | RLG00000003196 |
| rosa_multiflora | Rmu_sc0000854.1_g000060 Rmu_sc0002079.1_g000029 Rmu_sc0002416.1_g000019 Rmu_sc0007310.1_g000004 Rmu_sc0011008.1_g000001 Rmu_sc0024464.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00035670 |
| rosa_samantha | Rh1AG220800 Rh2CG152900 Rh3DG314600 Rh6AG050000 Rh6AG411400 Rh7AG053400 Rh7DG427000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 94 |
| AclWI | GGATC | 1 cut(s) | 44 |
| AfaI | GTAC | 1 cut(s) | 208 |
| AgsI | TTSAA | 1 cut(s) | 268 |
| AluBI | AGCT | 3 cut(s) | 85, 112, 179 |
| AluI | AGCT | 3 cut(s) | 85, 112, 179 |
| AlwI | GGATC | 1 cut(s) | 44 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApeKI | GCWGC | 1 cut(s) | 58 |
| BbvI | GCAGC | 1 cut(s) | 70 |
| BccI | CCATC | 1 cut(s) | 254 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 58, 92 |
| BisI | GCNGC | 1 cut(s) | 59 |
| BlsI | GCNGC | 1 cut(s) | 60 |
| BmsI | GCATC | 1 cut(s) | 105 |
| BsaJI | CCNNGG | 2 cut(s) | 48, 138 |
| Bse3DI | GCAATG | 1 cut(s) | 147 |
| BseDI | CCNNGG | 2 cut(s) | 48, 138 |
| BseMI | GCAATG | 1 cut(s) | 147 |
| BseMII | CTCAG | 1 cut(s) | 174 |
| BseXI | GCAGC | 1 cut(s) | 70 |
| BseYI | CCCAGC | 1 cut(s) | 259 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp143I | GATC | 3 cut(s) | 36, 103, 216 |
| Bsp19I | CCATGG | 1 cut(s) | 138 |
| BspACI | CCGC | 1 cut(s) | 94 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspCNI | CTCAG | 1 cut(s) | 173 |
| BspPI | GGATC | 1 cut(s) | 44 |
| BsrDI | GCAATG | 1 cut(s) | 147 |
| BssECI | CCNNGG | 2 cut(s) | 48, 138 |
| BssMI | GATC | 3 cut(s) | 36, 103, 216 |
| BssT1I | CCWWGG | 2 cut(s) | 48, 138 |
| Bst4CI | ACNGT | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 1 cut(s) | 110 |
| BstDEI | CTNAG | 1 cut(s) | 160 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstKTI | GATC | 3 cut(s) | 39, 106, 219 |
| BstMBI | GATC | 3 cut(s) | 36, 103, 216 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 70 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtgZI | GCGATG | 1 cut(s) | 243 |
| Cac8I | GCNNGC | 1 cut(s) | 110 |
| Csp6I | GTAC | 1 cut(s) | 207 |
| CviAII | CATG | 2 cut(s) | 139, 225 |
| CviJI | RGCY | 7 cut(s) | 74, 85, 112, 137, 143, 167, 179 |
| CviKI_1 | RGCY | 7 cut(s) | 74, 85, 112, 137, 143, 167, 179 |
| CviQI | GTAC | 1 cut(s) | 207 |
| DdeI | CTNAG | 1 cut(s) | 160 |
| DpnI | GATC | 3 cut(s) | 38, 105, 218 |
| DpnII | GATC | 3 cut(s) | 36, 103, 216 |
| Eco130I | CCWWGG | 2 cut(s) | 48, 138 |
| EcoT14I | CCWWGG | 2 cut(s) | 48, 138 |
| ErhI | CCWWGG | 2 cut(s) | 48, 138 |
| FaeI | CATG | 2 cut(s) | 142, 228 |
| FaiI | YATR | 4 cut(s) | 140, 182, 226, 254 |
| FatI | CATG | 2 cut(s) | 138, 224 |
| Fnu4HI | GCNGC | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 1 cut(s) | 59 |
| GluI | GCNGC | 1 cut(s) | 59 |
| GsaI | CCCAGC | 1 cut(s) | 263 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| Hin1II | CATG | 2 cut(s) | 142, 228 |
| HinfI | GANTC | 3 cut(s) | 44, 116, 126 |
| Hpy188I | TCNGA | 3 cut(s) | 8, 18, 163 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyAV | CCTTC | 3 cut(s) | 17, 85, 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 211 |
| HpyCH4V | TGCA | 1 cut(s) | 58 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| HpyF3I | CTNAG | 1 cut(s) | 160 |
| Hsp92II | CATG | 2 cut(s) | 142, 228 |
| Kzo9I | GATC | 3 cut(s) | 36, 103, 216 |
| LpnPI | CCDG | 4 cut(s) | 122, 143, 245, 270 |
| Lsp1109I | GCAGC | 1 cut(s) | 70 |
| LweI | GCATC | 1 cut(s) | 105 |
| MalI | GATC | 3 cut(s) | 38, 105, 218 |
| MboI | GATC | 3 cut(s) | 36, 103, 216 |
| MboII | GAAGA | 2 cut(s) | 113, 226 |
| MluCI | AATT | 5 cut(s) | 27, 200, 240, 268, 305 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MnlI | CCTC | 4 cut(s) | 34, 169, 183, 274 |
| MseI | TTAA | 1 cut(s) | 299 |
| MslI | CAYNNNNRTG | 1 cut(s) | 251 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NcoI | CCATGG | 1 cut(s) | 138 |
| NdeII | GATC | 3 cut(s) | 36, 103, 216 |
| NlaIII | CATG | 2 cut(s) | 142, 228 |
| PfeI | GAWTC | 2 cut(s) | 116, 126 |
| PkrI | GCNGC | 1 cut(s) | 60 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspFI | CCCAGC | 1 cut(s) | 259 |
| RsaI | GTAC | 1 cut(s) | 208 |
| RsaNI | GTAC | 1 cut(s) | 207 |
| RseI | CAYNNNNRTG | 1 cut(s) | 251 |
| SaqAI | TTAA | 1 cut(s) | 299 |
| SatI | GCNGC | 1 cut(s) | 59 |
| Sau3AI | GATC | 3 cut(s) | 36, 103, 216 |
| SchI | GAGTC | 1 cut(s) | 38 |
| SetI | ASST | 4 cut(s) | 87, 114, 161, 181 |
| SfaNI | GCATC | 1 cut(s) | 105 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 251 |
| Sse9I | AATT | 5 cut(s) | 27, 200, 240, 268, 305 |
| SsiI | CCGC | 1 cut(s) | 94 |
| StyI | CCWWGG | 2 cut(s) | 48, 138 |
| TaaI | ACNGT | 1 cut(s) | 211 |
| TaqI | TCGA | 5 cut(s) | 39, 78, 99, 114, 119 |
| TasI | AATT | 5 cut(s) | 27, 200, 240, 268, 305 |
| TfiI | GAWTC | 2 cut(s) | 116, 126 |
| Tru1I | TTAA | 1 cut(s) | 299 |
| Tru9I | TTAA | 1 cut(s) | 299 |
| TseI | GCWGC | 1 cut(s) | 58 |