Huntingtin-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101441 RchiOBHm_Chr5g0023271 |
| rosa_laevigata | RLG00000003196 |
| rosa_multiflora | Rmu_sc0000854.1_g000060 Rmu_sc0002079.1_g000029 Rmu_sc0002416.1_g000019 Rmu_sc0007310.1_g000004 Rmu_sc0011008.1_g000001 Rmu_sc0024464.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00035670 |
| rosa_samantha | Rh1AG220800 Rh2CG152900 Rh3DG314600 Rh6AG050000 Rh6AG411400 Rh7AG053400 Rh7DG427000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 171 |
| AclWI | GGATC | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 70 |
| AgsI | TTSAA | 1 cut(s) | 196 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| AlwI | GGATC | 1 cut(s) | 167 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| BccI | CCATC | 2 cut(s) | 116, 184 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| Bse3DI | GCAATG | 1 cut(s) | 9 |
| BseMI | GCAATG | 1 cut(s) | 9 |
| BseYI | CCCAGC | 1 cut(s) | 121 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| Bsp143I | GATC | 2 cut(s) | 78, 172 |
| Bsp68I | TCGCGA | 1 cut(s) | 171 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BsrDI | GCAATG | 1 cut(s) | 9 |
| BssMI | GATC | 2 cut(s) | 78, 172 |
| Bst4CI | ACNGT | 3 cut(s) | 73, 140, 192 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstKTI | GATC | 2 cut(s) | 81, 175 |
| BstMBI | GATC | 2 cut(s) | 78, 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BtgZI | GCGATG | 2 cut(s) | 105, 152 |
| BtsIMutI | CAGTG | 2 cut(s) | 145, 188 |
| BtuMI | TCGCGA | 1 cut(s) | 171 |
| Csp6I | GTAC | 1 cut(s) | 69 |
| CviAII | CATG | 1 cut(s) | 87 |
| CviJI | RGCY | 2 cut(s) | 5, 41 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 41 |
| CviQI | GTAC | 1 cut(s) | 69 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 2 cut(s) | 80, 174 |
| DpnII | GATC | 2 cut(s) | 78, 172 |
| FaeI | CATG | 1 cut(s) | 90 |
| FaiI | YATR | 5 cut(s) | 44, 88, 116, 205, 213 |
| FatI | CATG | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GluI | GCNGC | 1 cut(s) | 15 |
| GsaI | CCCAGC | 1 cut(s) | 125 |
| Hin1II | CATG | 1 cut(s) | 90 |
| Hpy188III | TCNNGA | 1 cut(s) | 170 |
| HpyAV | CCTTC | 1 cut(s) | 192 |
| HpyCH4III | ACNGT | 3 cut(s) | 73, 140, 192 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| Hsp92II | CATG | 1 cut(s) | 90 |
| Kzo9I | GATC | 2 cut(s) | 78, 172 |
| LpnPI | CCDG | 2 cut(s) | 107, 132 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MaeIII | GTNAC | 1 cut(s) | 186 |
| MalI | GATC | 2 cut(s) | 80, 174 |
| MboI | GATC | 2 cut(s) | 78, 172 |
| MboII | GAAGA | 1 cut(s) | 88 |
| MluCI | AATT | 4 cut(s) | 62, 102, 130, 217 |
| MnlI | CCTC | 3 cut(s) | 45, 136, 172 |
| MseI | TTAA | 2 cut(s) | 129, 220 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NdeII | GATC | 2 cut(s) | 78, 172 |
| NlaIII | CATG | 1 cut(s) | 90 |
| NmuCI | GTSAC | 1 cut(s) | 186 |
| NruI | TCGCGA | 1 cut(s) | 171 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PspFI | CCCAGC | 1 cut(s) | 121 |
| RruI | TCGCGA | 1 cut(s) | 171 |
| RsaI | GTAC | 1 cut(s) | 70 |
| RsaNI | GTAC | 1 cut(s) | 69 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SaqAI | TTAA | 2 cut(s) | 129, 220 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 2 cut(s) | 78, 172 |
| SetI | ASST | 2 cut(s) | 23, 43 |
| SgeI | CNNG | 6 cut(s) | 99, 134, 159, 165, 182, 208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| Sse9I | AATT | 4 cut(s) | 62, 102, 130, 217 |
| SspMI | CTAG | 1 cut(s) | 153 |
| TaaI | ACNGT | 3 cut(s) | 73, 140, 192 |
| TaqI | TCGA | 1 cut(s) | 30 |
| TasI | AATT | 4 cut(s) | 62, 102, 130, 217 |
| Tru1I | TTAA | 2 cut(s) | 129, 220 |
| Tru9I | TTAA | 2 cut(s) | 129, 220 |
| TscAI | CASTG | 2 cut(s) | 145, 195 |
| TseFI | GTSAC | 1 cut(s) | 186 |
| TseI | GCWGC | 1 cut(s) | 14 |
| Tsp45I | GTSAC | 1 cut(s) | 186 |
| TspRI | CASTG | 2 cut(s) | 145, 195 |
| XspI | CTAG | 1 cut(s) | 153 |